BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00012860
         (464 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013699214.1| PREDICTED: TATA box-binding protein-associat...    64   6e-08
ref|XP_013602202.1| PREDICTED: TATA box-binding protein-associat...    62   2e-07
ref|XP_013701835.1| PREDICTED: TATA box-binding protein-associat...    61   3e-07
ref|XP_010527902.1| PREDICTED: TATA box-binding protein-associat...    61   3e-07
ref|XP_010527901.1| PREDICTED: TATA box-binding protein-associat...    61   3e-07
ref|XP_010527900.1| PREDICTED: TATA box-binding protein-associat...    61   3e-07
ref|XP_010258361.1| PREDICTED: TATA box-binding protein-associat...    60   6e-07
ref|XP_010258357.1| PREDICTED: TATA box-binding protein-associat...    60   6e-07
ref|XP_006340292.1| PREDICTED: TATA box-binding protein-associat...    60   8e-07
ref|XP_013664834.1| PREDICTED: TATA box-binding protein-associat...    59   2e-06
emb|CDY10079.1| BnaC08g43720D [Brassica napus]                         58   2e-06
ref|XP_009118673.1| PREDICTED: TATA box-binding protein-associat...    58   3e-06
ref|XP_004251201.1| PREDICTED: TATA box-binding protein-associat...    58   3e-06

>ref|XP_013699214.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like [Brassica napus]
          Length = 657

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 15/118 (12%)
 Frame = -1

Query: 341 MDLNR-IC-GCGNEEFEESNGFYYCTQCCVQVQGMCATAVGDEADLYG------TYSQSS 186
           M+ N+ IC GC N+EFEE +GF+YC QC V+   + ATAV DE D  G      TYSQ +
Sbjct: 1   METNKMICNGCDNDEFEEEDGFFYCLQCGVRADDIIATAVDDE-DFVGDGRGGATYSQLN 59

Query: 185 RR-----PAAVVERETQESEFWRQLRQDKPKNDDEQMKPYVPADSGSSVGI--SPEDY 33
            R     P A+   + +E+  + Q R  + K+  +  +P      G+ VG+   PED+
Sbjct: 60  TRRVTTQPTAIPSHQLEETNRYSQFR-SQLKSASKITQPNGGVGGGNDVGVPTDPEDF 116


>ref|XP_013602202.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B [Brassica oleracea var. oleracea]
          Length = 656

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 15/118 (12%)
 Frame = -1

Query: 341 MDLNR-IC-GCGNEEFEESNGFYYCTQCCVQVQGMCATAVGDEADLYG------TYSQSS 186
           M+ N+ IC GC N+EFEE +GF+YC QC V+   + ATAV DE D  G      TYSQ +
Sbjct: 1   METNKMICNGCDNDEFEEEDGFFYCLQCGVRADDIIATAVDDE-DFVGDGRGGATYSQLN 59

Query: 185 RR-----PAAVVERETQESEFWRQLRQDKPKNDDEQMKPYVPADSGSSVGI--SPEDY 33
            R     P A   +  +E+  + Q R  + K+  +  +P      G+ VG+   PED+
Sbjct: 60  TRRVTTQPTATPSQHLEETNRYSQFR-SQLKSASKITQPNGGGGGGNDVGVPTDPEDF 116


>ref|XP_013701835.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like [Brassica napus]
          Length = 657

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 15/118 (12%)
 Frame = -1

Query: 341 MDLNR-IC-GCGNEEFEESNGFYYCTQCCVQVQGMCATAVGDEADLYG------TYSQSS 186
           M+ N+ IC GC N+EFEE +GF+YC QC V+   + A AV DE D  G      TYSQ +
Sbjct: 1   METNKMICNGCDNDEFEEEDGFFYCLQCGVRADDIIAPAVDDE-DFVGDGRGGATYSQLN 59

Query: 185 RR-----PAAVVERETQESEFWRQLRQDKPKNDDEQMKPYVPADSGSSVGI--SPEDY 33
            R     P A+   + +E+  + Q R  + K+  +  +P      G+ VG+   PED+
Sbjct: 60  TRRVTTQPTAIPSHQLEETNRYSQFR-SQLKSASKITQPNGGVGGGNDVGVPTDPEDF 116


>ref|XP_010527902.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X3 [Tarenaya hassleriana]
          Length = 612

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 46/136 (33%), Positives = 59/136 (43%), Gaps = 24/136 (17%)
 Frame = -1

Query: 338 DLNR-ICG-CGNEEFEESNGFYYCTQCCVQVQGMCATAVGDE------ADLYGTYSQSSR 183
           DL++ IC  CG   FEES GFY+C QC  +   +  T VGDE       D  G   Q++ 
Sbjct: 5   DLSKMICNNCGYAGFEESEGFYHCIQCGTRADDVMDTGVGDEDFVGNNGDTRGAIYQATN 64

Query: 182 -------------RPAAVVERETQESEFWRQLRQDKPKNDDEQMKPYVPADSGS---SVG 51
                        +P    E   Q S+FW             Q +P  PAD GS   +V 
Sbjct: 65  TRQRPSQPMTQPTQPTLATEETQQHSQFW------------SQFEPTEPADFGSGTETVT 112

Query: 50  ISPEDYANELRMTYTM 3
           I+ EDY  E+R  Y M
Sbjct: 113 ITSEDYYREVRKRYVM 128


>ref|XP_010527901.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X2 [Tarenaya hassleriana]
          Length = 691

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 46/136 (33%), Positives = 59/136 (43%), Gaps = 24/136 (17%)
 Frame = -1

Query: 338 DLNR-ICG-CGNEEFEESNGFYYCTQCCVQVQGMCATAVGDE------ADLYGTYSQSSR 183
           DL++ IC  CG   FEES GFY+C QC  +   +  T VGDE       D  G   Q++ 
Sbjct: 5   DLSKMICNNCGYAGFEESEGFYHCIQCGTRADDVMDTGVGDEDFVGNNGDTRGAIYQATN 64

Query: 182 -------------RPAAVVERETQESEFWRQLRQDKPKNDDEQMKPYVPADSGS---SVG 51
                        +P    E   Q S+FW             Q +P  PAD GS   +V 
Sbjct: 65  TRQRPSQPMTQPTQPTLATEETQQHSQFW------------SQFEPTEPADFGSGTETVT 112

Query: 50  ISPEDYANELRMTYTM 3
           I+ EDY  E+R  Y M
Sbjct: 113 ITSEDYYREVRKRYVM 128


>ref|XP_010527900.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X1 [Tarenaya hassleriana]
          Length = 692

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 46/136 (33%), Positives = 59/136 (43%), Gaps = 24/136 (17%)
 Frame = -1

Query: 338 DLNR-ICG-CGNEEFEESNGFYYCTQCCVQVQGMCATAVGDE------ADLYGTYSQSSR 183
           DL++ IC  CG   FEES GFY+C QC  +   +  T VGDE       D  G   Q++ 
Sbjct: 5   DLSKMICNNCGYAGFEESEGFYHCIQCGTRADDVMDTGVGDEDFVGNNGDTRGAIYQATN 64

Query: 182 -------------RPAAVVERETQESEFWRQLRQDKPKNDDEQMKPYVPADSGS---SVG 51
                        +P    E   Q S+FW             Q +P  PAD GS   +V 
Sbjct: 65  TRQRPSQPMTQPTQPTLATEETQQHSQFW------------SQFEPTEPADFGSGTETVT 112

Query: 50  ISPEDYANELRMTYTM 3
           I+ EDY  E+R  Y M
Sbjct: 113 ITSEDYYREVRKRYVM 128


>ref|XP_010258361.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X2 [Nelumbo nucifera]
          Length = 738

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 45/142 (31%), Positives = 63/142 (44%), Gaps = 37/142 (26%)
 Frame = -1

Query: 317 CGNEEFEESN-GFYYCTQCCVQVQGMCATAVGDE-----ADLYGT-YSQSSRR------- 180
           CGN   +  N GFYYC +C  Q + +  T V DE      D  G  Y+   RR       
Sbjct: 10  CGNVGLDSCNDGFYYCLRCGSQAEDIVETGVADEDFLDKGDARGAIYTAGHRRHKFQRQT 69

Query: 179 -----------PAAVVERETQESEFWRQLRQD-----------KPKNDDEQMKPYVPAD- 69
                      P       TQ+S+FW+ L              K + D E+M+P VP D 
Sbjct: 70  VIKVEPLSQSQPPYYQTPHTQQSQFWKSLGLSEEHPIHKAVIKKEEPDYEEMRPSVPNDF 129

Query: 68  SGSSVGISPEDYANELRMTYTM 3
           + +S G+SPEDY +++R+ Y M
Sbjct: 130 ASTSRGLSPEDYYSQVRVRYVM 151


>ref|XP_010258357.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B isoform X1 [Nelumbo nucifera]
           gi|720007612|ref|XP_010258358.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B isoform X1 [Nelumbo nucifera]
           gi|720007615|ref|XP_010258359.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B isoform X1 [Nelumbo nucifera]
           gi|720007618|ref|XP_010258360.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B isoform X1 [Nelumbo nucifera]
          Length = 739

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 45/142 (31%), Positives = 63/142 (44%), Gaps = 37/142 (26%)
 Frame = -1

Query: 317 CGNEEFEESN-GFYYCTQCCVQVQGMCATAVGDE-----ADLYGT-YSQSSRR------- 180
           CGN   +  N GFYYC +C  Q + +  T V DE      D  G  Y+   RR       
Sbjct: 10  CGNVGLDSCNDGFYYCLRCGSQAEDIVETGVADEDFLDKGDARGAIYTAGHRRHKFQRQT 69

Query: 179 -----------PAAVVERETQESEFWRQLRQD-----------KPKNDDEQMKPYVPAD- 69
                      P       TQ+S+FW+ L              K + D E+M+P VP D 
Sbjct: 70  VIKVEPLSQSQPPYYQTPHTQQSQFWKSLGLSEEHPIHKAVIKKEEPDYEEMRPSVPNDF 129

Query: 68  SGSSVGISPEDYANELRMTYTM 3
           + +S G+SPEDY +++R+ Y M
Sbjct: 130 ASTSRGLSPEDYYSQVRVRYVM 151


>ref|XP_006340292.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like isoform X1 [Solanum
           tuberosum] gi|565346503|ref|XP_006340293.1| PREDICTED:
           TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like isoform X2 [Solanum
           tuberosum]
          Length = 652

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
 Frame = -1

Query: 335 LNRICG-CGNEEFEES-NGFYYCTQCCVQVQGMCATAVGDEADLY----GTYSQSSRRPA 174
           + R C  CGN  F++  +GF+YCT+C  Q   +  T V D+ DL+    G YS S RR  
Sbjct: 5   IQRCCEVCGNLSFDDGGDGFFYCTRCGSQAVDIMDTGVDDD-DLFNVDGGMYSTSQRRQY 63

Query: 173 AVVERE--------TQESEFWRQLRQDKPKNDDEQMKPYVPADSGSS-VGISPEDYANEL 21
             V +         +Q  E  +       +N D+ + P VP+D GSS + ++  DY +E+
Sbjct: 64  CQVSQPVPISQVQLSQHLETLKTFDDYDERNGDDGVGPAVPSDFGSSQISLTYTDYYSEI 123

Query: 20  RMTYTM 3
           R+ Y M
Sbjct: 124 RLRYVM 129


>ref|XP_013664834.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like [Brassica napus]
          Length = 655

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 17/120 (14%)
 Frame = -1

Query: 341 MDLNR-IC-GCGNEEFEESNGFYYCTQCCVQVQGMCATAVGDE--------ADLYGTYSQ 192
           M+ N+ IC GC N+EFEE +GF+YC QC V+   + ATAV DE          + GTYSQ
Sbjct: 1   METNKMICNGCDNDEFEEEDGFFYCLQCGVRADDVIATAVEDEDFAGDGGGTRVGGTYSQ 60

Query: 191 SSRR-----PAAVVERETQESEFWRQLRQDKPKNDDEQMKPYVPADSGSSVGI--SPEDY 33
            + R     P A   +  +E+  + Q R  + K+  +  +P    + G  VG+   PED+
Sbjct: 61  LNIRRVTTQPTATPSQHLEETNRYSQFR-SQLKSASKITQP----NGGGDVGVPTDPEDF 115


>emb|CDY10079.1| BnaC08g43720D [Brassica napus]
          Length = 106

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 21/106 (19%)
 Frame = -1

Query: 341 MDLNR-IC-GCGNEEFEESNGFYYCTQCCVQVQGMCATAVGDEADLYG------TYSQSS 186
           M+ N+ IC GC N+EFEE +GF+YC QC V+   + ATAV DE D  G      TYSQ +
Sbjct: 1   METNKMICNGCDNDEFEEEDGFFYCLQCGVRADDIIATAVDDE-DFVGDGRGGATYSQLN 59

Query: 185 RR-----PAAVVERETQESEFWRQLRQD--------KPKNDDEQMK 87
            R     P A+   + +E+  + Q R          +P   +E+ K
Sbjct: 60  TRRVTTQPTAIPSHQLEETNRYSQFRSQLKSASKITQPNGGEEEKK 105


>ref|XP_009118673.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B [Brassica rapa]
          Length = 654

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 45/124 (36%), Positives = 61/124 (49%), Gaps = 18/124 (14%)
 Frame = -1

Query: 341 MDLNR-IC-GCGNEEFEESNGFYYCTQCCVQVQGMCATAVGDE--------ADLYGTYSQ 192
           M+ N+ IC GC N+EFEE +GF+YC QC V+   + ATAV DE          + GTYSQ
Sbjct: 1   METNKMICNGCDNDEFEEEDGFFYCLQCGVRADDVIATAVEDEDFAGDGGGTRVGGTYSQ 60

Query: 191 SSRR-----PAAVVERETQESEFWRQLR-QDKPKNDDEQMKPYVPADSGSSVG--ISPED 36
            + R     P A   +  +E+  + Q R Q K  +   Q+        G  VG    PED
Sbjct: 61  LNIRRVTTQPTATPSQHLEETNRYSQFRSQLKSASKITQLN-----GGGGDVGEPTDPED 115

Query: 35  YANE 24
           +  E
Sbjct: 116 FGGE 119


>ref|XP_004251201.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B [Solanum lycopersicum]
           gi|723746129|ref|XP_010313464.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B [Solanum lycopersicum]
           gi|723746132|ref|XP_010313465.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B [Solanum lycopersicum]
           gi|723746135|ref|XP_010313466.1| PREDICTED: TATA
           box-binding protein-associated factor RNA polymerase I
           subunit B [Solanum lycopersicum]
          Length = 652

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
 Frame = -1

Query: 335 LNRICG-CGNEEFEES-NGFYYCTQCCVQVQGMCATAVGDEADLY----GTYSQSSRR-- 180
           + R C  CGN  F++  +GF+YCT+C  Q   +  T V D+ DL+    G YS S RR  
Sbjct: 5   IQRCCEVCGNLSFDDGGDGFFYCTRCGSQAVDIMDTGVDDD-DLFNVDGGMYSTSQRRQY 63

Query: 179 -----PAAVVERE-TQESEFWRQLRQDKPKNDDEQMKPYVPADSGSS-VGISPEDYANEL 21
                P  + + + +Q  E  +        N D+ + P VP+D GSS + ++  DY +E+
Sbjct: 64  CQVIQPVPISQVQLSQHLETLKTFDDYDEHNGDDGVGPAVPSDFGSSQISLTYTDYYSEI 123

Query: 20  RMTYTM 3
           R+ Y M
Sbjct: 124 RLRYVM 129