BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00007920
         (4100 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V sub...  1766   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V sub...  1709   0.0  
ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V sub...  1663   0.0  
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...  1654   0.0  
ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V sub...  1654   0.0  
ref|XP_008231662.1| PREDICTED: DNA-directed RNA polymerase V sub...  1652   0.0  
ref|XP_009361958.1| PREDICTED: DNA-directed RNA polymerase V sub...  1652   0.0  
ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V sub...  1650   0.0  
ref|XP_011020393.1| PREDICTED: DNA-directed RNA polymerase V sub...  1649   0.0  
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...  1648   0.0  
ref|XP_010032299.1| PREDICTED: DNA-directed RNA polymerase V sub...  1627   0.0  
ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V sub...  1624   0.0  
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...  1623   0.0  
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...  1623   0.0  
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...  1621   0.0  
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...  1620   0.0  
ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V sub...  1618   0.0  
gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium r...  1618   0.0  
gb|KJB67888.1| hypothetical protein B456_010G216600 [Gossypium r...  1618   0.0  
ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V sub...  1618   0.0  

>ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
            gi|720093477|ref|XP_010246064.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Nelumbo nucifera]
            gi|720093480|ref|XP_010246066.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Nelumbo nucifera]
          Length = 1908

 Score = 1766 bits (4575), Expect = 0.0
 Identities = 879/1335 (65%), Positives = 1065/1335 (79%), Gaps = 8/1335 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEE+  S +  +G +T I+F+LA+ QEICTSS++DCPISHPSQLTNPFLGLPLE G CES
Sbjct: 1    MEEDHLSTITLDGEITGIRFNLATSQEICTSSVNDCPISHPSQLTNPFLGLPLEYGNCES 60

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQIRKNG--EKDK 3655
            CGT+EPG+C+GHFGYIQLP+P+YHP H+ ELK +L +ICLKCLRMK  ++++    E+  
Sbjct: 61   CGTSEPGKCEGHFGYIQLPVPIYHPCHVSELKHILDLICLKCLRMKMRKVKETSGTERSS 120

Query: 3654 SSACTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTL 3478
            S+ C++C D+P ++++E    DG+  LELK+  +S+ ++  WNFLERYGF YG    RTL
Sbjct: 121  SAPCSYCPDLPQLSIKEVKTTDGACYLELKISSRSRSQDGFWNFLERYGFRYGDGSQRTL 180

Query: 3477 LPCEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVS 3298
            LP E LEILKRI  ET++KL  KG+FPQ GYILQ LPVPPNCLSVPDISDG +IMSSD+S
Sbjct: 181  LPSESLEILKRIPEETRRKLIGKGHFPQYGYILQYLPVPPNCLSVPDISDGISIMSSDLS 240

Query: 3297 VSMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGV 3118
            ++ML+KVLKQ EII+SSRSG PNFES E+EANELQS +A YLHVRG+ K  R + ++F V
Sbjct: 241  ITMLRKVLKQIEIIRSSRSGAPNFESQEIEANELQSTVANYLHVRGTAKASRDVDTRFSV 300

Query: 3117 NNESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKV 2938
            +   +DT  KAW+EKM+TLFISKGSGFSSRSVITGDAYK ++EIGLPSE+AQ+ITFEEKV
Sbjct: 301  SKGVNDTCTKAWLEKMRTLFISKGSGFSSRSVITGDAYKGINEIGLPSEVAQRITFEEKV 360

Query: 2937 TVHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRP 2758
            ++HNM+HLQ+LVD KLCLTY DG S YSL++GSKG+TSL+VGQVV RRIMDGDIVFINRP
Sbjct: 361  SIHNMDHLQKLVDNKLCLTYTDGLSTYSLRDGSKGYTSLRVGQVVRRRIMDGDIVFINRP 420

Query: 2757 PSTHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSV 2578
            PSTHKHSLQAFSVY+HD+HTVK+NPLIC PLGADFDGDC+HLFYPQSL AK+EVLELF+V
Sbjct: 421  PSTHKHSLQAFSVYVHDDHTVKVNPLICGPLGADFDGDCVHLFYPQSLEAKSEVLELFAV 480

Query: 2577 EQQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGP 2398
            + QLLSSHSG LNLQLAND+LLSL I+FK++F  KA++QQL M+V  GL  PALLKA   
Sbjct: 481  QHQLLSSHSGNLNLQLANDSLLSLNILFKRFFFDKASSQQLGMFVPMGLPQPALLKAHHD 540

Query: 2397 VPQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQ 2218
             P WTALQILQ ALP+ FD S  RY+I QSEI+KFD+N+D +Q+ FN+IIN+V  +KGS+
Sbjct: 541  DPVWTALQILQTALPSCFDSSERRYLISQSEILKFDFNKDALQTSFNEIINSVLFQKGSK 600

Query: 2217 DALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEV 2038
            +AL V NSLQPLLME+IFS G+SVSL+DF IP+++T EL K V+ I PLL+HLRS YNE+
Sbjct: 601  EALNVVNSLQPLLMEHIFSVGFSVSLKDFSIPRAVTEELHKMVEVILPLLHHLRSEYNEM 660

Query: 2037 VELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYT 1858
            VELQVENHLR VKVPVV FILKSS LGNLIDSKS+SSINKVV           DRG++Y+
Sbjct: 661  VELQVENHLRIVKVPVVKFILKSSILGNLIDSKSDSSINKVVQQVGFLGLQFSDRGKLYS 720

Query: 1857 RTLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRG 1678
            RTLVE +T+FF+ K+ V+      E+FGLI SCFF+GLNPYE+LV SISSREVLVRSSRG
Sbjct: 721  RTLVEALTSFFRSKYCVNRDGESPESFGLISSCFFNGLNPYEELVHSISSREVLVRSSRG 780

Query: 1677 LTEPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVL 1498
            LTEPGTLFKNLMAILRDVVICYDGTVRN C+NS+IQF+Y  + G    SF PAGEPVG+L
Sbjct: 781  LTEPGTLFKNLMAILRDVVICYDGTVRNVCNNSLIQFEYGADLGNTPPSFYPAGEPVGIL 840

Query: 1497 AATAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYC 1318
            AATAISNPAYKAVLD       SWELMKEI+LC+ + KNDL D R ILYLNDC CG  YC
Sbjct: 841  AATAISNPAYKAVLDSSPSNNSSWELMKEILLCRASFKNDLIDRRVILYLNDCGCGGYYC 900

Query: 1317 KENAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGR 1138
            KE AAY VQNHLKR +L  IA  F ++Y+KQ     N  TNA LVGHIHLD+  +K + R
Sbjct: 901  KEKAAYIVQNHLKRVSLMDIAVDFSIKYQKQCIFPGNSVTNAGLVGHIHLDKMSLKALNR 960

Query: 1137 NVHQILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPPDAESSQVPCLQFSWQDT 958
            ++  IL+ CQE + S +KKKD+LG ILR + L VSECC    PD E S+ PCLQF W+DT
Sbjct: 961  SMADILKDCQETLNSFRKKKDQLGHILRRVLLLVSECCSVRLPDKERSEFPCLQFLWEDT 1020

Query: 957  SSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXXXX 778
            SS ++++ S+IMAN +C ILL T +KGDP+V  ANI+W +PD  SWVR P KIQ G    
Sbjct: 1021 SSDSIQRISKIMANKVCPILLGTNIKGDPQVLSANIMWTSPDVCSWVRNPCKIQNGELVL 1080

Query: 777  XXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVERL 598
                     K+ GD WR V++SCLPVIHL+DTRRSIPYGIKQ+QE++GISCAFDQAV+RL
Sbjct: 1081 EVVVDKAAVKRTGDAWRVVLNSCLPVIHLVDTRRSIPYGIKQIQELLGISCAFDQAVQRL 1140

Query: 597  TTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTPRK 418
            ++S+RMV KGVLKEHLIL ANSMTCTGN+IGFN+GGYKAL RSLNV +PFTEATLFTPRK
Sbjct: 1141 SSSVRMVTKGVLKEHLILAANSMTCTGNMIGFNSGGYKALLRSLNVHVPFTEATLFTPRK 1200

Query: 417  CFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQNA-VDIYNFLQI 241
            CFEKAA+KCH+DSLSS VASCS+GK V VGTGA+FEILWN KEMG++Q+  +D+Y+FLQ+
Sbjct: 1201 CFEKAAQKCHMDSLSSIVASCSWGKHVTVGTGAQFEILWNNKEMGVNQDGEIDVYDFLQL 1260

Query: 240  VRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPE-HPDGGKATFDD---IAEFEPNSK 73
            VR G+NEG+  + CLG+E+DD+ELE E+ +L+LSP  +    K  FDD   + E     +
Sbjct: 1261 VR-GSNEGDSFTTCLGQEIDDLELENEERELSLSPNVNTCFNKPVFDDNGCLGEDSWGKQ 1319

Query: 72   PSQISEGNWGNNSSQ 28
              +     W  N  Q
Sbjct: 1320 AEKEGINGWDKNEKQ 1334


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
            gi|731435545|ref|XP_010645605.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Vitis vinifera]
          Length = 1830

 Score = 1709 bits (4425), Expect = 0.0
 Identities = 849/1334 (63%), Positives = 1047/1334 (78%), Gaps = 7/1334 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEE+ S++L  +G ++ I+F LA+ QEIC +S+SDCPISH SQLTNPFLGLPLE GKCES
Sbjct: 1    MEEDSSTIL--DGEISGIRFGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCES 58

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQIRKNGEKDKSS 3649
            CGTAEPG+C+GHFGYI+LPIP+YHP H+ ELKR+LS++CLKCL+++K ++  NG  ++  
Sbjct: 59   CGTAEPGQCEGHFGYIELPIPIYHPGHVSELKRMLSLLCLKCLKIRKSKVTNNGITEQLL 118

Query: 3648 ACTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLP 3472
            A   C D P ++VRE    +G+  LELK+P +S+ ++  W+FL RYG+ YG+   R LLP
Sbjct: 119  APC-CQDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNLSRILLP 177

Query: 3471 CEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVS 3292
             EV+EIL+RI  +T+KKL  KGYFPQDGYILQ LPVPPNCLSVPDISDG +IMSSD+SVS
Sbjct: 178  SEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVS 237

Query: 3291 MLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNN 3112
            MLKKVLKQ E+IK SRSG PNFESH++EAN LQS+I QYL VRG+ K  R + ++FG + 
Sbjct: 238  MLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDTRFGSSK 297

Query: 3111 ESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTV 2932
            E +++S KAW+EKM+TLFI KGSGFSSRSVITGDAYKRV+EIGLP EIAQ+ITFEE+V V
Sbjct: 298  EPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNV 357

Query: 2931 HNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPS 2752
            HNM HLQ LVD+KLCLTYRDG S YSL+EGSKGHT L+ GQVVHRRIMDGDIVFINRPP+
Sbjct: 358  HNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPT 417

Query: 2751 THKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQ 2572
            THKHSLQA SVY+HD+HTVKINPLIC PL ADFDGDC+HLFYPQSL AKAEVLELFSVE+
Sbjct: 418  THKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLELFSVEK 477

Query: 2571 QLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVP 2392
            QLLSSHSG LNLQLA D+LLSLK++F++YFL KA AQQL M+VS  L  PALLK+    P
Sbjct: 478  QLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSLPRPALLKSPCSGP 537

Query: 2391 QWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDA 2212
             WTALQILQ ALP+ FDC GER+ I +S I+K DYNRDV+QS+ N+I+ ++F +KG  + 
Sbjct: 538  CWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEV 597

Query: 2211 LKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVE 2032
            LK F+SLQPLLMEN+FSEG+SVSLEDF IP  +T+ +QKNV+ IS LLY+LRS YNE+++
Sbjct: 598  LKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQ 657

Query: 2031 LQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRT 1852
            LQ ENHLR  KVPV NFIL SS LGNLIDSKS+S+INKVV           ++G+ Y+RT
Sbjct: 658  LQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRT 717

Query: 1851 LVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLT 1672
            LVE M   F+ K+   G D PS  FGLIRSCFFHGL+PYE++V SIS+RE++VRSSRGL+
Sbjct: 718  LVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLS 777

Query: 1671 EPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVLAA 1492
            EPGTLFKNLMAILRDVVICYDGTVRN CSNS+IQF+Y V+A T+ + F PAGEPVGVLAA
Sbjct: 778  EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAA 837

Query: 1491 TAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYCKE 1312
            TA+SNPAYKAVLD       SWELMKEI+LC+VN KNDL D R ILYLNDC CG+KYC+E
Sbjct: 838  TAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRE 897

Query: 1311 NAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGRNV 1132
            NAAY V+N LK+ +LK  A  F++EY KQ     + +    LVGHIHL++  ++ +  ++
Sbjct: 898  NAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSM 957

Query: 1131 HQILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPP-DAESSQVPCLQFSWQDTS 955
             ++ Q+C+E I S +KKK+ +G   + + LS  ECC F     ++ S +PCL F WQ   
Sbjct: 958  QEVCQKCEETINSFRKKKN-VGPFFKKIILSFRECCTFQHSCQSKGSDMPCLLFFWQGNR 1016

Query: 954  SCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXXXXX 775
               LEQ   I+A+ IC +LL+TI+KGD RV   NI+W++PDTT+W+R P K +KG     
Sbjct: 1017 DDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSRKGELALD 1076

Query: 774  XXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVERLT 595
                    KQ GD WR V+D+CLPV+HLIDTRRSIPY IKQ+QE++GISCAFDQAV+RL+
Sbjct: 1077 IVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQRLS 1136

Query: 594  TSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTPRKC 415
             S+ MVAKGVLKEHLIL+ANSMTC GNLIGFN+GGYKAL R+LN+Q+PFTEATLFTPRKC
Sbjct: 1137 KSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTPRKC 1196

Query: 414  FEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQN-AVDIYNFLQIV 238
            FEKA+EKCH DSLSS VASCS+GK V VGTG+RF++LW+ KE+G  Q+  +DIY+FL +V
Sbjct: 1197 FEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFLHLV 1256

Query: 237  RTGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHPDG-GKATFDDIAEFE---PNSKP 70
            R+G+   E  + CLG EV+D+ LE E+ +L +SPEH     K  F+D AEF+    N  P
Sbjct: 1257 RSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDSAEFQNTWENHVP 1316

Query: 69   SQISEGNWGNNSSQ 28
               S G+W  N ++
Sbjct: 1317 G--SGGDWAVNQNK 1328


>ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha curcas]
          Length = 1980

 Score = 1663 bits (4306), Expect = 0.0
 Identities = 829/1346 (61%), Positives = 1049/1346 (77%), Gaps = 9/1346 (0%)
 Frame = -3

Query: 4014 KGMEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKC 3835
            K MEEN     I +G +  I+F LA+ +EI T+S+S C I+H SQLTNP+LGLPLE GKC
Sbjct: 7    KAMEEN-VQFTILDGEVVGIRFGLATPKEISTASVSGCSINHSSQLTNPYLGLPLEFGKC 65

Query: 3834 ESCGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMK--KGQIRKNGEK 3661
            +SCGT+E G+C+GHFGYI+LPIP+YHPSH+ ELKRLLS++CLKCL++K  K Q + NG  
Sbjct: 66   QSCGTSEAGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKTNKFQAKSNGVA 125

Query: 3660 DKSSACTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEEC- 3487
            ++  +C  C +   I+V+E    DG+  L+LK+P + +L +  W+FL+RYGF YG ++  
Sbjct: 126  ERLFSC--CEEASQISVKEIKTTDGALFLQLKLPSRMRLNDGFWSFLDRYGFHYGGDDTI 183

Query: 3486 RTLLPCEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSS 3307
            R+LLPCEV+E+LKRI  +T+KKLA KGYFPQ+GYI++ LPVPPNCLSVPDISDG +IMSS
Sbjct: 184  RSLLPCEVMEMLKRIPQDTRKKLARKGYFPQEGYIMRYLPVPPNCLSVPDISDGVSIMSS 243

Query: 3306 DVSVSMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSK 3127
            D+S+SMLKKVLKQ EIIKSSRSG PNFESHEVEA +LQSA+ QYL VRG+ KG R ++S+
Sbjct: 244  DLSISMLKKVLKQVEIIKSSRSGSPNFESHEVEAIDLQSAVDQYLQVRGTAKGSRDVESR 303

Query: 3126 FGVNNESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFE 2947
            FG++ ES+D+S KAW+EKM+TLFI KGSGFSSRSVITGDAYKRV+EIG+P EIAQ+ITFE
Sbjct: 304  FGIHKESNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGIPFEIAQRITFE 363

Query: 2946 EKVTVHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFI 2767
            E+V+VHN+ +LQELVD KLC+TYRDG S YSL++GSKGHT L+ GQVVHRRIMDGD VFI
Sbjct: 364  ERVSVHNVKYLQELVDNKLCMTYRDGSSTYSLRDGSKGHTFLRPGQVVHRRIMDGDTVFI 423

Query: 2766 NRPPSTHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLEL 2587
            NRPP+THKHSLQA SVY+HD+HTVKINPLIC PL ADFDGDC+HLFYPQSLAAKAEVLEL
Sbjct: 424  NRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLEL 483

Query: 2586 FSVEQQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKA 2407
            FSVE+QLLSSHSG LNLQL  D+LLSLK MFK YFL +A AQQLAM+VS  L  P L K 
Sbjct: 484  FSVEKQLLSSHSGNLNLQLTTDSLLSLKSMFKAYFLDRAAAQQLAMFVSFSLPQPTLWKV 543

Query: 2406 CGPVPQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKK 2227
                P WT LQILQ ALP+ FDC+GERY I + +I+K D++RDVVQS+ N+I+ ++F +K
Sbjct: 544  PYSDPIWTVLQILQTALPSQFDCTGERYFISKGDIIKIDFSRDVVQSVINEIVISIFFEK 603

Query: 2226 GSQDALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTY 2047
            G     K FNSLQPLLMEN+FSEG+SV LED  I +++   + K+ + ISPLL  LRSTY
Sbjct: 604  GPDAVFKFFNSLQPLLMENLFSEGFSVCLEDLYISRAVIESIHKDFKVISPLLSQLRSTY 663

Query: 2046 NEVVELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGR 1867
            NE+VELQ+ENH+R VK+ V  FI++SS++G+LID KS+S++ KVV           DRG+
Sbjct: 664  NELVELQLENHIRQVKLRVAEFIVRSSSIGDLIDYKSDSAMTKVVQQIGFLGLQISDRGK 723

Query: 1866 IYTRTLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRS 1687
             Y++TLVEDM + F++K+    ++ PS  +GLI+SCFFHGL+PYE++V SIS+REV+VRS
Sbjct: 724  FYSKTLVEDMVSHFERKYPSEVVEYPSAQYGLIQSCFFHGLDPYEEMVHSISTREVIVRS 783

Query: 1686 SRGLTEPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPV 1507
            SRGL+EPGTLFKNLMAILRDVVICYDGTVRN CSNS+IQF+Y V+AG + +S  PAGEPV
Sbjct: 784  SRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKAGIKAQSLFPAGEPV 843

Query: 1506 GVLAATAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGK 1327
            GVLAATA+SNPAYKAVLD       SWELMKEI+LC+VN KNDL D R ILYLNDC CG+
Sbjct: 844  GVLAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCRVNFKNDLTDRRIILYLNDCGCGR 903

Query: 1326 KYCKENAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKY 1147
             YC+E AAY V+NHL++  LK IAN F++EY++Q     +   +  L GHIHLD+ +++ 
Sbjct: 904  NYCQEKAAYKVKNHLQKVILKDIANHFMIEYKRQ-----HTIADVGLAGHIHLDKMKLEN 958

Query: 1146 VGRNVHQILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPPDA-ESSQVPCLQFS 970
            +  ++  I Q+C E +   +KKK +L    + + +S S+CC F    A E S  PCL F 
Sbjct: 959  LKVSMEVIHQKCTETVNFFRKKK-KLALFFKRIEVSASQCCSFQESCADEWSGSPCLTFF 1017

Query: 969  WQDTSSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKG 790
            WQD S   +E+ S + A+ IC +LLET++KGD R++ ANI W++PDTT+W+R PS+ QKG
Sbjct: 1018 WQD-SDIRIERISNLFADMICPVLLETVIKGDHRISNANITWISPDTTTWIRNPSRTQKG 1076

Query: 789  XXXXXXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQA 610
                         KQ GD WR V+DSCLPV+HLIDT RSIPY IKQ+QE++G+SCAFDQA
Sbjct: 1077 ELALDVVIEKSAVKQSGDAWRIVLDSCLPVLHLIDTTRSIPYAIKQIQELLGVSCAFDQA 1136

Query: 609  VERLTTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLF 430
            V+RL+TS+ +VAKGVLKEHLIL+ANSMTC GNL+GFN+GGYK+L RSL+VQ+PFT+ATLF
Sbjct: 1137 VQRLSTSVTIVAKGVLKEHLILLANSMTCAGNLVGFNSGGYKSLSRSLDVQVPFTDATLF 1196

Query: 429  TPRKCFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYN 253
            TPRKCFE+AAEKCH+D+LSS VASCS+GK VAVGTG+RF++LW+KKE  LDQ  ++D+Y 
Sbjct: 1197 TPRKCFERAAEKCHVDTLSSIVASCSWGKNVAVGTGSRFDVLWDKKEACLDQEGSIDVYE 1256

Query: 252  FLQIVRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHPDGG-KATFDDIAEFEP-- 82
            FL +VR   N GE  + CLG +VDD+ L+    D  LSPEH  G  K TF+D AEF+   
Sbjct: 1257 FLNMVRCSAN-GEESTACLGADVDDLMLDDGMDDWNLSPEHNFGSDKPTFEDRAEFQNCL 1315

Query: 81   NSKPSQISEGNWGNNSSQTCESGGWG 4
            +++P+   + ++  N S +   G WG
Sbjct: 1316 DNQPADWEKASYAVNGSSS--GGNWG 1339


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score = 1654 bits (4284), Expect = 0.0
 Identities = 837/1342 (62%), Positives = 1023/1342 (76%), Gaps = 11/1342 (0%)
 Frame = -3

Query: 4002 ENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCESCG 3823
            E  SS  I EG +T IKF LA+HQEICT+SIS+C ISH SQL+NPFLGLPLE GKCESCG
Sbjct: 2    EEASSSTILEGEITGIKFGLATHQEICTASISNCAISHASQLSNPFLGLPLEFGKCESCG 61

Query: 3822 TAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQI-RKNGEKDKSSA 3646
            T+E G+C+GHFGYI+LPIP++HP+H+ ELKR+LS++CLKCL+MKK +   KN    +   
Sbjct: 62   TSEAGKCEGHFGYIELPIPIFHPNHVSELKRMLSLLCLKCLKMKKNKFPTKNAGLAERML 121

Query: 3645 CTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPC 3469
             + C D   +++ E    DGS  L+LK P KS+     WNFLERYGF YG    RTLLPC
Sbjct: 122  SSCCEDASQVSIGEIKPTDGSCSLQLKRPSKSRTPPGFWNFLERYGFRYGDGHIRTLLPC 181

Query: 3468 EVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSM 3289
            EV+E+LKRI  ET+KKLAAKGYFPQDGYIL ++PVPPNCLSVP+ISDG ++MS+D S+SM
Sbjct: 182  EVMEMLKRIPQETRKKLAAKGYFPQDGYILSQIPVPPNCLSVPEISDGVSVMSADPSISM 241

Query: 3288 LKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNE 3109
            LKKVLKQ EII+SSRSG PNFES  VEANELQ+ I QYL VRG+ K  R I ++FGVN E
Sbjct: 242  LKKVLKQVEIIRSSRSGIPNFESQIVEANELQAIIDQYLQVRGTGKPSRDIDARFGVNKE 301

Query: 3108 SDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVH 2929
             + +S KAW+EKM+TLFI KGSGFSSRSVITGDA++RV+E+G+P EIAQ+ITFEEKV  H
Sbjct: 302  LNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRITFEEKVNDH 361

Query: 2928 NMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPST 2749
            N+ +LQELVD KLCLTY+DG S YSL+EGSKGHT L+ GQVVHRRIMDGD+VF+NRPP+T
Sbjct: 362  NIRYLQELVDSKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDLVFVNRPPTT 421

Query: 2748 HKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQ 2569
            HKHSLQA  VY+HD+H VKINPLIC PL ADFDGDCIHLFYPQSLAAKAEVLELFSVE+Q
Sbjct: 422  HKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQ 481

Query: 2568 LLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQ 2389
            LLSSHSGK NLQLA DALLSLK+MFKKYFL KA AQQLAM+ SS L  PALLKA      
Sbjct: 482  LLSSHSGKPNLQLAADALLSLKMMFKKYFLDKAAAQQLAMFASSSLPRPALLKANSAHSY 541

Query: 2388 WTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDAL 2209
            WTA QILQ ALPA FDCSG+ Y++ +SEI+  D++   V ++ NDI  +VF +KG +D L
Sbjct: 542  WTAFQILQTALPAHFDCSGDNYLVNKSEILNIDFSTSSVAAVMNDIATSVFFEKGGEDVL 601

Query: 2208 KVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVEL 2029
            K F+SLQPLLMEN+FSEG+SV LEDF + ++  +++QKN+Q  S LLYHLRSTYNE VE 
Sbjct: 602  KFFDSLQPLLMENLFSEGFSVGLEDFYMSRTSIQDIQKNIQDSSDLLYHLRSTYNEFVEF 661

Query: 2028 QVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTL 1849
            Q++N +R VKVPV +FIL+SS LG+LIDSKS+S+INK+V           D+GR Y++TL
Sbjct: 662  QLQNRIRSVKVPVSHFILESSALGDLIDSKSDSAINKIVQQIGFLGLQLSDKGRFYSKTL 721

Query: 1848 VEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTE 1669
            VED+ +    K+  S ID PS  +GL++SCFFHGL+PYE +V SI++REV+VRSSRGL+E
Sbjct: 722  VEDVASLCHSKYP-SDIDYPSAEYGLVQSCFFHGLDPYEAIVHSIATREVIVRSSRGLSE 780

Query: 1668 PGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVLAAT 1489
            PGTLFKNLMAILRDVVICYDGTVRN CSNS+IQF+Y V  G+  +   PAGEPVGVLAAT
Sbjct: 781  PGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNIGSRPQHLFPAGEPVGVLAAT 840

Query: 1488 AISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYCKEN 1309
            A+SNPAYKAVLD       SWELMKEI+LCKVN KN+L D R ILYLN+C CG+KYC+E 
Sbjct: 841  AMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGCGRKYCRER 900

Query: 1308 AAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGRNVH 1129
            AA  V+N LK+ +LK  A  F++EY  Q   + +   +A LVGHIHL+E  ++ +   VH
Sbjct: 901  AACLVKNQLKKVSLKDTAVEFMIEYNNQLSGLGSLINDAGLVGHIHLNEDMLRELNIGVH 960

Query: 1128 QILQRCQEKIGSIK-----KKKDRLGRILRSLTLSVSECCYFSPPDAES-SQVPCLQFSW 967
             ILQ+CQE I S +     KKK  +G   ++  L  SE C F    AE  S  PCL F  
Sbjct: 961  DILQKCQETINSFRRKKVGKKKFNIGYHFKNTVLFASEHCSFHHSCAEKRSDSPCLMFFL 1020

Query: 966  QDTSSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGX 787
            Q T       T Q  A+ IC +LLETI+KGDPR+  ANI+W++PDTT+W+R P+K QKG 
Sbjct: 1021 QATDDLETTTTLQYYADLICPVLLETIIKGDPRIGSANIIWIDPDTTTWIRSPNKSQKGE 1080

Query: 786  XXXXXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAV 607
                        KQ GD WRTV+DSCLPV+HLIDTRRSIPY IKQ+QE++G+SCAFDQAV
Sbjct: 1081 WALDIVLEKSVIKQSGDAWRTVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFDQAV 1140

Query: 606  ERLTTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFT 427
            +RL+T++ MVAKGVLKEHLIL+ANSMTC GN +GFN+ GYKAL R+LN+Q+PFTEATLFT
Sbjct: 1141 QRLSTAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEATLFT 1200

Query: 426  PRKCFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYNF 250
            PRKCFE+AAEKCH+DSL+S VASCS+GK VAVGTG RF++LW+ +E+ L Q   +D++NF
Sbjct: 1201 PRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGVRFDVLWDTREVELTQEGGLDVFNF 1260

Query: 249  LQIVRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPE-HPDGGKATFDDIAEFEPNSK 73
            L +V T  N  E  +G LG EVDD+ L  E AD + SPE +    +  F+D+ EF+   K
Sbjct: 1261 LHMVST-ANVEEATTGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDLVEFD--DK 1317

Query: 72   PSQISE-GNWGNNSSQTCESGG 10
               + E  NW  +SS   +S G
Sbjct: 1318 LGDLPEKSNWEKDSSFHTDSNG 1339


>ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus]
            gi|778702723|ref|XP_011655251.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis sativus]
            gi|700195913|gb|KGN51090.1| hypothetical protein
            Csa_5G435050 [Cucumis sativus]
          Length = 1963

 Score = 1654 bits (4283), Expect = 0.0
 Identities = 828/1342 (61%), Positives = 1034/1342 (77%), Gaps = 6/1342 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEE  S   I +  +  I+FSLA+ QEIC ++ISDCPI+H SQL+NPFLGLP+E GKCES
Sbjct: 1    MEEAPSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCES 60

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQI-RKNGEKDKS 3652
            CGT+EPG+C+GHFGYI+LPIP+YHP+H+ ELK++LS++CLKCL+MKK +   KN    + 
Sbjct: 61   CGTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLKCLKMKKTKFPSKNIGFAER 120

Query: 3651 SACTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLL 3475
               + C D   +T+RE+   DG+  L+LKVP ++ L+E  W+FLERYGF YG    RTLL
Sbjct: 121  LLSSCCEDASQVTIREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNFTRTLL 180

Query: 3474 PCEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSV 3295
            PCEV E+LK+I  ET+KKLA +GY+PQDGYILQ LPVPPNCLSVP+ISDG T+MSSD +V
Sbjct: 181  PCEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAV 240

Query: 3294 SMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVN 3115
            SMLKK+LKQ EIIK SRSG PNFESHEVEAN+LQ A+ QYL VRG+ K  RGI ++FGVN
Sbjct: 241  SMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVN 300

Query: 3114 NESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVT 2935
             E +D S KAW+EKM+TLFI KGSGFSSRSVITGDAYK V+EIG+P E+AQ+ITFEE+V+
Sbjct: 301  KELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVS 360

Query: 2934 VHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPP 2755
            VHN+ +LQELVDKKLCLTYRDG S YSL+EGS GHT LK GQ+VHRRIMDGDIVFINRPP
Sbjct: 361  VHNIRYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPP 420

Query: 2754 STHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVE 2575
            +THKHSLQA  VY+HD+H VKINPLIC PL ADFDGDCIHLFYPQS+AAKAEVL LFSVE
Sbjct: 421  TTHKHSLQALRVYLHDDHVVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVE 480

Query: 2574 QQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPV 2395
            +QLLSSHSG LNLQLAND+LLSLK+MF+KYFL KA AQQLAM+VSS L  PALL      
Sbjct: 481  KQLLSSHSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGS 540

Query: 2394 PQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQD 2215
              WTALQILQ  LPA FDC G+ Y+I+ S  +KFD++RD + S+ N+I+ ++F +KG ++
Sbjct: 541  LHWTALQILQTVLPASFDCHGDSYLIKNSNFLKFDFDRDAMPSLINEILTSIFFQKGPEE 600

Query: 2214 ALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVV 2035
             LK F+SLQPLLME+IFSEG+SV L+D+ +P +  + LQKN+Q +SPLLY LRST+NE+V
Sbjct: 601  VLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELV 660

Query: 2034 ELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTR 1855
            ELQ+ENHLR VKVP  NFILK S+LG L DSKSES+INKVV           D+GR Y++
Sbjct: 661  ELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSK 720

Query: 1854 TLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGL 1675
            +L+ED+ + F  +++   ID PS  FGL++ CFFHGL+PYE++V SIS+REV+VRSSRGL
Sbjct: 721  SLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGL 780

Query: 1674 TEPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAG-TEDRSFSPAGEPVGVL 1498
            TEPGTLFKNLMAILRDVVICYDGTVRN CSNS+IQ +Y ++AG  +  S  P GEPVGVL
Sbjct: 781  TEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVL 840

Query: 1497 AATAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYC 1318
            AATA+S PAYKAVLD       SW++MKEI+LCKV+ KN+  D R ILYLN+C+CG+KYC
Sbjct: 841  AATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGRKYC 900

Query: 1317 KENAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGR 1138
             ENAAY V++HLK+  LK  A  F++EY +Q            LVGH+HL+   +K +  
Sbjct: 901  NENAAYVVKSHLKKVTLKDAAMDFMIEYNRQP---TPSGLGPGLVGHVHLNRMLLKELNI 957

Query: 1137 NVHQILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPPDAESS-QVPCLQFSWQD 961
            ++ ++L+RCQE + S KKKK ++   LR    S+SE C F   + E S  +PCL F W  
Sbjct: 958  DMTEVLRRCQETMSSFKKKKKKIAHALR---FSISEHCAFHQWNGEESIDMPCLIF-WHQ 1013

Query: 960  TSSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXXX 781
            T    LE+T+ I+A+ +  +L ETI+KGDPR+  A+++W++PD+TSW + PS+ Q G   
Sbjct: 1014 TRDVHLERTAHILADIVFPLLSETIIKGDPRIKSASVIWISPDSTSWQKNPSRWQDGELA 1073

Query: 780  XXXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVER 601
                      KQ+GD WR V+D CLPV+HLIDTRRS+PY IKQ+QE++GISCAFDQ ++R
Sbjct: 1074 LDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMIQR 1133

Query: 600  LTTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTPR 421
            L+ S+ MV+KGVL +HLIL+ANSMTCTGN+IGFN+GGYKAL R+LN+Q+PFTEATLFTPR
Sbjct: 1134 LSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFTPR 1193

Query: 420  KCFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYNFLQ 244
            KCFEKAAEKCH DSLSS VASCS+GK VAVGTG+RF+ILW++KE+G  Q + VD+YNFL 
Sbjct: 1194 KCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQDDVVDVYNFLH 1253

Query: 243  IVRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPE-HPDGGKATFDDIAEFEPNSKPS 67
            +VR+G +E E  S CLGEE++D+ +E E  +L LSPE      K  F+D AEFE +   +
Sbjct: 1254 MVRSGKSE-EPTSACLGEEIEDIMVEDEYGELTLSPEPFSTSEKPVFEDSAEFE-HCLDN 1311

Query: 66   QISEGNWGNNSSQTCESGGWGE 1
               E  W    S    S G G+
Sbjct: 1312 YPGESKWEKAPSLGAVSTGGGQ 1333


>ref|XP_008231662.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Prunus mume]
          Length = 1855

 Score = 1652 bits (4279), Expect = 0.0
 Identities = 835/1342 (62%), Positives = 1022/1342 (76%), Gaps = 11/1342 (0%)
 Frame = -3

Query: 4002 ENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCESCG 3823
            E  SS  I EG +T IKF LA+HQEICT+SIS+C ISH SQL+NPFLGLPLE GKCESCG
Sbjct: 2    EEASSSTILEGEITGIKFGLATHQEICTASISNCAISHASQLSNPFLGLPLEFGKCESCG 61

Query: 3822 TAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQI-RKNGEKDKSSA 3646
            T+E G+C+GHFGYI+LPIP++HP+H+ ELKR+LS++CLKCL+MKK +   KN    +   
Sbjct: 62   TSEAGKCEGHFGYIELPIPIFHPNHVSELKRMLSLLCLKCLKMKKNKFPTKNAGLAERML 121

Query: 3645 CTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPC 3469
             + C D   +++ E    DGS  L+LK P KS+     WNFLERYGF YG    RTLLPC
Sbjct: 122  SSCCEDASQVSIGEIKPTDGSCSLQLKRPSKSRTPPGFWNFLERYGFRYGDGHIRTLLPC 181

Query: 3468 EVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSM 3289
            EV+E+LKRI  ET+KKLAAKGYFPQDGYIL ++PVPPNCLSVP+ISDG ++MS+D S+SM
Sbjct: 182  EVMEMLKRIPQETRKKLAAKGYFPQDGYILSQIPVPPNCLSVPEISDGVSVMSADPSISM 241

Query: 3288 LKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNE 3109
            LKKVLKQ EII+SSRSG PNFES  VEANELQ+ I QYL VRG+ K  R I ++FGVN E
Sbjct: 242  LKKVLKQVEIIRSSRSGIPNFESQIVEANELQAIIDQYLQVRGTGKPSRDIDARFGVNKE 301

Query: 3108 SDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVH 2929
             + +S KAW+EKM+TLFI KGSGFSSRSVITGDA++RV+E+G+P EIAQ+ITFEEKV  H
Sbjct: 302  LNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRITFEEKVNDH 361

Query: 2928 NMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPST 2749
            N+ +LQELVD KLCLTY+DG S YSL+EGSKGHT L+ GQVVHRRIMDGD+VF+NRPP+T
Sbjct: 362  NIRYLQELVDSKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDLVFVNRPPTT 421

Query: 2748 HKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQ 2569
            HKHSLQA  VY+HD+H VKINPLIC PL ADFDGDCIHLFYPQSLAAKAEVLELFSVE+Q
Sbjct: 422  HKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQ 481

Query: 2568 LLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQ 2389
            LLSSHSGK NLQLA DALLSLK+MFKKYFL KA AQQLAM+ SS L  PALLKA      
Sbjct: 482  LLSSHSGKPNLQLATDALLSLKMMFKKYFLDKAAAQQLAMFASSSLPRPALLKANSAHSY 541

Query: 2388 WTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDAL 2209
            WTA QILQ ALPA FDC+G+ Y++ +SEI+  D++   V ++ NDI  +VF +KG +  L
Sbjct: 542  WTAFQILQTALPAHFDCNGDNYLVNKSEILNIDFSTSSVAAVMNDIATSVFFEKGGEAVL 601

Query: 2208 KVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVEL 2029
            K F+SLQPLLMEN+FSEG+SV LEDF + ++  +++QKN+Q  S LLYHLRSTYNE VE 
Sbjct: 602  KFFDSLQPLLMENLFSEGFSVGLEDFSMSRASIQDIQKNIQDSSDLLYHLRSTYNEFVEF 661

Query: 2028 QVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTL 1849
            Q++N +R VKVPV +FIL+SS LG+LIDSKS+S+INK+V           D+GR Y++TL
Sbjct: 662  QLQNRIRSVKVPVSHFILESSALGDLIDSKSDSAINKIVQQIGFLGLQLSDKGRFYSKTL 721

Query: 1848 VEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTE 1669
            VED+ +    K+  S ID PS  +GL++SCFFHGL+PYE +V SI++REV+VRSSRGL+E
Sbjct: 722  VEDVASLCHSKYP-SDIDYPSAEYGLVQSCFFHGLDPYEAIVHSIATREVIVRSSRGLSE 780

Query: 1668 PGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVLAAT 1489
            PGTLFKNLMAILRDVVICYDGTVRN CSNS+IQF+Y V  G+  +   PAGEPVGVLAAT
Sbjct: 781  PGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNTGSRHQHLFPAGEPVGVLAAT 840

Query: 1488 AISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYCKEN 1309
            A+SNPAYKAVLD       SWELMKEI+LCKVN KN+L D R ILYLN+C CG+KYC+E 
Sbjct: 841  AMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGCGRKYCRER 900

Query: 1308 AAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGRNVH 1129
            AA  V+N LK+ +LK  A  F++EY  Q   + +   +A LVGHIHL+E  ++ +   VH
Sbjct: 901  AACLVKNQLKKVSLKDTAVEFMIEYNNQLSGLGSLVNDAGLVGHIHLNEDMLRELNVGVH 960

Query: 1128 QILQRCQEKIGSIK-----KKKDRLGRILRSLTLSVSECCYFSPPDAES-SQVPCLQFSW 967
             ILQ+CQE I S +     KKK  +G   ++  L  SE C F    AE  S  PCL F  
Sbjct: 961  DILQKCQETINSFRRKKVGKKKFNIGYHFKNTVLFASEHCSFHHSSAEKRSDSPCLMFFL 1020

Query: 966  QDTSSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGX 787
            Q T       T Q  A+ IC +LLETI+KGDPR+  ANI+W++PDTT+W+R P+K QKG 
Sbjct: 1021 QATDDLETTTTLQYYADLICPVLLETIIKGDPRIGSANIIWIDPDTTTWIRSPNKSQKGE 1080

Query: 786  XXXXXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAV 607
                        KQ GD WRTV+DSCLPV+HLIDTRRSIPY IKQ+QE++G+SCAFDQAV
Sbjct: 1081 WALDVVLEKSVIKQSGDAWRTVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFDQAV 1140

Query: 606  ERLTTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFT 427
            +RL+T++ MVAKGVLKEHLIL+ANSMTC GN +GFN+ GYKAL R+LN+Q+PFTEATLFT
Sbjct: 1141 QRLSTAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEATLFT 1200

Query: 426  PRKCFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYNF 250
            PRKCFE+AAEKCH+DSL+S VASCS+GK VAVGTGARF++LW+ +E+   Q   +D++NF
Sbjct: 1201 PRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGARFDVLWDTREVEFTQEGGLDVFNF 1260

Query: 249  LQIVRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPE-HPDGGKATFDDIAEFEPNSK 73
            L +V T   E E  +G LG EVDD+ L  E AD + SPE +    +  F+D+ EF+   K
Sbjct: 1261 LHMVSTANVEEET-TGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDLVEFD--DK 1317

Query: 72   PSQISE-GNWGNNSSQTCESGG 10
               + E  NW  +SS   +S G
Sbjct: 1318 LGDLPEKSNWEKDSSFHTDSSG 1339


>ref|XP_009361958.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Pyrus x
            bretschneideri] gi|694366759|ref|XP_009361959.1|
            PREDICTED: DNA-directed RNA polymerase V subunit 1 [Pyrus
            x bretschneideri]
          Length = 1960

 Score = 1652 bits (4277), Expect = 0.0
 Identities = 830/1350 (61%), Positives = 1034/1350 (76%), Gaps = 16/1350 (1%)
 Frame = -3

Query: 4002 ENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCESCG 3823
            E  S+  I +G +  IKF LA+HQEICT+SISDC ISH SQL+NPFLGLPLE GKCESCG
Sbjct: 2    EEASTSNILDGEIVGIKFGLATHQEICTASISDCSISHASQLSNPFLGLPLEFGKCESCG 61

Query: 3822 TAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQI-RKNGEKDKSSA 3646
            T+EPG+C+GHFGYI+LP+P++HP+H+ ELKR+LS++CLKCL+MKK +   KN    +   
Sbjct: 62   TSEPGKCEGHFGYIELPVPIFHPNHVSELKRMLSLLCLKCLKMKKNKFPTKNAGLAERML 121

Query: 3645 CTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPC 3469
             + C D   +++ E+   D S  L+LK P KS+     WNFLERYGF YG +  RTLLPC
Sbjct: 122  ASCCEDAAQVSIGETKPTDSSCSLQLKRPSKSRTPPGFWNFLERYGFRYGDDHIRTLLPC 181

Query: 3468 EVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSM 3289
            EVLE+LKRI  +T+KKLA+KGYFPQDGYIL+ +PVPPNCLSVP+ISDG ++MS+D S+SM
Sbjct: 182  EVLEMLKRIPQDTRKKLASKGYFPQDGYILRHIPVPPNCLSVPEISDGVSVMSADPSISM 241

Query: 3288 LKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNE 3109
            L+KVLKQ E+I+SSRSG PNFES  VEANELQ+ + QYL VRG+ K  R I ++ GVN E
Sbjct: 242  LRKVLKQIEVIRSSRSGIPNFESQIVEANELQAIVDQYLQVRGTGKASRDIDARLGVNRE 301

Query: 3108 SDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVH 2929
             + +S KAW+EKM+TLFI KGSGFSSRSVITGDAYKRV+E+G+P EIAQ+ITFEEKV  H
Sbjct: 302  LNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEVGIPYEIAQRITFEEKVNDH 361

Query: 2928 NMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPST 2749
            N+ +LQ+LVDKKLCLTYRDG S YSL+EGSKGHT L+ GQVVHRRI+DGD+VF+NRPP+T
Sbjct: 362  NIRYLQQLVDKKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRILDGDLVFVNRPPTT 421

Query: 2748 HKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQ 2569
            HKHSLQA  VY+HD+H VKINPLIC PL ADFDGDCIHLFYPQSLAAKAEVLELFSVE+Q
Sbjct: 422  HKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQ 481

Query: 2568 LLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQ 2389
            LLSSHSGK NLQ+A D+LLSLK+MFK YFL K+ AQQLAM+ SS L  PALLKA      
Sbjct: 482  LLSSHSGKPNLQMATDSLLSLKMMFKNYFLDKSAAQQLAMFASSSLPRPALLKANAARSY 541

Query: 2388 WTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDAL 2209
            WTALQILQ ALPA FD  GE+Y++ +SEI+K D++   V ++ ND+  +VF +KG +D L
Sbjct: 542  WTALQILQTALPAHFDYCGEKYLVNKSEILKIDFSTSEVSAVMNDVATSVFFEKGGEDVL 601

Query: 2208 KVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVEL 2029
            K F+SLQPLLMENIFSEG+SV LEDF + K+  +++QKN+Q  S LLYHLRSTYNE VE 
Sbjct: 602  KFFDSLQPLLMENIFSEGFSVGLEDFYMSKTSIQDIQKNIQDTSDLLYHLRSTYNEFVEF 661

Query: 2028 QVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTL 1849
            Q+E+ ++ +KVPV  FIL+SS  G+LIDSKS+S+INKVV           D+GR Y++TL
Sbjct: 662  QLESRIKNLKVPVSCFILESSAFGDLIDSKSDSAINKVVQQIGFLGLQLSDKGRFYSKTL 721

Query: 1848 VEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTE 1669
            VED+ + +  K++ + ++ PS  +GL++SCFFHGL+PYE++V SI++REV+VRSSRGLTE
Sbjct: 722  VEDVASLYHNKYSFN-MEYPSAEYGLVQSCFFHGLDPYEEIVHSIATREVIVRSSRGLTE 780

Query: 1668 PGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVLAAT 1489
            PGTLFKNLMAILRDVVICYDGTVRN CSNSVIQF+Y V +G+   +  PAGEPVGVLAAT
Sbjct: 781  PGTLFKNLMAILRDVVICYDGTVRNVCSNSVIQFEYGVNSGSRPPNLFPAGEPVGVLAAT 840

Query: 1488 AISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYCKEN 1309
            A+SNPAYKAVLD       SWELMKEI+LCKVN KN+L D R ILYL++C CG+ +C+E 
Sbjct: 841  AMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLSNCGCGRTFCRER 900

Query: 1308 AAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGRNVH 1129
            AA  V+N LK+ +LK  A  F++EY  Q  S+ +    A LVGHIHL+E  ++ +   V 
Sbjct: 901  AACLVKNQLKKVSLKDTAVEFMIEYSNQLSSLGSMVNEAGLVGHIHLNEELLRELNVGVD 960

Query: 1128 QILQRCQEKIGSIK-----KKKDRLGRILRSLTLSVSECCYFSPPDAES-SQVPCLQFSW 967
            +I Q+CQE + S +     KKK  +G + ++  L  SE C F    A+  S  PCL F  
Sbjct: 961  EIQQKCQETVNSFRRKRVGKKKFNIGYLFKNTVLFASEHCSFHHSCADKRSDSPCLMFFL 1020

Query: 966  QDTSSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGX 787
            Q T    LE TSQ  A+ IC +LLETI+KGDPR++ ANI+W++PDTT+W+R P+K QKG 
Sbjct: 1021 QATEE--LETTSQYYADLICPVLLETIIKGDPRISSANIIWIDPDTTTWIRSPNKSQKGE 1078

Query: 786  XXXXXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAV 607
                        KQ GD WR V+DSCLPV+HLIDTRRSIPY IKQ+QE++G+SCAFDQAV
Sbjct: 1079 WALDVVLEKSVVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFDQAV 1138

Query: 606  ERLTTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFT 427
            +RL T++ MVAKGVLKEHLIL+ANSMTC GN +GFN+ GYKAL R+LN+Q+PFTEATLFT
Sbjct: 1139 QRLATAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEATLFT 1198

Query: 426  PRKCFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYNF 250
            PRKCFE+AAEKCH+DSLSS VASCS+GK VAVGTG+RF+ILW+ +E GL+Q   +D++NF
Sbjct: 1199 PRKCFERAAEKCHMDSLSSIVASCSWGKHVAVGTGSRFDILWDTREGGLNQEGGLDVFNF 1258

Query: 249  LQIVRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHPDG-GKATFDDIAEFEPNSK 73
            L +V T   E E  +G LG EVDD+ +  E AD  LSPE   G  +  F+DI EFE  S+
Sbjct: 1259 LHMVSTANGE-EATTGALGAEVDDLMVVDELADSCLSPELDSGLDRPVFEDIIEFEDKSE 1317

Query: 72   --PSQISEGN----WGNNSSQTCESGGWGE 1
              P + S  N    WG NS++   +  WG+
Sbjct: 1318 TPPGKSSWENDSSVWGTNSTREDATSSWGK 1347


>ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo]
            gi|659072503|ref|XP_008465867.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis melo]
            gi|659072505|ref|XP_008465874.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis melo]
          Length = 1964

 Score = 1650 bits (4272), Expect = 0.0
 Identities = 826/1342 (61%), Positives = 1034/1342 (77%), Gaps = 6/1342 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEE  S   I +  +  I+FSLA+ QEIC ++ISDCPI+H SQL+NPFLGLP+E GKCES
Sbjct: 1    MEEAPSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCES 60

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQI-RKNGEKDKS 3652
            CGT+EPG+C+GHFGYI+LPIP+YHP+H+ EL+++LS++CLKCL+MKK +   KN    + 
Sbjct: 61   CGTSEPGKCEGHFGYIELPIPIYHPNHITELRKMLSLLCLKCLKMKKTKFPSKNIGFAER 120

Query: 3651 SACTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLL 3475
               + C D   +T+RE+   DG+  L+LKVP ++ L+E  W+FLERYGF YG    RTLL
Sbjct: 121  LLSSCCEDASQVTIREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNFTRTLL 180

Query: 3474 PCEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSV 3295
            PCEV E+LK+I  ET+KKLA +GY+PQDGYILQ LPVPPNCLSVP+ISDG T+MSSD +V
Sbjct: 181  PCEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAV 240

Query: 3294 SMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVN 3115
            SMLKK+LKQ EIIK SRSG PNFESHEVEAN+LQ A+ QYL VRG+ K  RGI ++FGVN
Sbjct: 241  SMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVN 300

Query: 3114 NESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVT 2935
             E +D S KAW+EKM+TLFI KGSGFSSRSVITGDAYK V+EIG+P E+AQ+ITFEE+V+
Sbjct: 301  KELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVS 360

Query: 2934 VHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPP 2755
            VHN+ +LQELVDKKLCLTYRDG S YSL+EGS GHT LK GQ+VHRRIMDGDIVFINRPP
Sbjct: 361  VHNIRYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPP 420

Query: 2754 STHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVE 2575
            +THKHSLQA  VY+HD+H VKINPLIC  L ADFDGDCIHLFYPQS+AAKAEVL LFSVE
Sbjct: 421  TTHKHSLQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVE 480

Query: 2574 QQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPV 2395
            +QLLSSHSG LNLQLAND+LLSLK+MF+KYFL KA AQQLAM+VSS L  PALL      
Sbjct: 481  KQLLSSHSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGS 540

Query: 2394 PQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQD 2215
              WTALQILQ  LPA FDC G+ Y+I+ S  +KFD+++D + S+ N+I+ ++F +KG ++
Sbjct: 541  LHWTALQILQTVLPACFDCHGDSYLIKNSNFLKFDFDKDAMPSLINEILTSIFFQKGPEE 600

Query: 2214 ALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVV 2035
             LK F+SLQPLLME+IFSEG+SV L+D+ +P +  + LQKN+Q +SPLLY LRST+NE+V
Sbjct: 601  VLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELV 660

Query: 2034 ELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTR 1855
            ELQ+ENHLR VKVP  NFILK S+LG L DSKSES+INKVV           D+GR Y++
Sbjct: 661  ELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSK 720

Query: 1854 TLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGL 1675
            +L+ED+ + F  +++   ID PS  FGL++ CFFHGL+PYE++V SIS+REV+VRSSRGL
Sbjct: 721  SLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGL 780

Query: 1674 TEPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAG-TEDRSFSPAGEPVGVL 1498
            TEPGTLFKNLMAILRDVVICYDGTVRN CSNS+IQ +Y ++AG  +  S  P GEPVGVL
Sbjct: 781  TEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVL 840

Query: 1497 AATAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYC 1318
            AATA+S PAYKAVLD       SW++MKEI+LCKV+ KN+  D R ILYLN+C+CG+KYC
Sbjct: 841  AATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGRKYC 900

Query: 1317 KENAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGR 1138
             ENAAY V++HLK+  LK +A  F++EY +Q            LVGH+HL+   +K +  
Sbjct: 901  NENAAYVVKSHLKKVTLKDVAVDFMIEYNRQP---TPSGLGPGLVGHVHLNRMLLKELNI 957

Query: 1137 NVHQILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSP-PDAESSQVPCLQFSWQD 961
            N+ ++L+RCQE + S KKKK ++   LR    ++SE C F      ES  +PCL F W +
Sbjct: 958  NMTEVLRRCQETMSSFKKKKKKVAHALR---FAISEHCAFHQWNGVESIDMPCLIF-WHE 1013

Query: 960  TSSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXXX 781
            T    LE+T+ I+A+ +  +L ETI+KGDPR+  A+++W++PD+TSW + PS+ Q G   
Sbjct: 1014 TRDVHLERTAHILADIVFPLLSETIIKGDPRIKSASVIWISPDSTSWQKNPSRWQDGELA 1073

Query: 780  XXXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVER 601
                      KQ+GD WR V+D CLPV+HLIDTRRS+PY IKQ+QE++GISCAFDQ ++R
Sbjct: 1074 LDVCLEKSALKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMIQR 1133

Query: 600  LTTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTPR 421
            L+ S+ MV+KGVL +HLIL+ANSMTCTGN+IGFN+GGYKAL R+LN+Q+PFTEATLFTPR
Sbjct: 1134 LSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFTPR 1193

Query: 420  KCFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYNFLQ 244
            KCFEKAAEKCH DSLSS VASCS+GK VAVGTG+RF+ILW++KE+G  Q + VD+YNFL 
Sbjct: 1194 KCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQDDVVDVYNFLH 1253

Query: 243  IVRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPE-HPDGGKATFDDIAEFEPNSKPS 67
            +VR+G +E E  S CLGEEV+D+ +E E  +L LSPE      K  F+D AEFE +   +
Sbjct: 1254 MVRSGKSE-EPTSACLGEEVEDIMVEDEYGELTLSPEPFSTSEKPVFEDSAEFE-HCLDN 1311

Query: 66   QISEGNWGNNSSQTCESGGWGE 1
               E  W    S    S G G+
Sbjct: 1312 DPGESKWEKAPSLGAVSTGGGQ 1333


>ref|XP_011020393.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Populus
            euphratica] gi|743817375|ref|XP_011020394.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1-like [Populus
            euphratica] gi|743817379|ref|XP_011020395.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1-like [Populus
            euphratica] gi|743817383|ref|XP_011020396.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1-like [Populus
            euphratica]
          Length = 1916

 Score = 1649 bits (4270), Expect = 0.0
 Identities = 829/1342 (61%), Positives = 1036/1342 (77%), Gaps = 8/1342 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            M+EN  S +  +G +T I+F LA+ +EICT+SISDCPISH SQLTNPFLGLPLE GKCES
Sbjct: 1    MDENSQSSIF-DGEITGIRFGLATQKEICTASISDCPISHSSQLTNPFLGLPLEFGKCES 59

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKG--QIRKNGEKDK 3655
            CGT+EPG+C+GHFG+I LPIP+YHPSH+ ELKR+LS+ICLKCL++K+   QI+ NG  ++
Sbjct: 60   CGTSEPGKCEGHFGFIHLPIPIYHPSHISELKRMLSLICLKCLKLKRNKIQIKSNGVAER 119

Query: 3654 SSACTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTL 3478
              +C  C +   I++RE    DG+  LELK+P +S+LR   WNFLERYGF YG +  R L
Sbjct: 120  LLSC--CEECAQISIREVQNTDGACFLELKLPSRSRLRNGCWNFLERYGFRYGDDFTRPL 177

Query: 3477 LPCEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVS 3298
            LPCEV++ILKRI AET+KKL+ KGYFPQDGYILQ+LPVPPNCLSVP +SDG T+MSSD+S
Sbjct: 178  LPCEVMQILKRIPAETRKKLSGKGYFPQDGYILQQLPVPPNCLSVPVVSDGITVMSSDLS 237

Query: 3297 VSMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGV 3118
            +SMLKKVLKQAE+I+SSRSG PNF++H+ EA  LQS + QYL VRG+TK  R + +++GV
Sbjct: 238  ISMLKKVLKQAEVIRSSRSGAPNFDAHKDEATSLQSMVDQYLQVRGTTKTSRDVDTRYGV 297

Query: 3117 NNESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKV 2938
              ES  ++ KAW+EKM+TLFI KGSGFSSRSVITGDAY  V+++G+P EIAQ+ITFEE+V
Sbjct: 298  KKESSKSTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYTLVNQVGIPYEIAQRITFEERV 357

Query: 2937 TVHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRP 2758
            ++HNM +LQELVD KLCLTY+DG S YSL+EGSKGHT L+ GQVVHRRIMDGDIVFINRP
Sbjct: 358  SMHNMRYLQELVDNKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRP 417

Query: 2757 PSTHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSV 2578
            P+THKHSLQA SVY+HD+H VKINPLIC PL ADFDGDC+HLFYPQSLAAKAEVLELFSV
Sbjct: 418  PTTHKHSLQALSVYVHDDHAVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFSV 477

Query: 2577 EQQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGP 2398
            E+QLLSSHSG LNLQL  D+LLSLK+MFK  FL K+ AQQLAM++S  L  PALLK    
Sbjct: 478  EKQLLSSHSGNLNLQLTTDSLLSLKMMFKACFLGKSAAQQLAMFISPYLPQPALLKVNCF 537

Query: 2397 VPQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQ 2218
             P WTA QILQ ALPA F+CSGER++I  S  +K D+NRDVV S+ N+I+ ++F +KGS 
Sbjct: 538  FPHWTAHQILQMALPACFNCSGERFLIINSNFLKVDFNRDVVASVINEILISMFFEKGSG 597

Query: 2217 DALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEV 2038
              LK FNSLQP+LMEN+FSEG+SVSLEDF I +++ + + ++ + ISPLL +LRST+NE+
Sbjct: 598  AVLKFFNSLQPMLMENLFSEGFSVSLEDFSISRAVKQRIPESFKAISPLLCNLRSTFNEL 657

Query: 2037 VELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYT 1858
            VELQVENH+R VK PV  FIL SS  G LIDSKS++++ KVV           DRG++Y+
Sbjct: 658  VELQVENHIRDVKQPVREFILTSSAFGYLIDSKSDAAVTKVVQQIGFLGLQVSDRGKLYS 717

Query: 1857 RTLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRG 1678
            +TLVED+ + F  K+  +  D PS  +GLI++ FFHGL+ YE++  SIS+REV+VRSSRG
Sbjct: 718  KTLVEDLASHFLSKYPANLFDYPSAQYGLIQNSFFHGLDAYEEMAHSISTREVIVRSSRG 777

Query: 1677 LTEPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVL 1498
            L+EPGTLFKNLMAILRDVVICYDGTVRN  SNS+IQFDY V+ GTE +S  PAGEPVGVL
Sbjct: 778  LSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFDYGVKVGTESQSLFPAGEPVGVL 837

Query: 1497 AATAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYC 1318
            AATA+SNPAYKAVLD       SW++MKEI+LCKV  KNDL D R ILYLNDC CG+ YC
Sbjct: 838  AATAMSNPAYKAVLDSTPSSNSSWDMMKEILLCKVGFKNDLADRRVILYLNDCGCGRNYC 897

Query: 1317 KENAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGR 1138
            +E AAY V+NHL++ +LK IA  F++EY+ QQ   E+  ++A LVGH+HLD+ +++ +  
Sbjct: 898  QERAAYLVKNHLEKVSLKDIAKCFMIEYKSQQ-IPESFGSDAGLVGHVHLDKRKLQDLNI 956

Query: 1137 NVHQILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPPDAESSQVPCLQFSWQDT 958
                IL++CQE + S +KKK ++G + +   L VSE C F     ES   PCL F WQ  
Sbjct: 957  TAQVILEKCQETVNSFRKKK-KVGNLFKKTILLVSESCSFQQFIDES---PCLMFFWQGA 1012

Query: 957  SSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXXXX 778
                LE+TS I+A+ IC +LLETI+KGD R++ ANI+W  P+TT+W+R PS+ QKG    
Sbjct: 1013 DDVHLERTSNILADMICPVLLETIIKGDHRISCANIIWATPETTTWIRNPSRTQKGELAL 1072

Query: 777  XXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVERL 598
                     K+ GD WR V+DSCLPV+HLI+T RSIPY IKQ+QE++G+SCAFD AV+RL
Sbjct: 1073 DIVLEKSVVKKSGDAWRIVLDSCLPVLHLINTTRSIPYAIKQVQELLGVSCAFDTAVQRL 1132

Query: 597  TTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTPRK 418
            + S+ MVAKGVLKEHLIL+ NSMTC G+LIGF TGGYK L RSL++Q+PFTEATLFTPRK
Sbjct: 1133 SKSVTMVAKGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPFTEATLFTPRK 1192

Query: 417  CFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLD-QNAVDIYNFLQI 241
            CFEKAAEKCH DSLSS VASC++GK V VGTG+ F++LW+ KE  L+ + ++D Y+FL +
Sbjct: 1193 CFEKAAEKCHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPEGSMDAYSFLNM 1252

Query: 240  VRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPEH-PDGGKATFDDIAEFEPNSKPSQ 64
            VR+     E ++ CLG EVDD  L +ED D  LSPEH     K TF+D AEF+ +   +Q
Sbjct: 1253 VRSTAGGEESVTACLGAEVDD--LMLEDEDWNLSPEHNSSSDKPTFEDSAEFQ-DFLGNQ 1309

Query: 63   ISEGNWGNNSS---QTCESGGW 7
             +E NW   SS   +   SG W
Sbjct: 1310 PAESNWEKISSLKDRPRSSGNW 1331


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score = 1648 bits (4267), Expect = 0.0
 Identities = 827/1344 (61%), Positives = 1039/1344 (77%), Gaps = 10/1344 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            M+EN  S +  +G +T I+F LA+ +EICT+SISDCPISH SQLTNPFLGLPLE GKCES
Sbjct: 1    MDENSQSSIF-DGEITGIRFGLATQKEICTASISDCPISHSSQLTNPFLGLPLEFGKCES 59

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKG--QIRKNGEKDK 3655
            CGT+EPG+C+GHFG+I LPIP+YHPSH+ ELKR+LS+ICLKCL++K+   QI+ NG  ++
Sbjct: 60   CGTSEPGKCEGHFGFIHLPIPIYHPSHISELKRMLSLICLKCLKLKRNKIQIKSNGVAER 119

Query: 3654 SSACTHCL--DMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECR 3484
              +C      +   I++RE    DG+  LELK+P +S+LR+  WNFLERYGF YG +  R
Sbjct: 120  LLSCCEVSIKECAQISIREVKNTDGACFLELKLPSRSRLRDGCWNFLERYGFRYGDDFTR 179

Query: 3483 TLLPCEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSD 3304
             LLPCEV++ILKRI AET+KKL+ KGYFPQDGYILQ+LPVPPNCLSVP +SDG T+MSSD
Sbjct: 180  PLLPCEVMQILKRIPAETRKKLSGKGYFPQDGYILQQLPVPPNCLSVPVVSDGITVMSSD 239

Query: 3303 VSVSMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKF 3124
            +S+SMLKKVLKQAE+I+SSRSG PNF++H+ EA  LQS + QYL VRG+TK  R + +++
Sbjct: 240  LSISMLKKVLKQAEVIRSSRSGAPNFDAHKDEATSLQSMVDQYLQVRGTTKTSRDVDTRY 299

Query: 3123 GVNNESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEE 2944
            GV  ES +++ KAW+EKM+TLFI KGSGFSSRSVITGDAY  V+++G+P EIAQ+ITFEE
Sbjct: 300  GVKKESSESTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYTLVNQVGIPYEIAQRITFEE 359

Query: 2943 KVTVHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFIN 2764
            +V+VHNM +LQELVD KLCLTY+DG S YSL+EGSKGHT L+ GQVVHRRIMDGDIVFIN
Sbjct: 360  RVSVHNMRYLQELVDNKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFIN 419

Query: 2763 RPPSTHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELF 2584
            RPP+THKHSLQA SVY+HD+H VKINPLIC PL ADFDGDC+HLFYPQSLAAKAEVLELF
Sbjct: 420  RPPTTHKHSLQALSVYVHDDHAVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELF 479

Query: 2583 SVEQQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKAC 2404
            SVE+QLLSSHSG LNLQL  D+LLSLK+MFK  FL K+ AQQLAM++S  L  PALLK  
Sbjct: 480  SVEKQLLSSHSGNLNLQLTTDSLLSLKMMFKACFLGKSAAQQLAMFISPYLPQPALLKVN 539

Query: 2403 GPVPQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKG 2224
               P WTA QILQ ALPA F+CSGER++I  S  +K D+NRDVV S+ N+I+ ++F +KG
Sbjct: 540  CFFPHWTAHQILQMALPACFNCSGERFLIINSNFLKVDFNRDVVASVINEILISMFFEKG 599

Query: 2223 SQDALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYN 2044
            S   LK FNSLQP+LMEN+FSEG+SVSLEDF I +++ + + ++ + ISPLL +LRST+N
Sbjct: 600  SGAVLKFFNSLQPMLMENLFSEGFSVSLEDFSISRAVKQRIPESFKAISPLLCNLRSTFN 659

Query: 2043 EVVELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRI 1864
            E+VELQVENH+R VK PV  FIL SS LG LIDSKS++++ KVV           DRG++
Sbjct: 660  ELVELQVENHIRDVKQPVREFILTSSALGYLIDSKSDAAVTKVVQQIGFLGLQVSDRGKL 719

Query: 1863 YTRTLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSS 1684
            Y++TLVED+ + F  K+  +  D PS  +GLI++ FFHGL+ YE++  SIS+REV+VRSS
Sbjct: 720  YSKTLVEDLASHFLSKYPANLFDYPSAQYGLIQNSFFHGLDAYEEMAHSISTREVIVRSS 779

Query: 1683 RGLTEPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVG 1504
            RGL+EPGTLFKNLMAILRDVVICYDGTVRN  SNS+IQF+Y V+ GTE +S  PAGEPVG
Sbjct: 780  RGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGVKVGTESQSLFPAGEPVG 839

Query: 1503 VLAATAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKK 1324
            VLAATA+SNPAYKAVLD       SW++MKEI+LCKV  KNDL D R ILYLNDC CG+ 
Sbjct: 840  VLAATAMSNPAYKAVLDSTPSSNCSWDMMKEILLCKVGFKNDLADRRVILYLNDCGCGRN 899

Query: 1323 YCKENAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYV 1144
            YC+E AAY V+NHL++ +LK IA  F++EY+ QQ   E+  ++A LVGH+HLD+ +++ +
Sbjct: 900  YCQERAAYLVKNHLEKVSLKDIAKCFMIEYKSQQ-IPESFGSDAGLVGHVHLDKRKLQDL 958

Query: 1143 GRNVHQILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPPDAESSQVPCLQFSWQ 964
                  IL++CQE + + +KKK ++G + +   L VSE C F     ES   PCL F WQ
Sbjct: 959  NITAQVILEKCQETVNTFRKKK-KVGNLFKKTILLVSESCSFQQCIDES---PCLMFFWQ 1014

Query: 963  DTSSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXX 784
                  LE+TS I+A+ IC +LLETI+KGD R++ ANI+W  P+T +W+R PS+ QKG  
Sbjct: 1015 GADDVHLERTSNILADMICPVLLETIIKGDHRISCANIIWATPETNTWIRNPSRTQKGEL 1074

Query: 783  XXXXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVE 604
                       K+ GD WR V+DSCLPV+HLI+T RSIPY IKQ+QE++G+SCAFD AV+
Sbjct: 1075 ALDIVLEKSVVKKSGDAWRIVLDSCLPVLHLINTTRSIPYAIKQVQELLGVSCAFDTAVQ 1134

Query: 603  RLTTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTP 424
            RL+ S+ MVAKGVLKEHLIL+ NSMTC G+LIGF TGGYK L RSL++Q+PFTEATLFTP
Sbjct: 1135 RLSKSVTMVAKGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPFTEATLFTP 1194

Query: 423  RKCFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLD-QNAVDIYNFL 247
            RKCFEKAAEKCH DSLSS VASC++GK V VGTG+ F++LW+ KE  L+ + ++D+Y+FL
Sbjct: 1195 RKCFEKAAEKCHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPEGSMDVYSFL 1254

Query: 246  QIVRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPEH-PDGGKATFDDIAEFEPNSKP 70
             +VR+     E ++ CLG EVDD  L +ED D  LSPEH     K TF+D AEF+ +   
Sbjct: 1255 NMVRSTAGGEESVTACLGAEVDD--LMLEDEDWNLSPEHNSSSDKPTFEDSAEFQ-DFLG 1311

Query: 69   SQISEGNWGNNSS---QTCESGGW 7
            +Q +E NW   SS   ++  SG W
Sbjct: 1312 NQPAESNWEKISSLKDRSRSSGNW 1335


>ref|XP_010032299.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Eucalyptus
            grandis] gi|702477429|ref|XP_010032300.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1 [Eucalyptus
            grandis] gi|629085358|gb|KCW51715.1| hypothetical protein
            EUGRSUZ_J01182 [Eucalyptus grandis]
          Length = 1814

 Score = 1627 bits (4212), Expect = 0.0
 Identities = 797/1346 (59%), Positives = 1044/1346 (77%), Gaps = 10/1346 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEE  ++ L AE  +T+I F LAS QEIC +S+SDC I+H SQL+NPFLGLPLE G+CES
Sbjct: 1    MEETSTAALDAE--ITAISFGLASRQEICAASVSDCSITHSSQLSNPFLGLPLEFGRCES 58

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQIR-KNGEKDKS 3652
            CGT++PG+C+GHFGYI+LPIP+YHPSH+ ELKR+LS++CLKCL+M+  +   KN    + 
Sbjct: 59   CGTSDPGKCEGHFGYIELPIPIYHPSHVSELKRMLSLLCLKCLKMRNNKFPIKNAGVGER 118

Query: 3651 SACTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLL 3475
               + C D   +++RE    +G  CL+LKV  +S+LR+  WNFLERYGF YG    R LL
Sbjct: 119  LLASCCEDAAQVSMREVKTSEGVHCLQLKVSSRSRLRDGFWNFLERYGFRYGDNISRPLL 178

Query: 3474 PCEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSV 3295
            PCEV+E+LKRI  ETK+KLA KGYFPQ+GYI+Q LPVPPNCLSVP++SDG ++MSSD+SV
Sbjct: 179  PCEVVEMLKRIPEETKRKLAGKGYFPQEGYIIQYLPVPPNCLSVPEVSDGVSVMSSDLSV 238

Query: 3294 SMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVN 3115
            +MLKKVLKQ EIIK SRSG PNFESH+VEA +LQ+ + +YL VRG+ K  R I +++G+ 
Sbjct: 239  TMLKKVLKQVEIIKGSRSGAPNFESHDVEAQDLQNVVNEYLLVRGTAKASRDIDTRYGIG 298

Query: 3114 NESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVT 2935
             E  DT+ KAW+EKM+TLFI KGSGFSSRSVITGDA+K+V+EIG+P+EIAQ+ITFEEKV+
Sbjct: 299  KEPSDTATKAWLEKMRTLFIRKGSGFSSRSVITGDAFKKVNEIGIPAEIAQRITFEEKVS 358

Query: 2934 VHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPP 2755
            ++NM++LQ LVDKKLCL YRDG +MYSL+EGSKGHTSL+ GQVVHRRIMDGDIVFINRPP
Sbjct: 359  MYNMDYLQGLVDKKLCLAYRDGSAMYSLREGSKGHTSLRPGQVVHRRIMDGDIVFINRPP 418

Query: 2754 STHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVE 2575
            +THKHSLQA SVY+HD+HTVKINPLIC PLGADFDGDC+HLFYPQS +AKAEV+ELFSVE
Sbjct: 419  TTHKHSLQALSVYVHDDHTVKINPLICGPLGADFDGDCVHLFYPQSASAKAEVVELFSVE 478

Query: 2574 QQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPV 2395
            +QLLSSHSG LNLQLA D+LLSLK+MF+KYF  K  AQQLAM+VSS L  PALLKA    
Sbjct: 479  KQLLSSHSGNLNLQLATDSLLSLKMMFRKYFFDKLAAQQLAMFVSSDLPHPALLKAHQFC 538

Query: 2394 PQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQD 2215
            P WTALQ+LQ ALPA F+C G++Y+I +S+++  DY+R+ +  + ++I+ ++F +K   +
Sbjct: 539  PTWTALQMLQTALPAGFNCCGDKYLISKSDLLDVDYSREFIVPMISEIVTSIFFEKSPVE 598

Query: 2214 ALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVV 2035
             LK F++LQPLLMEN+F+EG+SV LEDF IP+S+ +++QKN+Q ISPLLYHLR+T+NE+V
Sbjct: 599  VLKFFDALQPLLMENLFTEGFSVCLEDFYIPQSMIQDIQKNIQVISPLLYHLRTTHNELV 658

Query: 2034 ELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTR 1855
            +LQ+ENHLR  K+P+  FILKSS LG+L+DSKS+S+INK++           D+G+ Y+ 
Sbjct: 659  QLQLENHLRLAKLPLSRFILKSSALGDLVDSKSDSAINKIIQQIGFLGVQISDKGKFYST 718

Query: 1854 TLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGL 1675
            +L ++M + F+ K+   G D PS  +GLI+S F  GL+PYE +V SI +REV+VRS+RGL
Sbjct: 719  SLFDEMASLFRSKYFFEGADYPSGEYGLIKSSFICGLDPYEMMVHSICTREVIVRSTRGL 778

Query: 1674 TEPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVLA 1495
            +EPGTLFKNLMAILRDVVICYDGTVRN CSNS+IQF+Y  E G +  +  PAGEPVGVLA
Sbjct: 779  SEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGSEVGGKPENLFPAGEPVGVLA 838

Query: 1494 ATAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYCK 1315
            ATA+SNPAYKAVLD       SWELMKEI+ C+VN +N+  D R ILYLN C CG+K+C 
Sbjct: 839  ATAMSNPAYKAVLDSSPSSNSSWELMKEILQCRVNFRNEPIDRRVILYLNRCGCGRKHCS 898

Query: 1314 ENAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGRN 1135
            ENAA  V+ HLK+ +LK +   F++EY++ Q  +E+ + +A LVGHIHLDE  +K +  +
Sbjct: 899  ENAACLVKTHLKKVSLKDLTVGFMIEYKELQTVLESSEAHAGLVGHIHLDEVHLKELNIS 958

Query: 1134 VHQILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPPDAES-SQVPCLQFSWQDT 958
            +  +L++CQE I S +KKK ++G + +   LSVS+ C F P  A   SQ+PCL FS  D 
Sbjct: 959  MVDVLKQCQETINSFRKKK-KVGNLFKGTVLSVSDGCSFQPQCAGGRSQMPCLMFSCLDA 1017

Query: 957  SSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXXXX 778
            +   LE+ + ++AN IC ++L+TI+KGDPR++ ANIVW+NPDTTSW+R   + QKG    
Sbjct: 1018 NDPQLEKITHVLANKICPVILDTIIKGDPRISSANIVWINPDTTSWIRNSRRNQKGELAL 1077

Query: 777  XXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVERL 598
                     K+ GD WR V+DSCLPV+HLIDT+RSIPY IKQ++E++GISCAFDQA++RL
Sbjct: 1078 DIVLEKSVCKRSGDAWRIVLDSCLPVLHLIDTKRSIPYAIKQVEELLGISCAFDQAIQRL 1137

Query: 597  TTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTPRK 418
            +TS+ MVAKGVLKEHL+L+A+SMTC+G+LIGFN+ GYKA  +SLNVQ+PFTEATLFTPR+
Sbjct: 1138 STSVAMVAKGVLKEHLMLLADSMTCSGSLIGFNSAGYKAFSQSLNVQVPFTEATLFTPRR 1197

Query: 417  CFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLD---QNAVDIYNFL 247
            CFE+A+ KCH+D+LSS VASCS+GKRVAVGTG++F+ILW  K+ G+D   + A D+Y+FL
Sbjct: 1198 CFERASVKCHVDALSSVVASCSWGKRVAVGTGSKFDILWGTKD-GVDSKQEGAADVYSFL 1256

Query: 246  QIVRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHPDGGKATFDDIAEFEPNSKPS 67
             +VR  + +    S CLG +V+ ++ E E+ +L  SPE+ +  K  F+D  + +P  K +
Sbjct: 1257 HMVRGPSMQATGDSTCLGIDVEHLDWEDENTELNRSPEN-NSEKPVFED--DVQPWDKVT 1313

Query: 66   QISE----GNWGNNSSQTCESGGWGE 1
             + +     +W  N   +   G  G+
Sbjct: 1314 SVDDWDASASWEKNGKDSTTPGNNGQ 1339


>ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis] gi|743822629|ref|XP_010932323.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis] gi|743822631|ref|XP_010932324.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
          Length = 1708

 Score = 1624 bits (4206), Expect = 0.0
 Identities = 820/1335 (61%), Positives = 1028/1335 (77%), Gaps = 10/1335 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEE+  S LI++G +  I FS A+ +EI T SI+DCP+SHPSQLTNPFLGLPLE GKCES
Sbjct: 1    MEEHVPSPLISDGSVRGISFSAATIEEIRTCSINDCPVSHPSQLTNPFLGLPLEFGKCES 60

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQIRKNGEKDK-- 3655
            CGTAEPG+C+GHFGYI+LP+PVYHPSH+ EL+++LS++CLKC+RMK G+++    K+K  
Sbjct: 61   CGTAEPGKCEGHFGYIELPVPVYHPSHVSELRQILSLVCLKCMRMK-GKVKHGNGKEKVT 119

Query: 3654 SSACTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTL 3478
            +++C +C D+PPI+V+E    D + CLEL+V  +++LR+  W FL+R+GF YG   CR L
Sbjct: 120  TTSCLYCRDLPPISVKEVKTTDNALCLELRVSSRTRLRDGFWKFLDRFGFCYGDTYCRPL 179

Query: 3477 LPCEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVS 3298
            LP E L ILK I  ETKK+LAAKGYFPQ G+ILQ LPVPPNCL VP++SDG +IMSSD+S
Sbjct: 180  LPYEALNILKEIPQETKKRLAAKGYFPQIGFILQYLPVPPNCLCVPEVSDGKSIMSSDIS 239

Query: 3297 VSMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGV 3118
            +S+LK+VL + E+IK SRSG PNF+SHEVE+N+LQS+I+QY+H+RG+ K P+ I  KF +
Sbjct: 240  ISLLKRVLNKIELIKRSRSGFPNFKSHEVESNDLQSSISQYMHLRGTPKVPQDITKKFAI 299

Query: 3117 NNESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKV 2938
              E+++ S K W+EKM+TLFI KGSGFSSRSVITGDAY  V+ IGLPSEIA++ITFEE+V
Sbjct: 300  GTEANECSTKLWLEKMRTLFIRKGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEERV 359

Query: 2937 TVHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRP 2758
            TVHNM  LQE+VDK LC+TY+DG S Y++  GSKGHT LKVGQV++RRIMDGDIVFINRP
Sbjct: 360  TVHNMKQLQEVVDKGLCVTYKDGFSTYAIAVGSKGHTYLKVGQVINRRIMDGDIVFINRP 419

Query: 2757 PSTHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSV 2578
            PSTHKHSLQAF VY+HD+HTVKINPLIC+PLGADFDGDC+H+FYPQSLAAKAEVLELFSV
Sbjct: 420  PSTHKHSLQAFYVYVHDDHTVKINPLICAPLGADFDGDCVHIFYPQSLAAKAEVLELFSV 479

Query: 2577 EQQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGP 2398
            E+QLLSSH+G LNLQL +D LL+LK+M    FL+K TA+QLAM+VS  L  PA+ KA   
Sbjct: 480  EKQLLSSHTGNLNLQLVHDTLLALKLMSNAAFLRKTTAEQLAMFVSPILPPPAIFKAHKS 539

Query: 2397 VPQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQ 2218
             P WT  QILQNALP   DC GER++I   EI+K D  RD VQS+F +II ++F+ KG +
Sbjct: 540  GPFWTVHQILQNALPTFLDCFGERHLISNGEIIKLDLRRDAVQSLFTEIITSIFIMKGPK 599

Query: 2217 DALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEV 2038
            +AL  FN LQPLLME +  EG+S+SL+DF +P ++  + Q++VQ+ S +L  LRS YNE+
Sbjct: 600  EALNFFNMLQPLLMEVLVMEGFSISLQDFYVPSAVIEKAQQSVQENSFILDQLRSKYNEL 659

Query: 2037 VELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYT 1858
            VELQVENHL+ +K+P+VNFIL  ++LGNLIDSKS+SSI KVV          FDRG++Y+
Sbjct: 660  VELQVENHLKSIKLPIVNFILNLTSLGNLIDSKSDSSIIKVVQQLGFLGLQLFDRGKLYS 719

Query: 1857 RTLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRG 1678
            R LVED    F  K++ SG D   EA+GL+++CFFHGLNPYE+LV +ISSREV+VRSSRG
Sbjct: 720  RALVEDCFTNFVNKYSTSGADHSCEAYGLVKNCFFHGLNPYEELVHAISSREVIVRSSRG 779

Query: 1677 LTEPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVL 1498
            LTEPGTLFKNLMAILRDV+ICYDG+VRN CSNS+IQF+Y  + G    + SPAGEPVGVL
Sbjct: 780  LTEPGTLFKNLMAILRDVIICYDGSVRNVCSNSIIQFEYGEDDGANSLNVSPAGEPVGVL 839

Query: 1497 AATAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYC 1318
            AATAISNPAYKAVL+       SWELMKEI+LCKV  KN + D R ILYLNDC CGKK+C
Sbjct: 840  AATAISNPAYKAVLESSQSNNSSWELMKEILLCKVTFKNVVTDRRVILYLNDCLCGKKFC 899

Query: 1317 KENAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGR 1138
            KENAA +VQN LKR  LK  A  F +EY+K+    ++ +T + LVGHIHLD+  +K + R
Sbjct: 900  KENAAIAVQNCLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMRLKLLNR 959

Query: 1137 NVHQILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPPDAES-SQVPCLQFSWQD 961
            +  +IL++CQ+ I    KKK +L    R + LS+SECC    PD  + S  PCLQFS++D
Sbjct: 960  SPDEILRKCQDVIFGYGKKKGKLSHFFRRIILSLSECCSTRQPDVGNLSPFPCLQFSYRD 1019

Query: 960  TSSC----TLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQK 793
             S+     +LE    +MAN+IC ILL+TI+KGDPRV+ ANIVW  PD TSWVR   K  K
Sbjct: 1020 QSTTPDCESLEGAIHVMANTICPILLDTIIKGDPRVHEANIVWTGPDATSWVRNSCKTLK 1079

Query: 792  GXXXXXXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQ 613
            G             +++GD WRTV+D+CLPVIHLI+TRRSIPYGI+QLQE++GISCAFDQ
Sbjct: 1080 GEVAIEVVVEKDAVRRNGDAWRTVIDACLPVIHLINTRRSIPYGIQQLQELLGISCAFDQ 1139

Query: 612  AVERLTTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATL 433
             V+RL+ SI  VAKGVLK HLILVANSMTCTGNLIGFNT GYKALFRSL VQ+PFTEATL
Sbjct: 1140 TVQRLSASITKVAKGVLKGHLILVANSMTCTGNLIGFNTAGYKALFRSLKVQVPFTEATL 1199

Query: 432  FTPRKCFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQN-AVDIY 256
             TP KCFE+AAEKCH DSL S V+SC +GK VA+GTG+ F+ILWNK++M  +QN     Y
Sbjct: 1200 ITPMKCFERAAEKCHTDSLVSVVSSCLWGKHVAIGTGSPFQILWNKQQMAENQNIGKGFY 1259

Query: 255  NFLQIVRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHPDGGKATFDDIAEFEPNS 76
            +FL++VRT +++ E   GC   +VDD+E+  E+ ++ LSPE     + TFDD  + + N 
Sbjct: 1260 DFLELVRT-SSQREAGDGC-SLDVDDLEVN-ENNEVCLSPE-IGFEELTFDDGFDIDYNC 1315

Query: 75   KPS-QISEGNWGNNS 34
            K    +  G  GN+S
Sbjct: 1316 KKDVSMENGKVGNSS 1330


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao] gi|508727914|gb|EOY19811.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            3 [Theobroma cacao]
          Length = 1675

 Score = 1623 bits (4203), Expect = 0.0
 Identities = 819/1326 (61%), Positives = 1027/1326 (77%), Gaps = 5/1326 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEEN S+  + +G +  I F LA+ +EI T+SIS  PI+H SQL+N +LGLPLE GKC +
Sbjct: 1    MEENSSASTV-DGEIVGIGFCLATPREIFTASISGFPINHVSQLSNSYLGLPLEFGKCNA 59

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMK-KGQIRKNGEKDKS 3652
            CGT+EPG+C+GHFGYI+LPIP+YHPSH+ ELKRLLS++CLKCLRMK K QI+     D+ 
Sbjct: 60   CGTSEPGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLRMKNKFQIKSGSISDRL 119

Query: 3651 SACTHCLDMPPITVRESNLKDGSFCLELKVPKSKLRESMWNFLERYGFIYG-YEECRTLL 3475
             A   C + P ++++E    DG+  LELK P  + R S W FLE+YGF YG +   RTLL
Sbjct: 120  LASC-CENAPQVSIKEVKTTDGACSLELKQPSRQARTS-WEFLEKYGFRYGDHHNTRTLL 177

Query: 3474 PCEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSV 3295
            PCEV+EILKRI AET++KL+ KG+FPQ+GYIL+ LPVPPNCLSVPDISDG +IMSSD+S 
Sbjct: 178  PCEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLST 237

Query: 3294 SMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVN 3115
            +MLKKVLKQ EIIKSSRSG PNFESHEVEAN+LQSA+ QYL VRG+ K  R I +++G++
Sbjct: 238  AMLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGIS 297

Query: 3114 NESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVT 2935
             ++ D+S KAW+EKM+TLFI KGSGFSSR VITGD YK+V+EIG+PSEIAQ+ITFEE+V 
Sbjct: 298  KDASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVN 357

Query: 2934 VHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPP 2755
            +HNM +LQ LVD KLCLTYRDG S YSL+EGSKGHT L+ GQVVHRRIMDGDIVFINRPP
Sbjct: 358  MHNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPP 417

Query: 2754 STHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVE 2575
            +THKHSLQA SVY+HD+HTVKINPLIC PL ADFDGDCIHLFYPQSLAAKAEV ELFSVE
Sbjct: 418  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVE 477

Query: 2574 QQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPV 2395
            +QLLSSH+G LNLQLA D+LLSL++M K    KKA AQQL+M++SS L  PA LK     
Sbjct: 478  KQLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFG 537

Query: 2394 PQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQD 2215
            P WTALQILQ A PA  DCSG+RY+I +S+I+  D++RD++QS+ N+++ ++F +KG ++
Sbjct: 538  PCWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKE 597

Query: 2214 ALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVV 2035
             L  F+SLQPLLMEN+F+EG+SVSLEDF + + + + +QK++Q ISPLLY LRSTYNE+V
Sbjct: 598  VLNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELV 657

Query: 2034 ELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTR 1855
             LQ+ENH+R  K PV NFIL SS LG+LIDSKS+S++NKVV           ++G+ Y++
Sbjct: 658  GLQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSK 717

Query: 1854 TLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGL 1675
            TLVED+   FQ  +   G+D PS  FGLI+SCFFHGL+PYE +V SIS+REV+VRSSRGL
Sbjct: 718  TLVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGL 777

Query: 1674 TEPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVLA 1495
            +EPGTLFKNLMAILRDVVICYDGTVRN  SNS+IQF Y + A T+ +   PAGEPVGVLA
Sbjct: 778  SEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLNARTKPQ--FPAGEPVGVLA 835

Query: 1494 ATAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYCK 1315
            ATA+SNPAYKAVLD       SWELMKEI+LCKV++KNDL D R ILYL DC CG+KYC+
Sbjct: 836  ATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQ 895

Query: 1314 ENAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGRN 1135
            ENAAY V+NHL++  LK  A   + EY++QQ   E   + A LVGHI L++A +K +  +
Sbjct: 896  ENAAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSE---SEAGLVGHILLNKAVLKELNIS 952

Query: 1134 VHQILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPP-DAESSQVPCLQFSWQDT 958
            + ++  +CQE I S +KKK       R+  L  SECC        +   + CL F  ++T
Sbjct: 953  MQEVHMKCQETIISFRKKKKTADTFKRT-DLFFSECCSIQQSCGGKWLDMSCLMFFCRNT 1011

Query: 957  SSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXXXX 778
                L+ T Q + + I  +LLET++KGDPR+  ANI+WV+PDTT+W+R PSK QKG    
Sbjct: 1012 KDDHLDCTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTTWIRSPSKTQKGELAL 1071

Query: 777  XXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVERL 598
                     KQ+GD WRTV+D CLPVI+LIDT+RSIPY IKQ+QE++GISCAF+QAV+RL
Sbjct: 1072 DVVLEKSAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRL 1131

Query: 597  TTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTPRK 418
            +TS+ MVA+GVLKEHLIL+ANSMTC GNLIGFN+GGYKAL RSLN+Q+PF+EATLFTPRK
Sbjct: 1132 STSVSMVARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRK 1191

Query: 417  CFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYNFLQI 241
            CFE+AAEKCH+DSLSS VASCS+GK VAVGTG+RF++LW++KE+G DQ + +D+YNFL +
Sbjct: 1192 CFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLHM 1251

Query: 240  VRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHPDG-GKATFDDIAEFEPNSKPSQ 64
            + + +      + CLGEEVDD+      A+ +LSPEH +G  K  F+D A+FE N    Q
Sbjct: 1252 LSSASGPSSTTT-CLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFE-NDLDFQ 1309

Query: 63   ISEGNW 46
             +E +W
Sbjct: 1310 PAESSW 1315


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score = 1623 bits (4203), Expect = 0.0
 Identities = 819/1326 (61%), Positives = 1027/1326 (77%), Gaps = 5/1326 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEEN S+  + +G +  I F LA+ +EI T+SIS  PI+H SQL+N +LGLPLE GKC +
Sbjct: 1    MEENSSASTV-DGEIVGIGFCLATPREIFTASISGFPINHVSQLSNSYLGLPLEFGKCNA 59

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMK-KGQIRKNGEKDKS 3652
            CGT+EPG+C+GHFGYI+LPIP+YHPSH+ ELKRLLS++CLKCLRMK K QI+     D+ 
Sbjct: 60   CGTSEPGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLRMKNKFQIKSGSISDRL 119

Query: 3651 SACTHCLDMPPITVRESNLKDGSFCLELKVPKSKLRESMWNFLERYGFIYG-YEECRTLL 3475
             A   C + P ++++E    DG+  LELK P  + R S W FLE+YGF YG +   RTLL
Sbjct: 120  LASC-CENAPQVSIKEVKTTDGACSLELKQPSRQARTS-WEFLEKYGFRYGDHHNTRTLL 177

Query: 3474 PCEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSV 3295
            PCEV+EILKRI AET++KL+ KG+FPQ+GYIL+ LPVPPNCLSVPDISDG +IMSSD+S 
Sbjct: 178  PCEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLST 237

Query: 3294 SMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVN 3115
            +MLKKVLKQ EIIKSSRSG PNFESHEVEAN+LQSA+ QYL VRG+ K  R I +++G++
Sbjct: 238  AMLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGIS 297

Query: 3114 NESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVT 2935
             ++ D+S KAW+EKM+TLFI KGSGFSSR VITGD YK+V+EIG+PSEIAQ+ITFEE+V 
Sbjct: 298  KDASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVN 357

Query: 2934 VHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPP 2755
            +HNM +LQ LVD KLCLTYRDG S YSL+EGSKGHT L+ GQVVHRRIMDGDIVFINRPP
Sbjct: 358  MHNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPP 417

Query: 2754 STHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVE 2575
            +THKHSLQA SVY+HD+HTVKINPLIC PL ADFDGDCIHLFYPQSLAAKAEV ELFSVE
Sbjct: 418  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVE 477

Query: 2574 QQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPV 2395
            +QLLSSH+G LNLQLA D+LLSL++M K    KKA AQQL+M++SS L  PA LK     
Sbjct: 478  KQLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFG 537

Query: 2394 PQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQD 2215
            P WTALQILQ A PA  DCSG+RY+I +S+I+  D++RD++QS+ N+++ ++F +KG ++
Sbjct: 538  PCWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKE 597

Query: 2214 ALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVV 2035
             L  F+SLQPLLMEN+F+EG+SVSLEDF + + + + +QK++Q ISPLLY LRSTYNE+V
Sbjct: 598  VLNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELV 657

Query: 2034 ELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTR 1855
             LQ+ENH+R  K PV NFIL SS LG+LIDSKS+S++NKVV           ++G+ Y++
Sbjct: 658  GLQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSK 717

Query: 1854 TLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGL 1675
            TLVED+   FQ  +   G+D PS  FGLI+SCFFHGL+PYE +V SIS+REV+VRSSRGL
Sbjct: 718  TLVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGL 777

Query: 1674 TEPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVLA 1495
            +EPGTLFKNLMAILRDVVICYDGTVRN  SNS+IQF Y + A T+ +   PAGEPVGVLA
Sbjct: 778  SEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLNARTKPQ--FPAGEPVGVLA 835

Query: 1494 ATAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYCK 1315
            ATA+SNPAYKAVLD       SWELMKEI+LCKV++KNDL D R ILYL DC CG+KYC+
Sbjct: 836  ATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQ 895

Query: 1314 ENAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGRN 1135
            ENAAY V+NHL++  LK  A   + EY++QQ   E   + A LVGHI L++A +K +  +
Sbjct: 896  ENAAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSE---SEAGLVGHILLNKAVLKELNIS 952

Query: 1134 VHQILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPP-DAESSQVPCLQFSWQDT 958
            + ++  +CQE I S +KKK       R+  L  SECC        +   + CL F  ++T
Sbjct: 953  MQEVHMKCQETIISFRKKKKTADTFKRT-DLFFSECCSIQQSCGGKWLDMSCLMFFCRNT 1011

Query: 957  SSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXXXX 778
                L+ T Q + + I  +LLET++KGDPR+  ANI+WV+PDTT+W+R PSK QKG    
Sbjct: 1012 KDDHLDCTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTTWIRSPSKTQKGELAL 1071

Query: 777  XXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVERL 598
                     KQ+GD WRTV+D CLPVI+LIDT+RSIPY IKQ+QE++GISCAF+QAV+RL
Sbjct: 1072 DVVLEKSAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRL 1131

Query: 597  TTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTPRK 418
            +TS+ MVA+GVLKEHLIL+ANSMTC GNLIGFN+GGYKAL RSLN+Q+PF+EATLFTPRK
Sbjct: 1132 STSVSMVARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRK 1191

Query: 417  CFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYNFLQI 241
            CFE+AAEKCH+DSLSS VASCS+GK VAVGTG+RF++LW++KE+G DQ + +D+YNFL +
Sbjct: 1192 CFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLHM 1251

Query: 240  VRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHPDG-GKATFDDIAEFEPNSKPSQ 64
            + + +      + CLGEEVDD+      A+ +LSPEH +G  K  F+D A+FE N    Q
Sbjct: 1252 LSSASGPSSTTT-CLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFE-NDLDFQ 1309

Query: 63   ISEGNW 46
             +E +W
Sbjct: 1310 PAESSW 1315


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score = 1621 bits (4197), Expect = 0.0
 Identities = 822/1334 (61%), Positives = 1035/1334 (77%), Gaps = 9/1334 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEEN SS ++ EG++  I+F LA+ +EICT+SISDC ISH SQL NPFLGLPLE GKCES
Sbjct: 1    MEENTSSTIL-EGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCES 59

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMK--KGQIRKNGEKDK 3655
            CGT+EPG+C+GHFGYI+LPIP+YHPSH+ ELKR+LS++CLKCL+MK  K QI+ +G   +
Sbjct: 60   CGTSEPGKCEGHFGYIELPIPIYHPSHISELKRMLSLLCLKCLKMKSTKLQIKNDGVAQR 119

Query: 3654 S-SACTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRT 3481
              S+C  C +   +++ +    DG+F LELK+P K +L    WNFLERYGF YG    RT
Sbjct: 120  LLSSC--CEEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSLTRT 177

Query: 3480 LLPCEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDV 3301
            LL  EV E+LKRI  ET+KKLA KGYFPQDGYIL+ LPVPPNCLSVPDISDG + MSSD+
Sbjct: 178  LLASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDL 237

Query: 3300 SVSMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFG 3121
            S++MLKKVLKQ EII+SSRSG PNFES EVE+N+LQ A+ QYL VRG+ K  R + ++FG
Sbjct: 238  SIAMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFG 297

Query: 3120 VNNESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEK 2941
            V+ + + T+ KAW+EKM+TLFI KGSGFSSRSVITGDAYKRV+EIG+P EIAQ+ITFEE+
Sbjct: 298  VSQDPNSTT-KAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEER 356

Query: 2940 VTVHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINR 2761
            V VHN+N+LQELVD KLCLTY DG S YSL+EGSKGHT L+ GQVVHRRIMDGD VFINR
Sbjct: 357  VNVHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINR 416

Query: 2760 PPSTHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFS 2581
            PP+THKHSLQA SVY+HD+HTVKINPLIC PL ADFDGDCIHLFYPQSLAAKAEVLELFS
Sbjct: 417  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 476

Query: 2580 VEQQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACG 2401
            VE+QLLSSH+G LNLQLA DALLSLK+MFKKYFL KA AQQLAM+  S L  PAL KA  
Sbjct: 477  VEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFALSPLPRPALSKAHC 536

Query: 2400 PVPQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGS 2221
              P+WTALQILQ+ LP  FD  G+RY+I++SE++  D++RD + S+ N+I+ ++F +KG 
Sbjct: 537  SGPRWTALQILQSVLPPGFDSCGDRYLIKKSEVLNGDFDRDTIPSVINEIVTSIFFEKGP 596

Query: 2220 QDALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNE 2041
            ++ L+ F+SLQPLLMEN+F++G+SVSLEDF + K+    +QK +Q +  LLYH  ST NE
Sbjct: 597  EEVLEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALWNIQKEIQALYSLLYHRMSTQNE 656

Query: 2040 VVELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIY 1861
            +V+LQ+ENH+R VK+ V  FILKSSTLG LIDSKS+S+++KVV           DRG+ Y
Sbjct: 657  LVDLQIENHIRHVKMLVAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFY 716

Query: 1860 TRTLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSR 1681
            ++TLVED+ + F++ + +  ++ P+  +GLI+ CFFHGL+PYE++  SIS+REV+VRSSR
Sbjct: 717  SKTLVEDIASHFERIYPMD-LNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSR 775

Query: 1680 GLTEPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGV 1501
            GL+EPGTLFKNLMA+LRDVVICYDGTVRN CSNS+IQFDY V A  +  S  PAGEPVGV
Sbjct: 776  GLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNA-RKSHSLFPAGEPVGV 834

Query: 1500 LAATAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKY 1321
            LAATA+SNPAYKAVLD       SWELMKEI+LC+V+  ND  D R ILYLNDC CG+KY
Sbjct: 835  LAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKY 894

Query: 1320 CKENAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVG 1141
            C+E AAY V+N LKR +LK  A  FL+EY+K +  I + D    LVGHIHL++  ++ + 
Sbjct: 895  CQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPE--IISDDEG--LVGHIHLNKILLEDLR 950

Query: 1140 RNVHQILQRCQEKIGSI--KKKKDRLGRILRSLTLSVSECCYFSPPDAES-SQVPCLQFS 970
             ++H IL +CQE + S   KKK  ++ +  ++ +LS+SECC F    A+  S +PCL F 
Sbjct: 951  ISMHDILPKCQETLKSFCKKKKMKKVVQFFKNTSLSISECCSFQQSCADKRSNMPCLMFV 1010

Query: 969  WQDTSSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKG 790
             +  S   L++ S ++AN I  +LLETI+KGDPR+  ANI+W++PDTT+W+R PSK +KG
Sbjct: 1011 LRGASDSYLDKLSGVLANMIYPVLLETIIKGDPRICSANIIWISPDTTAWIRNPSKNRKG 1070

Query: 789  XXXXXXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQA 610
                         KQ GD WRTV+DSCLPV HLIDTRRS+PY IKQ+QE++G+SCAF+QA
Sbjct: 1071 ELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQA 1130

Query: 609  VERLTTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLF 430
            V+RL+ S+ MVAKGVLKEHLIL+ANSMTC G+L+GFN+GGYKAL RSLNVQ+PFTEATLF
Sbjct: 1131 VQRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATLF 1190

Query: 429  TPRKCFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYN 253
             PRKCFEKAAEK H D+LSS VA+CS+GK VAVGTG+RF++LW  +    +Q + VD+Y+
Sbjct: 1191 MPRKCFEKAAEKRHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYD 1250

Query: 252  FLQIVRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHP-DGGKATFDDIAEFEPNS 76
            FL +VR+ T   E+ +GCLGEEVD +E   ++ D +LSPEH     K  F+D+ E +   
Sbjct: 1251 FLHMVRSSTGIEELDTGCLGEEVDGLE---DEFDWSLSPEHNLCSDKPIFEDLVEDQSWL 1307

Query: 75   KPSQISEGNWGNNS 34
            +  Q +E NW + +
Sbjct: 1308 ENKQENE-NWDSEA 1320


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score = 1620 bits (4195), Expect = 0.0
 Identities = 823/1335 (61%), Positives = 1033/1335 (77%), Gaps = 10/1335 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEEN SS ++ EG++  I+F LA+ +EICT+SISDC ISH SQL NPFLGLPLE GKCES
Sbjct: 1    MEENTSSTIL-EGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCES 59

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMK--KGQIRKNGEKDK 3655
            CGT+EPG+C+GHFGYI+LPIP+YHPSH+ ELK +LS++CLKCL+MK  K QI+ +G   +
Sbjct: 60   CGTSEPGKCEGHFGYIELPIPIYHPSHISELKHMLSLLCLKCLKMKSTKFQIKNDGVAQR 119

Query: 3654 S-SACTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRT 3481
              S+C  C +   +++ +    DG+F LELK+P K +L    WNFLERYGF YG    RT
Sbjct: 120  LLSSC--CEEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSLTRT 177

Query: 3480 LLPCEVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDV 3301
            LL  EV E+LKRI  ET+KKLA KGYFPQDGYIL+ LPVPPNCLSVPDISDG + MSSD+
Sbjct: 178  LLASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDL 237

Query: 3300 SVSMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFG 3121
            S++MLKKVLKQ EII+SSRSG PNFES EVE+N+LQ A+ QYL VRG+ K  R + ++FG
Sbjct: 238  SIAMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFG 297

Query: 3120 VNNESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEK 2941
            V+ + + T+ KAW+EKM+TLFI KGSGFSSRSVITGDAYKRV+EIG+P EIAQ+ITFEE+
Sbjct: 298  VSQDPNSTT-KAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEER 356

Query: 2940 VTVHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINR 2761
            V VHN+N+LQELVD KLCLTY DG S YSL+EGSKGHT L+ GQVVHRRIMDGD VFINR
Sbjct: 357  VNVHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINR 416

Query: 2760 PPSTHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFS 2581
            PP+THKHSLQA SVY+HD+HTVKINPLIC PL ADFDGDCIHLFYPQSLAAKAEVLELFS
Sbjct: 417  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFS 476

Query: 2580 VEQQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKA-C 2404
            VE+QLLSSH+G LNLQLA DALLSLK+MFKKYFL KA  QQLAM+  S L  PAL KA C
Sbjct: 477  VEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFTQQLAMFALSPLPRPALSKARC 536

Query: 2403 GPVPQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKG 2224
                +WTALQILQ+ LP  FD  G+RY+I++SE++K D++RD + S+ N+I+ ++F +KG
Sbjct: 537  S--ARWTALQILQSVLPPGFDSCGDRYLIKKSEVLKGDFDRDTIPSVINEIVTSIFFEKG 594

Query: 2223 SQDALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYN 2044
             ++ L+ F+SLQPLLMEN+F++G+SVSLEDF + K+    +QK +Q +  LLYH  ST N
Sbjct: 595  PEEVLEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALWNIQKEIQALYSLLYHRMSTQN 654

Query: 2043 EVVELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRI 1864
            E+V+LQ+ENH+R VK+ V  FILKSSTLG LIDSKS+S+++KVV           DRG+ 
Sbjct: 655  ELVDLQIENHIRHVKMLVAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKF 714

Query: 1863 YTRTLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSS 1684
            Y++TLVED+ + F++ + +  ++ P+  +GLI+ CFFHGL+PYE++  SIS+REV+VRSS
Sbjct: 715  YSKTLVEDIASHFERIYPMD-LNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSS 773

Query: 1683 RGLTEPGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVG 1504
            RGL+EPGTLFKNLMA+LRDVVICYDGTVRN CSNS+IQFDY V A  +  S  PAGEPVG
Sbjct: 774  RGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNA-RKSHSLFPAGEPVG 832

Query: 1503 VLAATAISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKK 1324
            VLAATA+SNPAYKAVLD       SWELMKEI+LC+V+  ND  D R ILYLNDC CG+K
Sbjct: 833  VLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRK 892

Query: 1323 YCKENAAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYV 1144
            YC+E AAY V+N LKR +LK  A  FL+EY+K +  I + D    LVGHIHL++  ++ +
Sbjct: 893  YCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPE--IISDDEG--LVGHIHLNKILLEDL 948

Query: 1143 GRNVHQILQRCQEKIGSI--KKKKDRLGRILRSLTLSVSECCYFSPPDAES-SQVPCLQF 973
              ++H IL +CQE + S   KKK  ++ +  ++ +LSVSECC F    A+  S +PCL F
Sbjct: 949  RISMHDILPKCQETLKSFCKKKKMKKVVQFFKNTSLSVSECCSFQQSCADKRSNMPCLMF 1008

Query: 972  SWQDTSSCTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQK 793
              +  S   L++ S ++AN I  +LLETI+KGDPR+  ANI+W++PDTT+W+R PSK +K
Sbjct: 1009 VLRGASDSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTAWIRNPSKNRK 1068

Query: 792  GXXXXXXXXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQ 613
            G             KQ GD WRTV+DSCLPV HLIDTRRS+PY IKQ+QE++G+SCAF+Q
Sbjct: 1069 GELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQ 1128

Query: 612  AVERLTTSIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATL 433
            AV+RL+ S+ MVAKGVLKEHLIL+ANSMTC G+L+GFN+GGYKAL RSLNVQ+PFTEATL
Sbjct: 1129 AVQRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATL 1188

Query: 432  FTPRKCFEKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIY 256
            FTPRKCFEKAAEKCH D+LSS VA+CS+GK VAVGTG+RF++LW  +    +Q + VD+Y
Sbjct: 1189 FTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVY 1248

Query: 255  NFLQIVRTGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHP-DGGKATFDDIAEFEPN 79
            +FL +VR+ T   E  +GCLGEEVD +E   ++ D +LSPEH     K  F+D+ E +  
Sbjct: 1249 DFLHMVRSSTGIEESDTGCLGEEVDGLE---DEFDWSLSPEHNLCSDKPVFEDLVEDQSW 1305

Query: 78   SKPSQISEGNWGNNS 34
             +  Q    NW + +
Sbjct: 1306 LENKQ-ENANWDSEA 1319


>ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
            [Gossypium raimondii]
          Length = 1921

 Score = 1618 bits (4191), Expect = 0.0
 Identities = 813/1329 (61%), Positives = 1024/1329 (77%), Gaps = 3/1329 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEEN SS+++ +G +  IKF LA+ +EI T+S+S  PI+H SQL+N +LGLPLE GKC +
Sbjct: 1    MEENSSSVIL-DGEIVGIKFCLATPKEILTASVSGFPINHVSQLSNSYLGLPLEFGKCSA 59

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQIRKNGEKDKSS 3649
            CGT+EPG+C+GHFGYI+LPIP+YHPSH+ ELKRLLS++CLKCL++K     K+G   +  
Sbjct: 60   CGTSEPGQCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKNKFQMKSGSVAERL 119

Query: 3648 ACTHCLDMPPITVRESNLKDGSFCLELKVPKSKLRESMWNFLERYGFIYGYEECRTLLPC 3469
              + C + P ++++E    DG+  LELK P S+  ++ WNFLERYGF YG    RTLLPC
Sbjct: 120  LSSCCENTPQVSIKEVKTTDGACYLELKQP-SRQSKTNWNFLERYGFRYGDHHTRTLLPC 178

Query: 3468 EVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSM 3289
            EV+EILKRI ++T++KL+ KG+FPQ+GYILQ LPVPPNCLSVPD+SDG ++MSSD+S SM
Sbjct: 179  EVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDLSTSM 238

Query: 3288 LKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNE 3109
            L+KVLKQ EIIKSSRSG PNFESHEVEAN+LQSA+ QYL VRG+ K  R I +++GVN +
Sbjct: 239  LRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVNKD 298

Query: 3108 SDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVH 2929
            + D+S KAW+EKM+TLFI KGSGFSSRSVITGD YK+V+EIG+PSEIAQ+ITFEE+V +H
Sbjct: 299  ASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVNMH 358

Query: 2928 NMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPST 2749
            NM +LQ LVD KLCLTYRDGGS YSL+EGSKGHT L+ GQVVHRRIMDGDIVFINRPP+T
Sbjct: 359  NMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTT 418

Query: 2748 HKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQ 2569
            HKHSLQA SVY+HD+HTVKINPLIC PL ADFDGDCIHLFYPQSL+AKAEV ELFSVE+Q
Sbjct: 419  HKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVEKQ 478

Query: 2568 LLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQ 2389
            LLSSHSG LNLQLA D+LLSL++M K +  KKA AQQL+M++SS L  PA LK     P 
Sbjct: 479  LLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHVAPC 538

Query: 2388 WTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDAL 2209
            WTA QILQ A PA  DCS +RY+I +S+I+K D+N+D++QS+ N+++ ++F +KG ++ L
Sbjct: 539  WTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKEVL 598

Query: 2208 KVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVEL 2029
              F+SLQPLLMENIF+EG++V LEDF + + +   +QK++Q ISPLLY LRSTYNE+VEL
Sbjct: 599  NFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELVEL 658

Query: 2028 QVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTL 1849
            Q+ENH+R  K P+ +FILK+S+LGNLIDS+S+S++NKVV           D+G+ Y++TL
Sbjct: 659  QMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSKTL 718

Query: 1848 VEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTE 1669
            VED+   FQ  +    ID PS  FGLI+SCFF GL+PYE +V SIS+REV+VRS+RGL+E
Sbjct: 719  VEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGLSE 778

Query: 1668 PGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVLAAT 1489
            PGTLFKNLMAILRDVVICYDGTVRN  SNS+IQF Y + A T  R   PAGEPVGVLAAT
Sbjct: 779  PGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSART--RPQFPAGEPVGVLAAT 836

Query: 1488 AISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYCKEN 1309
            A+SNPAYKAVLD       SWELMKEI+LCKV+ KND  D R ILYL DC CG+KYC+EN
Sbjct: 837  AMSNPAYKAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDCGRKYCQEN 896

Query: 1308 AAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGRNVH 1129
            AAY V+NHL+R  LK IA  F++EY++QQ   E     A LVGHI L++  +K +  +V 
Sbjct: 897  AAYLVKNHLRRVKLKDIAVDFIIEYQQQQIVSE---IEAGLVGHILLNKDLLKELSVSVQ 953

Query: 1128 QILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPPDAES-SQVPCLQFSWQDTSS 952
            +I  +CQE I S +KKK +     +   L VSE C       +    +PCL F +++T+ 
Sbjct: 954  EIHMKCQETINSFRKKK-KTAETFKRTDLFVSESCSIQQSCVDKWLDMPCLMFFFRNTND 1012

Query: 951  CTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXXXXXX 772
              L+   QI+A+ I  +LL+T++KGDPR+  A I+WVNPD T+W+R PSK QKG      
Sbjct: 1013 DNLDSAIQILADIIYPVLLQTVIKGDPRICSAKIIWVNPDATTWIRNPSKTQKGELALEV 1072

Query: 771  XXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVERLTT 592
                   KQ+GD WRTV+D CLPV+++IDT RSIPY IKQ+++++GISCAF+QAV+RL+T
Sbjct: 1073 VLEKSAVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISCAFEQAVQRLST 1132

Query: 591  SIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTPRKCF 412
            S+ MV +GVLKEHL+L+ANSMTC GNLIGFN+GGYK L RSLN+Q+PFTEATLFTPRKCF
Sbjct: 1133 SVSMVTRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFTEATLFTPRKCF 1192

Query: 411  EKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYNFLQIVR 235
            E+AAEKC+ DSLSS VASCS+GKRVAVGTG+RF++LWN +E G DQ + +D+YNFL +V 
Sbjct: 1193 ERAAEKCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWN-QESGSDQMSGMDVYNFLHMV- 1250

Query: 234  TGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHPDG-GKATFDDIAEFEPNSKPSQIS 58
            +G       + CLGEEVDD+  E       LSP+H  G  K  F+D AEFE N+   Q +
Sbjct: 1251 SGAGGSNSNTACLGEEVDDLMDE-----WCLSPDHSTGLDKPVFEDAAEFE-NNLDGQSA 1304

Query: 57   EGNWGNNSS 31
              NW  + S
Sbjct: 1305 SANWEKDVS 1313


>gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1883

 Score = 1618 bits (4191), Expect = 0.0
 Identities = 813/1329 (61%), Positives = 1024/1329 (77%), Gaps = 3/1329 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEEN SS+++ +G +  IKF LA+ +EI T+S+S  PI+H SQL+N +LGLPLE GKC +
Sbjct: 1    MEENSSSVIL-DGEIVGIKFCLATPKEILTASVSGFPINHVSQLSNSYLGLPLEFGKCSA 59

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQIRKNGEKDKSS 3649
            CGT+EPG+C+GHFGYI+LPIP+YHPSH+ ELKRLLS++CLKCL++K     K+G   +  
Sbjct: 60   CGTSEPGQCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKNKFQMKSGSVAERL 119

Query: 3648 ACTHCLDMPPITVRESNLKDGSFCLELKVPKSKLRESMWNFLERYGFIYGYEECRTLLPC 3469
              + C + P ++++E    DG+  LELK P S+  ++ WNFLERYGF YG    RTLLPC
Sbjct: 120  LSSCCENTPQVSIKEVKTTDGACYLELKQP-SRQSKTNWNFLERYGFRYGDHHTRTLLPC 178

Query: 3468 EVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSM 3289
            EV+EILKRI ++T++KL+ KG+FPQ+GYILQ LPVPPNCLSVPD+SDG ++MSSD+S SM
Sbjct: 179  EVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDLSTSM 238

Query: 3288 LKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNE 3109
            L+KVLKQ EIIKSSRSG PNFESHEVEAN+LQSA+ QYL VRG+ K  R I +++GVN +
Sbjct: 239  LRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVNKD 298

Query: 3108 SDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVH 2929
            + D+S KAW+EKM+TLFI KGSGFSSRSVITGD YK+V+EIG+PSEIAQ+ITFEE+V +H
Sbjct: 299  ASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVNMH 358

Query: 2928 NMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPST 2749
            NM +LQ LVD KLCLTYRDGGS YSL+EGSKGHT L+ GQVVHRRIMDGDIVFINRPP+T
Sbjct: 359  NMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTT 418

Query: 2748 HKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQ 2569
            HKHSLQA SVY+HD+HTVKINPLIC PL ADFDGDCIHLFYPQSL+AKAEV ELFSVE+Q
Sbjct: 419  HKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVEKQ 478

Query: 2568 LLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQ 2389
            LLSSHSG LNLQLA D+LLSL++M K +  KKA AQQL+M++SS L  PA LK     P 
Sbjct: 479  LLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHVAPC 538

Query: 2388 WTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDAL 2209
            WTA QILQ A PA  DCS +RY+I +S+I+K D+N+D++QS+ N+++ ++F +KG ++ L
Sbjct: 539  WTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKEVL 598

Query: 2208 KVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVEL 2029
              F+SLQPLLMENIF+EG++V LEDF + + +   +QK++Q ISPLLY LRSTYNE+VEL
Sbjct: 599  NFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELVEL 658

Query: 2028 QVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTL 1849
            Q+ENH+R  K P+ +FILK+S+LGNLIDS+S+S++NKVV           D+G+ Y++TL
Sbjct: 659  QMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSKTL 718

Query: 1848 VEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTE 1669
            VED+   FQ  +    ID PS  FGLI+SCFF GL+PYE +V SIS+REV+VRS+RGL+E
Sbjct: 719  VEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGLSE 778

Query: 1668 PGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVLAAT 1489
            PGTLFKNLMAILRDVVICYDGTVRN  SNS+IQF Y + A T  R   PAGEPVGVLAAT
Sbjct: 779  PGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSART--RPQFPAGEPVGVLAAT 836

Query: 1488 AISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYCKEN 1309
            A+SNPAYKAVLD       SWELMKEI+LCKV+ KND  D R ILYL DC CG+KYC+EN
Sbjct: 837  AMSNPAYKAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDCGRKYCQEN 896

Query: 1308 AAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGRNVH 1129
            AAY V+NHL+R  LK IA  F++EY++QQ   E     A LVGHI L++  +K +  +V 
Sbjct: 897  AAYLVKNHLRRVKLKDIAVDFIIEYQQQQIVSE---IEAGLVGHILLNKDLLKELSVSVQ 953

Query: 1128 QILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPPDAES-SQVPCLQFSWQDTSS 952
            +I  +CQE I S +KKK +     +   L VSE C       +    +PCL F +++T+ 
Sbjct: 954  EIHMKCQETINSFRKKK-KTAETFKRTDLFVSESCSIQQSCVDKWLDMPCLMFFFRNTND 1012

Query: 951  CTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXXXXXX 772
              L+   QI+A+ I  +LL+T++KGDPR+  A I+WVNPD T+W+R PSK QKG      
Sbjct: 1013 DNLDSAIQILADIIYPVLLQTVIKGDPRICSAKIIWVNPDATTWIRNPSKTQKGELALEV 1072

Query: 771  XXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVERLTT 592
                   KQ+GD WRTV+D CLPV+++IDT RSIPY IKQ+++++GISCAF+QAV+RL+T
Sbjct: 1073 VLEKSAVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISCAFEQAVQRLST 1132

Query: 591  SIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTPRKCF 412
            S+ MV +GVLKEHL+L+ANSMTC GNLIGFN+GGYK L RSLN+Q+PFTEATLFTPRKCF
Sbjct: 1133 SVSMVTRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFTEATLFTPRKCF 1192

Query: 411  EKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYNFLQIVR 235
            E+AAEKC+ DSLSS VASCS+GKRVAVGTG+RF++LWN +E G DQ + +D+YNFL +V 
Sbjct: 1193 ERAAEKCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWN-QESGSDQMSGMDVYNFLHMV- 1250

Query: 234  TGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHPDG-GKATFDDIAEFEPNSKPSQIS 58
            +G       + CLGEEVDD+  E       LSP+H  G  K  F+D AEFE N+   Q +
Sbjct: 1251 SGAGGSNSNTACLGEEVDDLMDE-----WCLSPDHSTGLDKPVFEDAAEFE-NNLDGQSA 1304

Query: 57   EGNWGNNSS 31
              NW  + S
Sbjct: 1305 SANWEKDVS 1313


>gb|KJB67888.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1406

 Score = 1618 bits (4191), Expect = 0.0
 Identities = 813/1329 (61%), Positives = 1024/1329 (77%), Gaps = 3/1329 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEEN SS+++ +G +  IKF LA+ +EI T+S+S  PI+H SQL+N +LGLPLE GKC +
Sbjct: 1    MEENSSSVIL-DGEIVGIKFCLATPKEILTASVSGFPINHVSQLSNSYLGLPLEFGKCSA 59

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQIRKNGEKDKSS 3649
            CGT+EPG+C+GHFGYI+LPIP+YHPSH+ ELKRLLS++CLKCL++K     K+G   +  
Sbjct: 60   CGTSEPGQCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKNKFQMKSGSVAERL 119

Query: 3648 ACTHCLDMPPITVRESNLKDGSFCLELKVPKSKLRESMWNFLERYGFIYGYEECRTLLPC 3469
              + C + P ++++E    DG+  LELK P S+  ++ WNFLERYGF YG    RTLLPC
Sbjct: 120  LSSCCENTPQVSIKEVKTTDGACYLELKQP-SRQSKTNWNFLERYGFRYGDHHTRTLLPC 178

Query: 3468 EVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSM 3289
            EV+EILKRI ++T++KL+ KG+FPQ+GYILQ LPVPPNCLSVPD+SDG ++MSSD+S SM
Sbjct: 179  EVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDLSTSM 238

Query: 3288 LKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNE 3109
            L+KVLKQ EIIKSSRSG PNFESHEVEAN+LQSA+ QYL VRG+ K  R I +++GVN +
Sbjct: 239  LRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVNKD 298

Query: 3108 SDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVH 2929
            + D+S KAW+EKM+TLFI KGSGFSSRSVITGD YK+V+EIG+PSEIAQ+ITFEE+V +H
Sbjct: 299  ASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVNMH 358

Query: 2928 NMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPST 2749
            NM +LQ LVD KLCLTYRDGGS YSL+EGSKGHT L+ GQVVHRRIMDGDIVFINRPP+T
Sbjct: 359  NMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTT 418

Query: 2748 HKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQ 2569
            HKHSLQA SVY+HD+HTVKINPLIC PL ADFDGDCIHLFYPQSL+AKAEV ELFSVE+Q
Sbjct: 419  HKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVEKQ 478

Query: 2568 LLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQ 2389
            LLSSHSG LNLQLA D+LLSL++M K +  KKA AQQL+M++SS L  PA LK     P 
Sbjct: 479  LLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHVAPC 538

Query: 2388 WTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDAL 2209
            WTA QILQ A PA  DCS +RY+I +S+I+K D+N+D++QS+ N+++ ++F +KG ++ L
Sbjct: 539  WTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKEVL 598

Query: 2208 KVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVEL 2029
              F+SLQPLLMENIF+EG++V LEDF + + +   +QK++Q ISPLLY LRSTYNE+VEL
Sbjct: 599  NFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELVEL 658

Query: 2028 QVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTL 1849
            Q+ENH+R  K P+ +FILK+S+LGNLIDS+S+S++NKVV           D+G+ Y++TL
Sbjct: 659  QMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSKTL 718

Query: 1848 VEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTE 1669
            VED+   FQ  +    ID PS  FGLI+SCFF GL+PYE +V SIS+REV+VRS+RGL+E
Sbjct: 719  VEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGLSE 778

Query: 1668 PGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVLAAT 1489
            PGTLFKNLMAILRDVVICYDGTVRN  SNS+IQF Y + A T  R   PAGEPVGVLAAT
Sbjct: 779  PGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSART--RPQFPAGEPVGVLAAT 836

Query: 1488 AISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYCKEN 1309
            A+SNPAYKAVLD       SWELMKEI+LCKV+ KND  D R ILYL DC CG+KYC+EN
Sbjct: 837  AMSNPAYKAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDCGRKYCQEN 896

Query: 1308 AAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGRNVH 1129
            AAY V+NHL+R  LK IA  F++EY++QQ   E     A LVGHI L++  +K +  +V 
Sbjct: 897  AAYLVKNHLRRVKLKDIAVDFIIEYQQQQIVSE---IEAGLVGHILLNKDLLKELSVSVQ 953

Query: 1128 QILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPPDAES-SQVPCLQFSWQDTSS 952
            +I  +CQE I S +KKK +     +   L VSE C       +    +PCL F +++T+ 
Sbjct: 954  EIHMKCQETINSFRKKK-KTAETFKRTDLFVSESCSIQQSCVDKWLDMPCLMFFFRNTND 1012

Query: 951  CTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXXXXXX 772
              L+   QI+A+ I  +LL+T++KGDPR+  A I+WVNPD T+W+R PSK QKG      
Sbjct: 1013 DNLDSAIQILADIIYPVLLQTVIKGDPRICSAKIIWVNPDATTWIRNPSKTQKGELALEV 1072

Query: 771  XXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVERLTT 592
                   KQ+GD WRTV+D CLPV+++IDT RSIPY IKQ+++++GISCAF+QAV+RL+T
Sbjct: 1073 VLEKSAVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISCAFEQAVQRLST 1132

Query: 591  SIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTPRKCF 412
            S+ MV +GVLKEHL+L+ANSMTC GNLIGFN+GGYK L RSLN+Q+PFTEATLFTPRKCF
Sbjct: 1133 SVSMVTRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFTEATLFTPRKCF 1192

Query: 411  EKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYNFLQIVR 235
            E+AAEKC+ DSLSS VASCS+GKRVAVGTG+RF++LWN +E G DQ + +D+YNFL +V 
Sbjct: 1193 ERAAEKCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWN-QESGSDQMSGMDVYNFLHMV- 1250

Query: 234  TGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHPDG-GKATFDDIAEFEPNSKPSQIS 58
            +G       + CLGEEVDD+  E       LSP+H  G  K  F+D AEFE N+   Q +
Sbjct: 1251 SGAGGSNSNTACLGEEVDDLMDE-----WCLSPDHSTGLDKPVFEDAAEFE-NNLDGQSA 1304

Query: 57   EGNWGNNSS 31
              NW  + S
Sbjct: 1305 SANWEKDVS 1313


>ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
            [Gossypium raimondii] gi|763800932|gb|KJB67887.1|
            hypothetical protein B456_010G216600 [Gossypium
            raimondii]
          Length = 1966

 Score = 1618 bits (4191), Expect = 0.0
 Identities = 813/1329 (61%), Positives = 1024/1329 (77%), Gaps = 3/1329 (0%)
 Frame = -3

Query: 4008 MEENRSSLLIAEGRLTSIKFSLASHQEICTSSISDCPISHPSQLTNPFLGLPLETGKCES 3829
            MEEN SS+++ +G +  IKF LA+ +EI T+S+S  PI+H SQL+N +LGLPLE GKC +
Sbjct: 1    MEENSSSVIL-DGEIVGIKFCLATPKEILTASVSGFPINHVSQLSNSYLGLPLEFGKCSA 59

Query: 3828 CGTAEPGECDGHFGYIQLPIPVYHPSHLGELKRLLSIICLKCLRMKKGQIRKNGEKDKSS 3649
            CGT+EPG+C+GHFGYI+LPIP+YHPSH+ ELKRLLS++CLKCL++K     K+G   +  
Sbjct: 60   CGTSEPGQCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKNKFQMKSGSVAERL 119

Query: 3648 ACTHCLDMPPITVRESNLKDGSFCLELKVPKSKLRESMWNFLERYGFIYGYEECRTLLPC 3469
              + C + P ++++E    DG+  LELK P S+  ++ WNFLERYGF YG    RTLLPC
Sbjct: 120  LSSCCENTPQVSIKEVKTTDGACYLELKQP-SRQSKTNWNFLERYGFRYGDHHTRTLLPC 178

Query: 3468 EVLEILKRISAETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSM 3289
            EV+EILKRI ++T++KL+ KG+FPQ+GYILQ LPVPPNCLSVPD+SDG ++MSSD+S SM
Sbjct: 179  EVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDLSTSM 238

Query: 3288 LKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNE 3109
            L+KVLKQ EIIKSSRSG PNFESHEVEAN+LQSA+ QYL VRG+ K  R I +++GVN +
Sbjct: 239  LRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVNKD 298

Query: 3108 SDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVH 2929
            + D+S KAW+EKM+TLFI KGSGFSSRSVITGD YK+V+EIG+PSEIAQ+ITFEE+V +H
Sbjct: 299  ASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVNMH 358

Query: 2928 NMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPST 2749
            NM +LQ LVD KLCLTYRDGGS YSL+EGSKGHT L+ GQVVHRRIMDGDIVFINRPP+T
Sbjct: 359  NMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTT 418

Query: 2748 HKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQ 2569
            HKHSLQA SVY+HD+HTVKINPLIC PL ADFDGDCIHLFYPQSL+AKAEV ELFSVE+Q
Sbjct: 419  HKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVEKQ 478

Query: 2568 LLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQ 2389
            LLSSHSG LNLQLA D+LLSL++M K +  KKA AQQL+M++SS L  PA LK     P 
Sbjct: 479  LLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHVAPC 538

Query: 2388 WTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDAL 2209
            WTA QILQ A PA  DCS +RY+I +S+I+K D+N+D++QS+ N+++ ++F +KG ++ L
Sbjct: 539  WTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKEVL 598

Query: 2208 KVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVEL 2029
              F+SLQPLLMENIF+EG++V LEDF + + +   +QK++Q ISPLLY LRSTYNE+VEL
Sbjct: 599  NFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELVEL 658

Query: 2028 QVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTL 1849
            Q+ENH+R  K P+ +FILK+S+LGNLIDS+S+S++NKVV           D+G+ Y++TL
Sbjct: 659  QMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSKTL 718

Query: 1848 VEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTE 1669
            VED+   FQ  +    ID PS  FGLI+SCFF GL+PYE +V SIS+REV+VRS+RGL+E
Sbjct: 719  VEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGLSE 778

Query: 1668 PGTLFKNLMAILRDVVICYDGTVRNACSNSVIQFDYIVEAGTEDRSFSPAGEPVGVLAAT 1489
            PGTLFKNLMAILRDVVICYDGTVRN  SNS+IQF Y + A T  R   PAGEPVGVLAAT
Sbjct: 779  PGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSART--RPQFPAGEPVGVLAAT 836

Query: 1488 AISNPAYKAVLDXXXXXXXSWELMKEIVLCKVNMKNDLNDHRAILYLNDCSCGKKYCKEN 1309
            A+SNPAYKAVLD       SWELMKEI+LCKV+ KND  D R ILYL DC CG+KYC+EN
Sbjct: 837  AMSNPAYKAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDCGRKYCQEN 896

Query: 1308 AAYSVQNHLKRRNLKAIANSFLVEYRKQQGSIENPDTNACLVGHIHLDEAEMKYVGRNVH 1129
            AAY V+NHL+R  LK IA  F++EY++QQ   E     A LVGHI L++  +K +  +V 
Sbjct: 897  AAYLVKNHLRRVKLKDIAVDFIIEYQQQQIVSE---IEAGLVGHILLNKDLLKELSVSVQ 953

Query: 1128 QILQRCQEKIGSIKKKKDRLGRILRSLTLSVSECCYFSPPDAES-SQVPCLQFSWQDTSS 952
            +I  +CQE I S +KKK +     +   L VSE C       +    +PCL F +++T+ 
Sbjct: 954  EIHMKCQETINSFRKKK-KTAETFKRTDLFVSESCSIQQSCVDKWLDMPCLMFFFRNTND 1012

Query: 951  CTLEQTSQIMANSICSILLETIVKGDPRVNMANIVWVNPDTTSWVRRPSKIQKGXXXXXX 772
              L+   QI+A+ I  +LL+T++KGDPR+  A I+WVNPD T+W+R PSK QKG      
Sbjct: 1013 DNLDSAIQILADIIYPVLLQTVIKGDPRICSAKIIWVNPDATTWIRNPSKTQKGELALEV 1072

Query: 771  XXXXXXXKQHGDTWRTVMDSCLPVIHLIDTRRSIPYGIKQLQEMIGISCAFDQAVERLTT 592
                   KQ+GD WRTV+D CLPV+++IDT RSIPY IKQ+++++GISCAF+QAV+RL+T
Sbjct: 1073 VLEKSAVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISCAFEQAVQRLST 1132

Query: 591  SIRMVAKGVLKEHLILVANSMTCTGNLIGFNTGGYKALFRSLNVQIPFTEATLFTPRKCF 412
            S+ MV +GVLKEHL+L+ANSMTC GNLIGFN+GGYK L RSLN+Q+PFTEATLFTPRKCF
Sbjct: 1133 SVSMVTRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFTEATLFTPRKCF 1192

Query: 411  EKAAEKCHLDSLSSTVASCSFGKRVAVGTGARFEILWNKKEMGLDQ-NAVDIYNFLQIVR 235
            E+AAEKC+ DSLSS VASCS+GKRVAVGTG+RF++LWN +E G DQ + +D+YNFL +V 
Sbjct: 1193 ERAAEKCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWN-QESGSDQMSGMDVYNFLHMV- 1250

Query: 234  TGTNEGEVISGCLGEEVDDMELEIEDADLALSPEHPDG-GKATFDDIAEFEPNSKPSQIS 58
            +G       + CLGEEVDD+  E       LSP+H  G  K  F+D AEFE N+   Q +
Sbjct: 1251 SGAGGSNSNTACLGEEVDDLMDE-----WCLSPDHSTGLDKPVFEDAAEFE-NNLDGQSA 1304

Query: 57   EGNWGNNSS 31
              NW  + S
Sbjct: 1305 SANWEKDVS 1313