BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00007822
         (2090 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1176   0.0  
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1172   0.0  
emb|CBI27412.3| unnamed protein product [Vitis vinifera]             1146   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1146   0.0  
ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1139   0.0  
ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1139   0.0  
ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1137   0.0  
ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1127   0.0  
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g...  1125   0.0  
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo...  1125   0.0  
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...  1125   0.0  
ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1121   0.0  
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1121   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1120   0.0  
ref|XP_012438460.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1117   0.0  
ref|XP_012088095.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1115   0.0  
ref|XP_012088094.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1115   0.0  
gb|KDP24319.1| hypothetical protein JCGZ_25615 [Jatropha curcas]     1115   0.0  
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob...  1112   0.0  
ref|XP_012835044.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1109   0.0  

>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1176 bits (3041), Expect = 0.0
 Identities = 567/696 (81%), Positives = 634/696 (91%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQD 1911
            EVRI+ FLEKT+KK  +D + +GGE D   KEQ +LR KVT+LMKKQKL+QVR IVKGQD
Sbjct: 313  EVRIHKFLEKTRKKTDKDKKADGGESDPVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQD 372

Query: 1910 DVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKIS 1731
            D KPWGQDAQAKVGSRLIELL+Q+AYIQPPVDQLADGPPDIRPAF+H+L+TV K+ QK S
Sbjct: 373  DSKPWGQDAQAKVGSRLIELLMQTAYIQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTS 432

Query: 1730 RRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQ 1551
            RRYG+IECDPLVR+G+ERTARHMVIPYMPML+PP  W GYDKGAYLFLPSYVMRTHGA+Q
Sbjct: 433  RRYGVIECDPLVRKGLERTARHMVIPYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQ 492

Query: 1550 QREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLP 1371
            QREAVK+ P+KQ+ PVFEAL TLG+ KWRVNKR+L VVDR+WASGG+ A LV+R+DVP+P
Sbjct: 493  QREAVKRAPRKQLEPVFEALDTLGNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIP 552

Query: 1370 EEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDFR 1191
            EEP  EDEAE++ W+W      KENS+RHS RCD+ELKLAVAR+MK EDGF+YPHNLDFR
Sbjct: 553  EEPDTEDEAEIKKWKWKVKAAKKENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFR 612

Query: 1190 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRI 1011
            GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL+WLKIHLANL+ AGGVDKLSYEGRI
Sbjct: 613  GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLY-AGGVDKLSYEGRI 671

Query: 1010 AFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQ 831
            AFTE++LD+IFDSADRPLEG +WWL AEDPFQCLA C+NLSEALRSSSPETTISH+PVHQ
Sbjct: 672  AFTENHLDDIFDSADRPLEGRRWWLNAEDPFQCLAACINLSEALRSSSPETTISHMPVHQ 731

Query: 830  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNV 651
            DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RV +IM+ DA+KDP    N 
Sbjct: 732  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPETHPNA 791

Query: 650  LRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYA 471
            + A++LI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKER+   +++E FG +CYA
Sbjct: 792  MHARILI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNVIADDSELFGASCYA 849

Query: 470  AKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIKT 291
            AK TLTALGEMFEAARSIMSWLGDCAK+IA +N PVRWTTPLGLPVVQPYRKLGRHLIKT
Sbjct: 850  AKTTLTALGEMFEAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKT 909

Query: 290  SLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTH 111
            SLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTH
Sbjct: 910  SLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTH 969

Query: 110  ACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            ACD+DEMN+ILREKFVELYE+PILENLL SFQ+SFP
Sbjct: 970  ACDIDEMNKILREKFVELYEKPILENLLESFQQSFP 1005


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score = 1172 bits (3031), Expect = 0.0
 Identities = 565/696 (81%), Positives = 630/696 (90%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQD 1911
            EVRIY FLEKTKKK  +D + EGGE D A KEQ +LR KVT+LMKKQKL+QVR IVK QD
Sbjct: 272  EVRIYKFLEKTKKKTDKDKKAEGGESDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQD 331

Query: 1910 DVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKIS 1731
            D KPWGQDAQAKVGS LIELL+Q+AYIQ P DQLADGPPDIRPAF+HTL+T+ K+ QK S
Sbjct: 332  DSKPWGQDAQAKVGSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTS 391

Query: 1730 RRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQ 1551
            RRYG+IECDPLVR+G+ERTARHMVIPYMPML+PP  W GYDKGAYLFLPSYVMRTHGA+Q
Sbjct: 392  RRYGLIECDPLVRKGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQ 451

Query: 1550 QREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLP 1371
            QREAVK+T +KQ+ P+FEAL TLG+ KWR+NKR+LGVVDR+WASGG+ A LV+R+DVPLP
Sbjct: 452  QREAVKRTSRKQLEPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLP 511

Query: 1370 EEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDFR 1191
            EEP  EDEAEL+ W+W      KENS+RHS RCD ELKLAVAR+MK E+GF+YPHNLDFR
Sbjct: 512  EEPETEDEAELKKWKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFR 571

Query: 1190 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRI 1011
            GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSYEGRI
Sbjct: 572  GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYEGRI 630

Query: 1010 AFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQ 831
            AFTE++LD+IFDSADRPLEG +WWL A+DPFQCLAVC+NLSEALRS SPET ISHIP+HQ
Sbjct: 631  AFTENHLDDIFDSADRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQ 690

Query: 830  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNV 651
            DGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSG+A RV +IM+ DAQKDP  + N 
Sbjct: 691  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNA 750

Query: 650  LRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYA 471
            + A+LLI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKER+   +E+E FG +CYA
Sbjct: 751  MHARLLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYA 808

Query: 470  AKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIKT 291
            AK T+TALGEMF+AARSIMSWLGDCAK+IA +N PVRWTTPLGLPVVQPYRKLGRHLIKT
Sbjct: 809  AKTTITALGEMFKAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKT 868

Query: 290  SLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTH 111
            SLQVLTLQRETDKVMVKRQ+TAFPPNF+HSLDGSHMMMTA+ACKRAGLNFAGVHDS+WTH
Sbjct: 869  SLQVLTLQRETDKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACKRAGLNFAGVHDSFWTH 928

Query: 110  ACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            ACDVDEMN+ILREKFVELYE PI+ENLL SFQ+SFP
Sbjct: 929  ACDVDEMNKILREKFVELYETPIMENLLESFQQSFP 964


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score = 1146 bits (2964), Expect = 0.0
 Identities = 558/696 (80%), Positives = 619/696 (88%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQD 1911
            EVRI  F+EKTKKK++     +GG   +  KEQ KLR KV+ LMKKQKL+QVR IVK QD
Sbjct: 93   EVRIQRFMEKTKKKSASSNNPDGGSNPVT-KEQEKLRKKVSMLMKKQKLQQVRQIVKRQD 151

Query: 1910 DVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKIS 1731
            D KPWGQDA  KVGSRLIELL+++AYIQPP DQL DGPPDIRPAF HTL+TV K+ QK +
Sbjct: 152  DSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGT 211

Query: 1730 RRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQ 1551
            RRYG+IECDPLVR+G+E+TARHMVIPYMPML+PP  W GYDKGAYLFLPSYVMR HGA+Q
Sbjct: 212  RRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQ 271

Query: 1550 QREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLP 1371
            QREA+K+ P+K + P FEAL TLG+ KWR+NKR+LGV+DR+WASGG+ A LV+R+DVPLP
Sbjct: 272  QREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLP 331

Query: 1370 EEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDFR 1191
            EEP  EDEAE+R W+W      KENS+RHS RCD+ELKLAVARKMK EDGF+YPHNLDFR
Sbjct: 332  EEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFR 391

Query: 1190 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRI 1011
            GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLAN++ AGGVDKLSYEGR+
Sbjct: 392  GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVY-AGGVDKLSYEGRV 450

Query: 1010 AFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQ 831
            AFTE++L++IFDSADRPLEG +WWL AEDPFQCLA C+NLSEALRSSSPETTISH+PVHQ
Sbjct: 451  AFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQ 510

Query: 830  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNV 651
            DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RV +IMQ DAQKDPA + N 
Sbjct: 511  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNA 570

Query: 650  LRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYA 471
            LRA+LLI +  V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKER    +E E F  +CYA
Sbjct: 571  LRARLLISQ--VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYA 628

Query: 470  AKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIKT 291
            AK TLTALGEMFEAARSIMSWLGDCAKVIA +NHPVRW TPLGLPVVQPYRKLGRHLIKT
Sbjct: 629  AKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKT 688

Query: 290  SLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTH 111
            SLQVL+LQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTH
Sbjct: 689  SLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTH 748

Query: 110  ACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            ACDVDEMNRILREKFVELY  PILENLL  FQ+SFP
Sbjct: 749  ACDVDEMNRILREKFVELYGMPILENLLEGFQKSFP 784


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1146 bits (2964), Expect = 0.0
 Identities = 558/696 (80%), Positives = 619/696 (88%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQD 1911
            EVRI  F+EKTKKK++     +GG   +  KEQ KLR KV+ LMKKQKL+QVR IVK QD
Sbjct: 261  EVRIQRFMEKTKKKSASSNNPDGGSNPVT-KEQEKLRKKVSMLMKKQKLQQVRQIVKRQD 319

Query: 1910 DVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKIS 1731
            D KPWGQDA  KVGSRLIELL+++AYIQPP DQL DGPPDIRPAF HTL+TV K+ QK +
Sbjct: 320  DSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGT 379

Query: 1730 RRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQ 1551
            RRYG+IECDPLVR+G+E+TARHMVIPYMPML+PP  W GYDKGAYLFLPSYVMR HGA+Q
Sbjct: 380  RRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQ 439

Query: 1550 QREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLP 1371
            QREA+K+ P+K + P FEAL TLG+ KWR+NKR+LGV+DR+WASGG+ A LV+R+DVPLP
Sbjct: 440  QREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLP 499

Query: 1370 EEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDFR 1191
            EEP  EDEAE+R W+W      KENS+RHS RCD+ELKLAVARKMK EDGF+YPHNLDFR
Sbjct: 500  EEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFR 559

Query: 1190 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRI 1011
            GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLAN++ AGGVDKLSYEGR+
Sbjct: 560  GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVY-AGGVDKLSYEGRV 618

Query: 1010 AFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQ 831
            AFTE++L++IFDSADRPLEG +WWL AEDPFQCLA C+NLSEALRSSSPETTISH+PVHQ
Sbjct: 619  AFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQ 678

Query: 830  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNV 651
            DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RV +IMQ DAQKDPA + N 
Sbjct: 679  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNA 738

Query: 650  LRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYA 471
            LRA+LLI +  V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKER    +E E F  +CYA
Sbjct: 739  LRARLLISQ--VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYA 796

Query: 470  AKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIKT 291
            AK TLTALGEMFEAARSIMSWLGDCAKVIA +NHPVRW TPLGLPVVQPYRKLGRHLIKT
Sbjct: 797  AKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKT 856

Query: 290  SLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTH 111
            SLQVL+LQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTH
Sbjct: 857  SLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTH 916

Query: 110  ACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            ACDVDEMNRILREKFVELY  PILENLL  FQ+SFP
Sbjct: 917  ACDVDEMNRILREKFVELYGMPILENLLEGFQKSFP 952


>ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Elaeis guineensis]
          Length = 1038

 Score = 1139 bits (2946), Expect = 0.0
 Identities = 555/696 (79%), Positives = 617/696 (88%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQD 1911
            EVRI+ FLEKT+KKA +D + E  E    AKEQ  LR KVTNLMKKQKL+QVR IV+GQD
Sbjct: 320  EVRIHRFLEKTRKKADKDKKNEDVEGATLAKEQEFLRKKVTNLMKKQKLRQVRKIVRGQD 379

Query: 1910 DVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKIS 1731
            D KPWGQD QAKVGSRLIELL+++AYIQPPV Q ADGPPDIRPAF+H+LRTV K+ QK S
Sbjct: 380  DSKPWGQDFQAKVGSRLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKHS 439

Query: 1730 RRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQ 1551
            RRYG+IECDPLVRQG++RTARHMVIPYMPML+PP  W GYDKG +LFLPSY+MR HGA+Q
Sbjct: 440  RRYGVIECDPLVRQGLDRTARHMVIPYMPMLVPPVHWTGYDKGGHLFLPSYIMRIHGARQ 499

Query: 1550 QREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLP 1371
            QREAVK+ P+ Q+  VFEAL TLG  KWR+NKR+L VVDR+W+ GG+ A LV+RDD+PLP
Sbjct: 500  QREAVKRAPRMQMQAVFEALDTLGTTKWRINKRVLSVVDRMWSGGGRLADLVDRDDIPLP 559

Query: 1370 EEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDFR 1191
            E+P  EDEA +R W+W      KENS+RHS RCD+ELKLAVARKMK E+GFYYPHNLDFR
Sbjct: 560  EKPDTEDEATIRKWKWKVKSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFR 619

Query: 1190 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRI 1011
            GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSY+GR+
Sbjct: 620  GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYDGRV 678

Query: 1010 AFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQ 831
            AFTE++LD IFDSADRPLEG +WWL AEDPFQCLAVC+NLSEALRSSSPETTISH+PVHQ
Sbjct: 679  AFTENHLDEIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQ 738

Query: 830  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNV 651
            DGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYS IA RV EIM+ DAQKDPA D N 
Sbjct: 739  DGSCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSEIAARVLEIMRRDAQKDPAIDPNA 798

Query: 650  LRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYA 471
            LRA+LL+  N V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKER    ++ E FG +CYA
Sbjct: 799  LRARLLV--NQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVISDDTELFGASCYA 856

Query: 470  AKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIKT 291
            AK TLTALGEMF+AARSIM WLGDCAK+IA +NHPVRWTTPLGLPVVQPYR LGRHLIKT
Sbjct: 857  AKTTLTALGEMFQAARSIMGWLGDCAKIIASENHPVRWTTPLGLPVVQPYRALGRHLIKT 916

Query: 290  SLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTH 111
            SLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTH
Sbjct: 917  SLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKIAGLNFAGVHDSYWTH 976

Query: 110  ACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            ACDVD++NRILREKFVELYE PILE+LL SFQ SFP
Sbjct: 977  ACDVDQLNRILREKFVELYETPILEDLLESFQHSFP 1012


>ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Phoenix dactylifera]
          Length = 1038

 Score = 1139 bits (2945), Expect = 0.0
 Identities = 554/696 (79%), Positives = 619/696 (88%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQD 1911
            EVRI+ FLEKT+KK  +D + E  E     KEQ  LR KVTNLMKKQK+ QVR IVKGQD
Sbjct: 320  EVRIHRFLEKTRKKTDKDKKNEDVEGATLTKEQEFLRKKVTNLMKKQKVHQVRKIVKGQD 379

Query: 1910 DVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKIS 1731
            D KPWGQDAQAKVGSRLIELL+++AYIQPPV Q ADGPPDIRPAF+H+LRTV K+ QK S
Sbjct: 380  DSKPWGQDAQAKVGSRLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKHS 439

Query: 1730 RRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQ 1551
            RRYG+IECDPLVRQG++RTARHMVIPYMPML+PP  W GY+KG +LFLPSY+MRTHGA+Q
Sbjct: 440  RRYGVIECDPLVRQGLDRTARHMVIPYMPMLVPPVNWTGYEKGGHLFLPSYIMRTHGARQ 499

Query: 1550 QREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLP 1371
            QREAV++ P+K++  VFEAL TLG  KWRVNKR+L VVDR+W+SGG+ A LV+RDD+PLP
Sbjct: 500  QREAVRRAPRKEMQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLVDRDDIPLP 559

Query: 1370 EEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDFR 1191
            E+P  ED AE+R W+W      KENS++HS RCD+ELKLAVARKMK E+GFYYPHNLDFR
Sbjct: 560  EKPDTEDGAEIRKWKWKVKSVKKENSEKHSQRCDVELKLAVARKMKDEEGFYYPHNLDFR 619

Query: 1190 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRI 1011
            GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSY+GR+
Sbjct: 620  GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYDGRV 678

Query: 1010 AFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQ 831
            AFTE++LD+IFDSADRPLEG +WWL AEDPFQCLAVC+NLSEALRSSSPETTISH+PVHQ
Sbjct: 679  AFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQ 738

Query: 830  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNV 651
            DGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYS IA RV EIM+ DAQKDPA D + 
Sbjct: 739  DGSCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSEIAARVLEIMRRDAQKDPATDPDA 798

Query: 650  LRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYA 471
            LRA+LL+  N V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKER    ++ E F  +CYA
Sbjct: 799  LRARLLV--NQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVISDDTELFSASCYA 856

Query: 470  AKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIKT 291
            AK TLTALGEMF+AARSIMSWLGDCAK+IA +N PVRWTTPLGLPVVQPYR LGRHLIKT
Sbjct: 857  AKTTLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRALGRHLIKT 916

Query: 290  SLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTH 111
            SLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACKRAGLNFAGVHDSYWTH
Sbjct: 917  SLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTH 976

Query: 110  ACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            ACDVD+MN ILREKFVELYE PILENLL SFQ+SFP
Sbjct: 977  ACDVDQMNWILREKFVELYETPILENLLESFQQSFP 1012


>ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Phoenix
            dactylifera]
          Length = 1036

 Score = 1137 bits (2941), Expect = 0.0
 Identities = 552/696 (79%), Positives = 626/696 (89%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQD 1911
            EV+I+ FLEK+K+K + + +    E D   KEQ  LR KVTNLMKKQKL+QVR IVKGQD
Sbjct: 318  EVKIHRFLEKSKQKTNINKKSGVAEVDNITKEQELLRKKVTNLMKKQKLQQVRKIVKGQD 377

Query: 1910 DVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKIS 1731
            D KPWGQD++AKVGSRLIELLV++AYIQPPV+QLAD PPDIRPAF+H LR V+ + +KIS
Sbjct: 378  DSKPWGQDSRAKVGSRLIELLVETAYIQPPVNQLADSPPDIRPAFRHLLRNVQNEQKKIS 437

Query: 1730 RRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQ 1551
            RRYG IECDPLVRQG++RTARHMVIPYMPML+PP  W GYDKGA+LFLPSY+MRTHG++Q
Sbjct: 438  RRYGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWKGYDKGAHLFLPSYLMRTHGSRQ 497

Query: 1550 QREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLP 1371
            QREAVK+ P+KQ+  VFEAL TLG+ KWRVNKR+L +VDR+W+SGG+ A LV+RDD+PLP
Sbjct: 498  QREAVKRAPRKQLQLVFEALDTLGNTKWRVNKRVLSIVDRMWSSGGRLANLVDRDDIPLP 557

Query: 1370 EEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDFR 1191
            E+P  ED AE+R W+W      KENS+RHS RCD+E+KLAVARKMK E+GFYYPHNLDFR
Sbjct: 558  EKPETEDGAEIRKWKWKLKSVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDFR 617

Query: 1190 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRI 1011
            GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSY+GRI
Sbjct: 618  GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYDGRI 676

Query: 1010 AFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQ 831
            AFTE++LD+IFDSADRPLEG +WWL AEDPFQCLAVC+NL+EALRSSSPE+TISHIPVHQ
Sbjct: 677  AFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQ 736

Query: 830  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNV 651
            DGSCNGLQHYAALGRDKLGA +VNLVAGEKPADVYSGIA RVREIMQ+DA+KDPA + N 
Sbjct: 737  DGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAEKDPATEPNA 796

Query: 650  LRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYA 471
            L A+LLI++  V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKER    ++ E F  +CYA
Sbjct: 797  LHARLLIDQ--VDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLELFRASCYA 854

Query: 470  AKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIKT 291
            AK TLTALGEMF+AARSIMSWLGDCAKVIA +NH VRWTTPLGLPVVQPYRKLGRH+IKT
Sbjct: 855  AKTTLTALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQPYRKLGRHIIKT 914

Query: 290  SLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTH 111
            SLQVL+LQRETDK+MVKRQ+TAFPPNFVHSLDGSHMMM+A+ACKRAGLNFAGVHDSYWTH
Sbjct: 915  SLQVLSLQRETDKIMVKRQRTAFPPNFVHSLDGSHMMMSAVACKRAGLNFAGVHDSYWTH 974

Query: 110  ACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            ACDVDEMNRILREKFVELYE PILENLL SFQ+SFP
Sbjct: 975  ACDVDEMNRILREKFVELYEIPILENLLESFQQSFP 1010


>ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Elaeis
            guineensis]
          Length = 1036

 Score = 1127 bits (2916), Expect = 0.0
 Identities = 550/696 (79%), Positives = 617/696 (88%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQD 1911
            EV+I+ FLEK+KKK + D +    E D   KEQ  LR +VTNLMKKQKL+QVR IVKGQD
Sbjct: 318  EVKIHRFLEKSKKKTNIDKKSGSAEVDNITKEQELLRKRVTNLMKKQKLQQVRKIVKGQD 377

Query: 1910 DVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKIS 1731
            D KPWGQD QAKVGSRLIELLV++AYIQPP++QLAD PPDIRPAF+H LR V+K+ +KIS
Sbjct: 378  DSKPWGQDTQAKVGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRNVQKEQKKIS 437

Query: 1730 RRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQ 1551
            RRYG IECDPLVRQG++RTARHMVIPYMPML+PP  W  YDKGA+LFLPSYVMRTHG++Q
Sbjct: 438  RRYGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFLPSYVMRTHGSRQ 497

Query: 1550 QREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLP 1371
            QR AVK+ P++Q+  VFEAL TLG+ KWRVNKR+L +VDR+W+SGG+ A LV+RDD PLP
Sbjct: 498  QRAAVKRAPREQMQLVFEALDTLGNTKWRVNKRVLNIVDRIWSSGGRLANLVDRDDNPLP 557

Query: 1370 EEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDFR 1191
            E+P  ED AE+R W+W      KENS+RHS RCD+E+KLAVARKMK E+GFYYPHNLDFR
Sbjct: 558  EKPETEDGAEIRKWKWKLKAVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDFR 617

Query: 1190 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRI 1011
            GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLKIHLANL+ AGGVDKLSY+GRI
Sbjct: 618  GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLY-AGGVDKLSYDGRI 676

Query: 1010 AFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQ 831
            AFTE++LD+IFDSADRPLEG +WWL AEDPFQCLAVC+NL+EALRSSSPE+TISHIPVHQ
Sbjct: 677  AFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQ 736

Query: 830  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNV 651
            DGSCNGLQHYAALGRDKLGA +VNLVAGEKPADVYSGIA RVREIMQ+DAQKDPA D N 
Sbjct: 737  DGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAQKDPAMDPNA 796

Query: 650  LRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYA 471
              A+LLI  N V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKER    ++ E F  +CYA
Sbjct: 797  SHARLLI--NQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLESFRASCYA 854

Query: 470  AKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIKT 291
            AK TLTALGEMF+AARSIM WLGDCAKVIA +N  VRWTTPLGLPVVQPYRKLGRH+IKT
Sbjct: 855  AKTTLTALGEMFQAARSIMCWLGDCAKVIASENQAVRWTTPLGLPVVQPYRKLGRHIIKT 914

Query: 290  SLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTH 111
            SLQVL+LQRETDK+MVKRQ+TAFPPNFVHSLDGSHMMMTA+ACKRAGLNFAGVHDSYWTH
Sbjct: 915  SLQVLSLQRETDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTH 974

Query: 110  ACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            ACDVDEMNRILR+KFVELYE PILENL  SFQ+SFP
Sbjct: 975  ACDVDEMNRILRDKFVELYEIPILENLRESFQQSFP 1010


>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
            gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
            Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
            single subunit RNA polymerase (mitochondrion) [Oryza
            sativa Japonica Group] gi|113630892|dbj|BAF24573.1|
            Os09g0246200 [Oryza sativa Japonica Group]
          Length = 1017

 Score = 1125 bits (2910), Expect = 0.0
 Identities = 547/698 (78%), Positives = 626/698 (89%), Gaps = 2/698 (0%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDM--EKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKG 1917
            EVRI+ FLEKTKKK++++M  E+EGG+ D+A KEQ +LR KVT+LMKKQK++QVR+IVK 
Sbjct: 298  EVRIHKFLEKTKKKSNKEMDNEEEGGDSDIA-KEQERLRKKVTDLMKKQKIRQVRNIVKK 356

Query: 1916 QDDVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQK 1737
            QD+ KPWGQDA AKVGSRLIEL++++AYIQPP  Q ADGPPDIRPAF H +RTV ++ QK
Sbjct: 357  QDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQK 416

Query: 1736 ISRRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGA 1557
             SRRYG+I+CDPLVRQG++RTA+HMVIPYMPMLIPP  W GYDKGA+LFLPSYVMRTHGA
Sbjct: 417  SSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGA 476

Query: 1556 KQQREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVP 1377
            +QQR+AV++ P++Q+  VFEAL TLG  KWRVNKR+L +VDR+W+SGG+ A LV+R DV 
Sbjct: 477  RQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVA 536

Query: 1376 LPEEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLD 1197
            LPE+P  EDE +L+ WRW      KENS+RHS RCD+ELKLAVARKMK EDGFYYPHNLD
Sbjct: 537  LPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLD 596

Query: 1196 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEG 1017
            FRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSY+G
Sbjct: 597  FRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYDG 655

Query: 1016 RIAFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPV 837
            RIAFTE++L++IFDSADRPLEG +WWL AEDPFQCLAVC+NL+EALRS SPET ISHIPV
Sbjct: 656  RIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPV 715

Query: 836  HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADS 657
            HQDGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RV EIM+ DA KDPA D 
Sbjct: 716  HQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDP 775

Query: 656  NVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLAC 477
            +  RA+LL+++  V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKERD   +++E F  +C
Sbjct: 776  DAARARLLLDQ--VDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASC 833

Query: 476  YAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLI 297
            YAAKVTLTALGEMF+AARSIM+WLGDCAKVIA +N PVRWTTPLGLPVVQPYRKLGRHLI
Sbjct: 834  YAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLI 893

Query: 296  KTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYW 117
            KTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACKR GLNFAGVHDSYW
Sbjct: 894  KTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYW 953

Query: 116  THACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            THACDVD MN+ILREKFVELY+ PILENLL SF++SFP
Sbjct: 954  THACDVDTMNKILREKFVELYDTPILENLLESFEKSFP 991


>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
          Length = 983

 Score = 1125 bits (2910), Expect = 0.0
 Identities = 547/698 (78%), Positives = 626/698 (89%), Gaps = 2/698 (0%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDM--EKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKG 1917
            EVRI+ FLEKTKKK++++M  E+EGG+ D+A KEQ +LR KVT+LMKKQK++QVR+IVK 
Sbjct: 264  EVRIHKFLEKTKKKSNKEMDNEEEGGDSDIA-KEQERLRKKVTDLMKKQKIRQVRNIVKK 322

Query: 1916 QDDVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQK 1737
            QD+ KPWGQDA AKVGSRLIEL++++AYIQPP  Q ADGPPDIRPAF H +RTV ++ QK
Sbjct: 323  QDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQK 382

Query: 1736 ISRRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGA 1557
             SRRYG+I+CDPLVRQG++RTA+HMVIPYMPMLIPP  W GYDKGA+LFLPSYVMRTHGA
Sbjct: 383  SSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGA 442

Query: 1556 KQQREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVP 1377
            +QQR+AV++ P++Q+  VFEAL TLG  KWRVNKR+L +VDR+W+SGG+ A LV+R DV 
Sbjct: 443  RQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVA 502

Query: 1376 LPEEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLD 1197
            LPE+P  EDE +L+ WRW      KENS+RHS RCD+ELKLAVARKMK EDGFYYPHNLD
Sbjct: 503  LPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLD 562

Query: 1196 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEG 1017
            FRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSY+G
Sbjct: 563  FRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYDG 621

Query: 1016 RIAFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPV 837
            RIAFTE++L++IFDSADRPLEG +WWL AEDPFQCLAVC+NL+EALRS SPET ISHIPV
Sbjct: 622  RIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPV 681

Query: 836  HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADS 657
            HQDGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RV EIM+ DA KDPA D 
Sbjct: 682  HQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDP 741

Query: 656  NVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLAC 477
            +  RA+LL+++  V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKERD   +++E F  +C
Sbjct: 742  DAARARLLLDQ--VDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASC 799

Query: 476  YAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLI 297
            YAAKVTLTALGEMF+AARSIM+WLGDCAKVIA +N PVRWTTPLGLPVVQPYRKLGRHLI
Sbjct: 800  YAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLI 859

Query: 296  KTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYW 117
            KTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACKR GLNFAGVHDSYW
Sbjct: 860  KTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYW 919

Query: 116  THACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            THACDVD MN+ILREKFVELY+ PILENLL SF++SFP
Sbjct: 920  THACDVDTMNKILREKFVELYDTPILENLLESFEKSFP 957


>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score = 1125 bits (2910), Expect = 0.0
 Identities = 549/699 (78%), Positives = 624/699 (89%), Gaps = 3/699 (0%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEKE---GGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVK 1920
            EVRI  FLEKT+KK++++MEKE    G+ D+A KEQ +LR KVT+LMKKQKL+QVR+IVK
Sbjct: 256  EVRINRFLEKTRKKSNKEMEKEEEAAGDTDIA-KEQQRLRKKVTDLMKKQKLRQVRNIVK 314

Query: 1919 GQDDVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQ 1740
             QD+ +PWGQD QAKVGSRLIEL + +A+IQPP  Q +DG PDIRPAF+H +RTV K+ Q
Sbjct: 315  NQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRTVAKEQQ 374

Query: 1739 KISRRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHG 1560
            K SRRYG+I+CDPLVRQG++RTA+HMVIPYMPMLIPP  W GYDKGA+LFLPSYVMRTHG
Sbjct: 375  KSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHG 434

Query: 1559 AKQQREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDV 1380
            A+QQREAVK+ P++Q+  VFEAL TLG  KWRVNKR+L +VDR+W+SGG+ A LV+R DV
Sbjct: 435  ARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDV 494

Query: 1379 PLPEEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNL 1200
            PLPE+P  EDE  ++NW+W      KENS+RHS RCD+ELKLAVARKMK E+GFYYPHNL
Sbjct: 495  PLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNL 554

Query: 1199 DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYE 1020
            DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLKIHLANL+ AGGVDKLSY+
Sbjct: 555  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLY-AGGVDKLSYD 613

Query: 1019 GRIAFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIP 840
            GR+AFTE++L+ IFDSADRPLEG +WWL AEDPFQCLAVCMNL+EALRSSSPETTISHIP
Sbjct: 614  GRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIP 673

Query: 839  VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAAD 660
            VHQDGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RV EIM+ DAQKDP+ D
Sbjct: 674  VHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQKDPSID 733

Query: 659  SNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLA 480
             +V RA+L++++  V+RKLVKQTVMTSVYGVTY+GARDQIK+RLKER    +EAE FG +
Sbjct: 734  PDVARARLIVDQ--VDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELFGAS 791

Query: 479  CYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHL 300
            CYAAKVTLTALGEMF+AAR IM+WLGDCAKVIA +N PVRWTTPLGLPVVQPYRKLGRHL
Sbjct: 792  CYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHL 851

Query: 299  IKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSY 120
            IKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACKR GLNFAGVHDSY
Sbjct: 852  IKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSY 911

Query: 119  WTHACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            WTHACDVD MN+ILREKFVELY+ PILENLL SF++SFP
Sbjct: 912  WTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFP 950


>ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Elaeis
            guineensis]
          Length = 1042

 Score = 1121 bits (2899), Expect = 0.0
 Identities = 550/702 (78%), Positives = 617/702 (87%), Gaps = 6/702 (0%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQD 1911
            EV+I+ FLEK+KKK + D +    E D   KEQ  LR +VTNLMKKQKL+QVR IVKGQD
Sbjct: 318  EVKIHRFLEKSKKKTNIDKKSGSAEVDNITKEQELLRKRVTNLMKKQKLQQVRKIVKGQD 377

Query: 1910 DVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKIS 1731
            D KPWGQD QAKVGSRLIELLV++AYIQPP++QLAD PPDIRPAF+H LR V+K+ +KIS
Sbjct: 378  DSKPWGQDTQAKVGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRNVQKEQKKIS 437

Query: 1730 RRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQ 1551
            RRYG IECDPLVRQG++RTARHMVIPYMPML+PP  W  YDKGA+LFLPSYVMRTHG++Q
Sbjct: 438  RRYGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFLPSYVMRTHGSRQ 497

Query: 1550 QREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLP 1371
            QR AVK+ P++Q+  VFEAL TLG+ KWRVNKR+L +VDR+W+SGG+ A LV+RDD PLP
Sbjct: 498  QRAAVKRAPREQMQLVFEALDTLGNTKWRVNKRVLNIVDRIWSSGGRLANLVDRDDNPLP 557

Query: 1370 EEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDFR 1191
            E+P  ED AE+R W+W      KENS+RHS RCD+E+KLAVARKMK E+GFYYPHNLDFR
Sbjct: 558  EKPETEDGAEIRKWKWKLKAVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDFR 617

Query: 1190 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRI 1011
            GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLKIHLANL+ AGGVDKLSY+GRI
Sbjct: 618  GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLY-AGGVDKLSYDGRI 676

Query: 1010 AFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQ 831
            AFTE++LD+IFDSADRPLEG +WWL AEDPFQCLAVC+NL+EALRSSSPE+TISHIPVHQ
Sbjct: 677  AFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQ 736

Query: 830  DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNV 651
            DGSCNGLQHYAALGRDKLGA +VNLVAGEKPADVYSGIA RVREIMQ+DAQKDPA D N 
Sbjct: 737  DGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAQKDPAMDPNA 796

Query: 650  LRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYA 471
              A+LLI  N V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKER    ++ E F  +CYA
Sbjct: 797  SHARLLI--NQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLESFRASCYA 854

Query: 470  AKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIKT 291
            AK TLTALGEMF+AARSIM WLGDCAKVIA +N  VRWTTPLGLPVVQPYRKLGRH+IKT
Sbjct: 855  AKTTLTALGEMFQAARSIMCWLGDCAKVIASENQAVRWTTPLGLPVVQPYRKLGRHIIKT 914

Query: 290  SLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNF------AGVH 129
            SLQVL+LQRETDK+MVKRQ+TAFPPNFVHSLDGSHMMMTA+ACKRAGLNF      AGVH
Sbjct: 915  SLQVLSLQRETDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGCLFSAGVH 974

Query: 128  DSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            DSYWTHACDVDEMNRILR+KFVELYE PILENL  SFQ+SFP
Sbjct: 975  DSYWTHACDVDEMNRILRDKFVELYEIPILENLRESFQQSFP 1016


>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
            X2 [Oryza brachyantha]
          Length = 839

 Score = 1121 bits (2899), Expect = 0.0
 Identities = 545/698 (78%), Positives = 622/698 (89%), Gaps = 2/698 (0%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDM--EKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKG 1917
            EVR++ FLEK KKK S++M  E+E G  D+A KEQ +LR KVT+LMKK KL+QVR+IVK 
Sbjct: 120  EVRLHKFLEKPKKKRSKEMDNEEEVGCSDIA-KEQERLRKKVTDLMKKHKLRQVRYIVKK 178

Query: 1916 QDDVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQK 1737
            QD+ KPWGQD  AKVGSRLIEL++++AYIQPP  Q ADGPPDIRPAF H +RTV K+ QK
Sbjct: 179  QDNSKPWGQDVHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAKEQQK 238

Query: 1736 ISRRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGA 1557
             SRRYG+I+CDPLVRQG++RTA+HMVIPYMPMLIPP  W GYDKGA+LFLPSYVMRTHGA
Sbjct: 239  SSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGA 298

Query: 1556 KQQREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVP 1377
            +QQREAVK+ P++Q+  VFEAL TLG  KWRVNKR+L +VDR+W+SGG+ A LV+R DV 
Sbjct: 299  RQQREAVKRAPREQMQSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVA 358

Query: 1376 LPEEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLD 1197
            LPE+P  EDEA+L+ WRW      KENS+RHS RCD+ELKLAVARKMK E+GFYYPHNLD
Sbjct: 359  LPEKPDTEDEAKLKKWRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD 418

Query: 1196 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEG 1017
            FRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSY+G
Sbjct: 419  FRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYDG 477

Query: 1016 RIAFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPV 837
            RIAFTE++L++IFDSADRPLEG +WWL AEDPFQCLAVC+NL+EALRS SPET ISHIPV
Sbjct: 478  RIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPV 537

Query: 836  HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADS 657
            HQDGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RV EIM+ DA KDPA D 
Sbjct: 538  HQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDP 597

Query: 656  NVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLAC 477
            +  RA++L+++  V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKERD  G+++E F  +C
Sbjct: 598  DAARARMLVDQ--VDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSASC 655

Query: 476  YAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLI 297
            YAAKVTLTALGEMF+AARSIM+WLGDCAK+IA +N PV+WTTPLGLPVVQPYRKLGRHLI
Sbjct: 656  YAAKVTLTALGEMFQAARSIMNWLGDCAKIIACENEPVKWTTPLGLPVVQPYRKLGRHLI 715

Query: 296  KTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYW 117
            KTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACKR GLNFAGVHDSYW
Sbjct: 716  KTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYW 775

Query: 116  THACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            THACDVD MN+ILREKFVELY+ PILENLL SF++SFP
Sbjct: 776  THACDVDTMNKILREKFVELYDTPILENLLGSFEKSFP 813


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|731418092|ref|XP_010660553.1|
            PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|298204431|emb|CBI16911.3| unnamed protein product
            [Vitis vinifera]
          Length = 1035

 Score = 1120 bits (2896), Expect = 0.0
 Identities = 550/698 (78%), Positives = 614/698 (87%), Gaps = 2/698 (0%)
 Frame = -1

Query: 2090 EVRIYIFLEKTK-KKASQDMEKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQ 1914
            EVRI+ FLEKTK KK  +D   EGG  D    EQ KLR KVTNLMKKQKL   R IVKG 
Sbjct: 315  EVRIHNFLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGH 374

Query: 1913 DDVKPWGQDAQAKVGSRLIELLVQSAYIQPPVD-QLADGPPDIRPAFKHTLRTVKKDGQK 1737
            D+ KPWG +A+AKVGSRLIELL+Q+AYIQPPVD QLAD PPDIRPAF HT +TV ++ +K
Sbjct: 375  DNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKK 434

Query: 1736 ISRRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGA 1557
            I RR+G+IECDPLV++G+ERTARHMVIPY+PML+PP KW GYDKGA+LFLPSYVMRTHGA
Sbjct: 435  IGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGA 494

Query: 1556 KQQREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVP 1377
            +QQREAVK+ P+ Q+ PVFEAL TLG+ KWR+NKRL  VVDR+WA GG  A LV+R+DVP
Sbjct: 495  RQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVP 554

Query: 1376 LPEEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLD 1197
            LPE+P  EDEA+LR W+W      K NS+RHS RCD+ELKLAVARKMK EDGF+YPHNLD
Sbjct: 555  LPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLD 614

Query: 1196 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEG 1017
            FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGL WLKIHLANLF AGGVDKLS+EG
Sbjct: 615  FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLF-AGGVDKLSHEG 673

Query: 1016 RIAFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPV 837
            RI FTE++LD+IFDSADRPLEG +WWL AEDPFQ LA C+NLSEALRSSSPETTISHIPV
Sbjct: 674  RITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPV 733

Query: 836  HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADS 657
            HQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVYSGIA RV +IM+ DA+KDPA   
Sbjct: 734  HQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFP 793

Query: 656  NVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLAC 477
            + LRA++LI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKER+   ++ E FG AC
Sbjct: 794  DALRARILI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAAC 851

Query: 476  YAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLI 297
            YAAK+TLTALGEMF+AARSIMSWLGDCAK+IA +N PVRWTTPLGLPVVQPYRKLGRHLI
Sbjct: 852  YAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLI 911

Query: 296  KTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYW 117
            KTSLQVLTLQRET+ +MVKRQ+TAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYW
Sbjct: 912  KTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYW 971

Query: 116  THACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            THACDVDEMNR+LREKFV+LYE PILENLL SFQ+SFP
Sbjct: 972  THACDVDEMNRLLREKFVQLYETPILENLLESFQQSFP 1009


>ref|XP_012438460.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial isoform X1
            [Gossypium raimondii] gi|763783438|gb|KJB50509.1|
            hypothetical protein B456_008G174700 [Gossypium
            raimondii]
          Length = 996

 Score = 1117 bits (2890), Expect = 0.0
 Identities = 545/702 (77%), Positives = 611/702 (87%), Gaps = 6/702 (0%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDM------EKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRH 1929
            E RI  FLEKTKKK + D       E E  E    AK + KLR KVT LMKKQK+ QVR 
Sbjct: 272  EARIQKFLEKTKKKNTTDKKSVTESEPETTEQGKLAKNEEKLRKKVTQLMKKQKVHQVRE 331

Query: 1928 IVKGQDDVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKK 1749
            IVKG+D  KPWGQ+A  KVG RLI+LL+++AYIQPPVDQ+ DGPPDIRPAF H L+ V K
Sbjct: 332  IVKGRDTSKPWGQEAHVKVGCRLIQLLMENAYIQPPVDQIGDGPPDIRPAFVHALKNVIK 391

Query: 1748 DGQKISRRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMR 1569
            DG K SRRYG+IECDPLVR+G+E+TA+HMVIPYMPML+PP  W GYD+GAYLFLPSYVMR
Sbjct: 392  DGNKGSRRYGVIECDPLVRKGLEKTAKHMVIPYMPMLVPPQNWTGYDQGAYLFLPSYVMR 451

Query: 1568 THGAKQQREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVER 1389
            THGAKQQRE VK+TP+KQ+ PVFEAL TLG+ KWR+N+R+LGVVDR+WA+GG+ A LV+R
Sbjct: 452  THGAKQQRETVKRTPRKQLEPVFEALDTLGNTKWRINRRILGVVDRLWANGGRLADLVDR 511

Query: 1388 DDVPLPEEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYP 1209
            +DVPLPEEP  EDE E+R W+W      KEN++RHS RCD+ELKLAVARKMK E GFYYP
Sbjct: 512  EDVPLPEEPDTEDETEIRKWKWKVKAVKKENNERHSQRCDVELKLAVARKMKDEVGFYYP 571

Query: 1208 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKL 1029
            HNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKL
Sbjct: 572  HNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKL 630

Query: 1028 SYEGRIAFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTIS 849
            SYEGR+ FTES+LD+IFDSADRPLEG +WWL AEDPFQCLA C+NLSEALRSS PE TIS
Sbjct: 631  SYEGRVEFTESHLDDIFDSADRPLEGKRWWLSAEDPFQCLAACINLSEALRSSIPEATIS 690

Query: 848  HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDP 669
            H+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIA RV +IM+ DAQ+DP
Sbjct: 691  HMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAQEDP 750

Query: 668  AADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQF 489
            A + N L A+LLI  N V+RKLVKQTVMTSVYGVTY+GARDQIK+RLKER    ++ + F
Sbjct: 751  ATNPNALHARLLI--NQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGAIADDTQLF 808

Query: 488  GLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLG 309
              +CYAA+ TLTALGEMF+AARSIM WLG+CAKVIA +N PVRW TPLGLPVVQPYR+LG
Sbjct: 809  VASCYAARTTLTALGEMFQAARSIMGWLGECAKVIASENQPVRWVTPLGLPVVQPYRQLG 868

Query: 308  RHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVH 129
            RHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVH
Sbjct: 869  RHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVH 928

Query: 128  DSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            DSYWTHACDVDEMNRILREKFVELYE PILENLL SFQ++FP
Sbjct: 929  DSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKAFP 970


>ref|XP_012088095.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Jatropha curcas]
          Length = 976

 Score = 1115 bits (2883), Expect = 0.0
 Identities = 548/697 (78%), Positives = 613/697 (87%), Gaps = 1/697 (0%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEK-EGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQ 1914
            EVRI+ FLEKTKKK +++ EK +  E +   KEQ KLR KVT+L++KQKL  VR IVKGQ
Sbjct: 257  EVRIHKFLEKTKKKKTRNSEKNQEEESNDMVKEQEKLRKKVTDLIRKQKLPAVRQIVKGQ 316

Query: 1913 DDVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKI 1734
            DD KPW QDA+AKVGSR+IELL+++AYIQPP DQ ADGPPDIRPAF HT RTV +  +K 
Sbjct: 317  DDSKPWSQDAKAKVGSRVIELLIRTAYIQPPADQRADGPPDIRPAFVHTFRTVTQGERKG 376

Query: 1733 SRRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAK 1554
            SRRYG+I+CDPLV +G+ER+ARHMVIPYMPML+PP KW GYDKGA+LFLPSYVMRTHG +
Sbjct: 377  SRRYGVIQCDPLVLKGLERSARHMVIPYMPMLVPPVKWTGYDKGAHLFLPSYVMRTHGVR 436

Query: 1553 QQREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPL 1374
            QQREAV+QT ++Q+ PVFEAL TLG  KWR+NKR+L V+DR+W SGG+ A LV+R+DVPL
Sbjct: 437  QQREAVRQTSKEQLQPVFEALDTLGRTKWRINKRILAVIDRIWNSGGRLADLVDRNDVPL 496

Query: 1373 PEEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDF 1194
            PEEP  E+EA L+ W+W      KEN +RHS RCD ELKLAVARKMK E+GFYYPHNLDF
Sbjct: 497  PEEPDTENEALLKKWKWRVKAVKKENKERHSQRCDTELKLAVARKMKDEEGFYYPHNLDF 556

Query: 1193 RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGR 1014
            RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKIHLANLF AGGVDK SY+GR
Sbjct: 557  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLF-AGGVDKFSYDGR 615

Query: 1013 IAFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVH 834
            IAFTE++LD+IFDSADRPLEG +WWL AEDPFQCLAVCM+L+EALRSSSPET ISHIP+H
Sbjct: 616  IAFTENHLDDIFDSADRPLEGKRWWLHAEDPFQCLAVCMDLTEALRSSSPETFISHIPIH 675

Query: 833  QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSN 654
            QDGSCNGLQHYAALGRDK GAAAVNLV GEKPADVYSGIA RV  IM+ DA+KDP    +
Sbjct: 676  QDGSCNGLQHYAALGRDKSGAAAVNLVTGEKPADVYSGIASRVLNIMRRDAEKDPVVFPD 735

Query: 653  VLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACY 474
             LRAK LI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKER    +E+E FG +CY
Sbjct: 736  ALRAKTLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIADESEIFGASCY 793

Query: 473  AAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIK 294
            AAKVTLTALGEMFEAARSIMSWLG+CAKVIA +N PVRWTTPLGLPVVQPYRKLGRHLIK
Sbjct: 794  AAKVTLTALGEMFEAARSIMSWLGECAKVIASENEPVRWTTPLGLPVVQPYRKLGRHLIK 853

Query: 293  TSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWT 114
            TSLQVLTLQ+ET+K+M+KRQ+TAFPPNFVHSLDGSHMMMTA+ACKRAGL FAGVHDSYWT
Sbjct: 854  TSLQVLTLQQETEKIMIKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLTFAGVHDSYWT 913

Query: 113  HACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            HACDVDEMNRILR+KFVELYE PILENLL SFQESFP
Sbjct: 914  HACDVDEMNRILRQKFVELYEIPILENLLESFQESFP 950


>ref|XP_012088094.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Jatropha curcas]
          Length = 1007

 Score = 1115 bits (2883), Expect = 0.0
 Identities = 548/697 (78%), Positives = 613/697 (87%), Gaps = 1/697 (0%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEK-EGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQ 1914
            EVRI+ FLEKTKKK +++ EK +  E +   KEQ KLR KVT+L++KQKL  VR IVKGQ
Sbjct: 288  EVRIHKFLEKTKKKKTRNSEKNQEEESNDMVKEQEKLRKKVTDLIRKQKLPAVRQIVKGQ 347

Query: 1913 DDVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKI 1734
            DD KPW QDA+AKVGSR+IELL+++AYIQPP DQ ADGPPDIRPAF HT RTV +  +K 
Sbjct: 348  DDSKPWSQDAKAKVGSRVIELLIRTAYIQPPADQRADGPPDIRPAFVHTFRTVTQGERKG 407

Query: 1733 SRRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAK 1554
            SRRYG+I+CDPLV +G+ER+ARHMVIPYMPML+PP KW GYDKGA+LFLPSYVMRTHG +
Sbjct: 408  SRRYGVIQCDPLVLKGLERSARHMVIPYMPMLVPPVKWTGYDKGAHLFLPSYVMRTHGVR 467

Query: 1553 QQREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPL 1374
            QQREAV+QT ++Q+ PVFEAL TLG  KWR+NKR+L V+DR+W SGG+ A LV+R+DVPL
Sbjct: 468  QQREAVRQTSKEQLQPVFEALDTLGRTKWRINKRILAVIDRIWNSGGRLADLVDRNDVPL 527

Query: 1373 PEEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDF 1194
            PEEP  E+EA L+ W+W      KEN +RHS RCD ELKLAVARKMK E+GFYYPHNLDF
Sbjct: 528  PEEPDTENEALLKKWKWRVKAVKKENKERHSQRCDTELKLAVARKMKDEEGFYYPHNLDF 587

Query: 1193 RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGR 1014
            RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKIHLANLF AGGVDK SY+GR
Sbjct: 588  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLF-AGGVDKFSYDGR 646

Query: 1013 IAFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVH 834
            IAFTE++LD+IFDSADRPLEG +WWL AEDPFQCLAVCM+L+EALRSSSPET ISHIP+H
Sbjct: 647  IAFTENHLDDIFDSADRPLEGKRWWLHAEDPFQCLAVCMDLTEALRSSSPETFISHIPIH 706

Query: 833  QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSN 654
            QDGSCNGLQHYAALGRDK GAAAVNLV GEKPADVYSGIA RV  IM+ DA+KDP    +
Sbjct: 707  QDGSCNGLQHYAALGRDKSGAAAVNLVTGEKPADVYSGIASRVLNIMRRDAEKDPVVFPD 766

Query: 653  VLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACY 474
             LRAK LI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKER    +E+E FG +CY
Sbjct: 767  ALRAKTLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIADESEIFGASCY 824

Query: 473  AAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIK 294
            AAKVTLTALGEMFEAARSIMSWLG+CAKVIA +N PVRWTTPLGLPVVQPYRKLGRHLIK
Sbjct: 825  AAKVTLTALGEMFEAARSIMSWLGECAKVIASENEPVRWTTPLGLPVVQPYRKLGRHLIK 884

Query: 293  TSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWT 114
            TSLQVLTLQ+ET+K+M+KRQ+TAFPPNFVHSLDGSHMMMTA+ACKRAGL FAGVHDSYWT
Sbjct: 885  TSLQVLTLQQETEKIMIKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLTFAGVHDSYWT 944

Query: 113  HACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            HACDVDEMNRILR+KFVELYE PILENLL SFQESFP
Sbjct: 945  HACDVDEMNRILRQKFVELYEIPILENLLESFQESFP 981


>gb|KDP24319.1| hypothetical protein JCGZ_25615 [Jatropha curcas]
          Length = 908

 Score = 1115 bits (2883), Expect = 0.0
 Identities = 548/697 (78%), Positives = 613/697 (87%), Gaps = 1/697 (0%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEK-EGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQ 1914
            EVRI+ FLEKTKKK +++ EK +  E +   KEQ KLR KVT+L++KQKL  VR IVKGQ
Sbjct: 189  EVRIHKFLEKTKKKKTRNSEKNQEEESNDMVKEQEKLRKKVTDLIRKQKLPAVRQIVKGQ 248

Query: 1913 DDVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKI 1734
            DD KPW QDA+AKVGSR+IELL+++AYIQPP DQ ADGPPDIRPAF HT RTV +  +K 
Sbjct: 249  DDSKPWSQDAKAKVGSRVIELLIRTAYIQPPADQRADGPPDIRPAFVHTFRTVTQGERKG 308

Query: 1733 SRRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAK 1554
            SRRYG+I+CDPLV +G+ER+ARHMVIPYMPML+PP KW GYDKGA+LFLPSYVMRTHG +
Sbjct: 309  SRRYGVIQCDPLVLKGLERSARHMVIPYMPMLVPPVKWTGYDKGAHLFLPSYVMRTHGVR 368

Query: 1553 QQREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPL 1374
            QQREAV+QT ++Q+ PVFEAL TLG  KWR+NKR+L V+DR+W SGG+ A LV+R+DVPL
Sbjct: 369  QQREAVRQTSKEQLQPVFEALDTLGRTKWRINKRILAVIDRIWNSGGRLADLVDRNDVPL 428

Query: 1373 PEEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDF 1194
            PEEP  E+EA L+ W+W      KEN +RHS RCD ELKLAVARKMK E+GFYYPHNLDF
Sbjct: 429  PEEPDTENEALLKKWKWRVKAVKKENKERHSQRCDTELKLAVARKMKDEEGFYYPHNLDF 488

Query: 1193 RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGR 1014
            RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKIHLANLF AGGVDK SY+GR
Sbjct: 489  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLF-AGGVDKFSYDGR 547

Query: 1013 IAFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVH 834
            IAFTE++LD+IFDSADRPLEG +WWL AEDPFQCLAVCM+L+EALRSSSPET ISHIP+H
Sbjct: 548  IAFTENHLDDIFDSADRPLEGKRWWLHAEDPFQCLAVCMDLTEALRSSSPETFISHIPIH 607

Query: 833  QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSN 654
            QDGSCNGLQHYAALGRDK GAAAVNLV GEKPADVYSGIA RV  IM+ DA+KDP    +
Sbjct: 608  QDGSCNGLQHYAALGRDKSGAAAVNLVTGEKPADVYSGIASRVLNIMRRDAEKDPVVFPD 667

Query: 653  VLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACY 474
             LRAK LI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKER    +E+E FG +CY
Sbjct: 668  ALRAKTLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIADESEIFGASCY 725

Query: 473  AAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIK 294
            AAKVTLTALGEMFEAARSIMSWLG+CAKVIA +N PVRWTTPLGLPVVQPYRKLGRHLIK
Sbjct: 726  AAKVTLTALGEMFEAARSIMSWLGECAKVIASENEPVRWTTPLGLPVVQPYRKLGRHLIK 785

Query: 293  TSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWT 114
            TSLQVLTLQ+ET+K+M+KRQ+TAFPPNFVHSLDGSHMMMTA+ACKRAGL FAGVHDSYWT
Sbjct: 786  TSLQVLTLQQETEKIMIKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLTFAGVHDSYWT 845

Query: 113  HACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            HACDVDEMNRILR+KFVELYE PILENLL SFQESFP
Sbjct: 846  HACDVDEMNRILRQKFVELYEIPILENLLESFQESFP 882


>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|590698457|ref|XP_007045722.1| DNA-directed RNA
            polymerase isoform 1 [Theobroma cacao]
            gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
            DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 996

 Score = 1112 bits (2877), Expect = 0.0
 Identities = 542/702 (77%), Positives = 616/702 (87%), Gaps = 6/702 (0%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKKASQDMEKEG-GEP-----DLAAKEQAKLRNKVTNLMKKQKLKQVRH 1929
            E +I  FL KTKKK + D + +G  EP     +   K+Q KLR KVT L+KKQK+ QVR 
Sbjct: 272  EAKIQSFLGKTKKKKTTDKKPDGESEPVTNKQEKLVKDQEKLRKKVTQLLKKQKVHQVRK 331

Query: 1928 IVKGQDDVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKK 1749
            IVKG D  K WGQ+A  KVG RLI+LL+++AYIQPPVDQL D PPDIRPAF H+L+T+ K
Sbjct: 332  IVKGHDTSKSWGQEAHVKVGCRLIQLLIENAYIQPPVDQLGDCPPDIRPAFVHSLKTITK 391

Query: 1748 DGQKISRRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMR 1569
            DG K SRRYG+IECD LVR+G+E+TARHMVIPYMPML+PP  W GYD+GAYLFLPSYVMR
Sbjct: 392  DGNKGSRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTGYDRGAYLFLPSYVMR 451

Query: 1568 THGAKQQREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVER 1389
            THGAKQQRE VK+TP+KQ+ P+FEAL TLG+ KWR+NKR+LGVVDR+WA+GG+ A LV+R
Sbjct: 452  THGAKQQRETVKRTPRKQLEPIFEALDTLGNTKWRINKRVLGVVDRLWANGGRVASLVDR 511

Query: 1388 DDVPLPEEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYP 1209
            +DVPLPE+P  EDEAE++ W+W      K+N++RHS RCD+ELKLAVARKM+ EDGFYYP
Sbjct: 512  EDVPLPEKPDTEDEAEIQKWKWKVKAANKQNNERHSLRCDVELKLAVARKMRDEDGFYYP 571

Query: 1208 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKL 1029
            HNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKL
Sbjct: 572  HNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKL 630

Query: 1028 SYEGRIAFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTIS 849
            SYEGRIAFTE++LD+IFDSADRPLEG +WWL AEDPFQCLA C+NLSEALRSSSPETTIS
Sbjct: 631  SYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTIS 690

Query: 848  HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDP 669
            H+PVHQDGSCNGLQHYAALGRDKLGAA+VNLVAGEKPADVYSGIA RV +IM+ DA+KDP
Sbjct: 691  HMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKDP 750

Query: 668  AADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQF 489
            A + + L A+LLI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKER    ++ E F
Sbjct: 751  AINPHALHARLLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMF 808

Query: 488  GLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLG 309
              +CYAA+ TLTALGEMF+AARSIM+WLG+CAKVI+ +N PVRW TPLGLPVVQPYR+LG
Sbjct: 809  VASCYAARTTLTALGEMFQAARSIMNWLGECAKVISSENQPVRWVTPLGLPVVQPYRQLG 868

Query: 308  RHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVH 129
            RHLIKTSLQVLTLQRETDKVM KRQ+TAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVH
Sbjct: 869  RHLIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVH 928

Query: 128  DSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            DSYWTHACDVDEMNRILREKFVELYE PILENLL SFQ+SFP
Sbjct: 929  DSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 970


>ref|XP_012835044.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Erythranthe guttatus]
            gi|604335441|gb|EYU39350.1| hypothetical protein
            MIMGU_mgv1a000681mg [Erythranthe guttata]
          Length = 1021

 Score = 1109 bits (2868), Expect = 0.0
 Identities = 536/697 (76%), Positives = 613/697 (87%), Gaps = 1/697 (0%)
 Frame = -1

Query: 2090 EVRIYIFLEKTKKK-ASQDMEKEGGEPDLAAKEQAKLRNKVTNLMKKQKLKQVRHIVKGQ 1914
            EVRI+ FLEKTKKK  ++D E EG +PD   +EQAKLR KVTNLMKKQKL+ VR IV  Q
Sbjct: 302  EVRIHYFLEKTKKKKVTKDAETEGDKPDENIQEQAKLREKVTNLMKKQKLRAVRQIVNRQ 361

Query: 1913 DDVKPWGQDAQAKVGSRLIELLVQSAYIQPPVDQLADGPPDIRPAFKHTLRTVKKDGQKI 1734
             + + WGQDA+AKVGSRLIEL++Q+AYIQPP  Q A+GPPDI+PAF HT +TV K+ +  
Sbjct: 362  IESQAWGQDAKAKVGSRLIELIIQTAYIQPPASQSAEGPPDIKPAFLHTFKTVAKEIKSN 421

Query: 1733 SRRYGMIECDPLVRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAK 1554
            SRRYG+I+CDPLVR+G+ERTARHMVIPYMPML+PP KW GYDKGAYL+LPSYVMRTHGA+
Sbjct: 422  SRRYGVIQCDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYLYLPSYVMRTHGAR 481

Query: 1553 QQREAVKQTPQKQIGPVFEALGTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPL 1374
            QQR+ VK+ P++Q+ PVFEAL TLG  KWRVNKR+L ++DR+WASGG+   LV+RDD+ L
Sbjct: 482  QQRDTVKRAPREQLKPVFEALDTLGSTKWRVNKRVLSIIDRIWASGGRLGDLVDRDDILL 541

Query: 1373 PEEPAMEDEAELRNWRWXXXXXXKENSKRHSHRCDLELKLAVARKMKAEDGFYYPHNLDF 1194
            PE+P  EDE+ L+ W+W      KENS+RHS RCD ELKLAVARKMK E+GF+YPHN+DF
Sbjct: 542  PEQPDTEDESLLQKWKWKVKSIKKENSERHSQRCDTELKLAVARKMKEEEGFFYPHNVDF 601

Query: 1193 RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGR 1014
            RGRAYPMHP+LNHLGSD+CRGILEF+EG+PLGKSGLRWLKIH+ANLF A GVDKLS+EGR
Sbjct: 602  RGRAYPMHPHLNHLGSDICRGILEFSEGKPLGKSGLRWLKIHVANLF-ANGVDKLSHEGR 660

Query: 1013 IAFTESNLDNIFDSADRPLEGNKWWLEAEDPFQCLAVCMNLSEALRSSSPETTISHIPVH 834
            I F E++LD++FDSADRPLEG +WWL AEDPFQCLA C+NL EALR+ SPETTISHIPVH
Sbjct: 661  ICFIENHLDDVFDSADRPLEGKRWWLNAEDPFQCLAACINLVEALRNPSPETTISHIPVH 720

Query: 833  QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSN 654
            QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RV +IM+EDAQKDP+   +
Sbjct: 721  QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKEDAQKDPSVCPD 780

Query: 653  VLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACY 474
             L A+LLI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKERD  G+E + FG ACY
Sbjct: 781  ALHARLLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAFGDETQIFGAACY 838

Query: 473  AAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRKLGRHLIK 294
            AAK+TLTALG+MFEAARSIM+WLGDCAK+IA +N PVRWTTPLGLPVVQPYRK+GRHLIK
Sbjct: 839  AAKITLTALGQMFEAARSIMNWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKVGRHLIK 898

Query: 293  TSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWT 114
            TSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC+  GL FAGVHDSYWT
Sbjct: 899  TSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACRNGGLTFAGVHDSYWT 958

Query: 113  HACDVDEMNRILREKFVELYEQPILENLLASFQESFP 3
            HACDVDEM+RILREKFVELYE PILENLL  FQ+SFP
Sbjct: 959  HACDVDEMSRILREKFVELYEAPILENLLEGFQQSFP 995