BLASTX nr result
ID: Papaver31_contig00006364
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00006364
(1271 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KFK45117.1| hypothetical protein AALP_AA1G346500, partial [Ar... 207 2e-50
ref|XP_010051209.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 201 1e-48
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana] 199 3e-48
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 198 7e-48
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 198 9e-48
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 198 9e-48
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 198 9e-48
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana] 198 9e-48
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 198 9e-48
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 198 9e-48
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 198 9e-48
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 198 9e-48
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana] 197 1e-47
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana] 197 1e-47
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 197 2e-47
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana] 196 3e-47
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 196 4e-47
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th... 196 4e-47
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 196 4e-47
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana] 196 4e-47
>gb|KFK45117.1| hypothetical protein AALP_AA1G346500, partial [Arabis alpina]
Length = 1203
Score = 207 bits (526), Expect = 2e-50
Identities = 112/283 (39%), Positives = 155/283 (54%), Gaps = 17/283 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPVTHKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLSLFV 656
WH R+GH + +I +KFSLP + + C C I IV PL
Sbjct: 473 WHHRLGHPSTTILHNIVSKFSLPCSRSVNNVCSDCAINKTHKLPFSQTSIVSTYPLEYVF 532
Query: 655 SDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHRIKI 476
+D+W SP LS + Y+YYL+++ YS TW++PL S + F+ F VEN + +IK
Sbjct: 533 TDLWSSPVLSIDNYKYYLVLVDHYSRYTWMYPLKLKSQVKETFIAFKALVENRFNTKIKT 592
Query: 475 FQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHIPIS 296
S+N EF A+L+ SGI H S PHT NGI E + RH+ E GL LL HA +P +
Sbjct: 593 LYSDNGGEFMALKAFLSSSGISHLTSPPHTPEHNGISERKHRHIVETGLTLLTHAKMPKT 652
Query: 295 FCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSNKLE 116
+ S AFT A YLINR+P + +P++ LF P+Y+ L+VFGCL +P L+PYN+NKL+
Sbjct: 653 YWSYAFTTATYLINRMPTPVLDMESPVQKLFGSQPNYSKLRVFGCLCFPWLRPYNTNKLQ 712
Query: 115 PRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
RS L + R+YI+ HV F+E F F
Sbjct: 713 DRSTPCIFIGYSQTQSAYLCLQPSSGRVYITRHVKFDESSFPF 755
>ref|XP_010051209.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104439906
[Eucalyptus grandis]
Length = 2021
Score = 201 bits (510), Expect = 1e-48
Identities = 106/287 (36%), Positives = 160/287 (55%), Gaps = 20/287 (6%)
Frame = -2
Query: 838 IWHQRMGHLMMRTVSSICNKFSLPVTHKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLSLF 659
+WHQR+ H ++T+ + N+ + + + C SC I + V PL
Sbjct: 531 LWHQRLAHTNLKTLQYLQNQQHIYCNTRIQNTCRSCQIAKHTALPFPLSESVTSTPLEKV 590
Query: 658 VSDIW-VSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHRI 482
DIW SP +S ++YY++++ +S +W++P+ +D + +F+ F KQVEN D +I
Sbjct: 591 HCDIWGPSPVISFQNFKYYVILVDDFSRFSWIYPMRAKADFYDIFILFQKQVENQLDCKI 650
Query: 481 KIFQSNNALEF--KKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAH 308
K FQ + EF KF +L+ GI+ + S PHT QNG+ E + RHV E GLA+L+HA
Sbjct: 651 KTFQCDGGGEFISHKFQTHLHSHGIKQQVSCPHTPEQNGVSERKHRHVVELGLAMLYHAE 710
Query: 307 IPISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNS 128
+P+ + DAF A Y+IN LP K + +P L++K P Y L+VFGC +PCL+PY
Sbjct: 711 VPLKYWVDAFLTAIYIINMLPTPKLQMQSPYSRLYQKEPSYDHLRVFGCACFPCLRPYAQ 770
Query: 127 NKLEPRSL----------HR-------ETNRMYISLHVGFEEKIFSF 38
+KL+ RSL H+ T R+YIS HV F+E+ F F
Sbjct: 771 HKLDSRSLTCIFIGYSARHKGYRCLVPTTGRIYISKHVIFDERFFPF 817
>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 199 bits (507), Expect = 3e-48
Identities = 111/290 (38%), Positives = 153/290 (52%), Gaps = 20/290 (6%)
Frame = -2
Query: 847 SYLIWHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXKIVYD 677
++ +WH R+GH + ++S+ + SLPV +HK C C I I
Sbjct: 461 THCLWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSS 519
Query: 676 KPLSLFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENL 497
KPL SD+W SP LS + YRYY++ + ++ TW++PL + S F+ F VEN
Sbjct: 520 KPLEYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENR 579
Query: 496 TDHRIKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLF 317
RI S+N EF YL++ GI H S PHT NG+ E + RH+ E GL LL
Sbjct: 580 FQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLS 639
Query: 316 HAHIPISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQP 137
HA +P ++ AF+ A YLINRLP + +P + LF + P+Y LKVFGC YP L+P
Sbjct: 640 HASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRP 699
Query: 136 YNSNKLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
YN +KLE +S LH T R+Y S HV F+E+ F F
Sbjct: 700 YNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPF 749
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 198 bits (504), Expect = 7e-48
Identities = 112/285 (39%), Positives = 156/285 (54%), Gaps = 18/285 (6%)
Frame = -2
Query: 838 IWHQRMGHLMMRTVSSICNKFSLPVTHKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLSLF 659
+WH R+GH V+ I + ++ + C SC + KPL L
Sbjct: 485 LWHHRLGHAATDIVTRIMHNCNVSCGKYKATVCSSCQLAKSHRLPTHLSSFHASKPLELV 544
Query: 658 VSDIWVSPHL-SRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHRI 482
+DIW + S +G +Y++L + YS TW++ L A +F F QVEN + +I
Sbjct: 545 YTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFEAKI 604
Query: 481 KIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHIP 302
K Q +N EF+ F ++L ESGI HRFS P+ S QNG E + RHV E GLALL HA +P
Sbjct: 605 KCLQXDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLP 664
Query: 301 ISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSNK 122
+ F S AF A +LINR+P +++P LFK+ PDY FL+VFGCL YP ++PYN++K
Sbjct: 665 LKFWSYAFQTATFLINRMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNHK 724
Query: 121 LEPR---------SLHRE--------TNRMYISLHVGFEEKIFSF 38
L+ R SLH + T R+Y+S HV F+E F F
Sbjct: 725 LQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPF 769
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 198 bits (503), Expect = 9e-48
Identities = 111/286 (38%), Positives = 150/286 (52%), Gaps = 20/286 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLS 665
WH R+GH + ++S+ + SLPV +HK C C I I KPL
Sbjct: 465 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523
Query: 664 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 485
SD+W SP LS + YRYY++ + ++ TW++PL + S F+ F VEN R
Sbjct: 524 YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583
Query: 484 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 305
I S+N EF YL++ GI H S PHT NG+ E + RH+ E GL LL HA +
Sbjct: 584 IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643
Query: 304 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 125
P ++ AF+ A YLINRLP + +P + LF + P+Y LKVFGC YP L+PYN +
Sbjct: 644 PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703
Query: 124 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
KLE +S LH T R+Y S HV F+E+ F F
Sbjct: 704 KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPF 749
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 198 bits (503), Expect = 9e-48
Identities = 111/286 (38%), Positives = 150/286 (52%), Gaps = 20/286 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLS 665
WH R+GH + ++S+ + SLPV +HK C C I I KPL
Sbjct: 320 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 378
Query: 664 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 485
SD+W SP LS + YRYY++ + ++ TW++PL + S F+ F VEN R
Sbjct: 379 YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 438
Query: 484 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 305
I S+N EF YL++ GI H S PHT NG+ E + RH+ E GL LL HA +
Sbjct: 439 IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 498
Query: 304 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 125
P ++ AF+ A YLINRLP + +P + LF + P+Y LKVFGC YP L+PYN +
Sbjct: 499 PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 558
Query: 124 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
KLE +S LH T R+Y S HV F+E+ F F
Sbjct: 559 KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPF 604
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 198 bits (503), Expect = 9e-48
Identities = 112/286 (39%), Positives = 154/286 (53%), Gaps = 20/286 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPVTH---KQFDFCHSCHIRXXXXXXXXXXKIVYDKPLS 665
WHQR+GH + + + + F LP+++ KQ C C I IV +PL
Sbjct: 450 WHQRLGHPALPILKDVVSHFHLPLSNTIPKQLP-CSDCSINKSHKLPFFTNTIVSSQPLE 508
Query: 664 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 485
+D+W SP +S + Y+YYL+I+ ++ TW++PL + S +FV F VEN R
Sbjct: 509 YLYTDVWTSPCISVDNYKYYLVIVDHFTRYTWMYPLKQKSQVKDVFVAFKALVENRFQSR 568
Query: 484 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 305
I+ S+N EF +L GI H S PHT NG+ E + RH+ E GLALL HA +
Sbjct: 569 IRTLYSDNGGEFIGLRPFLAAHGISHLTSPPHTPEHNGLAERKHRHIVETGLALLTHASL 628
Query: 304 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 125
P +F + AF A YLINR+P + ++P LF+ +P+Y L+VFGCL YP L+PYN+N
Sbjct: 629 PKTFWTYAFATAVYLINRMPTEVLQGTSPYVKLFQMSPNYLKLRVFGCLCYPWLRPYNTN 688
Query: 124 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
KLE RS L TNR+Y S HV F E F F
Sbjct: 689 KLEARSTMCVFLGYSLTQSAYLCLDIATNRIYTSRHVQFVESSFPF 734
>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 198 bits (503), Expect = 9e-48
Identities = 111/286 (38%), Positives = 150/286 (52%), Gaps = 20/286 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLS 665
WH R+GH + ++S+ + SLPV +HK C C I I KPL
Sbjct: 465 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523
Query: 664 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 485
SD+W SP LS + YRYY++ + ++ TW++PL + S F+ F VEN R
Sbjct: 524 YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583
Query: 484 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 305
I S+N EF YL++ GI H S PHT NG+ E + RH+ E GL LL HA +
Sbjct: 584 IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643
Query: 304 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 125
P ++ AF+ A YLINRLP + +P + LF + P+Y LKVFGC YP L+PYN +
Sbjct: 644 PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703
Query: 124 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
KLE +S LH T R+Y S HV F+E+ F F
Sbjct: 704 KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPF 749
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 198 bits (503), Expect = 9e-48
Identities = 111/286 (38%), Positives = 150/286 (52%), Gaps = 20/286 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLS 665
WH R+GH + ++S+ + SLPV +HK C C I I KPL
Sbjct: 465 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523
Query: 664 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 485
SD+W SP LS + YRYY++ + ++ TW++PL + S F+ F VEN R
Sbjct: 524 YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583
Query: 484 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 305
I S+N EF YL++ GI H S PHT NG+ E + RH+ E GL LL HA +
Sbjct: 584 IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643
Query: 304 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 125
P ++ AF+ A YLINRLP + +P + LF + P+Y LKVFGC YP L+PYN +
Sbjct: 644 PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703
Query: 124 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
KLE +S LH T R+Y S HV F+E+ F F
Sbjct: 704 KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPF 749
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 198 bits (503), Expect = 9e-48
Identities = 111/286 (38%), Positives = 150/286 (52%), Gaps = 20/286 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLS 665
WH R+GH + ++S+ + SLPV +HK C C I I KPL
Sbjct: 465 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523
Query: 664 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 485
SD+W SP LS + YRYY++ + ++ TW++PL + S F+ F VEN R
Sbjct: 524 YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583
Query: 484 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 305
I S+N EF YL++ GI H S PHT NG+ E + RH+ E GL LL HA +
Sbjct: 584 IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643
Query: 304 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 125
P ++ AF+ A YLINRLP + +P + LF + P+Y LKVFGC YP L+PYN +
Sbjct: 644 PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703
Query: 124 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
KLE +S LH T R+Y S HV F+E+ F F
Sbjct: 704 KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPF 749
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 198 bits (503), Expect = 9e-48
Identities = 111/286 (38%), Positives = 150/286 (52%), Gaps = 20/286 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLS 665
WH R+GH + ++S+ + SLPV +HK C C I I KPL
Sbjct: 465 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523
Query: 664 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 485
SD+W SP LS + YRYY++ + ++ TW++PL + S F+ F VEN R
Sbjct: 524 YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583
Query: 484 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 305
I S+N EF YL++ GI H S PHT NG+ E + RH+ E GL LL HA +
Sbjct: 584 IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643
Query: 304 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 125
P ++ AF+ A YLINRLP + +P + LF + P+Y LKVFGC YP L+PYN +
Sbjct: 644 PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703
Query: 124 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
KLE +S LH T R+Y S HV F+E+ F F
Sbjct: 704 KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPF 749
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 198 bits (503), Expect = 9e-48
Identities = 111/286 (38%), Positives = 150/286 (52%), Gaps = 20/286 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLS 665
WH R+GH + ++S+ + SLPV +HK C C I I KPL
Sbjct: 446 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 504
Query: 664 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 485
SD+W SP LS + YRYY++ + ++ TW++PL + S F+ F VEN R
Sbjct: 505 YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 564
Query: 484 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 305
I S+N EF YL++ GI H S PHT NG+ E + RH+ E GL LL HA +
Sbjct: 565 IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 624
Query: 304 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 125
P ++ AF+ A YLINRLP + +P + LF + P+Y LKVFGC YP L+PYN +
Sbjct: 625 PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 684
Query: 124 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
KLE +S LH T R+Y S HV F+E+ F F
Sbjct: 685 KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPF 730
>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 197 bits (502), Expect = 1e-47
Identities = 111/286 (38%), Positives = 150/286 (52%), Gaps = 20/286 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLS 665
WH R+GH + ++S+ + SLPV +HK C C I I KPL
Sbjct: 465 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523
Query: 664 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 485
SD+W SP LS + YRYY++ + ++ TW++PL + S F+ F VEN R
Sbjct: 524 YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583
Query: 484 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 305
I S+N EF YL++ GI H S PHT NG+ E + RH+ E GL LL HA +
Sbjct: 584 IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643
Query: 304 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 125
P ++ AF+ A YLINRLP + +P + LF + P+Y LKVFGC YP L+PYN +
Sbjct: 644 PKTYWLYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703
Query: 124 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
KLE +S LH T R+Y S HV F+E+ F F
Sbjct: 704 KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPF 749
>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 197 bits (502), Expect = 1e-47
Identities = 111/286 (38%), Positives = 150/286 (52%), Gaps = 20/286 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLS 665
WH R+GH + ++S+ + SLPV +HK C C I I KPL
Sbjct: 465 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523
Query: 664 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 485
SD+W SP LS + YRYY++ + ++ TW++PL + S F+ F VEN R
Sbjct: 524 YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583
Query: 484 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 305
I S+N EF YL++ GI H S PHT NG+ E + RH+ E GL LL HA +
Sbjct: 584 IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643
Query: 304 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 125
P ++ AF+ A YLINRLP + +P + LF + P+Y LKVFGC YP L+PYN +
Sbjct: 644 PKTYWLYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703
Query: 124 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
KLE +S LH T R+Y S HV F+E+ F F
Sbjct: 704 KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPF 749
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 197 bits (501), Expect = 2e-47
Identities = 110/286 (38%), Positives = 150/286 (52%), Gaps = 20/286 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLS 665
WH R+GH + ++S+ + SLPV +HK C C I I KPL
Sbjct: 465 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523
Query: 664 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 485
SD+W SP LS + YRYY++ + ++ TW++PL + S F+ F VEN R
Sbjct: 524 YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583
Query: 484 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 305
I S+N EF YL++ GI H S PHT NG+ E + RH+ E GL +L HA +
Sbjct: 584 IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTILSHASV 643
Query: 304 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 125
P ++ AF+ A YLINRLP + +P + LF + P+Y LKVFGC YP L+PYN +
Sbjct: 644 PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703
Query: 124 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
KLE +S LH T R+Y S HV F+E+ F F
Sbjct: 704 KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPF 749
>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 196 bits (499), Expect = 3e-47
Identities = 110/286 (38%), Positives = 150/286 (52%), Gaps = 20/286 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXKIVYDKPLS 665
WH R+GH + ++S+ + SLPV +HK C C I I KPL
Sbjct: 465 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523
Query: 664 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 485
SD+W SP LS + YRYY++ + ++ TW++PL + S F+ F VEN R
Sbjct: 524 YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583
Query: 484 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 305
I S+N +F YL++ GI H S PHT NG+ E + RH+ E GL LL HA +
Sbjct: 584 IGTLYSDNGGKFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643
Query: 304 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 125
P ++ AF+ A YLINRLP + +P + LF + P+Y LKVFGC YP L+PYN +
Sbjct: 644 PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703
Query: 124 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
KLE +S LH T R+Y S HV F+E+ F F
Sbjct: 704 KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPF 749
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 196 bits (498), Expect = 4e-47
Identities = 107/285 (37%), Positives = 150/285 (52%), Gaps = 19/285 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPVTHKQFDF--CHSCHIRXXXXXXXXXXKIVYDKPLSL 662
WH R+GH ++S+ + +SL V + F C C I I +PL
Sbjct: 467 WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEY 526
Query: 661 FVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHRI 482
SD+W SP LS + YRYY++ + ++ TW++PL + S + F+ F +EN RI
Sbjct: 527 IYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRI 586
Query: 481 KIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHIP 302
F S+N EF Y ++ GI H S PHT NG+ E + RH+ E GL LL HA IP
Sbjct: 587 GTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIP 646
Query: 301 ISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSNK 122
++ AF A YLINRLP + +P + LF +P+Y L+VFGC YP L+PYN +K
Sbjct: 647 KTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHK 706
Query: 121 LEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
L+ +S LH +T+R+YIS HV F+E F F
Sbjct: 707 LDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPF 751
>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
Length = 847
Score = 196 bits (498), Expect = 4e-47
Identities = 107/285 (37%), Positives = 150/285 (52%), Gaps = 19/285 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPVTHKQFDF--CHSCHIRXXXXXXXXXXKIVYDKPLSL 662
WH R+GH ++S+ + +SL V + F C C I I +PL
Sbjct: 432 WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEY 491
Query: 661 FVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHRI 482
SD+W SP LS + YRYY++ + ++ TW++PL + S + F+ F +EN RI
Sbjct: 492 IYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRI 551
Query: 481 KIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHIP 302
F S+N EF Y ++ GI H S PHT NG+ E + RH+ E GL LL HA IP
Sbjct: 552 GTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIP 611
Query: 301 ISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSNK 122
++ AF A YLINRLP + +P + LF +P+Y L+VFGC YP L+PYN +K
Sbjct: 612 KTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHK 671
Query: 121 LEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
L+ +S LH +T+R+YIS HV F+E F F
Sbjct: 672 LDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPF 716
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 196 bits (498), Expect = 4e-47
Identities = 107/285 (37%), Positives = 150/285 (52%), Gaps = 19/285 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPVTHKQFDF--CHSCHIRXXXXXXXXXXKIVYDKPLSL 662
WH R+GH ++S+ + +SL V + F C C I I +PL
Sbjct: 432 WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEY 491
Query: 661 FVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHRI 482
SD+W SP LS + YRYY++ + ++ TW++PL + S + F+ F +EN RI
Sbjct: 492 IYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRI 551
Query: 481 KIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHIP 302
F S+N EF Y ++ GI H S PHT NG+ E + RH+ E GL LL HA IP
Sbjct: 552 GTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIP 611
Query: 301 ISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSNK 122
++ AF A YLINRLP + +P + LF +P+Y L+VFGC YP L+PYN +K
Sbjct: 612 KTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHK 671
Query: 121 LEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
L+ +S LH +T+R+YIS HV F+E F F
Sbjct: 672 LDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPF 716
>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
Length = 1048
Score = 196 bits (498), Expect = 4e-47
Identities = 107/285 (37%), Positives = 150/285 (52%), Gaps = 19/285 (6%)
Frame = -2
Query: 835 WHQRMGHLMMRTVSSICNKFSLPVTHKQFDF--CHSCHIRXXXXXXXXXXKIVYDKPLSL 662
WH R+GH ++S+ + +SL V + F C C I I +PL
Sbjct: 462 WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEY 521
Query: 661 FVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHRI 482
SD+W SP LS + YRYY++ + ++ TW++PL + S + F+ F +EN RI
Sbjct: 522 IYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRI 581
Query: 481 KIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHIP 302
F S+N EF Y ++ GI H S PHT NG+ E + RH+ E GL LL HA IP
Sbjct: 582 GTFYSDNGGEFVALREYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIP 641
Query: 301 ISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSNK 122
++ AF A YLINRLP + +P + LF +P+Y L+VFGC YP L+PYN +K
Sbjct: 642 KTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHK 701
Query: 121 LEPRS-----------------LHRETNRMYISLHVGFEEKIFSF 38
L+ +S LH +T+R+YIS HV F+E F F
Sbjct: 702 LDDKSRQCVFLGYSLTQSAYLCLHLQTSRIYISRHVRFDENCFPF 746