BLASTX nr result

ID: Papaver31_contig00006276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00006276
         (876 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN86557.1| papaver rhoeas pollen S [Papaver rhoeas]               58   8e-06
emb|CAX48743.1| pollen S [Papaver rhoeas]                              58   8e-06

>emb|CAN86557.1| papaver rhoeas pollen S [Papaver rhoeas]
          Length = 193

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
 Frame = -2

Query: 581 SSKIVPLISIC-----MLCVVSLGWDRDHSGLTEGMLIASGKWFIISTMAMKLEQSAMCG 417
           ++ + P+ SIC     M+CVV+ GWDRD SG+TEG LI  GK  +++ +      S M G
Sbjct: 96  TTNMTPVTSICFLSSIMICVVAAGWDRDRSGMTEGFLIGFGKLLLVNLIREDCTASVMYG 155

Query: 416 LVLAFSIICLLT 381
            VL  +I+   T
Sbjct: 156 SVLFLAIVAKFT 167


>emb|CAX48743.1| pollen S [Papaver rhoeas]
          Length = 191

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 24/74 (32%), Positives = 44/74 (59%)
 Frame = -2

Query: 590 NTNSSKIVPLISICMLCVVSLGWDRDHSGLTEGMLIASGKWFIISTMAMKLEQSAMCGLV 411
           N +++  +  I++ M+CVV++GW RD SG+TEG  +  GK  +I+  +  L  +   G+V
Sbjct: 98  NMHATAALSFIALIMICVVAIGWGRDRSGMTEGFFVGFGKLLLINLFSGNLPSALFTGIV 157

Query: 410 LAFSIICLLTSVGE 369
           L  +++  LT   +
Sbjct: 158 LFLAVVAKLTECAD 171


Top