BLASTX nr result

ID: Papaver31_contig00006275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00006275
         (1321 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN86556.1| papaver rhoeas pollen S [Papaver rhoeas]               76   6e-11
emb|CAN86557.1| papaver rhoeas pollen S [Papaver rhoeas]               62   1e-06

>emb|CAN86556.1| papaver rhoeas pollen S [Papaver rhoeas]
          Length = 192

 Score = 76.3 bits (186), Expect = 6e-11
 Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
 Frame = -2

Query: 732 RSGLVVKLFWLCSLLIRITGGTATIWLSHRVFSGYTTSSVILILGITSSLAIYTGGIILY 553
           RSG VV LF     L  + G +  I     +F+   T   ++IL +  +L+I  GG I  
Sbjct: 3   RSGSVVTLFQFVGGLCTLLGVSVAI---KAIFAQDYTLKDLIILIVLVALSIILGGPITL 59

Query: 552 K--QLLTEFVKRQQGREERRWFVVVCIMGLCEGFLDDNTILPFIIISIVSMFTICILTNG 379
              +LL   + R    E+++W V      +C+  L    +LP  I S +S   IC++  G
Sbjct: 60  TCVKLLGLVLHRLSFSEDQKWVVAFGTAAICDVLLVPKNMLPMTIFSFLSSIMICVVAVG 119

Query: 378 WDYDRTGVSDGLAVTYALRMVLFLTNSEPPLQLITCVLTLAFVVTSKFTEPPVE 217
           WD DR+G+++G  V +   ++++L   +    L+ C   L   V +KFTE   E
Sbjct: 120 WDCDRSGMTEGFLVGFGKLLLVYLIKQDFTFSLL-CGSVLCLAVVAKFTEGKAE 172



 Score = 63.2 bits (152), Expect = 5e-07
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
 Frame = -2

Query: 1044 IGKNTNSSKIVPLLSICMLCVVSLGWDRDHSGLTEGILIASGKWFIISTMAMKLEQSAMC 865
            + KN     I   LS  M+CVV++GWD D SG+TEG L+  GK  ++  +      S +C
Sbjct: 95   VPKNMLPMTIFSFLSSIMICVVAVGWDCDRSGMTEGFLVGFGKLLLVYLIKQDFTFSLLC 154

Query: 864  GIVLAVSIISLFT-----SVGEPLRDGTDDSPPL 778
            G VL +++++ FT     +   P   G  DSP L
Sbjct: 155  GSVLCLAVVAKFTEGKAEATPNPNLAGKADSPHL 188


>emb|CAN86557.1| papaver rhoeas pollen S [Papaver rhoeas]
          Length = 193

 Score = 61.6 bits (148), Expect = 1e-06
 Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
 Frame = -2

Query: 1026 SSKIVPLLSIC-----MLCVVSLGWDRDHSGLTEGILIASGKWFIISTMAMKLEQSAMCG 862
            ++ + P+ SIC     M+CVV+ GWDRD SG+TEG LI  GK  +++ +      S M G
Sbjct: 96   TTNMTPVTSICFLSSIMICVVAAGWDRDRSGMTEGFLIGFGKLLLVNLIREDCTASVMYG 155

Query: 861  IVLAVSIISLFTSVGEPLRDGTDDSPPL 778
             VL ++I++ FT   E     T  +PP+
Sbjct: 156  SVLFLAIVAKFT---ENAVGATPLNPPI 180


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