BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00005497
         (2007 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010278175.1| PREDICTED: DNA-directed RNA polymerase I sub...   888   0.0  
ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I sub...   858   0.0  
ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I sub...   858   0.0  
ref|XP_012849697.1| PREDICTED: DNA-directed RNA polymerase I sub...   838   0.0  
ref|XP_011087223.1| PREDICTED: DNA-directed RNA polymerase I sub...   837   0.0  
gb|KJB73178.1| hypothetical protein B456_011G220100 [Gossypium r...   837   0.0  
ref|XP_012455618.1| PREDICTED: DNA-directed RNA polymerase I sub...   837   0.0  
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...   835   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   835   0.0  
ref|XP_010918457.1| PREDICTED: DNA-directed RNA polymerase I sub...   833   0.0  
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...   833   0.0  
gb|KCW65882.1| hypothetical protein EUGRSUZ_G03213 [Eucalyptus g...   830   0.0  
ref|XP_010067710.1| PREDICTED: probable DNA-directed RNA polymer...   830   0.0  
gb|KHN35264.1| DNA-directed RNA polymerase I subunit RPA2 [Glyci...   827   0.0  
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...   827   0.0  
ref|XP_009414083.1| PREDICTED: DNA-directed RNA polymerase I sub...   826   0.0  
ref|XP_008806649.1| PREDICTED: probable DNA-directed RNA polymer...   825   0.0  
ref|XP_009355260.1| PREDICTED: DNA-directed RNA polymerase I sub...   825   0.0  
ref|XP_008445376.1| PREDICTED: DNA-directed RNA polymerase I sub...   823   0.0  
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...   822   0.0  

>ref|XP_010278175.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Nelumbo
            nucifera]
          Length = 1350

 Score =  888 bits (2294), Expect = 0.0
 Identities = 438/636 (68%), Positives = 525/636 (82%), Gaps = 2/636 (0%)
 Frame = -2

Query: 1904 KKEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFPQ 1725
            K ++E+LRELFKPHI+SFDY +  GLE +L++IKPVE+V+  T   LRIWF   +L  PQ
Sbjct: 8    KHDYESLRELFKPHIDSFDYFVDAGLETMLMHIKPVEIVDSFTKTKLRIWFGKSELYPPQ 67

Query: 1724 KG--PKGRLDQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKRC 1551
            K    K   D + P+ECRQA ISYSG+  + VCFQY+ G V R   GFG +PIML SK C
Sbjct: 68   KERISKSIRDPLLPFECRQAGISYSGKFMVDVCFQYNNGVVVREKFGFGQLPIMLKSKVC 127

Query: 1550 NLRDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGYT 1371
            +LR ADP KLVS+KEEATEMGGYFIL GLERLVR++IM KRN+P+++ RNSFRE+++GYT
Sbjct: 128  HLRGADPQKLVSYKEEATEMGGYFILNGLERLVRLLIMPKRNYPMSMVRNSFRERREGYT 187

Query: 1370 DKAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIYV 1191
            DKAVVIRCVRED SA+T++LY+LQNGSARLGFW+ G+E+LLPVG++LKAL+DT+DHEIYV
Sbjct: 188  DKAVVIRCVREDQSAVTVKLYHLQNGSARLGFWIRGKEYLLPVGIVLKALIDTSDHEIYV 247

Query: 1190 SLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGLE 1011
            SLTC H+EV+QK KG VGTQLVGERVKIILDEVR L+L T  QC+ ++GE F+ +M GLE
Sbjct: 248  SLTC-HSEVNQKAKGTVGTQLVGERVKIILDEVRDLSLFTHLQCIQHIGEYFQAIMDGLE 306

Query: 1010 TESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLL 831
            TES S++G+ VL+DY+F+HL+NNHDKFNLLIFMLQKLF+ VDQT  PDN D LQN EVLL
Sbjct: 307  TESHSVVGEVVLKDYIFVHLDNNHDKFNLLIFMLQKLFSLVDQTTVPDNPDTLQNQEVLL 366

Query: 830  PGHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAIE 651
            PGHLIT+YLK++              E +    S +F  + +VKKV++K   KS+G A+E
Sbjct: 367  PGHLITIYLKEKLQDWLLKGRRLLYDEIKNKGKSSEFLSLAHVKKVLDKNSPKSIGLALE 426

Query: 650  NLLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLP 471
            N+L  G L +Q+GLDL Q++G S+QAERLNFLRF+SHFR+VHRGA+FAGLR+TSVRKLLP
Sbjct: 427  NMLKTGRLVTQTGLDLQQKEGMSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLP 486

Query: 470  ESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIP 291
            E+WGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDS+G VKDF KIR SI+SVL G+GM+P
Sbjct: 487  ETWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSHGNVKDFFKIRMSILSVLIGVGMMP 546

Query: 290  SLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPL 111
            SLPKLVRAGPPEV+ VLLDG VVGSISS  VE AV H+RRLKLS  SGIP+DLE+GYVPL
Sbjct: 547  SLPKLVRAGPPEVLSVLLDGRVVGSISSTEVENAVAHLRRLKLSACSGIPNDLEVGYVPL 606

Query: 110  TMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            TMGGAYPGLYLFTSPSRF RPVRNIS+ SEE Q+IE
Sbjct: 607  TMGGAYPGLYLFTSPSRFARPVRNISVSSEEGQDIE 642


>ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X2
            [Vitis vinifera] gi|731414307|ref|XP_010659084.1|
            PREDICTED: DNA-directed RNA polymerase I subunit RPA2
            isoform X2 [Vitis vinifera]
          Length = 1169

 Score =  858 bits (2217), Expect = 0.0
 Identities = 423/638 (66%), Positives = 514/638 (80%), Gaps = 2/638 (0%)
 Frame = -2

Query: 1910 TQKKEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLF 1731
            T   ++E LRELF+ HI+SFD+L+  GLE +L+++KPVEVV+  T Q LRIWF   +L  
Sbjct: 3    TAGPDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWFGQPELYP 62

Query: 1730 PQKGPKGRL--DQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSK 1557
            PQK    R   D +YP+ECRQAKISYSG+L   VCFQY  G   R     G  PIML SK
Sbjct: 63   PQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSK 122

Query: 1556 RCNLRDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDG 1377
             C+LR ADP KLVS KEE++EMGGYFIL GLER+VR++I+ KRN+P+++ RNSFR++++G
Sbjct: 123  LCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREG 182

Query: 1376 YTDKAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEI 1197
            YTDKAVVIRCVRED SA+T++LYYL+NGSARLGFW+ GRE+LLPVGV+LKAL+DT DHEI
Sbjct: 183  YTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEI 242

Query: 1196 YVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGG 1017
            Y SLTCC++E ++ GKG VGTQLVGERVKIILDEVR L+L T+ QCL ++GE F+ VM G
Sbjct: 243  YESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDG 302

Query: 1016 LETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEV 837
            LE ES SI+ D VLR+Y+F+HL+NN+DKFNLLIFM+QKLF+ +DQT  PDN D LQN EV
Sbjct: 303  LENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEV 362

Query: 836  LLPGHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSA 657
            LLPGHLIT+YLK++              E  +   +F+F  + +VKKVM+K PS+ +  A
Sbjct: 363  LLPGHLITIYLKEKLQEWLYKARRLLQDEINKRK-NFEFSSLAHVKKVMDKNPSRQISLA 421

Query: 656  IENLLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKL 477
            +EN+L  G L +QSGLDL QR G ++QAERLNFLRF+SHFR+VHRGA+FAGLR+TSVRKL
Sbjct: 422  VENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 481

Query: 476  LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGM 297
            LPE+WGFLCPVHTPDGEPCGLLNH+ STCRITSYFDS G  +DF KIR SI+SVL GIGM
Sbjct: 482  LPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGM 541

Query: 296  IPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYV 117
             P+LPKLV+AGPPEV+ V+LDG VVGSI S+ VE AV H+RRLK+S  S IPDDLE+GY+
Sbjct: 542  TPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYI 601

Query: 116  PLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            PL+MGGAYPGLYLFTSPSRFVRPVRNISIPSEE  +IE
Sbjct: 602  PLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIE 639


>ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
            [Vitis vinifera]
          Length = 1178

 Score =  858 bits (2217), Expect = 0.0
 Identities = 423/638 (66%), Positives = 514/638 (80%), Gaps = 2/638 (0%)
 Frame = -2

Query: 1910 TQKKEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLF 1731
            T   ++E LRELF+ HI+SFD+L+  GLE +L+++KPVEVV+  T Q LRIWF   +L  
Sbjct: 12   TAGPDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWFGQPELYP 71

Query: 1730 PQKGPKGRL--DQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSK 1557
            PQK    R   D +YP+ECRQAKISYSG+L   VCFQY  G   R     G  PIML SK
Sbjct: 72   PQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSK 131

Query: 1556 RCNLRDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDG 1377
             C+LR ADP KLVS KEE++EMGGYFIL GLER+VR++I+ KRN+P+++ RNSFR++++G
Sbjct: 132  LCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREG 191

Query: 1376 YTDKAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEI 1197
            YTDKAVVIRCVRED SA+T++LYYL+NGSARLGFW+ GRE+LLPVGV+LKAL+DT DHEI
Sbjct: 192  YTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEI 251

Query: 1196 YVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGG 1017
            Y SLTCC++E ++ GKG VGTQLVGERVKIILDEVR L+L T+ QCL ++GE F+ VM G
Sbjct: 252  YESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDG 311

Query: 1016 LETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEV 837
            LE ES SI+ D VLR+Y+F+HL+NN+DKFNLLIFM+QKLF+ +DQT  PDN D LQN EV
Sbjct: 312  LENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEV 371

Query: 836  LLPGHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSA 657
            LLPGHLIT+YLK++              E  +   +F+F  + +VKKVM+K PS+ +  A
Sbjct: 372  LLPGHLITIYLKEKLQEWLYKARRLLQDEINKRK-NFEFSSLAHVKKVMDKNPSRQISLA 430

Query: 656  IENLLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKL 477
            +EN+L  G L +QSGLDL QR G ++QAERLNFLRF+SHFR+VHRGA+FAGLR+TSVRKL
Sbjct: 431  VENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 490

Query: 476  LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGM 297
            LPE+WGFLCPVHTPDGEPCGLLNH+ STCRITSYFDS G  +DF KIR SI+SVL GIGM
Sbjct: 491  LPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGM 550

Query: 296  IPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYV 117
             P+LPKLV+AGPPEV+ V+LDG VVGSI S+ VE AV H+RRLK+S  S IPDDLE+GY+
Sbjct: 551  TPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYI 610

Query: 116  PLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            PL+MGGAYPGLYLFTSPSRFVRPVRNISIPSEE  +IE
Sbjct: 611  PLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIE 648


>ref|XP_012849697.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa2 [Erythranthe
            guttatus]
          Length = 1200

 Score =  838 bits (2166), Expect = 0.0
 Identities = 409/637 (64%), Positives = 512/637 (80%), Gaps = 2/637 (0%)
 Frame = -2

Query: 1907 QKKEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFP 1728
            ++K++E LRE+FK HI+SFDY++  G EK+++ +KPVEVV+ ST Q LRIWF+N ++  P
Sbjct: 30   KEKDYEALREIFKHHIDSFDYMVEHGFEKMMLGLKPVEVVDSSTKQKLRIWFENPEIFPP 89

Query: 1727 QK--GPKGRLDQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKR 1554
            QK    K   D +YP+ECRQA ++Y+G+  + + +QYD+G V R  +  G  PIML SK 
Sbjct: 90   QKDRATKTIADPLYPFECRQANLTYAGKFMVDIKYQYDEGVVIRDRVSLGQFPIMLKSKY 149

Query: 1553 CNLRDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGY 1374
            C+L+DA+  KLVS KEE +EMGGYFIL GLER+VR++I+ KRN+P +V RNSFRE+++GY
Sbjct: 150  CHLKDANTKKLVSLKEEPSEMGGYFILNGLERVVRLLILPKRNYPTSVVRNSFRERREGY 209

Query: 1373 TDKAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIY 1194
            TDKAVVIRCVRED SA+T++LYYL NGSARLG W+ GRE+LLPVG+ILKAL +T DHEIY
Sbjct: 210  TDKAVVIRCVREDQSAVTVKLYYLNNGSARLGLWIQGREYLLPVGIILKALTETTDHEIY 269

Query: 1193 VSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGL 1014
            VSLTCC+NE + + KG VGTQLVGER KIILDE+++L+L T+ QCL ++GE F+P+M GL
Sbjct: 270  VSLTCCYNEKYDRVKGSVGTQLVGERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMVGL 329

Query: 1013 ETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVL 834
            E E  S+I D VLRDYVF+HL+ N DKFNLLIFMLQKLF+ VDQT  PDNTD+LQNHEVL
Sbjct: 330  EKEGYSVIADAVLRDYVFVHLDENIDKFNLLIFMLQKLFSLVDQTSVPDNTDSLQNHEVL 389

Query: 833  LPGHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAI 654
            LPGHLIT+Y+K++                     +F+   + +VKKV++K   K +G+AI
Sbjct: 390  LPGHLITIYVKEKLQDFLLKAKQALQDVVDNKKKNFEMSSLADVKKVIDKAFPKQIGAAI 449

Query: 653  ENLLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLL 474
            ENLL  G L +++GLDLPQ+ G ++ AERLNFLRF+SHFR+VHRG+ FAGLR+TSVRKLL
Sbjct: 450  ENLLKTGNLVTKTGLDLPQKSGMTVLAERLNFLRFISHFRAVHRGSLFAGLRTTSVRKLL 509

Query: 473  PESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMI 294
            PESWGFLCPVHTPDGEPCGLLNH+TS+CRITS++DS G VKDFL+IRKSI  VL  IGMI
Sbjct: 510  PESWGFLCPVHTPDGEPCGLLNHMTSSCRITSHYDSEGQVKDFLEIRKSISRVLVSIGMI 569

Query: 293  PSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVP 114
            PSLPKLV+AGPPEV+ +LLDG VVGSI+S+IV KAV H+RRLK+S  S IP+DLE+GY+P
Sbjct: 570  PSLPKLVQAGPPEVLPILLDGRVVGSIASDIVGKAVTHLRRLKVSATSAIPEDLEVGYIP 629

Query: 113  LTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            L+MGGAYPGLYLFTS SRFVRPVRN  IP  E+ NIE
Sbjct: 630  LSMGGAYPGLYLFTSASRFVRPVRNRLIPPGESNNIE 666


>ref|XP_011087223.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Sesamum
            indicum]
          Length = 1196

 Score =  837 bits (2162), Expect = 0.0
 Identities = 407/638 (63%), Positives = 515/638 (80%), Gaps = 3/638 (0%)
 Frame = -2

Query: 1907 QKKEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFP 1728
            ++K++E LRELFK HI+SFD+++  G+E++L++IKPVEV +  +   LRIWF+N ++  P
Sbjct: 27   EEKDYEALRELFKHHIDSFDHMVEHGIERMLLSIKPVEVFDSFSNLKLRIWFENPEIYPP 86

Query: 1727 QKGPKGRL--DQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKR 1554
            QK    R   D +YP+ECRQAK++Y+G   I V FQYD G   R  + FG  P+ML SK 
Sbjct: 87   QKERFSRTMADALYPFECRQAKLTYAGRFMIDVKFQYDDGVSVREKINFGQFPVMLKSKL 146

Query: 1553 CNLRDA-DPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDG 1377
            C+LR A DP KLV HKEE +EMGGYFI+ GLER++R++I+ KRN+P+++ RNSFRE+++G
Sbjct: 147  CHLRAANDPKKLVRHKEEPSEMGGYFIMNGLERVIRLLILPKRNYPMSMVRNSFRERREG 206

Query: 1376 YTDKAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEI 1197
            Y+DKAVVIRCVRED SA+T++LYYL NGSARLGFW+ GRE+LLPVG+I+KAL+DT DHEI
Sbjct: 207  YSDKAVVIRCVREDQSAVTVKLYYLNNGSARLGFWIQGREYLLPVGIIMKALIDTTDHEI 266

Query: 1196 YVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGG 1017
            YVSLTCC+NE + + KG VGTQLVGER KIILDE+++++L T+ QCL ++GE F+P+M G
Sbjct: 267  YVSLTCCYNEKYDRVKGSVGTQLVGERAKIILDELQNMSLYTRAQCLQHIGEHFQPLMAG 326

Query: 1016 LETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEV 837
            LE ES S++ D VLRDY+F+HL++N DKFNLLIFMLQKLF+ VDQT  PDN D+LQN EV
Sbjct: 327  LEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEV 386

Query: 836  LLPGHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSA 657
            LLPGHLIT+YLK++              E    +  F+   + +VKKV+ K   + +G+A
Sbjct: 387  LLPGHLITIYLKEKLQDWLLKAKRTLQDEVDNRTKKFELSSLADVKKVIEKNTPRQIGAA 446

Query: 656  IENLLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKL 477
            IENLL  G L +QSGLDL QR G ++QAERLNFLRF+SHFR+VHRGA+FAGLR+TSVRKL
Sbjct: 447  IENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 506

Query: 476  LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGM 297
            LPESWGFLCPVHTPDGEPCGLLN++TS+CRITSY+DS G VKDFL++RKSI+ VL  IGM
Sbjct: 507  LPESWGFLCPVHTPDGEPCGLLNNMTSSCRITSYYDSKGKVKDFLEVRKSILKVLVSIGM 566

Query: 296  IPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYV 117
             PSLPKLV+AGPPEV+ VLLDG VVGSI+S+I+EKAV H+RRLK++    IP+DLE+GY+
Sbjct: 567  TPSLPKLVQAGPPEVLPVLLDGRVVGSIASDIIEKAVCHLRRLKVAATFAIPEDLEVGYI 626

Query: 116  PLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            PL+MGGAYPGL+LFTS SRFVRPVRNI IP EE  NIE
Sbjct: 627  PLSMGGAYPGLHLFTSASRFVRPVRNILIPPEEGNNIE 664


>gb|KJB73178.1| hypothetical protein B456_011G220100 [Gossypium raimondii]
          Length = 1107

 Score =  837 bits (2161), Expect = 0.0
 Identities = 405/635 (63%), Positives = 511/635 (80%), Gaps = 2/635 (0%)
 Frame = -2

Query: 1901 KEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFPQK 1722
            KE E L+ELFK HIESFDY+I EGLE +L  +KPV++ + ++ +TLRIW D+ ++  PQK
Sbjct: 16   KELEELKELFKHHIESFDYMIDEGLEIMLKRVKPVQIFDPNSTKTLRIWLDHPEIFPPQK 75

Query: 1721 --GPKGRLDQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKRCN 1548
                K     + P+ECRQAKISY+G L + VCFQ++ G V R  + FG+ PIML SKRC 
Sbjct: 76   DRSSKTSAGALLPFECRQAKISYTGSLHMDVCFQWNGGVVIREKVNFGEFPIMLRSKRCY 135

Query: 1547 LRDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGYTD 1368
            L+ A+P KLV+ KEEA EMGGYFIL GLER+VR +I+ KRN+P+++ERNSFRE+++GYTD
Sbjct: 136  LQGANPEKLVACKEEAREMGGYFILNGLERVVRALILPKRNYPMSLERNSFRERREGYTD 195

Query: 1367 KAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIYVS 1188
            KAVVIRCVR+D+S++T++LYYL+NGSARLGFW+ G+E++LPVG++LKAL+DTNDHEIY  
Sbjct: 196  KAVVIRCVRDDLSSVTVKLYYLRNGSARLGFWIQGKEYMLPVGIVLKALIDTNDHEIYTK 255

Query: 1187 LTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGLET 1008
            LTCC+NE     KG VG+QLVGER KIILDEVR LAL T+ QCL ++GE F+PVM G+ET
Sbjct: 256  LTCCYNEKDGNIKGAVGSQLVGERAKIILDEVRHLALFTKDQCLLHIGEHFQPVMEGMET 315

Query: 1007 ESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLP 828
            ES S + D VLR+ +F+HL +N+DKFNLLIFM+QKLF+ VDQT APDN+D+LQN E+LLP
Sbjct: 316  ESYSSVADAVLRNRIFVHLNDNNDKFNLLIFMVQKLFSLVDQTSAPDNSDSLQNQEILLP 375

Query: 827  GHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAIEN 648
            GHLIT+YLK++              +   NS +FDF  +++VKKVM+K  SK +G+AIEN
Sbjct: 376  GHLITIYLKEKLEDWLRKGKKLVEDKINNNSQNFDFCSLKDVKKVMDKNSSKQIGTAIEN 435

Query: 647  LLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPE 468
            LL  G L +Q+GLDL QR GF++QAERLN+LRF+S FRSVHRGA+FAGLR+TSVRKLLPE
Sbjct: 436  LLKTGRLITQTGLDLQQRAGFTVQAERLNYLRFISFFRSVHRGASFAGLRTTSVRKLLPE 495

Query: 467  SWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPS 288
            SWGFLCPVHTPDGEPCGLLNH+T TCRITSY++S G ++DF KIR SI+ VL G+GM  S
Sbjct: 496  SWGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSQGNIRDFFKIRMSILDVLVGVGMTTS 555

Query: 287  LPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLT 108
             PK+  AGPP  + VLLDGCV+GS+SS   +K V H+RRLK+S  S IPDDLE+GYVPL+
Sbjct: 556  WPKVDHAGPPRSLPVLLDGCVIGSLSSGEADKVVAHLRRLKVSAASVIPDDLEVGYVPLS 615

Query: 107  MGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            +GG YPGLYLFTSPSRF+RPVRNISIPS + ++IE
Sbjct: 616  LGGTYPGLYLFTSPSRFIRPVRNISIPSSDGKDIE 650


>ref|XP_012455618.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Gossypium
            raimondii] gi|763806239|gb|KJB73177.1| hypothetical
            protein B456_011G220100 [Gossypium raimondii]
          Length = 1178

 Score =  837 bits (2161), Expect = 0.0
 Identities = 405/635 (63%), Positives = 511/635 (80%), Gaps = 2/635 (0%)
 Frame = -2

Query: 1901 KEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFPQK 1722
            KE E L+ELFK HIESFDY+I EGLE +L  +KPV++ + ++ +TLRIW D+ ++  PQK
Sbjct: 16   KELEELKELFKHHIESFDYMIDEGLEIMLKRVKPVQIFDPNSTKTLRIWLDHPEIFPPQK 75

Query: 1721 --GPKGRLDQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKRCN 1548
                K     + P+ECRQAKISY+G L + VCFQ++ G V R  + FG+ PIML SKRC 
Sbjct: 76   DRSSKTSAGALLPFECRQAKISYTGSLHMDVCFQWNGGVVIREKVNFGEFPIMLRSKRCY 135

Query: 1547 LRDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGYTD 1368
            L+ A+P KLV+ KEEA EMGGYFIL GLER+VR +I+ KRN+P+++ERNSFRE+++GYTD
Sbjct: 136  LQGANPEKLVACKEEAREMGGYFILNGLERVVRALILPKRNYPMSLERNSFRERREGYTD 195

Query: 1367 KAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIYVS 1188
            KAVVIRCVR+D+S++T++LYYL+NGSARLGFW+ G+E++LPVG++LKAL+DTNDHEIY  
Sbjct: 196  KAVVIRCVRDDLSSVTVKLYYLRNGSARLGFWIQGKEYMLPVGIVLKALIDTNDHEIYTK 255

Query: 1187 LTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGLET 1008
            LTCC+NE     KG VG+QLVGER KIILDEVR LAL T+ QCL ++GE F+PVM G+ET
Sbjct: 256  LTCCYNEKDGNIKGAVGSQLVGERAKIILDEVRHLALFTKDQCLLHIGEHFQPVMEGMET 315

Query: 1007 ESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLP 828
            ES S + D VLR+ +F+HL +N+DKFNLLIFM+QKLF+ VDQT APDN+D+LQN E+LLP
Sbjct: 316  ESYSSVADAVLRNRIFVHLNDNNDKFNLLIFMVQKLFSLVDQTSAPDNSDSLQNQEILLP 375

Query: 827  GHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAIEN 648
            GHLIT+YLK++              +   NS +FDF  +++VKKVM+K  SK +G+AIEN
Sbjct: 376  GHLITIYLKEKLEDWLRKGKKLVEDKINNNSQNFDFCSLKDVKKVMDKNSSKQIGTAIEN 435

Query: 647  LLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPE 468
            LL  G L +Q+GLDL QR GF++QAERLN+LRF+S FRSVHRGA+FAGLR+TSVRKLLPE
Sbjct: 436  LLKTGRLITQTGLDLQQRAGFTVQAERLNYLRFISFFRSVHRGASFAGLRTTSVRKLLPE 495

Query: 467  SWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPS 288
            SWGFLCPVHTPDGEPCGLLNH+T TCRITSY++S G ++DF KIR SI+ VL G+GM  S
Sbjct: 496  SWGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSQGNIRDFFKIRMSILDVLVGVGMTTS 555

Query: 287  LPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLT 108
             PK+  AGPP  + VLLDGCV+GS+SS   +K V H+RRLK+S  S IPDDLE+GYVPL+
Sbjct: 556  WPKVDHAGPPRSLPVLLDGCVIGSLSSGEADKVVAHLRRLKVSAASVIPDDLEVGYVPLS 615

Query: 107  MGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            +GG YPGLYLFTSPSRF+RPVRNISIPS + ++IE
Sbjct: 616  LGGTYPGLYLFTSPSRFIRPVRNISIPSSDGKDIE 650


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
            [Glycine max]
          Length = 1151

 Score =  835 bits (2156), Expect = 0.0
 Identities = 410/634 (64%), Positives = 504/634 (79%), Gaps = 2/634 (0%)
 Frame = -2

Query: 1898 EFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFPQKG 1719
            +FE LRELFK HIESFDY++  GL+ +L +IKPVEV +  T   LRIW DN  L  PQK 
Sbjct: 10   DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 1718 PKGRL--DQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKRCNL 1545
               R   + + P+ECRQAKISYSG++ I VCFQY+ G + R ++ FG  PIML SK CNL
Sbjct: 70   RISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCNL 129

Query: 1544 RDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGYTDK 1365
            R ADP KLVS+KEEA+EMGGYFIL GLER+VR++I+ KRN+P+++ RNSF ++++GYTDK
Sbjct: 130  RGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDK 189

Query: 1364 AVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIYVSL 1185
            AVVIRCVR D S+L++RLYYL+NGSARLGFWL GRE+LLPVG+ILKAL+DT D EIYV+L
Sbjct: 190  AVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNL 249

Query: 1184 TCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGLETE 1005
            T C+NE ++KGKG VGTQLVGER KIILDE+R L+L T+ QCL Y+GE F+PVM  L+ +
Sbjct: 250  TSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKND 309

Query: 1004 SGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPG 825
            S  I+ D VL+D + +HL+NN DKFNLLIFMLQKLF+ +DQT  PDN D+LQNHEVLLPG
Sbjct: 310  SYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG 369

Query: 824  HLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAIENL 645
            HLITLYLK++              E  + S  FDF  +  VKKVM+K   K V +A+EN+
Sbjct: 370  HLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENM 429

Query: 644  LIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPES 465
            L  G L +Q+GLDL QR G+++QAERLNFLRF+SHFR+VHRGA+FAGLR+T+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 464  WGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPSL 285
            WGFLCPVHTPDGEPCGLLNH+T T RITS+FDS G +KD+ KI+ SI++VL  +GM PSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSL 549

Query: 284  PKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTM 105
            PK+   GPPE + VLLDGCVVG I+S+ VEK V HIR LK+S  + IPDD+E+GYVPL+M
Sbjct: 550  PKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSM 609

Query: 104  GGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            GGAYPGLYL TSPSRFVRPVRNISI S+ ++NIE
Sbjct: 610  GGAYPGLYLCTSPSRFVRPVRNISIASDGSENIE 643


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max] gi|947071775|gb|KRH20666.1| hypothetical
            protein GLYMA_13G192600 [Glycine max]
          Length = 1175

 Score =  835 bits (2156), Expect = 0.0
 Identities = 410/634 (64%), Positives = 504/634 (79%), Gaps = 2/634 (0%)
 Frame = -2

Query: 1898 EFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFPQKG 1719
            +FE LRELFK HIESFDY++  GL+ +L +IKPVEV +  T   LRIW DN  L  PQK 
Sbjct: 10   DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 1718 PKGRL--DQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKRCNL 1545
               R   + + P+ECRQAKISYSG++ I VCFQY+ G + R ++ FG  PIML SK CNL
Sbjct: 70   RISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCNL 129

Query: 1544 RDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGYTDK 1365
            R ADP KLVS+KEEA+EMGGYFIL GLER+VR++I+ KRN+P+++ RNSF ++++GYTDK
Sbjct: 130  RGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDK 189

Query: 1364 AVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIYVSL 1185
            AVVIRCVR D S+L++RLYYL+NGSARLGFWL GRE+LLPVG+ILKAL+DT D EIYV+L
Sbjct: 190  AVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNL 249

Query: 1184 TCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGLETE 1005
            T C+NE ++KGKG VGTQLVGER KIILDE+R L+L T+ QCL Y+GE F+PVM  L+ +
Sbjct: 250  TSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKND 309

Query: 1004 SGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPG 825
            S  I+ D VL+D + +HL+NN DKFNLLIFMLQKLF+ +DQT  PDN D+LQNHEVLLPG
Sbjct: 310  SYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG 369

Query: 824  HLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAIENL 645
            HLITLYLK++              E  + S  FDF  +  VKKVM+K   K V +A+EN+
Sbjct: 370  HLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENM 429

Query: 644  LIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPES 465
            L  G L +Q+GLDL QR G+++QAERLNFLRF+SHFR+VHRGA+FAGLR+T+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 464  WGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPSL 285
            WGFLCPVHTPDGEPCGLLNH+T T RITS+FDS G +KD+ KI+ SI++VL  +GM PSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSL 549

Query: 284  PKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTM 105
            PK+   GPPE + VLLDGCVVG I+S+ VEK V HIR LK+S  + IPDD+E+GYVPL+M
Sbjct: 550  PKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSM 609

Query: 104  GGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            GGAYPGLYL TSPSRFVRPVRNISI S+ ++NIE
Sbjct: 610  GGAYPGLYLCTSPSRFVRPVRNISIASDGSENIE 643


>ref|XP_010918457.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
            [Elaeis guineensis]
          Length = 1175

 Score =  833 bits (2152), Expect = 0.0
 Identities = 403/646 (62%), Positives = 508/646 (78%), Gaps = 6/646 (0%)
 Frame = -2

Query: 1922 MGVNTQKKEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNH 1743
            M     K+++E LRELF+PHI+SF+Y + EGLEK L++I+PVE+ + S G  LRI+F+N 
Sbjct: 1    MASKATKQDYEALRELFRPHIDSFNYFLDEGLEKALLSIRPVEISDPSVGGKLRIYFENP 60

Query: 1742 KLLFP------QKGPKGRLDQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGD 1581
            ++  P       K   G  + +YP+ECRQA  +Y GE K+++C QY+     ++ M FG 
Sbjct: 61   QVFHPLREGRITKSKGGITEALYPHECRQAGTTYKGEFKVTICLQYNDQQPVQIPMNFGH 120

Query: 1580 VPIMLMSKRCNLRDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERN 1401
            +PIML SK C+L+DADP KL+ HKEEATEMGGYFI  GLERL R++I+ KRN+P+ + R+
Sbjct: 121  LPIMLRSKLCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPMGMIRS 180

Query: 1400 SFREKQDGYTDKAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKAL 1221
            SFR +  GY+DKAVV+RCVRED S++T++LYYLQNGSARLGFW+ GREFLLP+G++LKAL
Sbjct: 181  SFRSRGVGYSDKAVVMRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPIGIVLKAL 240

Query: 1220 VDTNDHEIYVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGE 1041
            +DT+D EI+VSLTCC+N+ +QK +G VG+Q++GER +IIL+EVR L+LLT  QCL ++GE
Sbjct: 241  IDTSDREIFVSLTCCYNDRYQKQRGAVGSQIIGERAQIILEEVRDLSLLTSSQCLKHIGE 300

Query: 1040 SFRPVMGGLETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNT 861
             FRP M G E ES + + + VLRDYVF+HL  NHDKFNLLIFMLQKL+A VDQTVAPDN 
Sbjct: 301  YFRPAMDGFENESHTTVAEAVLRDYVFVHLTTNHDKFNLLIFMLQKLYALVDQTVAPDNP 360

Query: 860  DALQNHEVLLPGHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKY 681
            DALQN E+LLPGHLIT+Y+K++              E  +N    DF IV  V K +N+ 
Sbjct: 361  DALQNQEILLPGHLITIYVKEKFQDWLNKSRRQLLDELGKNEKKLDFSIVHQVVKFLNR- 419

Query: 680  PSKSVGSAIENLLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGL 501
             + S+G +IE+++ +G L + SGLDLPQR+G +IQAERLNF RF+SHFRSVHRGA+F  +
Sbjct: 420  NAASLGRSIESMIKVGRLATSSGLDLPQREGMTIQAERLNFYRFLSHFRSVHRGASFTKM 479

Query: 500  RSTSVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIV 321
            R TSVRKLLPESWGFLCPVHTPDGEPCGLLNH+TSTCRI+S++DS   VKDFLKIR SI+
Sbjct: 480  RITSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYDSERKVKDFLKIRMSIL 539

Query: 320  SVLTGIGMIPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIP 141
            +VL G+GM P LPKL RAGPPEV+ VLLDGCVVGSI+S+ VEKAV HIR LKLS  SGIP
Sbjct: 540  TVLVGVGMTPLLPKLERAGPPEVLHVLLDGCVVGSIASSEVEKAVAHIRSLKLSSLSGIP 599

Query: 140  DDLEIGYVPLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            DDLE+GYVPL++GG YPGLYLFTSPSRF+RPVRN+S  S+ N NIE
Sbjct: 600  DDLEVGYVPLSLGGTYPGLYLFTSPSRFIRPVRNVSHSSDNNLNIE 645


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
            gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
            isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  833 bits (2151), Expect = 0.0
 Identities = 405/641 (63%), Positives = 509/641 (79%), Gaps = 2/641 (0%)
 Frame = -2

Query: 1919 GVNTQKKEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHK 1740
            G  +  +E E L+ELFK HIESFDY+I EGL+ +L  +KPV++ + S+ +TLRIW D+ +
Sbjct: 10   GPFSDAEELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPE 69

Query: 1739 LLFPQK--GPKGRLDQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIML 1566
            +  PQK    K     +YP+ECRQAKISY+G   I VCFQ+D G V R  + FG+ PIML
Sbjct: 70   VYPPQKDRSSKTSAGALYPFECRQAKISYTGSFHIDVCFQWDGGVVVREKLNFGEFPIML 129

Query: 1565 MSKRCNLRDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREK 1386
             SKRC LR+ADP KLV+ KEE+ EMGGYFIL GLER+VR++I+ KRN+P+++ RNSFR++
Sbjct: 130  KSKRCYLREADPRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRDR 189

Query: 1385 QDGYTDKAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTND 1206
            ++GYTDKAVVIRCVR D+S++T++LYYL NGSARLGFW+ GRE++LPVG+ILKAL+DTND
Sbjct: 190  REGYTDKAVVIRCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGIILKALIDTND 249

Query: 1205 HEIYVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPV 1026
             EIY  LTCC+NE + +GKG VGTQLVGER KIILDEV+ LAL TQ+QCL ++GE F+P+
Sbjct: 250  REIYTKLTCCYNEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQHIGEHFQPI 309

Query: 1025 MGGLETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQN 846
            M G+E+ES S + D VLR+Y+F+HL++N+DKFNLLIFM+QKLF+ +DQT APDN+D+LQN
Sbjct: 310  MEGMESESYSTVADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSAPDNSDSLQN 369

Query: 845  HEVLLPGHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSV 666
             EVLLPGHLIT+YLK++                   S +FDF  +++VKKVM K     V
Sbjct: 370  QEVLLPGHLITIYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKVMEKNRPTQV 429

Query: 665  GSAIENLLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSV 486
             +AIENLL  G L +Q+GLDL QR GF++QAERLN+ RF+S FR VHRGA+FAGLR+TSV
Sbjct: 430  SAAIENLLKTGRLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGASFAGLRTTSV 489

Query: 485  RKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTG 306
            RKLLPESWGFLCPVHTPDGEPCGLLNH+T TCRITSY++S G ++DF KIR SI+ VL G
Sbjct: 490  RKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIRMSILDVLVG 549

Query: 305  IGMIPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEI 126
            +GM  S PK+  AGPP+V+ VLLDG VVGS+ S   EK V H+RRLKL+  S IPDDLE+
Sbjct: 550  VGMTTSWPKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVIPDDLEV 609

Query: 125  GYVPLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            GYVPL++GG YPGLYLFTSPSRFVRPVRNISIPS + ++IE
Sbjct: 610  GYVPLSLGGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIE 650


>gb|KCW65882.1| hypothetical protein EUGRSUZ_G03213 [Eucalyptus grandis]
          Length = 1082

 Score =  830 bits (2144), Expect = 0.0
 Identities = 406/634 (64%), Positives = 506/634 (79%), Gaps = 2/634 (0%)
 Frame = -2

Query: 1898 EFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFPQK- 1722
            ++  LRELF+ HIESFD+L+  GLE +L  IKPV++ + S+ +TL+IWF   ++  PQK 
Sbjct: 10   DYGALRELFRHHIESFDHLVDRGLETMLDKIKPVQIFDPSSDKTLKIWFAKPEVYQPQKE 69

Query: 1721 -GPKGRLDQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKRCNL 1545
               K   D + P+ECRQAK SY+G+  + + FQYD          FG +PIML SK C L
Sbjct: 70   GSSKTSHDALLPFECRQAKTSYAGKFVVHLYFQYDDKVAVHEKFNFGHLPIMLKSKLCYL 129

Query: 1544 RDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGYTDK 1365
              ADP KLVS KEE++EMGGYFIL GLER+VR++I+ KRN+P+++ RNSFR++++GYTDK
Sbjct: 130  NGADPQKLVSWKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTDK 189

Query: 1364 AVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIYVSL 1185
            AVVIRCVRED S++T++LYYLQNGSARLGFW+  RE+LLPVGV+LKAL+DTNDHEIY SL
Sbjct: 190  AVVIRCVREDQSSVTVKLYYLQNGSARLGFWIQAREYLLPVGVVLKALIDTNDHEIYSSL 249

Query: 1184 TCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGLETE 1005
            T C++E + +GKGVVG QLV ER KIILDE+R L L T++QCL ++GE F+PVM GLE E
Sbjct: 250  TSCYSEKYGRGKGVVGNQLVSERAKIILDELRDLTLFTRRQCLQHIGEHFQPVMDGLENE 309

Query: 1004 SGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPG 825
            S   + + VL+DY+F+HL NN+DKFNLLIFM+QKLF+ +DQT +PDN D+LQN EVLLPG
Sbjct: 310  SFISVANAVLQDYIFVHLNNNYDKFNLLIFMVQKLFSLIDQTSSPDNPDSLQNQEVLLPG 369

Query: 824  HLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAIENL 645
            HLIT+YLKD+              E +  + +FDF  + +VKKVM+K P + +GSAIEN+
Sbjct: 370  HLITIYLKDKLEDWLQKAKKLLQDELKNKAKNFDFSSLAHVKKVMDKNPGRQIGSAIENM 429

Query: 644  LIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPES 465
            L  G L +QSGLDL QR G+++QAERLNFLRF+SHFR+VHRGA+FAGLR+TSVRKLLPES
Sbjct: 430  LKTGRLVTQSGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 489

Query: 464  WGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPSL 285
            WGFLCPVHTPDGEPCGLLNH+T TCRITS+FDS G  +DF+KIR SI++VL GIGM PSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTCTCRITSFFDSKGNFRDFVKIRTSILNVLIGIGMTPSL 549

Query: 284  PKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTM 105
            PK+V+AGPP+V+ VLLDG VVGSI S  VEKAV ++RRLKLS  SGIPDDLE+GYVPL+ 
Sbjct: 550  PKIVQAGPPDVLSVLLDGRVVGSIPSAEVEKAVSYLRRLKLSTTSGIPDDLEVGYVPLSF 609

Query: 104  GGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            GGAYPGLYLFT+PSRF RPVRNIS P + +QNIE
Sbjct: 610  GGAYPGLYLFTNPSRFARPVRNISAPVDGSQNIE 643


>ref|XP_010067710.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2
            isoform X1 [Eucalyptus grandis]
            gi|629100116|gb|KCW65881.1| hypothetical protein
            EUGRSUZ_G03213 [Eucalyptus grandis]
          Length = 1173

 Score =  830 bits (2144), Expect = 0.0
 Identities = 406/634 (64%), Positives = 506/634 (79%), Gaps = 2/634 (0%)
 Frame = -2

Query: 1898 EFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFPQK- 1722
            ++  LRELF+ HIESFD+L+  GLE +L  IKPV++ + S+ +TL+IWF   ++  PQK 
Sbjct: 10   DYGALRELFRHHIESFDHLVDRGLETMLDKIKPVQIFDPSSDKTLKIWFAKPEVYQPQKE 69

Query: 1721 -GPKGRLDQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKRCNL 1545
               K   D + P+ECRQAK SY+G+  + + FQYD          FG +PIML SK C L
Sbjct: 70   GSSKTSHDALLPFECRQAKTSYAGKFVVHLYFQYDDKVAVHEKFNFGHLPIMLKSKLCYL 129

Query: 1544 RDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGYTDK 1365
              ADP KLVS KEE++EMGGYFIL GLER+VR++I+ KRN+P+++ RNSFR++++GYTDK
Sbjct: 130  NGADPQKLVSWKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTDK 189

Query: 1364 AVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIYVSL 1185
            AVVIRCVRED S++T++LYYLQNGSARLGFW+  RE+LLPVGV+LKAL+DTNDHEIY SL
Sbjct: 190  AVVIRCVREDQSSVTVKLYYLQNGSARLGFWIQAREYLLPVGVVLKALIDTNDHEIYSSL 249

Query: 1184 TCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGLETE 1005
            T C++E + +GKGVVG QLV ER KIILDE+R L L T++QCL ++GE F+PVM GLE E
Sbjct: 250  TSCYSEKYGRGKGVVGNQLVSERAKIILDELRDLTLFTRRQCLQHIGEHFQPVMDGLENE 309

Query: 1004 SGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPG 825
            S   + + VL+DY+F+HL NN+DKFNLLIFM+QKLF+ +DQT +PDN D+LQN EVLLPG
Sbjct: 310  SFISVANAVLQDYIFVHLNNNYDKFNLLIFMVQKLFSLIDQTSSPDNPDSLQNQEVLLPG 369

Query: 824  HLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAIENL 645
            HLIT+YLKD+              E +  + +FDF  + +VKKVM+K P + +GSAIEN+
Sbjct: 370  HLITIYLKDKLEDWLQKAKKLLQDELKNKAKNFDFSSLAHVKKVMDKNPGRQIGSAIENM 429

Query: 644  LIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPES 465
            L  G L +QSGLDL QR G+++QAERLNFLRF+SHFR+VHRGA+FAGLR+TSVRKLLPES
Sbjct: 430  LKTGRLVTQSGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 489

Query: 464  WGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPSL 285
            WGFLCPVHTPDGEPCGLLNH+T TCRITS+FDS G  +DF+KIR SI++VL GIGM PSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTCTCRITSFFDSKGNFRDFVKIRTSILNVLIGIGMTPSL 549

Query: 284  PKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTM 105
            PK+V+AGPP+V+ VLLDG VVGSI S  VEKAV ++RRLKLS  SGIPDDLE+GYVPL+ 
Sbjct: 550  PKIVQAGPPDVLSVLLDGRVVGSIPSAEVEKAVSYLRRLKLSTTSGIPDDLEVGYVPLSF 609

Query: 104  GGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            GGAYPGLYLFT+PSRF RPVRNIS P + +QNIE
Sbjct: 610  GGAYPGLYLFTNPSRFARPVRNISAPVDGSQNIE 643


>gb|KHN35264.1| DNA-directed RNA polymerase I subunit RPA2 [Glycine soja]
          Length = 1175

 Score =  827 bits (2137), Expect = 0.0
 Identities = 406/634 (64%), Positives = 501/634 (79%), Gaps = 2/634 (0%)
 Frame = -2

Query: 1898 EFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFPQKG 1719
            +FE LRELFK HIESFDY+   GLE +L +IKP+EV +  T   LRIW DN  L  PQK 
Sbjct: 10   DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 1718 PKGRL--DQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKRCNL 1545
               R   + + P+ECRQAKISY+G++ I VCFQY+ G + R ++ FG  PIML SK CNL
Sbjct: 70   RISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCNL 129

Query: 1544 RDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGYTDK 1365
            R ADP KLVS++EEA+EMGGYFIL GLER++R++I+ KRN P+++ RNSF ++++GYTDK
Sbjct: 130  RGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTDK 189

Query: 1364 AVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIYVSL 1185
            A+VIRCVR D S+L++RLYYL+NGSARLGFWL GRE+LLPVG+ILKAL+DT D EIYV+L
Sbjct: 190  AIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNL 249

Query: 1184 TCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGLETE 1005
            T C+NE ++KGKG VGTQLVGER KIILDE+R L+L T+ QCL Y+GE F+PV+  L+ +
Sbjct: 250  TSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKND 309

Query: 1004 SGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPG 825
            S  I+ + VL+D + +HL+NN DKFNLLIFMLQKLF+ +DQT  PDN D+LQNHEVLLPG
Sbjct: 310  SYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG 369

Query: 824  HLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAIENL 645
            HLITLYLK++              E  + S  FDF  +  VKKVM+K   K V +A+EN+
Sbjct: 370  HLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENM 429

Query: 644  LIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPES 465
            L  G L +Q+GLDL QR G+++QAERLNFLRFVSHFR+VHRGA+FAGLR+T+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 464  WGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPSL 285
            WGFLCPVHTPDGEPCGLLNH+T T RITS+FDS G VKD+ KI+ SI++VL  +GM PSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPSL 549

Query: 284  PKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTM 105
            PK+   GPPE + VLLDGCVVG I+S+  EK V HIR LK+S  + IPDD+E+GYVPL+M
Sbjct: 550  PKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLSM 609

Query: 104  GGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            GGAYPGLYL TSPSRFVRPVRNISIPS  ++NIE
Sbjct: 610  GGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIE 643


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max] gi|947055288|gb|KRH04741.1|
            hypothetical protein GLYMA_17G183400 [Glycine max]
          Length = 1175

 Score =  827 bits (2137), Expect = 0.0
 Identities = 406/634 (64%), Positives = 501/634 (79%), Gaps = 2/634 (0%)
 Frame = -2

Query: 1898 EFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFPQKG 1719
            +FE LRELFK HIESFDY+   GLE +L +IKP+EV +  T   LRIW DN  L  PQK 
Sbjct: 10   DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 1718 PKGRL--DQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKRCNL 1545
               R   + + P+ECRQAKISY+G++ I VCFQY+ G + R ++ FG  PIML SK CNL
Sbjct: 70   RISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCNL 129

Query: 1544 RDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGYTDK 1365
            R ADP KLVS++EEA+EMGGYFIL GLER++R++I+ KRN P+++ RNSF ++++GYTDK
Sbjct: 130  RGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTDK 189

Query: 1364 AVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIYVSL 1185
            A+VIRCVR D S+L++RLYYL+NGSARLGFWL GRE+LLPVG+ILKAL+DT D EIYV+L
Sbjct: 190  AIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNL 249

Query: 1184 TCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGLETE 1005
            T C+NE ++KGKG VGTQLVGER KIILDE+R L+L T+ QCL Y+GE F+PV+  L+ +
Sbjct: 250  TSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKND 309

Query: 1004 SGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPG 825
            S  I+ + VL+D + +HL+NN DKFNLLIFMLQKLF+ +DQT  PDN D+LQNHEVLLPG
Sbjct: 310  SYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG 369

Query: 824  HLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAIENL 645
            HLITLYLK++              E  + S  FDF  +  VKKVM+K   K V +A+EN+
Sbjct: 370  HLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENM 429

Query: 644  LIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPES 465
            L  G L +Q+GLDL QR G+++QAERLNFLRFVSHFR+VHRGA+FAGLR+T+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 464  WGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPSL 285
            WGFLCPVHTPDGEPCGLLNH+T T RITS+FDS G VKD+ KI+ SI++VL  +GM PSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPSL 549

Query: 284  PKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTM 105
            PK+   GPPE + VLLDGCVVG I+S+  EK V HIR LK+S  + IPDD+E+GYVPL+M
Sbjct: 550  PKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLSM 609

Query: 104  GGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            GGAYPGLYL TSPSRFVRPVRNISIPS  ++NIE
Sbjct: 610  GGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIE 643


>ref|XP_009414083.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Musa acuminata
            subsp. malaccensis]
          Length = 1169

 Score =  826 bits (2133), Expect = 0.0
 Identities = 404/638 (63%), Positives = 508/638 (79%), Gaps = 1/638 (0%)
 Frame = -2

Query: 1913 NTQKKEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLL 1734
            +T K +F+ L+ELF+PHIESFDY + EGLEK  ++I+P+E+ +  TG  LR+  +  +LL
Sbjct: 3    STSKSDFQALQELFRPHIESFDYFLDEGLEKAFLSIRPIEISDPHTGIKLRVSLEKPQLL 62

Query: 1733 FPQKGPKGRLDQ-IYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSK 1557
             P +   GRL + ++P+ECRQA+ISY GE +  VCFQYD+G V R ++ FG +PIML SK
Sbjct: 63   PPMRD--GRLSEPLFPHECRQARISYKGEFRALVCFQYDEGVVVRENINFGHLPIMLKSK 120

Query: 1556 RCNLRDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDG 1377
             C+LR ADP KLV+HKEEATEMGGYFI  GLERLVR++I+QK+N+P+++ R SFR +  G
Sbjct: 121  LCHLRGADPQKLVAHKEEATEMGGYFICNGLERLVRLLIIQKQNYPMSMVRKSFRNRGPG 180

Query: 1376 YTDKAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEI 1197
            Y DKAVV+RCVRED S++TL+LYYL+NGSARLGFW+ GREFLLPVG++LKAL+DTNDHEI
Sbjct: 181  YGDKAVVMRCVREDQSSVTLKLYYLENGSARLGFWIRGREFLLPVGIVLKALIDTNDHEI 240

Query: 1196 YVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGG 1017
            +VSLTCC+N+ +Q+ KG V TQL+GER +IILDEVR L+L T+ QCL ++GE FRP M G
Sbjct: 241  FVSLTCCYNDRYQREKGAVATQLIGERAQIILDEVRDLSLWTRSQCLKHIGEYFRPAMNG 300

Query: 1016 LETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEV 837
             ETES + + + VLRDY+F+HL +NHDKFNLLIF+LQKL+A VDQT APDN DALQN E+
Sbjct: 301  FETESHTTVAEAVLRDYIFVHLASNHDKFNLLIFLLQKLYALVDQTAAPDNPDALQNQEI 360

Query: 836  LLPGHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSA 657
            LLPGHLIT+YLK+R              E  +   + D   +  VKK  ++  S ++G A
Sbjct: 361  LLPGHLITIYLKERLQDWLKKSKRQLLDETAKKEKNIDIKNLTQVKKFFSR-SSATIGRA 419

Query: 656  IENLLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKL 477
            IE++L IG L + SGLDLPQR+G SIQAERLNF R++SHFRSVHRGA+FA +R+TSVRKL
Sbjct: 420  IESMLKIGRLNTASGLDLPQREGMSIQAERLNFFRYLSHFRSVHRGASFAKMRTTSVRKL 479

Query: 476  LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGM 297
            LPESWGFLCPV+TPDGEPCGLLNH+T  CR+ S++DS G VKDFLKIR SI+SVL GIGM
Sbjct: 480  LPESWGFLCPVNTPDGEPCGLLNHMTCACRVASFYDSEGRVKDFLKIRMSILSVLVGIGM 539

Query: 296  IPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYV 117
             P LPKL RAGPPEV+ VLLDGCVVGSISS  +E+AV HIRRLKLS   GIP+DLE+GYV
Sbjct: 540  TPLLPKLERAGPPEVLHVLLDGCVVGSISSVKIEEAVAHIRRLKLSGICGIPEDLEVGYV 599

Query: 116  PLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            PL+ GGAYPGLY+FT+ SRF+RPV N+   ++ ++NIE
Sbjct: 600  PLSFGGAYPGLYMFTNSSRFIRPVINLIQVTDGSKNIE 637


>ref|XP_008806649.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2
            [Phoenix dactylifera]
          Length = 1177

 Score =  825 bits (2132), Expect = 0.0
 Identities = 402/646 (62%), Positives = 510/646 (78%), Gaps = 6/646 (0%)
 Frame = -2

Query: 1922 MGVNTQKKEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNH 1743
            M     K ++E LRELF+PHI+SF+Y I EGLEK L++I+PVEV + STG  LRI+F+N 
Sbjct: 1    MASKATKPDYEALRELFRPHIDSFNYFIDEGLEKALLSIRPVEVSDPSTGGKLRIYFENP 60

Query: 1742 KLLFPQKG-----PKGRLDQ-IYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGD 1581
            ++  P +       KGR+ + +YP+ECRQA+ +Y GE K+++C QY++    +  M FG 
Sbjct: 61   QVFHPVREGRITTTKGRITEALYPHECRQARTTYKGEFKVTICLQYNERQPVQTPMSFGH 120

Query: 1580 VPIMLMSKRCNLRDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERN 1401
            +PIML S+ C+L+DADP KL+ HKEEATEMGGYFI  GLERL R++I+ KRN+P+ + R+
Sbjct: 121  LPIMLRSRLCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPMGMIRS 180

Query: 1400 SFREKQDGYTDKAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKAL 1221
            SFR +  GY+DKAVVIRCVRED S++T++LYYLQNGSARLGFW+ GREFLLPVG++LKAL
Sbjct: 181  SFRSRGVGYSDKAVVIRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKAL 240

Query: 1220 VDTNDHEIYVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGE 1041
            +DT+D EI+VSLTCC+N+ +QK +G VG+Q++GER +IIL+EVR L+LLT  QCL ++GE
Sbjct: 241  IDTSDREIFVSLTCCYNDRYQKQRGAVGSQIIGERAQIILEEVRDLSLLTSSQCLKHIGE 300

Query: 1040 SFRPVMGGLETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNT 861
             FRPVM G E E  + + + VLRDYVF+HL  NHDKFNLLIFMLQKL+A VDQTVAPDN+
Sbjct: 301  YFRPVMDGFENEFHTTVAEAVLRDYVFVHLTRNHDKFNLLIFMLQKLYALVDQTVAPDNS 360

Query: 860  DALQNHEVLLPGHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKY 681
            DALQN E+LLPGHLIT+Y+K++              E  +   +    +V  V K +N+ 
Sbjct: 361  DALQNQEILLPGHLITIYVKEKVQDWLNKSRRQLLDELAKKEKNLQISMVHQVAKFLNR- 419

Query: 680  PSKSVGSAIENLLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGL 501
             + SVG ++E+++ +G L + S LDLPQR+G +IQAERLNF RF+SHFRSVHRGA+FA +
Sbjct: 420  NAASVGRSVESMIKLGRLTTSSSLDLPQREGMTIQAERLNFYRFLSHFRSVHRGASFAKM 479

Query: 500  RSTSVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIV 321
            R TSVRKLLPESWGFLCPVHTPDGEPCGLLNH+TSTC I+S++DS G VKDFLKIR SI+
Sbjct: 480  RITSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCCISSFYDSEGKVKDFLKIRMSIM 539

Query: 320  SVLTGIGMIPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIP 141
            +VL G+GM P LPKL RAGPP V+ VLLDGCVVGSI+S+ VEKAV HIR LKLS  SG+P
Sbjct: 540  TVLVGVGMTPLLPKLERAGPPVVLHVLLDGCVVGSIASSKVEKAVAHIRSLKLSSLSGVP 599

Query: 140  DDLEIGYVPLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            +DLE+GYVPL++GG YPGLYLFTSPSRF+RPVRNIS  S+ N NIE
Sbjct: 600  NDLEVGYVPLSLGGTYPGLYLFTSPSRFIRPVRNISHSSDSNLNIE 645


>ref|XP_009355260.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
            [Pyrus x bretschneideri] gi|694328960|ref|XP_009355261.1|
            PREDICTED: DNA-directed RNA polymerase I subunit RPA2
            isoform X2 [Pyrus x bretschneideri]
          Length = 1179

 Score =  825 bits (2130), Expect = 0.0
 Identities = 401/635 (63%), Positives = 499/635 (78%), Gaps = 2/635 (0%)
 Frame = -2

Query: 1901 KEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFPQK 1722
            ++F  +RELF+ HIESFDYL+ +GLE +L  IKP+E+V+ ST  TL IW  +  L  P K
Sbjct: 22   EDFAAVRELFRHHIESFDYLVTKGLEVLLSKIKPIEIVDPSTNNTLTIWLGDPALYRPYK 81

Query: 1721 GPKGRLD-QIYPYECRQAKISYSGELKISVCFQY-DKGHVQRLDMGFGDVPIMLMSKRCN 1548
                 +   + P+ECRQAK+SY+G+    VCF+Y D G V R    FG +PIML SK C+
Sbjct: 82   EESKMMQVPLLPFECRQAKLSYTGKFMAEVCFKYNDSGAVIREKFNFGQLPIMLQSKLCH 141

Query: 1547 LRDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGYTD 1368
            LR A P KLVS+KEEA+EMGGYFIL GLER+VR++I+ KRN+P ++ RNSFR++++GYTD
Sbjct: 142  LRGATPQKLVSYKEEASEMGGYFILNGLERVVRLVILPKRNYPTSMVRNSFRDRKEGYTD 201

Query: 1367 KAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIYVS 1188
            KAVVIRC RED S++T++LYYL+NGSARLGFW+ GRE+LLPVGV+LKAL+DT D EIY  
Sbjct: 202  KAVVIRCEREDQSSVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDREIYEC 261

Query: 1187 LTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGLET 1008
            LTCC+ E ++KGKG VGTQLVGER +IILDEVR L L T+ +CL ++GE FRP+MGGLE 
Sbjct: 262  LTCCYVENYEKGKGAVGTQLVGERAQIILDEVRDLKLFTRHECLEHIGEHFRPLMGGLEN 321

Query: 1007 ESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLP 828
            E  S++GD V+ +Y+ +HL   HDKFNLLIFM+QKLF+ VDQT  PDN D+LQNHEVLLP
Sbjct: 322  ERPSVVGDAVIMNYILVHLNKAHDKFNLLIFMVQKLFSLVDQTSVPDNPDSLQNHEVLLP 381

Query: 827  GHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAIEN 648
            GHLIT+Y+K++              E  +N   F+FG +  VKK+M+K P+K +  A+EN
Sbjct: 382  GHLITIYIKEKLEEWLQRTKKLIEDEINKNK-DFEFGNIAKVKKLMDKNPAKQISLAVEN 440

Query: 647  LLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPE 468
            +L  G L +QSGLDL QR G ++QAERLN+LRF+SHFR+VHRGA+FAGLR+TSVRKLLPE
Sbjct: 441  MLKTGRLNTQSGLDLQQRAGLTVQAERLNYLRFISHFRAVHRGASFAGLRTTSVRKLLPE 500

Query: 467  SWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPS 288
            SWGFLCPVHTPDGEPCGLLNH+T  CRITS+FD+ G ++DF KIR+SI+SVL+ +GM  S
Sbjct: 501  SWGFLCPVHTPDGEPCGLLNHMTHICRITSFFDAQGNIRDFSKIRESILSVLSAVGMKTS 560

Query: 287  LPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLT 108
             P LV+AGPP    VLLDGCVVGSISS+ VEK V H+RRLK++    IPDDLE+GYVPL+
Sbjct: 561  KPNLVQAGPPAAFSVLLDGCVVGSISSSKVEKVVAHLRRLKVAAAPVIPDDLEVGYVPLS 620

Query: 107  MGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            MGGAYPGLYLFT PSRFVRPV+NISIPS E QNIE
Sbjct: 621  MGGAYPGLYLFTIPSRFVRPVKNISIPSVEGQNIE 655


>ref|XP_008445376.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Cucumis melo]
          Length = 1173

 Score =  823 bits (2126), Expect = 0.0
 Identities = 403/637 (63%), Positives = 503/637 (78%), Gaps = 2/637 (0%)
 Frame = -2

Query: 1907 QKKEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFP 1728
            + +++E LRELF+ HIESFD+L+  GLE ++ +IKPVE+ +  T + LRIW    +L  P
Sbjct: 7    ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66

Query: 1727 QKGPKGRL--DQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKR 1554
            QK    R   + + PYECRQAKISY+G+    VCFQYD+  V R    FG  PIML SK 
Sbjct: 67   QKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSKL 126

Query: 1553 CNLRDADPAKLVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGY 1374
            C+LR  DP KLVS+ EEA+EMGGYF++ GLER+VR++I  KRN+P+++ RNSF ++++GY
Sbjct: 127  CHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPMSMVRNSFSDRREGY 186

Query: 1373 TDKAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIY 1194
            TDKAVVIRCVRED S++T++LYYL+NGSARLGFW+ G+E+LLP+GV+LKAL+DTNDHEIY
Sbjct: 187  TDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTNDHEIY 246

Query: 1193 VSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGL 1014
             SLT C+++ H K KG V TQLVGER KIILDEVR LAL  ++QCL ++G+ F+PVM GL
Sbjct: 247  ASLTSCYSDKHGKSKGAVATQLVGERAKIILDEVRDLALFDRRQCLDHIGQHFQPVMEGL 306

Query: 1013 ETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVL 834
              E  S + D VL++Y+F+HL+NN+DKFNLLIFM QKLF+ +DQT  PDN D+LQN +VL
Sbjct: 307  GKEKFSTVADAVLKNYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVL 366

Query: 833  LPGHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAI 654
            LPG LITLYLK++              E    S +F+F  + +VKKVM+K PSK + SA+
Sbjct: 367  LPGQLITLYLKEKLEDWLQKSKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQISSAV 426

Query: 653  ENLLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLL 474
            EN+L  G L +Q+GLDL QR GF++QAERLNFLRFVSHFR+VHRGA+FAGLR+T+VRKLL
Sbjct: 427  ENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLL 486

Query: 473  PESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMI 294
            PESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYF+S G V+DF KIR SI+SVL  +GMI
Sbjct: 487  PESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMI 546

Query: 293  PSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVP 114
            PSLPKLV+ GPP+V+ VLLDG +VG ISSN VEK V H+RRLK+     IPDDLE+GYVP
Sbjct: 547  PSLPKLVQMGPPDVLNVLLDGRLVGYISSNEVEKVVAHLRRLKVLSPHVIPDDLEVGYVP 606

Query: 113  LTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            L++ GAYPGLYLFTSPSRFVRPV+N+SI  E+N NIE
Sbjct: 607  LSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIE 643


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
            [Solanum lycopersicum]
          Length = 1184

 Score =  822 bits (2122), Expect = 0.0
 Identities = 400/637 (62%), Positives = 501/637 (78%), Gaps = 3/637 (0%)
 Frame = -2

Query: 1904 KKEFENLRELFKPHIESFDYLIVEGLEKILVNIKPVEVVNGSTGQTLRIWFDNHKLLFPQ 1725
            +K++  L+ELF  HIESFDY++  GLE +L+NIKP+E+V+  +   LRIWF   +L  PQ
Sbjct: 22   EKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPPQ 81

Query: 1724 K--GPKGRLDQIYPYECRQAKISYSGELKISVCFQYDKGHVQRLDMGFGDVPIMLMSKRC 1551
            K    K   D +YP+ECRQAKISYSG+  + +CFQY  G V R    FG  PIML SK C
Sbjct: 82   KERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKLC 141

Query: 1550 NLRDADPAK-LVSHKEEATEMGGYFILKGLERLVRIIIMQKRNFPLNVERNSFREKQDGY 1374
            +LR AD +K LV++KEE +EMGGYFILKGLER++R+II+ KRN+P ++ RNSFR++++GY
Sbjct: 142  HLRGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGY 201

Query: 1373 TDKAVVIRCVREDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALVDTNDHEIY 1194
            +DKAVVIRCVRED SA++L+LYYL NGSARLGFW+ GRE+LLPVG+ILKALVDT DHEIY
Sbjct: 202  SDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIY 261

Query: 1193 VSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLALLTQQQCLHYLGESFRPVMGGL 1014
            V+LTCC+NE   + KG VGTQLVGER KIILDEV++L+L T+ QCL ++GE F+PV+ G+
Sbjct: 262  VNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGM 321

Query: 1013 ETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVL 834
            + +S   + D VLRDY+F+HL+NNHDKFNLLIFMLQKLF+ +DQT   DN D+LQN EVL
Sbjct: 322  QNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVL 381

Query: 833  LPGHLITLYLKDRXXXXXXXXXXXXXXEFRRNSPSFDFGIVENVKKVMNKYPSKSVGSAI 654
            LPGHLIT+YLK++              E       F+   + +VKK + K   K +G  I
Sbjct: 382  LPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLTI 441

Query: 653  ENLLIIGTLQSQSGLDLPQRKGFSIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLL 474
            E++L  G L +QSGLDL QR G ++QAE+LNFLRF+SHFR+VHRGA+FAGLR+TSVRKLL
Sbjct: 442  ESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLL 501

Query: 473  PESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMI 294
            PESWGFLCPVHTPDGEPCGLLNH+T++CRITSY+DS G VKDF K+R SI++VL  IGM 
Sbjct: 502  PESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMT 561

Query: 293  PSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVP 114
            PS PKLV+AGPPE++ VLLDG + G I S+++EKAV H+RRLKLS  S IP DLE+GY+P
Sbjct: 562  PSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYIP 621

Query: 113  LTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIE 3
            L+M GAYPGLYLFTSPSRFVRPVRNIS P+EE  ++E
Sbjct: 622  LSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLE 658