BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00005290
         (2519 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010253475.1| PREDICTED: regulator of nonsense transcripts...  1116   0.0  
ref|XP_007009694.1| Regulator of nonsense transcripts 2 isoform ...  1114   0.0  
ref|XP_010658463.1| PREDICTED: regulator of nonsense transcripts...  1105   0.0  
ref|XP_010658462.1| PREDICTED: regulator of nonsense transcripts...  1100   0.0  
ref|XP_002523924.1| Regulator of nonsense transcripts, putative ...  1100   0.0  
ref|XP_012073660.1| PREDICTED: regulator of nonsense transcripts...  1098   0.0  
gb|KHF97823.1| Regulator of nonsense transcripts 2 [Gossypium ar...  1095   0.0  
gb|KJB67686.1| hypothetical protein B456_010G203700 [Gossypium r...  1095   0.0  
ref|XP_012449899.1| PREDICTED: regulator of nonsense transcripts...  1095   0.0  
ref|XP_002315268.1| hypothetical protein POPTR_0010s22310g [Popu...  1094   0.0  
ref|XP_004296960.1| PREDICTED: regulator of nonsense transcripts...  1094   0.0  
ref|XP_008233383.1| PREDICTED: regulator of nonsense transcripts...  1093   0.0  
ref|XP_011027031.1| PREDICTED: regulator of nonsense transcripts...  1092   0.0  
ref|XP_010253476.1| PREDICTED: regulator of nonsense transcripts...  1092   0.0  
ref|XP_002312048.2| hypothetical protein POPTR_0008s04510g [Popu...  1090   0.0  
ref|XP_007220295.1| hypothetical protein PRUPE_ppa000441mg [Prun...  1090   0.0  
ref|XP_011046308.1| PREDICTED: regulator of nonsense transcripts...  1087   0.0  
ref|XP_009378135.1| PREDICTED: regulator of nonsense transcripts...  1083   0.0  
ref|XP_008354091.1| PREDICTED: regulator of nonsense transcripts...  1083   0.0  
ref|XP_010087872.1| Regulator of nonsense transcripts 2 [Morus n...  1082   0.0  

>ref|XP_010253475.1| PREDICTED: regulator of nonsense transcripts UPF2 isoform X1 [Nelumbo
            nucifera]
          Length = 1203

 Score = 1116 bits (2887), Expect = 0.0
 Identities = 576/746 (77%), Positives = 620/746 (83%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDECRVPG----KQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MDHPEDECRV G    KQDDEE  ARL+EFKKSMEAK+ LRQSNLNPERPD+GFLRTLDS
Sbjct: 1    MDHPEDECRVGGEHHGKQDDEETAARLDEFKKSMEAKIALRQSNLNPERPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEEQ+E MM+ELR VNLSKFVSEAVTAICDAKLRTSDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEEQRESMMDELRSVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSL+QGLLK+F  GKSGD+LDVD+S KAMKKRSTLKLL+ELYFVGVIE+
Sbjct: 121  SLLHQRYKDFSPSLIQGLLKVFFPGKSGDDLDVDRSLKAMKKRSTLKLLMELYFVGVIED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
            A +F+ IIKDLTS +HLKDRD T  NLSLL SFARQ R+FLGL  SGQE  EEFFKGLNI
Sbjct: 181  ASIFINIIKDLTSLEHLKDRDTTQMNLSLLLSFARQGRIFLGLPQSGQEIHEEFFKGLNI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            TADQ           YD AAELLQSEH +LRQ+E+EN+KILNAKGELS+EN T YEK RK
Sbjct: 241  TADQKKIFKKAFYTYYDAAAELLQSEHTSLRQMENENSKILNAKGELSDENVTSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYD LFRGVSSLAEALDMQPP+MPED HTTRVTTG+D SSPA+GKESS LEP+WDDEDTR
Sbjct: 301  SYDQLFRGVSSLAEALDMQPPVMPEDSHTTRVTTGEDASSPAAGKESSVLEPLWDDEDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E+K                          Q+  E C   
Sbjct: 361  AFYECLPDLRAFVPAVLLGEAESKI-AEQSSKTQEQPTDSTSEADQGHVAQDGAEACVDS 419

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
               Q+G                                    + EKEK+KG+EGT+LDAL
Sbjct: 420  GPSQDG--KSDEKVKGKEERDKEKTKDSDKDKGKEKDSERKGETEKEKIKGLEGTNLDAL 477

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTVEFCYLNSKSNRKRLVRALF+VPRTSLELLPYYSR+VATL+TC
Sbjct: 478  LQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTC 537

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+SSMLL ML+EEFNFLINKKDQMNIETKIRNIRF+GELCKF+IAP G VF CLK CL
Sbjct: 538  MKDVSSMLLQMLDEEFNFLINKKDQMNIETKIRNIRFVGELCKFRIAPGGLVFGCLKACL 597

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 598  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 657

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARVSKVRPPLHQYIRKLLF+DL+KS+IEHVLRQLRKLPWSECE YLLKCF+
Sbjct: 658  YLCKPPERSARVSKVRPPLHQYIRKLLFTDLDKSTIEHVLRQLRKLPWSECEDYLLKCFM 717

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVHKGKYSQV LIASLTA LSRYHDE
Sbjct: 718  KVHKGKYSQVHLIASLTAGLSRYHDE 743


>ref|XP_007009694.1| Regulator of nonsense transcripts 2 isoform 1 [Theobroma cacao]
            gi|590564560|ref|XP_007009695.1| Regulator of nonsense
            transcripts 2 isoform 1 [Theobroma cacao]
            gi|508726607|gb|EOY18504.1| Regulator of nonsense
            transcripts 2 isoform 1 [Theobroma cacao]
            gi|508726608|gb|EOY18505.1| Regulator of nonsense
            transcripts 2 isoform 1 [Theobroma cacao]
          Length = 1193

 Score = 1114 bits (2881), Expect = 0.0
 Identities = 575/746 (77%), Positives = 620/746 (83%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDECRVPG----KQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MDH EDECR  G    KQDDEE VARLEE KKS+E KM LRQSNLNPERPD+GFLRTLDS
Sbjct: 1    MDHHEDECRAGGEHHGKQDDEEAVARLEEMKKSIEGKMALRQSNLNPERPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SI+RNTAVIKKLKQINEEQKEG+MEELR VNLSKFVSEAVTAICDAKL++SDIQAAVQIC
Sbjct: 61   SIRRNTAVIKKLKQINEEQKEGLMEELRSVNLSKFVSEAVTAICDAKLKSSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLL+QRYK+FSPSL+QGLLK+F  GKSGD+LD D++ KAMKKRSTLKLLLELYFVGVIE+
Sbjct: 121  SLLNQRYKDFSPSLIQGLLKVFFPGKSGDDLDADRNLKAMKKRSTLKLLLELYFVGVIED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
             G+F+ IIKDLTS++HLKDRDAT TNL+LLASFARQ RVFLGL +SGQE  EEFFKGLNI
Sbjct: 181  NGIFINIIKDLTSTEHLKDRDATQTNLTLLASFARQGRVFLGLPISGQEILEEFFKGLNI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            TADQ           YD   ELLQSEHA LRQ+EHENAKILNAKGEL+EENA+ YEK RK
Sbjct: 241  TADQKKTFRKAFHAYYDAVTELLQSEHATLRQMEHENAKILNAKGELNEENASSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYDHL+R VSSLAEALDMQ P+MPED HTTRVTTG+D SSPA+GKESS LE +WDD+DTR
Sbjct: 301  SYDHLYRNVSSLAEALDMQSPVMPEDSHTTRVTTGEDASSPATGKESSTLEAIWDDDDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E K                          Q+A E  A  
Sbjct: 361  AFYECLPDLRAFVPAVLLGEAEPKGIEQTSKAQEQPTDSSTEADQSTAVAQDAVEASADS 420

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
              LQEG                                    +NEKEKLKG+EGT+LDAL
Sbjct: 421  GNLQEG--KSIEKGKDKEEKDKERNKDPDKEKGKEKDSDKKGENEKEKLKGLEGTNLDAL 478

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTVEFCYLNSKSNRKRLVR LF+VPRTSLELLPYYSR+VATL+TC
Sbjct: 479  LQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRTLFNVPRTSLELLPYYSRMVATLSTC 538

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+ SMLL MLEEEFNFLINKKDQMNIETKIRNIRFIGELCKF+IAPAG VF CLK CL
Sbjct: 539  MKDVPSMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFRIAPAGLVFSCLKTCL 598

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDFTHHNIDVACNLLETCGRFLYRSPETT+RMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 599  DDFTHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLVENAY 658

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARVSKVRPPLHQYIRKLLF+DL+KSSIEHVLRQLRKLPWSECE+YLLKCF+
Sbjct: 659  YLCKPPERSARVSKVRPPLHQYIRKLLFTDLDKSSIEHVLRQLRKLPWSECESYLLKCFM 718

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVHKGKY Q+ LIASLTA LSRYHDE
Sbjct: 719  KVHKGKYGQIHLIASLTAGLSRYHDE 744


>ref|XP_010658463.1| PREDICTED: regulator of nonsense transcripts UPF2 isoform X2 [Vitis
            vinifera] gi|296086085|emb|CBI31526.3| unnamed protein
            product [Vitis vinifera]
          Length = 1193

 Score = 1105 bits (2858), Expect = 0.0
 Identities = 570/746 (76%), Positives = 623/746 (83%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDECRVPG----KQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MDH ED+CRV G    KQD EE VARLEEFKKSMEAKM LR++NLNPERPD+GFLRTLDS
Sbjct: 1    MDHHEDDCRVGGDHHGKQDGEEAVARLEEFKKSMEAKMALRRTNLNPERPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEEQ+EG+M++LR VNLSKFVSEAVTAICDAKL+TSDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEEQREGLMDDLRGVNLSKFVSEAVTAICDAKLKTSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSL+QGLLK+F  GKSGDELD+D++ KAMKKRSTLKLLLELYFVGV+E+
Sbjct: 121  SLLHQRYKDFSPSLIQGLLKVFFPGKSGDELDLDRNLKAMKKRSTLKLLLELYFVGVVED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
            +G+F+ IIKDLTS +HLKDRD T TNLSLLASFARQ R+FLG  LSGQE  EEFFKGLNI
Sbjct: 181  SGIFINIIKDLTSIEHLKDRDTTQTNLSLLASFARQGRIFLGFPLSGQEIHEEFFKGLNI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            TAD            YD AAELLQ+EH +LRQ+EHENAKILNAKGELS+EN + YEK RK
Sbjct: 241  TADHKKIFRKAFHTYYDAAAELLQAEHTSLRQMEHENAKILNAKGELSDENVSSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYDHL+RGVSSLAEALDMQPP+MPEDGHTTRVT+G+D SSPA+ KESSALE VWDDEDTR
Sbjct: 301  SYDHLYRGVSSLAEALDMQPPVMPEDGHTTRVTSGEDVSSPAA-KESSALEAVWDDEDTR 359

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E K                          Q+A E     
Sbjct: 360  AFYECLPDLRAFVPAVLLGEAEPKVNEQSAKTQEQPTDLAPEADQSQSVNQDAAEISVDS 419

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
             + +EG                                    +NEKEKLKG+EGT+LD L
Sbjct: 420  CSPREG--RSNEKGKDKEEKEKEKSKDPDKEKGKERDADRKGENEKEKLKGLEGTNLDGL 477

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTV+FCYLNSKSNRKRLVRALF+VPRTSLELLPYYSR+VATL+TC
Sbjct: 478  LQRLPGCVSRDLIDQLTVDFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTC 537

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+SSMLL +LEEEFNFLINKKDQMNIETKIRNIRF+GELCKF+IAPAG VF CLK CL
Sbjct: 538  MKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNIRFLGELCKFRIAPAGLVFSCLKACL 597

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 598  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 657

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARVSKVRPPLHQYIRKLLFSDL+KSSIEHVLRQLRKLPWSECE YLLKCF+
Sbjct: 658  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFM 717

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVH+GKY Q+ LIASLT+ LSRYHD+
Sbjct: 718  KVHRGKYGQIHLIASLTSGLSRYHDD 743


>ref|XP_010658462.1| PREDICTED: regulator of nonsense transcripts UPF2 isoform X1 [Vitis
            vinifera]
          Length = 1195

 Score = 1100 bits (2845), Expect = 0.0
 Identities = 570/748 (76%), Positives = 623/748 (83%), Gaps = 6/748 (0%)
 Frame = -1

Query: 2228 MDHPEDECRVPG----KQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDT--GFLRTL 2067
            MDH ED+CRV G    KQD EE VARLEEFKKSMEAKM LR++NLNPERP+T  GFLRTL
Sbjct: 1    MDHHEDDCRVGGDHHGKQDGEEAVARLEEFKKSMEAKMALRRTNLNPERPETDSGFLRTL 60

Query: 2066 DSSIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQ 1887
            DSSIKRNTAVIKKLKQINEEQ+EG+M++LR VNLSKFVSEAVTAICDAKL+TSDIQAAVQ
Sbjct: 61   DSSIKRNTAVIKKLKQINEEQREGLMDDLRGVNLSKFVSEAVTAICDAKLKTSDIQAAVQ 120

Query: 1886 ICSLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVI 1707
            ICSLLHQRYK+FSPSL+QGLLK+F  GKSGDELD+D++ KAMKKRSTLKLLLELYFVGV+
Sbjct: 121  ICSLLHQRYKDFSPSLIQGLLKVFFPGKSGDELDLDRNLKAMKKRSTLKLLLELYFVGVV 180

Query: 1706 EEAGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGL 1527
            E++G+F+ IIKDLTS +HLKDRD T TNLSLLASFARQ R+FLG  LSGQE  EEFFKGL
Sbjct: 181  EDSGIFINIIKDLTSIEHLKDRDTTQTNLSLLASFARQGRIFLGFPLSGQEIHEEFFKGL 240

Query: 1526 NITADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQ 1347
            NITAD            YD AAELLQ+EH +LRQ+EHENAKILNAKGELS+EN + YEK 
Sbjct: 241  NITADHKKIFRKAFHTYYDAAAELLQAEHTSLRQMEHENAKILNAKGELSDENVSSYEKL 300

Query: 1346 RKSYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDED 1167
            RKSYDHL+RGVSSLAEALDMQPP+MPEDGHTTRVT+G+D SSPA+ KESSALE VWDDED
Sbjct: 301  RKSYDHLYRGVSSLAEALDMQPPVMPEDGHTTRVTSGEDVSSPAA-KESSALEAVWDDED 359

Query: 1166 TRAFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCA 987
            TRAFYECLPDLRAFVPAVLLGE+E K                          Q+A E   
Sbjct: 360  TRAFYECLPDLRAFVPAVLLGEAEPKVNEQSAKTQEQPTDLAPEADQSQSVNQDAAEISV 419

Query: 986  IGEALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLD 807
               + +EG                                    +NEKEKLKG+EGT+LD
Sbjct: 420  DSCSPREG--RSNEKGKDKEEKEKEKSKDPDKEKGKERDADRKGENEKEKLKGLEGTNLD 477

Query: 806  ALLQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLA 627
             LLQRLPGCVSRDLID LTV+FCYLNSKSNRKRLVRALF+VPRTSLELLPYYSR+VATL+
Sbjct: 478  GLLQRLPGCVSRDLIDQLTVDFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLS 537

Query: 626  TCMKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKG 447
            TCMKD+SSMLL +LEEEFNFLINKKDQMNIETKIRNIRF+GELCKF+IAPAG VF CLK 
Sbjct: 538  TCMKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNIRFLGELCKFRIAPAGLVFSCLKA 597

Query: 446  CLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVEN 267
            CLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVEN
Sbjct: 598  CLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVEN 657

Query: 266  AYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKC 87
            AYYLCKPPERSARVSKVRPPLHQYIRKLLFSDL+KSSIEHVLRQLRKLPWSECE YLLKC
Sbjct: 658  AYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKC 717

Query: 86   FLKVHKGKYSQVDLIASLTACLSRYHDE 3
            F+KVH+GKY Q+ LIASLT+ LSRYHD+
Sbjct: 718  FMKVHRGKYGQIHLIASLTSGLSRYHDD 745


>ref|XP_002523924.1| Regulator of nonsense transcripts, putative [Ricinus communis]
            gi|223536854|gb|EEF38493.1| Regulator of nonsense
            transcripts, putative [Ricinus communis]
          Length = 824

 Score = 1100 bits (2845), Expect = 0.0
 Identities = 571/746 (76%), Positives = 619/746 (82%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDECRVPG----KQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            M+  ED+ RV G    KQDDEE  ARLEE KKS+EAK  LRQSNLNPERPD+GFLRTLDS
Sbjct: 1    MEQHEDDGRVGGESQSKQDDEEAAARLEEIKKSIEAKAALRQSNLNPERPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEEQ+EG+M+ELR+VNLSKFVSEAVTAICDAKLR+SDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEEQREGLMDELRNVNLSKFVSEAVTAICDAKLRSSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSLVQGLLK+F  GKSG+ELDVD++SKAMKKRSTLKLLLELYFVGVIE+
Sbjct: 121  SLLHQRYKDFSPSLVQGLLKVFFPGKSGEELDVDRNSKAMKKRSTLKLLLELYFVGVIED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
            + +F+ IIKDLTS +HLKDRDAT TNL+LLASFARQ RVFLGLSLSGQE  EEF KGLNI
Sbjct: 181  SSIFINIIKDLTSVEHLKDRDATQTNLTLLASFARQGRVFLGLSLSGQEIHEEFVKGLNI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            T DQ           YD  +ELLQSEH +LRQ+EHENAKILNAKGELS+EN   YEK RK
Sbjct: 241  TTDQKKIFRKAFNTYYDAVSELLQSEHTSLRQMEHENAKILNAKGELSDENVASYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYDHL+R VSSLAEALDMQPP+MPEDGHTTRVTTG+D SSPA+GK+SS LE +WDDEDTR
Sbjct: 301  SYDHLYRNVSSLAEALDMQPPVMPEDGHTTRVTTGEDASSPATGKDSSVLEALWDDEDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E K                          Q+  E  A  
Sbjct: 361  AFYECLPDLRAFVPAVLLGEAEPKV----------NEQSVKTQEQPSQPTQDTAESSADT 410

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
              +QEG                                    +NEK+KLKG+EGTSLDAL
Sbjct: 411  GTVQEG--KSIEKGKDKDEKDKEKAKDPEKEKNKEKDAERKGENEKDKLKGLEGTSLDAL 468

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTVEFCYLNSKSNRK+LVRALF+VPRTSLELLPYYSR+VATL+TC
Sbjct: 469  LQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTC 528

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+SSMLL MLEEEFNFLINKKDQMNIETKIRNIRF+GELCKFKIAP G VF CLK CL
Sbjct: 529  MKDVSSMLLQMLEEEFNFLINKKDQMNIETKIRNIRFLGELCKFKIAPPGLVFSCLKACL 588

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 589  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 648

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARVSKVRPPL+QYIRKLLFSDL KSSIE+VLRQLRKLPWSEC+ YLLKCF+
Sbjct: 649  YLCKPPERSARVSKVRPPLYQYIRKLLFSDLEKSSIEYVLRQLRKLPWSECDAYLLKCFM 708

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVHKGKY Q++LIASLTA LSRYHDE
Sbjct: 709  KVHKGKYGQINLIASLTAGLSRYHDE 734


>ref|XP_012073660.1| PREDICTED: regulator of nonsense transcripts UPF2 [Jatropha curcas]
            gi|643740550|gb|KDP46148.1| hypothetical protein
            JCGZ_06659 [Jatropha curcas]
          Length = 1195

 Score = 1098 bits (2841), Expect = 0.0
 Identities = 568/746 (76%), Positives = 624/746 (83%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDECRVPG----KQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MD  EDECRV G    KQDD E VARLEE KKS+E K  LRQSNLNPERPD+GFLRTLDS
Sbjct: 1    MDSHEDECRVGGEQQAKQDDGEAVARLEEIKKSIEVKAALRQSNLNPERPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEEQ+EG+M+ELR+VNLSKFVSEAVTAICDAKLR+SDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEEQREGLMDELRNVNLSKFVSEAVTAICDAKLRSSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSLVQGLLK+F  GK+G++LDVD++SKAMKKRSTLKLLLELYFVGVIE+
Sbjct: 121  SLLHQRYKDFSPSLVQGLLKVFFPGKAGEDLDVDRNSKAMKKRSTLKLLLELYFVGVIED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
            + +F+ IIKDLTS +HLKDRDAT TNL+LLASFARQ RVFLGLSLSGQE  EEFFKGLNI
Sbjct: 181  SSIFINIIKDLTSVEHLKDRDATQTNLTLLASFARQGRVFLGLSLSGQEIHEEFFKGLNI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            TADQ           +D  +ELLQSEHA+LRQ+EHENAKILNAKGELSEEN + YEK RK
Sbjct: 241  TADQKKIFRKAFTTYFDCVSELLQSEHASLRQMEHENAKILNAKGELSEENVSSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYDHL+R VSSLAEALDMQPP+MPEDGHTTRVTTG+D SSPA+GK+SS LE +WDDEDTR
Sbjct: 301  SYDHLYRNVSSLAEALDMQPPVMPEDGHTTRVTTGEDVSSPAAGKDSSILEALWDDEDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E KA                       + Q+  E     
Sbjct: 361  AFYECLPDLRAFVPAVLLGEAEPKA-NEQSAKAQEQPNEVAPESDQGQSTQDTAELSVDS 419

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
              LQEG                                    D++KEKLKG+EGT+LDAL
Sbjct: 420  GTLQEG--KSIEKVKDKEEKDKEKAKDPEKEKGKEKDAEKKGDSDKEKLKGLEGTNLDAL 477

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTVEFCYLNSKSNRK+LVRALF+VPRTSLELLPYYSR+VATL+TC
Sbjct: 478  LQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTC 537

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKDISSML+ MLEEEFNFLINKKDQMNIETKIRNIRF+GELCKF+IAP G +F CLK CL
Sbjct: 538  MKDISSMLVQMLEEEFNFLINKKDQMNIETKIRNIRFLGELCKFRIAPPGLIFSCLKACL 597

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDFTHHNIDVACNLLETCGRFLYRSPET VRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 598  DDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAY 657

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARVSKVRPPL+QYIRKLLFSDL+KSSIE+VLRQLRKLPW++C+ YLLKCF+
Sbjct: 658  YLCKPPERSARVSKVRPPLYQYIRKLLFSDLDKSSIEYVLRQLRKLPWNDCDAYLLKCFM 717

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVHKGKY Q++LIASLT+ LSRYHDE
Sbjct: 718  KVHKGKYGQINLIASLTSGLSRYHDE 743


>gb|KHF97823.1| Regulator of nonsense transcripts 2 [Gossypium arboreum]
          Length = 1194

 Score = 1095 bits (2832), Expect = 0.0
 Identities = 571/750 (76%), Positives = 617/750 (82%), Gaps = 8/750 (1%)
 Frame = -1

Query: 2228 MDHPEDECRVPG----KQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MD+ EDE R  G    KQDDEE VARLEE KKS+E KM LRQ+NLNPERPD+GFLRTLDS
Sbjct: 1    MDNQEDESRAGGEHHGKQDDEEAVARLEEIKKSIEGKMALRQTNLNPERPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEE KEG+MEELR VNLSKFVSEAV+AICDAKL++SDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEELKEGLMEELRSVNLSKFVSEAVSAICDAKLKSSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSL+QGLLK+F  GKSGD+LD D++ KAMKKRSTLKLLLELYFVGVIE+
Sbjct: 121  SLLHQRYKDFSPSLIQGLLKVFFPGKSGDDLDADRNLKAMKKRSTLKLLLELYFVGVIED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
             G+F+ IIKDLTS++HLKDRDAT TNL+LLASFARQ RVFLGL +SGQE Q+EFFKGL I
Sbjct: 181  NGIFINIIKDLTSTEHLKDRDATQTNLTLLASFARQGRVFLGLPVSGQEIQDEFFKGLGI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            TADQ           YD   ELLQSEHA+LRQ+EHENAKILNAKGELSEENA+ YEK RK
Sbjct: 241  TADQKKTFRKAFNLYYDAVTELLQSEHASLRQMEHENAKILNAKGELSEENASSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYDHL+R VSSLAEALDMQPP+MPED HTTRVTTG+D  S  SGKESS LE +WDD+DTR
Sbjct: 301  SYDHLYRNVSSLAEALDMQPPVMPEDSHTTRVTTGEDALS-TSGKESSNLEAIWDDDDTR 359

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGESE+KA                         Q+A +  A  
Sbjct: 360  AFYECLPDLRAFVPAVLLGESESKASEQMSKAQEQPIESSSEADQSTPVAQDAVDISADS 419

Query: 980  EALQEG----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTS 813
              LQEG                                        +NEKEKLKG EGT+
Sbjct: 420  GTLQEGKSVEKGKDKEEKDKEKTKDPDKEKGKEKEREKEKDTDKKGENEKEKLKGSEGTN 479

Query: 812  LDALLQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVAT 633
            LDALLQRLPGCVSRDLID LTVEFCYLNSKSNRKRLVRALF+VPRTSLELLPYYSR+VAT
Sbjct: 480  LDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVAT 539

Query: 632  LATCMKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICL 453
            L+TCMKD+ SMLL MLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKI+  G VF CL
Sbjct: 540  LSTCMKDVPSMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKISSPGLVFSCL 599

Query: 452  KGCLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLV 273
            K CLDDFTHHNIDVACNLLETCGRFLYRSPETT+RMANMLEILMRLKNVKNLDPRHSTLV
Sbjct: 600  KTCLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLV 659

Query: 272  ENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLL 93
            ENAYYLCKPPERSARVSKVRPPLHQYIRKLLF+DL+KSSIEHVLRQLRKLPWSECE+YLL
Sbjct: 660  ENAYYLCKPPERSARVSKVRPPLHQYIRKLLFTDLDKSSIEHVLRQLRKLPWSECESYLL 719

Query: 92   KCFLKVHKGKYSQVDLIASLTACLSRYHDE 3
            KCF+KVHKGKY Q+ LIASLTA LSRYHDE
Sbjct: 720  KCFMKVHKGKYGQIHLIASLTAGLSRYHDE 749


>gb|KJB67686.1| hypothetical protein B456_010G203700 [Gossypium raimondii]
          Length = 1060

 Score = 1095 bits (2831), Expect = 0.0
 Identities = 572/754 (75%), Positives = 617/754 (81%), Gaps = 12/754 (1%)
 Frame = -1

Query: 2228 MDHPEDECRVPG----KQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MD+ EDE R  G    KQDDEE VARLEE KKS+E K+ LRQ+NLNPERPD+GFLRTLDS
Sbjct: 1    MDNQEDESRAGGEHHGKQDDEEAVARLEEIKKSIEGKVALRQTNLNPERPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEE KEG+MEELR VNLSKFVSEAV+AICDAKL++SDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEELKEGLMEELRSVNLSKFVSEAVSAICDAKLKSSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSL+QGLLK+F  GKSGD+LD D++ KAMKKRSTLKLLLELYFVGVIE+
Sbjct: 121  SLLHQRYKDFSPSLIQGLLKVFFPGKSGDDLDADRNLKAMKKRSTLKLLLELYFVGVIED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
             G+F+ IIKDLTS++HLKDRDAT TNL+LLASFARQ RVFLGL +SGQE QEEFFKGL I
Sbjct: 181  NGIFINIIKDLTSTEHLKDRDATQTNLTLLASFARQGRVFLGLPVSGQEIQEEFFKGLGI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            TADQ           YD   ELLQSEHA+LRQ+EHENAKILNAKGELSEENA+ YEK RK
Sbjct: 241  TADQKKTFRKAFNLYYDAVTELLQSEHASLRQMEHENAKILNAKGELSEENASSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYDHL+R VSSLAEALDMQPP+MPED HTTRVTTGDD SS  SGKESS LE +WDD+DTR
Sbjct: 301  SYDHLYRNVSSLAEALDMQPPVMPEDSHTTRVTTGDDASS-TSGKESSNLEAIWDDDDTR 359

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGESE+KA                         Q+A +  A  
Sbjct: 360  AFYECLPDLRAFVPAVLLGESESKASEQTSKAQEQPTESSSEADQSTPVAQDAVDISADS 419

Query: 980  EALQEG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGV 825
              LQEG                                            +NEKEKLKG 
Sbjct: 420  GTLQEGKSVEKGKDKEEKDKEKTKDPDKEKGKEKEKEKEKEKEKDTDKKGENEKEKLKGS 479

Query: 824  EGTSLDALLQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSR 645
            EGT+LDALLQRLPGCVSRDLID LTVEFCYLNSKSNRKRLVRALF+VPRTSLELLPYYSR
Sbjct: 480  EGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSR 539

Query: 644  LVATLATCMKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFV 465
            +VATL+TCMKD+ SMLL MLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKI+  G V
Sbjct: 540  MVATLSTCMKDVPSMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKISSPGLV 599

Query: 464  FICLKGCLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRH 285
            F CLK CLDDFTHHNIDVACNLLETCGRFLYRSPETT+RMANMLEILMRLKNVKNLDPRH
Sbjct: 600  FSCLKTCLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRH 659

Query: 284  STLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECE 105
            STLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLF+DL+KSSIEHVLRQLRKLPW ECE
Sbjct: 660  STLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFTDLDKSSIEHVLRQLRKLPWIECE 719

Query: 104  TYLLKCFLKVHKGKYSQVDLIASLTACLSRYHDE 3
            +YLLKCF+KVHKGKY Q+ LIASLTA LSRYHDE
Sbjct: 720  SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDE 753


>ref|XP_012449899.1| PREDICTED: regulator of nonsense transcripts UPF2 [Gossypium
            raimondii] gi|823234539|ref|XP_012449900.1| PREDICTED:
            regulator of nonsense transcripts UPF2 [Gossypium
            raimondii] gi|763800730|gb|KJB67685.1| hypothetical
            protein B456_010G203700 [Gossypium raimondii]
            gi|763800732|gb|KJB67687.1| hypothetical protein
            B456_010G203700 [Gossypium raimondii]
          Length = 1201

 Score = 1095 bits (2831), Expect = 0.0
 Identities = 572/754 (75%), Positives = 617/754 (81%), Gaps = 12/754 (1%)
 Frame = -1

Query: 2228 MDHPEDECRVPG----KQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MD+ EDE R  G    KQDDEE VARLEE KKS+E K+ LRQ+NLNPERPD+GFLRTLDS
Sbjct: 1    MDNQEDESRAGGEHHGKQDDEEAVARLEEIKKSIEGKVALRQTNLNPERPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEE KEG+MEELR VNLSKFVSEAV+AICDAKL++SDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEELKEGLMEELRSVNLSKFVSEAVSAICDAKLKSSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSL+QGLLK+F  GKSGD+LD D++ KAMKKRSTLKLLLELYFVGVIE+
Sbjct: 121  SLLHQRYKDFSPSLIQGLLKVFFPGKSGDDLDADRNLKAMKKRSTLKLLLELYFVGVIED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
             G+F+ IIKDLTS++HLKDRDAT TNL+LLASFARQ RVFLGL +SGQE QEEFFKGL I
Sbjct: 181  NGIFINIIKDLTSTEHLKDRDATQTNLTLLASFARQGRVFLGLPVSGQEIQEEFFKGLGI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            TADQ           YD   ELLQSEHA+LRQ+EHENAKILNAKGELSEENA+ YEK RK
Sbjct: 241  TADQKKTFRKAFNLYYDAVTELLQSEHASLRQMEHENAKILNAKGELSEENASSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYDHL+R VSSLAEALDMQPP+MPED HTTRVTTGDD SS  SGKESS LE +WDD+DTR
Sbjct: 301  SYDHLYRNVSSLAEALDMQPPVMPEDSHTTRVTTGDDASS-TSGKESSNLEAIWDDDDTR 359

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGESE+KA                         Q+A +  A  
Sbjct: 360  AFYECLPDLRAFVPAVLLGESESKASEQTSKAQEQPTESSSEADQSTPVAQDAVDISADS 419

Query: 980  EALQEG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGV 825
              LQEG                                            +NEKEKLKG 
Sbjct: 420  GTLQEGKSVEKGKDKEEKDKEKTKDPDKEKGKEKEKEKEKEKEKDTDKKGENEKEKLKGS 479

Query: 824  EGTSLDALLQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSR 645
            EGT+LDALLQRLPGCVSRDLID LTVEFCYLNSKSNRKRLVRALF+VPRTSLELLPYYSR
Sbjct: 480  EGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSR 539

Query: 644  LVATLATCMKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFV 465
            +VATL+TCMKD+ SMLL MLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKI+  G V
Sbjct: 540  MVATLSTCMKDVPSMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKISSPGLV 599

Query: 464  FICLKGCLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRH 285
            F CLK CLDDFTHHNIDVACNLLETCGRFLYRSPETT+RMANMLEILMRLKNVKNLDPRH
Sbjct: 600  FSCLKTCLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRH 659

Query: 284  STLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECE 105
            STLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLF+DL+KSSIEHVLRQLRKLPW ECE
Sbjct: 660  STLVENAYYLCKPPERSARVSKVRPPLHQYIRKLLFTDLDKSSIEHVLRQLRKLPWIECE 719

Query: 104  TYLLKCFLKVHKGKYSQVDLIASLTACLSRYHDE 3
            +YLLKCF+KVHKGKY Q+ LIASLTA LSRYHDE
Sbjct: 720  SYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDE 753


>ref|XP_002315268.1| hypothetical protein POPTR_0010s22310g [Populus trichocarpa]
            gi|222864308|gb|EEF01439.1| hypothetical protein
            POPTR_0010s22310g [Populus trichocarpa]
          Length = 1194

 Score = 1094 bits (2830), Expect = 0.0
 Identities = 570/746 (76%), Positives = 618/746 (82%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDECR----VPGKQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MDH EDE R     P K+DDEE VARLEE KKS+EAK+ LRQSNLNPERPD+GFLRTLDS
Sbjct: 1    MDHHEDESRGGSETPRKEDDEEAVARLEEMKKSIEAKVALRQSNLNPERPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEEQKEG+MEELR+VNLSKFVSEAVT+ICDAKLRTSDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEEQKEGLMEELRNVNLSKFVSEAVTSICDAKLRTSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSLVQGLLK+F   KSG++LDVDK+SKAMKKRSTLKLLLEL+FVGV E+
Sbjct: 121  SLLHQRYKDFSPSLVQGLLKVFFPVKSGEDLDVDKNSKAMKKRSTLKLLLELFFVGVTED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
            + VF+ IIKDLTS++HLKDRD T TNL+LLASFARQ RVFLGL LSGQE  EEFFKGLNI
Sbjct: 181  SSVFINIIKDLTSAEHLKDRDTTQTNLTLLASFARQGRVFLGLPLSGQEIHEEFFKGLNI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            T DQ           YD  AELLQS+HA+LRQ+EHENAKILNAKGELS+EN + YEK RK
Sbjct: 241  TTDQKKIFRKAFHAYYDAVAELLQSDHASLRQMEHENAKILNAKGELSDENVSSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYDHL+R VSSLAEAL MQPP+MPEDGHTTR+T+G+D SSPA+GK+SS LE +WDDEDTR
Sbjct: 301  SYDHLYRNVSSLAEALHMQPPVMPEDGHTTRLTSGEDISSPAAGKDSSVLEALWDDEDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE E KA                       + Q+  E  A  
Sbjct: 361  AFYECLPDLRAFVPAVLLGEVEPKA-NDHSVKTQDQQSELAPESDQGQSTQDMAEVTAES 419

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
              LQEG                                    +NEKEKLK +EGT+LDAL
Sbjct: 420  GTLQEG--KSTEKGKDKEEKDKEKVKDPEKEKGKEKDAERKGENEKEKLKSLEGTNLDAL 477

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTVEFCY NSKSNRK+LVRALF+VPRTSLELLPYYSR+VATL+TC
Sbjct: 478  LQRLPGCVSRDLIDQLTVEFCYFNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTC 537

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+S MLL +LEEEFNFLINKKDQMNIETKIRNIRFIGELCKF+IAPA  VF CLK CL
Sbjct: 538  MKDVSFMLLQLLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFRIAPASTVFSCLKACL 597

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 598  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 657

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARVSKVRPPL+QYIRKLLFSDL+KSSIEHVLRQLRKLPWSECE YLLKCF+
Sbjct: 658  YLCKPPERSARVSKVRPPLYQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEAYLLKCFM 717

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVHKGKY Q+ LIASLTA LSRYHDE
Sbjct: 718  KVHKGKYGQIHLIASLTAGLSRYHDE 743


>ref|XP_004296960.1| PREDICTED: regulator of nonsense transcripts UPF2 [Fragaria vesca
            subsp. vesca]
          Length = 1197

 Score = 1094 bits (2829), Expect = 0.0
 Identities = 563/748 (75%), Positives = 622/748 (83%), Gaps = 6/748 (0%)
 Frame = -1

Query: 2228 MDHPEDE------CRVPGKQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTL 2067
            MDH E+E          GKQDDEE VARLEE KKS+E+KM LRQSNLNPERPD+GFLRTL
Sbjct: 9    MDHNEEESGGGAGAEPHGKQDDEEAVARLEEMKKSIESKMALRQSNLNPERPDSGFLRTL 68

Query: 2066 DSSIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQ 1887
            DSSIKRNTAVIKKLKQINEEQ+EG+M++LR VNLSKFVSEAVTAICDAKLR+SDIQAAVQ
Sbjct: 69   DSSIKRNTAVIKKLKQINEEQREGLMDDLRSVNLSKFVSEAVTAICDAKLRSSDIQAAVQ 128

Query: 1886 ICSLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVI 1707
            ICSLLHQRYK+FSP+LVQGLLK+F  GKSGD+ D D+S +AMKKRSTLKLLLEL+FVGVI
Sbjct: 129  ICSLLHQRYKDFSPTLVQGLLKVFFPGKSGDDPDADRSLRAMKKRSTLKLLLELFFVGVI 188

Query: 1706 EEAGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGL 1527
            E+ G+FV +IKDLTS DHLKDR+ T TNL+LLASFARQ R+FLGL LSG E  EEFFKGL
Sbjct: 189  EDGGIFVNVIKDLTSGDHLKDRETTQTNLTLLASFARQGRMFLGLPLSGPEIYEEFFKGL 248

Query: 1526 NITADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQ 1347
            NIT DQ           Y+ AAELLQSEH +LRQ+EHENA+I+NAKGELS+++A+ YEK 
Sbjct: 249  NITPDQKKFFKKAFQTYYEAAAELLQSEHNSLRQMEHENARIINAKGELSDDSASSYEKL 308

Query: 1346 RKSYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDED 1167
            RKSYDHL+R VS+LAEALDMQPP+MPEDGHTTRVT+G+D SSPA+GK+SSALE +WDDED
Sbjct: 309  RKSYDHLYRNVSTLAEALDMQPPVMPEDGHTTRVTSGEDASSPAAGKDSSALEAIWDDED 368

Query: 1166 TRAFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCA 987
            TRAFYECLPDLRAFVPAVLLGE+E+K                        A +EA E  A
Sbjct: 369  TRAFYECLPDLRAFVPAVLLGEAESKVNEQSAKTQEQPTEPAAESDQNQQATEEAAEPSA 428

Query: 986  IGEALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLD 807
               ALQEG                                    +NEKEKLK +EGT+LD
Sbjct: 429  EVGALQEG-----KIREKGKDKEEKEKEKDKSKDADKEKGDRKGENEKEKLKSIEGTNLD 483

Query: 806  ALLQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLA 627
            ALLQRLPGCVSRDLID LTVEFCYLNSK+NRK+LVRA+F+VPRTSLELLPYYSR+VATL+
Sbjct: 484  ALLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRAVFNVPRTSLELLPYYSRMVATLS 543

Query: 626  TCMKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKG 447
            TCMKD+SSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKF+IAPAG VF CLK 
Sbjct: 544  TCMKDVSSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFRIAPAGLVFSCLKA 603

Query: 446  CLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVEN 267
            CLDDF+HHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVEN
Sbjct: 604  CLDDFSHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVEN 663

Query: 266  AYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKC 87
            AYYLCKPPERSARV+KVRPPLHQYIRKLLFSDL+KS++EHVLRQLRKLPW ECE YLLKC
Sbjct: 664  AYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTLEHVLRQLRKLPWGECEPYLLKC 723

Query: 86   FLKVHKGKYSQVDLIASLTACLSRYHDE 3
            FLKVHKGKY Q+ LIASLTA LSRYHDE
Sbjct: 724  FLKVHKGKYGQIHLIASLTAGLSRYHDE 751


>ref|XP_008233383.1| PREDICTED: regulator of nonsense transcripts UPF2 [Prunus mume]
            gi|645255191|ref|XP_008233384.1| PREDICTED: regulator of
            nonsense transcripts UPF2 [Prunus mume]
          Length = 1182

 Score = 1093 bits (2827), Expect = 0.0
 Identities = 565/746 (75%), Positives = 618/746 (82%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDECRVPG----KQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MDH E+E R  G    KQDDEE  ARLEE KKS+EAKM LRQSNLNPERPDTGFLRTLDS
Sbjct: 1    MDHHEEESRAGGEPHGKQDDEEAAARLEEIKKSIEAKMALRQSNLNPERPDTGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEEQ+EG+M++LR VNLSKFVSEAVTAICDAKLR+SDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEEQREGLMDDLRGVNLSKFVSEAVTAICDAKLRSSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSL+QGLLK+F  GKSGD+LDVDK+ +AMKKRSTLKLLLEL+FVGVIE+
Sbjct: 121  SLLHQRYKDFSPSLLQGLLKIFFPGKSGDDLDVDKNLRAMKKRSTLKLLLELFFVGVIED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
             G+FV IIKDLTS +HLKDRD T TNL+LLASFARQ R+F+ L LSG E  EEFFKGLNI
Sbjct: 181  GGIFVNIIKDLTSGEHLKDRDTTQTNLTLLASFARQGRMFINLPLSGPEIHEEFFKGLNI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            T +            YD AAELLQSEH +LRQ+EHEN+KILNAKGELS+EN + YEK RK
Sbjct: 241  TTEHKKFFRKAFQTYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSDENVSSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SY+ L+R VSSLAEALDMQPP+MPEDGHTTRVT+G+DTSSPA GK+SS LE +WDDEDTR
Sbjct: 301  SYEQLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEDTSSPAVGKDSSVLEAIWDDEDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E K+                         ++A E  A  
Sbjct: 361  AFYECLPDLRAFVPAVLLGEAE-KSNDQSAKTQEQPTEPTLESDQSQQTTEDAGEASADF 419

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
             ALQEG                                    +NEKEKLK +EGT+LDAL
Sbjct: 420  GALQEG-------KSIEKGKDKEEKDKEKIRDPDKEKGDRKGENEKEKLKSIEGTNLDAL 472

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTVEFCYLNSK+NRK+LVRA+F+VPRTSLELLPYYSR+VATL+TC
Sbjct: 473  LQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRAVFNVPRTSLELLPYYSRMVATLSTC 532

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+SSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAG VF CLK CL
Sbjct: 533  MKDVSSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACL 592

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 593  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 652

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARV+KVRPPLHQYIRKLLFSDL+KS+IEHVLRQLRKLPW ECE YLLKCF+
Sbjct: 653  YLCKPPERSARVTKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWGECEPYLLKCFM 712

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVHKGKY Q+ LIASLTA LSRYHD+
Sbjct: 713  KVHKGKYGQIHLIASLTAGLSRYHDQ 738


>ref|XP_011027031.1| PREDICTED: regulator of nonsense transcripts UPF2-like [Populus
            euphratica] gi|743843745|ref|XP_011027032.1| PREDICTED:
            regulator of nonsense transcripts UPF2-like [Populus
            euphratica]
          Length = 1189

 Score = 1092 bits (2824), Expect = 0.0
 Identities = 569/746 (76%), Positives = 619/746 (82%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDECR----VPGKQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MDH EDE R     P K+DDEE VARLEE KKS+EAK+ LRQSNLNPERPD+GFLRTLDS
Sbjct: 1    MDHHEDESRGGSETPRKEDDEEAVARLEEMKKSIEAKVALRQSNLNPERPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEEQ+EG+MEELR+VNLSKFVSEAVT+ICDAKLRTSDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEEQREGLMEELRNVNLSKFVSEAVTSICDAKLRTSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSLVQGLLK+F   KSG++LDVDK+SKAMKKRSTLKLLLEL+FVGV E+
Sbjct: 121  SLLHQRYKDFSPSLVQGLLKVFFPVKSGEDLDVDKNSKAMKKRSTLKLLLELFFVGVTED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
            + VF+ IIKDLTS++HLKDRD T TNL+LLASFARQ RVFLGL LSGQE  EEFFKGLNI
Sbjct: 181  SSVFINIIKDLTSAEHLKDRDTTQTNLTLLASFARQGRVFLGLPLSGQEIHEEFFKGLNI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            T DQ           YD  AELLQS+HA+LRQ+EHENAKILNAKGELS+EN + YEK RK
Sbjct: 241  TTDQKKIFRKAFHTYYDAVAELLQSDHASLRQMEHENAKILNAKGELSDENVSSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYDHL+R VSSLAEAL MQPP+MPEDGHTTR+T+G+D S PA+GK+SSALE +WDDEDTR
Sbjct: 301  SYDHLYRNVSSLAEALHMQPPVMPEDGHTTRLTSGEDISLPAAGKDSSALEALWDDEDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E+KA                       + Q+  E  A  
Sbjct: 361  AFYECLPDLRAFVPAVLLGEAESKA-NDHSVKTQDQQSELAPESDQGQSTQDMAEVTAES 419

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
              LQEG                                    +NEKEKLK +EGT+LDAL
Sbjct: 420  GILQEG--KSTEKGKDKEEKDKEKVKDPEKERGKEKDAERKGENEKEKLKSLEGTNLDAL 477

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTVEFCY NSKSNRK+LVRALF+VPRTSLELLPYYSR+VATL+TC
Sbjct: 478  LQRLPGCVSRDLIDQLTVEFCYFNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTC 537

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+S MLL MLEEEFNFLINKKDQMNIETKIRNIRFIGELCKF+IAPA  VF CLK CL
Sbjct: 538  MKDVSFMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFRIAPASTVFSCLKACL 597

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 598  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 657

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARVSKVRPPL+QYIRKLLFSDL+KSSIEHVLRQLRKLPWSECE YLLKCF+
Sbjct: 658  YLCKPPERSARVSKVRPPLYQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEAYLLKCFM 717

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVHKGKY Q+ LIASLTA LS YHDE
Sbjct: 718  KVHKGKYGQIHLIASLTAGLSCYHDE 743


>ref|XP_010253476.1| PREDICTED: regulator of nonsense transcripts UPF2 isoform X2 [Nelumbo
            nucifera]
          Length = 1193

 Score = 1092 bits (2824), Expect = 0.0
 Identities = 567/746 (76%), Positives = 611/746 (81%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDECRVPG----KQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MDHPEDECRV G    KQDDEE  ARL+EFKKSMEAK+ LRQSNLNPERPD+GFLRTLDS
Sbjct: 1    MDHPEDECRVGGEHHGKQDDEETAARLDEFKKSMEAKIALRQSNLNPERPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEEQ+E MM+ELR VNLSKFVSEAVTAICDAKLRTSDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEEQRESMMDELRSVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSL+QGLLK+F  GKSGD+LDVD+S KAMKKRSTLKLL+ELYFVGVIE+
Sbjct: 121  SLLHQRYKDFSPSLIQGLLKVFFPGKSGDDLDVDRSLKAMKKRSTLKLLMELYFVGVIED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
            A +F+ IIKDLTS +HLKDRD T  NLSLL SFARQ R+FLGL  SGQE  EEFFKGLNI
Sbjct: 181  ASIFINIIKDLTSLEHLKDRDTTQMNLSLLLSFARQGRIFLGLPQSGQEIHEEFFKGLNI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            TADQ           YD AAELLQSEH +LRQ+E+EN+KILNAKGELS+EN T YEK RK
Sbjct: 241  TADQKKIFKKAFYTYYDAAAELLQSEHTSLRQMENENSKILNAKGELSDENVTSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYD LFRGVSSLAEALDMQPP+MPED HTTRVTTG+D SSPA+GKESS LEP+WDDEDTR
Sbjct: 301  SYDQLFRGVSSLAEALDMQPPVMPEDSHTTRVTTGEDASSPAAGKESSVLEPLWDDEDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E+K                          Q+  E C   
Sbjct: 361  AFYECLPDLRAFVPAVLLGEAESKI-AEQSSKTQEQPTDSTSEADQGHVAQDGAEACVDS 419

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
               Q+G                                    + EKEK+KG+EGT+LDAL
Sbjct: 420  GPSQDG--KSDEKVKGKEERDKEKTKDSDKDKGKEKDSERKGETEKEKIKGLEGTNLDAL 477

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGC          VEFCYLNSKSNRKRLVRALF+VPRTSLELLPYYSR+VATL+TC
Sbjct: 478  LQRLPGC----------VEFCYLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTC 527

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+SSMLL ML+EEFNFLINKKDQMNIETKIRNIRF+GELCKF+IAP G VF CLK CL
Sbjct: 528  MKDVSSMLLQMLDEEFNFLINKKDQMNIETKIRNIRFVGELCKFRIAPGGLVFGCLKACL 587

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 588  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 647

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARVSKVRPPLHQYIRKLLF+DL+KS+IEHVLRQLRKLPWSECE YLLKCF+
Sbjct: 648  YLCKPPERSARVSKVRPPLHQYIRKLLFTDLDKSTIEHVLRQLRKLPWSECEDYLLKCFM 707

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVHKGKYSQV LIASLTA LSRYHDE
Sbjct: 708  KVHKGKYSQVHLIASLTAGLSRYHDE 733


>ref|XP_002312048.2| hypothetical protein POPTR_0008s04510g [Populus trichocarpa]
            gi|550332418|gb|EEE89415.2| hypothetical protein
            POPTR_0008s04510g [Populus trichocarpa]
          Length = 1171

 Score = 1090 bits (2820), Expect = 0.0
 Identities = 567/746 (76%), Positives = 621/746 (83%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDECR----VPGKQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MDH EDE R     P KQDDEE VARLEE KKS+EAK+ LRQSNLNPERPD+GFLRTLDS
Sbjct: 1    MDHHEDESRGGSVTPRKQDDEEAVARLEEMKKSIEAKVALRQSNLNPERPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEEQKEG+MEELR+VNLSKFVSEAVT+ICDAKLRTSDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEEQKEGLMEELRNVNLSKFVSEAVTSICDAKLRTSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSLVQGLLK+F  GKSG++LDVDK+SKAMKKRS+LKLLLELYFVGV E+
Sbjct: 121  SLLHQRYKDFSPSLVQGLLKVFFPGKSGEDLDVDKNSKAMKKRSSLKLLLELYFVGVTED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
            + +F+ IIKDLTS ++LKDRD T TNL+LLASFARQ RVFLGL LSGQE QEEF KGL+I
Sbjct: 181  SSIFINIIKDLTSIENLKDRDTTQTNLTLLASFARQGRVFLGLPLSGQETQEEFLKGLSI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            T DQ           YDV AELL+SEHA+LRQ+EHENAK+LNAKGELS++N + YEK RK
Sbjct: 241  TTDQKKIFRKAFHTYYDVVAELLKSEHASLRQMEHENAKMLNAKGELSDDNVSSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYD L+R VSSLAEALDMQPP+MPEDGHTTRVT+G+D SSPA+GK++S LE +WDDEDTR
Sbjct: 301  SYDQLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEDASSPAAGKDTSLLEALWDDEDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E KA                         Q+  E  A  
Sbjct: 361  AFYECLPDLRAFVPAVLLGEAEPKA-NEHSAKTQDQPSELAPESDQGQPTQDMAEVSAES 419

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
              LQEG                                    +NEKEKLK +EGT+LDAL
Sbjct: 420  GPLQEG--KSTEKGKDKEEKDKEKVKDSEKEKGKEKDAERKGENEKEKLKSLEGTNLDAL 477

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTV+FCYLNSKS+RK+LVRALF+VPRTSLELLPYYSR+VATL+TC
Sbjct: 478  LQRLPGCVSRDLIDQLTVDFCYLNSKSSRKKLVRALFNVPRTSLELLPYYSRMVATLSTC 537

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+SSMLL +LEEEFNFLINKKDQMNIETKIRNIRFIGELCKF+IAPA  VF CLK CL
Sbjct: 538  MKDVSSMLLQLLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFRIAPASTVFSCLKACL 597

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDFTHHNIDVACNLLETCGRFLYR+PETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 598  DDFTHHNIDVACNLLETCGRFLYRTPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 657

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARVSKVRPPL+QYIRKLLFSDL+KSSIEHVLRQLRKLPWSECE YLLKCF+
Sbjct: 658  YLCKPPERSARVSKVRPPLYQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEAYLLKCFM 717

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVHKGKY Q+ LIASLTA LSRYHDE
Sbjct: 718  KVHKGKYGQIHLIASLTAGLSRYHDE 743


>ref|XP_007220295.1| hypothetical protein PRUPE_ppa000441mg [Prunus persica]
            gi|462416757|gb|EMJ21494.1| hypothetical protein
            PRUPE_ppa000441mg [Prunus persica]
          Length = 1182

 Score = 1090 bits (2819), Expect = 0.0
 Identities = 563/746 (75%), Positives = 617/746 (82%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDECRVPG----KQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MDH E+E R  G    KQDDEE  AR EE KKS+EAKM LRQSNLNPERPDTGFLRTLDS
Sbjct: 1    MDHHEEESRAGGEPHGKQDDEEAAARREEIKKSIEAKMALRQSNLNPERPDTGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEEQ+EG+M++LR VNLSKFVSEAVTAICDAKLR+SDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEEQREGLMDDLRGVNLSKFVSEAVTAICDAKLRSSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSL+QGLLK+F  GKSGD+LDVDK+ +AMKKRSTLKLLLEL+FVGVIE+
Sbjct: 121  SLLHQRYKDFSPSLLQGLLKIFFPGKSGDDLDVDKNLRAMKKRSTLKLLLELFFVGVIED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
             G+FV IIKDLTS +HLKDRD T TNL+LLASFARQ R+F+ L LSG E  EEFFKGLNI
Sbjct: 181  GGIFVNIIKDLTSGEHLKDRDTTQTNLTLLASFARQGRMFINLPLSGPEIHEEFFKGLNI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            T +            YD AAELLQSEH +LRQ+EHEN+KILNAKGELS+EN + YEK RK
Sbjct: 241  TTEHKKFFRKAFQTYYDAAAELLQSEHTSLRQMEHENSKILNAKGELSDENVSSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SY+ L+R VSSLAEALDMQPP+MPEDGHTTRVT+G+D SSPA+GK+SS LE +WDDEDTR
Sbjct: 301  SYEQLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEDASSPAAGKDSSVLEAIWDDEDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E K+                         ++A E  A  
Sbjct: 361  AFYECLPDLRAFVPAVLLGEAE-KSNDQSAKTQEQPTEPTLESDQSQQTAEDAGEASADV 419

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
             ALQEG                                    +NEKEKLK +EGT+LDAL
Sbjct: 420  GALQEG-------KSIEKGKDKEEKDKEKIKDPDKEKGDRKGENEKEKLKSIEGTNLDAL 472

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTVEFCYLNSK+NRK+LVRA+F+VPRTSLELLPYYSR+VATL+TC
Sbjct: 473  LQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRAVFNVPRTSLELLPYYSRMVATLSTC 532

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+SSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAG VF CLK CL
Sbjct: 533  MKDVSSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACL 592

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 593  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 652

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARV+KVRPPLHQYIRKLLFSDL+KS+IEHVLRQLRKLPW ECE YLLKCF+
Sbjct: 653  YLCKPPERSARVTKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWGECEPYLLKCFM 712

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVHKGKY Q+ LIASLTA LSRYHD+
Sbjct: 713  KVHKGKYGQIHLIASLTAGLSRYHDQ 738


>ref|XP_011046308.1| PREDICTED: regulator of nonsense transcripts UPF2-like [Populus
            euphratica] gi|743779851|ref|XP_011047043.1| PREDICTED:
            regulator of nonsense transcripts UPF2-like [Populus
            euphratica] gi|743779855|ref|XP_011047799.1| PREDICTED:
            regulator of nonsense transcripts UPF2-like [Populus
            euphratica] gi|743779858|ref|XP_011048570.1| PREDICTED:
            regulator of nonsense transcripts UPF2-like [Populus
            euphratica]
          Length = 1189

 Score = 1087 bits (2810), Expect = 0.0
 Identities = 566/746 (75%), Positives = 617/746 (82%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDECR----VPGKQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            MDH EDE R     P KQDDEE VARLEE KKS+EAK+ LRQSNLNP+RPD+GFLRTLDS
Sbjct: 1    MDHHEDESRGGSVTPRKQDDEEAVARLEEMKKSIEAKVALRQSNLNPQRPDSGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKL+QINEEQKEG+MEELR+VNLSKFVSEAVT+ICDAKLRTSDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLRQINEEQKEGLMEELRNVNLSKFVSEAVTSICDAKLRTSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSPSLVQGLLK+F  GKSG++LDVDK+SKAMKKRSTLKLLLELYFVGV E+
Sbjct: 121  SLLHQRYKDFSPSLVQGLLKIFFPGKSGEDLDVDKNSKAMKKRSTLKLLLELYFVGVTED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
            + +F+ IIKDLTS ++LKDRD T TNL+LLASFARQ RVFLGL LSGQE QEEF KGL+I
Sbjct: 181  SSIFINIIKDLTSIENLKDRDTTQTNLTLLASFARQGRVFLGLPLSGQETQEEFLKGLSI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            T DQ           YDV AELLQSEHA+LRQ+EHENAK+LNAKGELS++N + YEK RK
Sbjct: 241  TTDQKKIFRKAFHTYYDVVAELLQSEHASLRQMEHENAKMLNAKGELSDDNVSSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SYD L+R VSSLAEALDMQPP+MPEDGHTTRVT+G+D SSPA+GK++S LE +WDDEDTR
Sbjct: 301  SYDQLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEDASSPAAGKDTSLLEALWDDEDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E KA                         Q+  E     
Sbjct: 361  AFYECLPDLRAFVPAVLLGEAEPKA-NEHSAKTQDQPSELAPESDQGQPTQDMAEVSTES 419

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
              LQEG                                      EKEKLK +EGT+LDAL
Sbjct: 420  GPLQEGKSTEKGKDKEEKDKEKVKDPEKEKGKEKDAERKGEI--EKEKLKSLEGTNLDAL 477

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTV+FCYLNSKS+RK+LVRALFSVPRTSLELLPYYSR+V+TL+TC
Sbjct: 478  LQRLPGCVSRDLIDQLTVDFCYLNSKSSRKKLVRALFSVPRTSLELLPYYSRMVSTLSTC 537

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+SSMLL MLEEEFN LINKKDQMNIETKIRNIRFIGELCKF+IAPA  VF CLK CL
Sbjct: 538  MKDVSSMLLQMLEEEFNSLINKKDQMNIETKIRNIRFIGELCKFRIAPASTVFSCLKACL 597

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 598  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 657

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARVSKVRPPL+QYIRKLLFSDL+KSSIEHVLRQLRKLPWSECE YLLKCF+
Sbjct: 658  YLCKPPERSARVSKVRPPLYQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEAYLLKCFM 717

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVHKGKY Q+ LIASLTA LSRYHDE
Sbjct: 718  KVHKGKYGQIHLIASLTAGLSRYHDE 743


>ref|XP_009378135.1| PREDICTED: regulator of nonsense transcripts UPF2 [Pyrus x
            bretschneideri] gi|694406689|ref|XP_009378136.1|
            PREDICTED: regulator of nonsense transcripts UPF2 [Pyrus
            x bretschneideri] gi|694406691|ref|XP_009378137.1|
            PREDICTED: regulator of nonsense transcripts UPF2 [Pyrus
            x bretschneideri]
          Length = 1185

 Score = 1083 bits (2801), Expect = 0.0
 Identities = 559/746 (74%), Positives = 617/746 (82%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDE----CRVPGKQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            M+H E+E        GKQDDEE  ARLEE KKS+EAKM  RQSNLNPERPDTGFLRTLDS
Sbjct: 1    MEHHEEEGGAGSEPHGKQDDEEAAARLEEVKKSIEAKMAFRQSNLNPERPDTGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEEQ+EG+M++LR VNLSKFVSEAVTAICDAKLR+SDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEEQREGLMDDLRGVNLSKFVSEAVTAICDAKLRSSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSP+L+QGLLK+F  GKSGD+L+ DK+ +AMKKRSTLKLL+EL+FVGVIE+
Sbjct: 121  SLLHQRYKDFSPTLLQGLLKVFFPGKSGDDLEADKNLRAMKKRSTLKLLVELFFVGVIED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
             GVFV IIKDLTS +HLKDRD T TNL+LLASFARQ R+FLGL LSG E  EEFFKGLNI
Sbjct: 181  GGVFVNIIKDLTSGEHLKDRDTTQTNLTLLASFARQGRMFLGLPLSGPEIHEEFFKGLNI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            T DQ           Y  AAELLQSEHA+LRQ+EHENAKILNAKGELS+E+ + YEK RK
Sbjct: 241  TTDQKKFFRKAFQTYYVAAAELLQSEHASLRQMEHENAKILNAKGELSDESVSSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SY+HL+R +SSLAEALDMQPP+MP+DGHTTRVT+G+D SS A+GK+SSALE +WDDEDTR
Sbjct: 301  SYEHLYRNISSLAEALDMQPPVMPDDGHTTRVTSGEDASSAAAGKDSSALEAIWDDEDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E+K+                         ++  E  A  
Sbjct: 361  AFYECLPDLRAFVPAVLLGEAESKSSDQSAKTQEQSTEPTLESDQSQQTTEDTGESSADV 420

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
             ALQEG                                    ++EKEKLK +EGT+LDAL
Sbjct: 421  GALQEG-------KTTEKGKDMEEKEKDKIKDPDKEKGDRKGEHEKEKLKSIEGTNLDAL 473

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTVEFCYLNSK+NRK+LVRA+F+VPRTSLELL YYSRLVATL+TC
Sbjct: 474  LQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRAVFNVPRTSLELLAYYSRLVATLSTC 533

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+SSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAG VF CLK CL
Sbjct: 534  MKDVSSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACL 593

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDF+HHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 594  DDFSHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 653

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARV+KVRPPLHQYIRKLLFSDL+KS+IEHVLRQLRKLPW ECE YLLKCFL
Sbjct: 654  YLCKPPERSARVTKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWGECEPYLLKCFL 713

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVH+GKY Q+ LIASLTA LSRYHDE
Sbjct: 714  KVHQGKYGQIHLIASLTAGLSRYHDE 739


>ref|XP_008354091.1| PREDICTED: regulator of nonsense transcripts UPF2-like [Malus
            domestica]
          Length = 1195

 Score = 1083 bits (2801), Expect = 0.0
 Identities = 560/746 (75%), Positives = 617/746 (82%), Gaps = 4/746 (0%)
 Frame = -1

Query: 2228 MDHPEDE----CRVPGKQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLDS 2061
            M+H E+E        GKQDDEE  ARLEE KKS+EAKM LRQSNLNPERPDTGFLRTLDS
Sbjct: 1    MEHHEEEGGAGSEPHGKQDDEEAAARLEEVKKSIEAKMALRQSNLNPERPDTGFLRTLDS 60

Query: 2060 SIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQIC 1881
            SIKRNTAVIKKLKQINEEQ+EG+M++LR VNLSKFVSEAVTAICDAKLR+SDIQAAVQIC
Sbjct: 61   SIKRNTAVIKKLKQINEEQREGLMDDLRGVNLSKFVSEAVTAICDAKLRSSDIQAAVQIC 120

Query: 1880 SLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIEE 1701
            SLLHQRYK+FSP+L+QGLLK+F  GKSGD+L+ DK+ +AMKKRSTLKLL+EL+FVGVIE+
Sbjct: 121  SLLHQRYKDFSPTLLQGLLKVFFPGKSGDDLEADKNLRAMKKRSTLKLLVELFFVGVIED 180

Query: 1700 AGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLNI 1521
             GVF+ IIKDLTS +HLKDRD T TNL+LLASFARQ R+FLGL LSG E  EEFFKGL+I
Sbjct: 181  GGVFLNIIKDLTSGEHLKDRDTTQTNLTLLASFARQGRMFLGLPLSGPEIHEEFFKGLSI 240

Query: 1520 TADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQRK 1341
            T DQ           Y  AAELLQSEH +LRQ+EHENAKILNAKGELS+E+ + YEK RK
Sbjct: 241  TTDQKKFFRKAFQTYYVAAAELLQSEHTSLRQMEHENAKILNAKGELSDESVSSYEKLRK 300

Query: 1340 SYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDTR 1161
            SY+HL+R VSSLAEALDMQPP+MPEDGHTTRVT+G+D SS A+GK+SSALE +WDDEDTR
Sbjct: 301  SYEHLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEDASSAAAGKDSSALEAIWDDEDTR 360

Query: 1160 AFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAIG 981
            AFYECLPDLRAFVPAVLLGE+E+K+                         ++  E  A  
Sbjct: 361  AFYECLPDLRAFVPAVLLGEAESKSSDQSAKTQEQSTEPALESDQSQQTTEDTGEASADV 420

Query: 980  EALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDAL 801
             ALQEG                                    ++EKEKLK +EGT+LDAL
Sbjct: 421  GALQEG-------KTIEKGKDKEEKEKDKIKDPDKEKGDRKGEHEKEKLKSIEGTNLDAL 473

Query: 800  LQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLATC 621
            LQRLPGCVSRDLID LTVEFCYLNSK+NRK+LVRA+F+VPRTSLELL YYSRLVATL+TC
Sbjct: 474  LQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRAVFNVPRTSLELLAYYSRLVATLSTC 533

Query: 620  MKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGCL 441
            MKD+SSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAG VF CLK CL
Sbjct: 534  MKDVSSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACL 593

Query: 440  DDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 261
            DDF+HHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY
Sbjct: 594  DDFSHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAY 653

Query: 260  YLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCFL 81
            YLCKPPERSARV+KVRPPLHQYIRKLLFSDL+KS+IEHVLRQLRKLPW ECE YLLKCFL
Sbjct: 654  YLCKPPERSARVTKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWGECEPYLLKCFL 713

Query: 80   KVHKGKYSQVDLIASLTACLSRYHDE 3
            KVHKGKY Q+ LIASLTA LSRYHDE
Sbjct: 714  KVHKGKYGQIHLIASLTAGLSRYHDE 739


>ref|XP_010087872.1| Regulator of nonsense transcripts 2 [Morus notabilis]
            gi|587839731|gb|EXB30382.1| Regulator of nonsense
            transcripts 2 [Morus notabilis]
          Length = 1191

 Score = 1082 bits (2798), Expect = 0.0
 Identities = 558/747 (74%), Positives = 616/747 (82%), Gaps = 5/747 (0%)
 Frame = -1

Query: 2228 MDHPEDECRVP-----GKQDDEENVARLEEFKKSMEAKMTLRQSNLNPERPDTGFLRTLD 2064
            MD  EDE R       GKQDDEE  ARLEE KKS+EAKM LRQSNLN ERPD+GFLRTLD
Sbjct: 1    MDQQEDEGRAGTEQHHGKQDDEEAAARLEEIKKSIEAKMVLRQSNLNAERPDSGFLRTLD 60

Query: 2063 SSIKRNTAVIKKLKQINEEQKEGMMEELRHVNLSKFVSEAVTAICDAKLRTSDIQAAVQI 1884
            SSIKRNTAVIKKLKQINEEQ+EG+++ELR VNLSKFVSEAVT+ICDAKLRTSDIQAAVQI
Sbjct: 61   SSIKRNTAVIKKLKQINEEQREGLLDELRSVNLSKFVSEAVTSICDAKLRTSDIQAAVQI 120

Query: 1883 CSLLHQRYKEFSPSLVQGLLKLFSSGKSGDELDVDKSSKAMKKRSTLKLLLELYFVGVIE 1704
            CSLLHQRYK+FSPSL+QGLLK+F  GKSGD+ D +++ KAMKKRSTLKLLLELYFVGVIE
Sbjct: 121  CSLLHQRYKDFSPSLIQGLLKVFFPGKSGDDSDTERNLKAMKKRSTLKLLLELYFVGVIE 180

Query: 1703 EAGVFVTIIKDLTSSDHLKDRDATSTNLSLLASFARQARVFLGLSLSGQEFQEEFFKGLN 1524
            ++G+FV IIKDLTS++HLKDRD T TNL+LLASF+RQ R+FLGL LSGQE  EE FKGLN
Sbjct: 181  DSGIFVNIIKDLTSTEHLKDRDTTQTNLTLLASFSRQGRIFLGLLLSGQEIYEELFKGLN 240

Query: 1523 ITADQXXXXXXXXXXXYDVAAELLQSEHAALRQLEHENAKILNAKGELSEENATLYEKQR 1344
            ITADQ           YD A ELLQSEHA+LRQLEHENAKILNAKGELS+ENAT YEK R
Sbjct: 241  ITADQKKLFRKALYSYYDAAVELLQSEHASLRQLEHENAKILNAKGELSDENATSYEKLR 300

Query: 1343 KSYDHLFRGVSSLAEALDMQPPMMPEDGHTTRVTTGDDTSSPASGKESSALEPVWDDEDT 1164
            KSYD+ +R ++SLAEALD QPP+MPEDGHTTRVT+G+DTSS A+GK+SS +E +WDDEDT
Sbjct: 301  KSYDNFYRNITSLAEALDTQPPVMPEDGHTTRVTSGEDTSSTAAGKDSSVVEALWDDEDT 360

Query: 1163 RAFYECLPDLRAFVPAVLLGESETKAPXXXXXXXXXXXXXXXXXXXXXXAVQEATEGCAI 984
            RAFYECLPDLRAFVPAVLLGE+E+K                        A Q+  E    
Sbjct: 361  RAFYECLPDLRAFVPAVLLGETESKLNEQSVKTQEQPTEPAPESDQGQQATQDTGEVSTD 420

Query: 983  GEALQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEKEKLKGVEGTSLDA 804
               LQEG                                    + EKEKLK +EGT+L+A
Sbjct: 421  SGVLQEG--KSIEKGKEKEEKDREKSKDPEKEKGKEKDTDRKGETEKEKLKSLEGTNLEA 478

Query: 803  LLQRLPGCVSRDLIDHLTVEFCYLNSKSNRKRLVRALFSVPRTSLELLPYYSRLVATLAT 624
            LLQRLPGCVSRDLID LTVEFCYLNSK+NRK+LVRALF+VPRTSLELLPYYSR+VATL+T
Sbjct: 479  LLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRALFNVPRTSLELLPYYSRMVATLST 538

Query: 623  CMKDISSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGFVFICLKGC 444
            CMKD++SMLL MLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAP+G VF CLK C
Sbjct: 539  CMKDVASMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPSGLVFSCLKAC 598

Query: 443  LDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENA 264
            LDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENA
Sbjct: 599  LDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENA 658

Query: 263  YYLCKPPERSARVSKVRPPLHQYIRKLLFSDLNKSSIEHVLRQLRKLPWSECETYLLKCF 84
            YYLCKPPERSAR++KVRPPLHQYIRKLLFSDL+KS+IEHVLRQLRKLPWS+CE YLLKCF
Sbjct: 659  YYLCKPPERSARIAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWSDCEPYLLKCF 718

Query: 83   LKVHKGKYSQVDLIASLTACLSRYHDE 3
            +KVHKGKY Q+ LIASLTA LSRYHD+
Sbjct: 719  MKVHKGKYGQIHLIASLTAGLSRYHDD 745