BLASTX nr result

ID: Papaver31_contig00003345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00003345
         (999 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KMZ56712.1| 50S ribosomal protein 6, chloroplastic [Zostera m...    84   2e-13
ref|XP_009762288.1| PREDICTED: 50S ribosomal protein 6, chloropl...    82   7e-13
ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloropl...    82   9e-13
ref|XP_012068126.1| PREDICTED: 50S ribosomal protein 6, chloropl...    81   1e-12
ref|XP_013622786.1| PREDICTED: 50S ribosomal protein 6, chloropl...    81   1e-12
gb|KDP41555.1| hypothetical protein JCGZ_15962 [Jatropha curcas]       81   1e-12
ref|XP_009595726.1| PREDICTED: 50S ribosomal protein 6, chloropl...    79   6e-12
ref|XP_010692650.1| PREDICTED: 50S ribosomal protein 6, chloropl...    78   1e-11
ref|XP_009131614.1| PREDICTED: 50S ribosomal protein 6, chloropl...    78   1e-11
ref|XP_004238050.1| PREDICTED: 50S ribosomal protein 6, chloropl...    78   1e-11
ref|XP_013738781.1| PREDICTED: 50S ribosomal protein 6, chloropl...    77   2e-11
ref|XP_013612634.1| PREDICTED: 50S ribosomal protein 6, chloropl...    77   2e-11
ref|XP_013619512.1| PREDICTED: 50S ribosomal protein 6, chloropl...    77   2e-11
ref|XP_010453990.1| PREDICTED: 50S ribosomal protein 6, chloropl...    77   2e-11
ref|XP_009121044.1| PREDICTED: 50S ribosomal protein 6, chloropl...    77   2e-11
ref|XP_013729859.1| PREDICTED: 50S ribosomal protein 6, chloropl...    77   2e-11
emb|CDX85437.1| BnaA02g03760D [Brassica napus]                         77   2e-11
emb|CDY16880.1| BnaC09g40070D [Brassica napus]                         77   2e-11
ref|XP_013680684.1| PREDICTED: 50S ribosomal protein 6, chloropl...    77   2e-11
emb|CDY39717.1| BnaA04g07180D [Brassica napus]                         77   2e-11

>gb|KMZ56712.1| 50S ribosomal protein 6, chloroplastic [Zostera marina]
          Length = 122

 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 38/57 (66%), Positives = 46/57 (80%)
 Frame = -2

Query: 842 GVNNDLMMMPTGRVTMPMIECSSRPQKKGTAHHRKTRPKKSQPWDIKRGKTIYPPLP 672
           GV  + +MM  G+  + ++ECSSRPQKK TAHHRKTRPKKSQPWDI+RG T+YP LP
Sbjct: 29  GVGVERVMMGFGKTGL-VVECSSRPQKKSTAHHRKTRPKKSQPWDIRRGPTVYPVLP 84


>ref|XP_009762288.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Nicotiana
           sylvestris]
          Length = 105

 Score = 82.0 bits (201), Expect = 7e-13
 Identities = 45/87 (51%), Positives = 54/87 (62%)
 Frame = -2

Query: 929 SGIFGARLGAVILPKQQQQQSNYSTVGDVGVNNDLMMMPTGRVTMPMIECSSRPQKKGTA 750
           S IFG ++   +LP+     S  ST G  G    L   P   V    IECSSRPQKK TA
Sbjct: 4   SAIFGLKMA--VLPRS----STVSTTGFYGGATKLAAAPKS-VGGLAIECSSRPQKKATA 56

Query: 749 HHRKTRPKKSQPWDIKRGKTIYPPLPA 669
           HH+KTRP+K+Q WDI+RG  +YPPLPA
Sbjct: 57  HHKKTRPRKTQAWDIRRGPAVYPPLPA 83


>ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Solanum
           tuberosum]
          Length = 111

 Score = 81.6 bits (200), Expect = 9e-13
 Identities = 45/86 (52%), Positives = 55/86 (63%)
 Frame = -2

Query: 929 SGIFGARLGAVILPKQQQQQSNYSTVGDVGVNNDLMMMPTGRVTMPMIECSSRPQKKGTA 750
           S IFG ++  V+LP+     S  ST G  G    L   PT  V   +IECSSRPQKK TA
Sbjct: 4   SAIFGLQM--VVLPRS----STVSTTGFTGGATRLAAAPTS-VGGLVIECSSRPQKKATA 56

Query: 749 HHRKTRPKKSQPWDIKRGKTIYPPLP 672
           HH+KTRP+K+Q WDI+RG  +Y PLP
Sbjct: 57  HHKKTRPRKTQAWDIRRGPAVYAPLP 82


>ref|XP_012068126.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Jatropha curcas]
          Length = 126

 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 45/95 (47%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
 Frame = -2

Query: 941 MSICSGIFGARLGAVILPKQ-----QQQQSNYSTVGDVGVNNDLMMMPTGRVTMPMIECS 777
           MS+ S IFG+ +  ++LPK      Q  Q     +  VG    L+           IECS
Sbjct: 1   MSVSSSIFGSPV--LLLPKSSSFKPQNAQIQSPMITTVGYGGGLL-----------IECS 47

Query: 776 SRPQKKGTAHHRKTRPKKSQPWDIKRGKTIYPPLP 672
           SRP+KK T+HH KTRP+KSQPWDIKR  T+YPPLP
Sbjct: 48  SRPKKKATSHHMKTRPRKSQPWDIKRKPTVYPPLP 82


>ref|XP_013622786.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Brassica
           oleracea var. oleracea] gi|923780411|ref|XP_013681812.1|
           PREDICTED: 50S ribosomal protein 6, chloroplastic
           [Brassica napus] gi|674962777|emb|CDX70780.1|
           BnaC03g08640D [Brassica napus]
          Length = 109

 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 44/86 (51%), Positives = 52/86 (60%)
 Frame = -2

Query: 929 SGIFGARLGAVILPKQQQQQSNYSTVGDVGVNNDLMMMPTGRVTMPMIECSSRPQKKGTA 750
           S IFG  + A +      +Q     +G+ GV   L M+         IECSSRPQKK TA
Sbjct: 4   SAIFGTGI-ATVASSPALRQFQVPKLGNGGVGGGLGMV---------IECSSRPQKKSTA 53

Query: 749 HHRKTRPKKSQPWDIKRGKTIYPPLP 672
           HHRKTRPKK+QPWDIKR  T+Y PLP
Sbjct: 54  HHRKTRPKKTQPWDIKRKPTVYAPLP 79


>gb|KDP41555.1| hypothetical protein JCGZ_15962 [Jatropha curcas]
          Length = 122

 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 45/95 (47%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
 Frame = -2

Query: 941 MSICSGIFGARLGAVILPKQ-----QQQQSNYSTVGDVGVNNDLMMMPTGRVTMPMIECS 777
           MS+ S IFG+ +  ++LPK      Q  Q     +  VG    L+           IECS
Sbjct: 1   MSVSSSIFGSPV--LLLPKSSSFKPQNAQIQSPMITTVGYGGGLL-----------IECS 47

Query: 776 SRPQKKGTAHHRKTRPKKSQPWDIKRGKTIYPPLP 672
           SRP+KK T+HH KTRP+KSQPWDIKR  T+YPPLP
Sbjct: 48  SRPKKKATSHHMKTRPRKSQPWDIKRKPTVYPPLP 82


>ref|XP_009595726.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Nicotiana
           tomentosiformis]
          Length = 109

 Score = 79.0 bits (193), Expect = 6e-12
 Identities = 43/86 (50%), Positives = 53/86 (61%)
 Frame = -2

Query: 929 SGIFGARLGAVILPKQQQQQSNYSTVGDVGVNNDLMMMPTGRVTMPMIECSSRPQKKGTA 750
           S IFG ++   +LP+     S  ST G  G    L   P     +  IECSSRPQKK TA
Sbjct: 4   SAIFGLKMA--VLPRS----STASTTGLYGGATKLAAAPKSFGGLA-IECSSRPQKKATA 56

Query: 749 HHRKTRPKKSQPWDIKRGKTIYPPLP 672
           HH+KTRP+K+Q WDI+RG  +YPPLP
Sbjct: 57  HHKKTRPRKTQAWDIRRGPAVYPPLP 82


>ref|XP_010692650.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Beta vulgaris
           subsp. vulgaris] gi|870847272|gb|KMS99666.1|
           hypothetical protein BVRB_1g021720 [Beta vulgaris subsp.
           vulgaris]
          Length = 103

 Score = 78.2 bits (191), Expect = 1e-11
 Identities = 42/86 (48%), Positives = 49/86 (56%)
 Frame = -2

Query: 929 SGIFGARLGAVILPKQQQQQSNYSTVGDVGVNNDLMMMPTGRVTMPMIECSSRPQKKGTA 750
           S IFG R+ A  +P     +        VGV               +IECSSRPQKK TA
Sbjct: 4   SAIFGTRIAA--MPSMVSSRGVKMQPSSVGV---------------VIECSSRPQKKATA 46

Query: 749 HHRKTRPKKSQPWDIKRGKTIYPPLP 672
           HHRKTRP+K+QPWDIKR  T+YP LP
Sbjct: 47  HHRKTRPRKTQPWDIKRRPTVYPALP 72


>ref|XP_009131614.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Brassica rapa]
          Length = 113

 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 43/86 (50%), Positives = 48/86 (55%)
 Frame = -2

Query: 929 SGIFGARLGAVILPKQQQQQSNYSTVGDVGVNNDLMMMPTGRVTMPMIECSSRPQKKGTA 750
           S IFG  +  V      +Q          GV   L M+         IECSSRPQKK TA
Sbjct: 4   SAIFGTGIATVASSPALRQFQVPKLGNGEGVGGGLGMV---------IECSSRPQKKSTA 54

Query: 749 HHRKTRPKKSQPWDIKRGKTIYPPLP 672
           HHRKTRPKK+QPWDIKR  T+Y PLP
Sbjct: 55  HHRKTRPKKTQPWDIKRKPTVYAPLP 80


>ref|XP_004238050.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Solanum
           lycopersicum]
          Length = 111

 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 42/86 (48%), Positives = 53/86 (61%)
 Frame = -2

Query: 929 SGIFGARLGAVILPKQQQQQSNYSTVGDVGVNNDLMMMPTGRVTMPMIECSSRPQKKGTA 750
           S IFG ++   +LP+     S  S  G  G    L   PT  +   +IECSSRPQKK TA
Sbjct: 4   SAIFGLQMA--VLPRS----STVSATGFTGGATRLASAPTS-IGGLVIECSSRPQKKATA 56

Query: 749 HHRKTRPKKSQPWDIKRGKTIYPPLP 672
           HH+KTRP+K+Q WDI+RG  +Y PLP
Sbjct: 57  HHKKTRPRKTQAWDIRRGPAVYAPLP 82


>ref|XP_013738781.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Brassica
           napus]
          Length = 167

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -2

Query: 791 MIECSSRPQKKGTAHHRKTRPKKSQPWDIKRGKTIYPPLP 672
           +IECSSRPQKK TAHHRKTRPKK+QPWDIKR  T+Y PLP
Sbjct: 41  VIECSSRPQKKSTAHHRKTRPKKTQPWDIKRKPTVYAPLP 80


>ref|XP_013612634.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Brassica
           oleracea var. oleracea]
          Length = 110

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -2

Query: 791 MIECSSRPQKKGTAHHRKTRPKKSQPWDIKRGKTIYPPLP 672
           +IECSSRPQKK TAHHRKTRPKK+QPWDIKR  T+Y PLP
Sbjct: 37  VIECSSRPQKKSTAHHRKTRPKKTQPWDIKRKPTVYAPLP 76


>ref|XP_013619512.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Brassica
           oleracea var. oleracea]
          Length = 106

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -2

Query: 791 MIECSSRPQKKGTAHHRKTRPKKSQPWDIKRGKTIYPPLP 672
           +IECSSRPQKK TAHHRKTRPKK+QPWDIKR  T+Y PLP
Sbjct: 37  VIECSSRPQKKSTAHHRKTRPKKTQPWDIKRKPTVYAPLP 76


>ref|XP_010453990.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Camelina
           sativa]
          Length = 113

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 42/86 (48%), Positives = 51/86 (59%)
 Frame = -2

Query: 929 SGIFGARLGAVILPKQQQQQSNYSTVGDVGVNNDLMMMPTGRVTMPMIECSSRPQKKGTA 750
           S IFG  +  V       +Q     +G+ GV   L M+         IECSSRPQKK TA
Sbjct: 4   SAIFGTGIVTVAAASPVLRQFQVPKLGN-GVGGGLGMV---------IECSSRPQKKSTA 53

Query: 749 HHRKTRPKKSQPWDIKRGKTIYPPLP 672
           HHRK+RPKK+QPWD+KR  T+Y PLP
Sbjct: 54  HHRKSRPKKTQPWDVKRKPTVYAPLP 79


>ref|XP_009121044.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Brassica
           rapa]
          Length = 110

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -2

Query: 791 MIECSSRPQKKGTAHHRKTRPKKSQPWDIKRGKTIYPPLP 672
           +IECSSRPQKK TAHHRKTRPKK+QPWDIKR  T+Y PLP
Sbjct: 37  VIECSSRPQKKSTAHHRKTRPKKTQPWDIKRKPTVYAPLP 76


>ref|XP_013729859.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Brassica
           napus] gi|674955184|emb|CDX78764.1| BnaA03g06760D
           [Brassica napus]
          Length = 112

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -2

Query: 791 MIECSSRPQKKGTAHHRKTRPKKSQPWDIKRGKTIYPPLP 672
           +IECSSRPQKK TAHHRKTRPKK+QPWDIKR  T+Y PLP
Sbjct: 41  VIECSSRPQKKSTAHHRKTRPKKTQPWDIKRKPTVYAPLP 80


>emb|CDX85437.1| BnaA02g03760D [Brassica napus]
          Length = 106

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -2

Query: 791 MIECSSRPQKKGTAHHRKTRPKKSQPWDIKRGKTIYPPLP 672
           +IECSSRPQKK TAHHRKTRPKK+QPWDIKR  T+Y PLP
Sbjct: 37  VIECSSRPQKKSTAHHRKTRPKKTQPWDIKRKPTVYAPLP 76


>emb|CDY16880.1| BnaC09g40070D [Brassica napus]
          Length = 110

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -2

Query: 791 MIECSSRPQKKGTAHHRKTRPKKSQPWDIKRGKTIYPPLP 672
           +IECSSRPQKK TAHHRKTRPKK+QPWDIKR  T+Y PLP
Sbjct: 37  VIECSSRPQKKSTAHHRKTRPKKTQPWDIKRKPTVYAPLP 76


>ref|XP_013680684.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Brassica
           napus] gi|674894366|emb|CDY38465.1| BnaA10g16930D
           [Brassica napus]
          Length = 110

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -2

Query: 791 MIECSSRPQKKGTAHHRKTRPKKSQPWDIKRGKTIYPPLP 672
           +IECSSRPQKK TAHHRKTRPKK+QPWDIKR  T+Y PLP
Sbjct: 37  VIECSSRPQKKSTAHHRKTRPKKTQPWDIKRKPTVYAPLP 76


>emb|CDY39717.1| BnaA04g07180D [Brassica napus]
          Length = 106

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -2

Query: 791 MIECSSRPQKKGTAHHRKTRPKKSQPWDIKRGKTIYPPLP 672
           +IECSSRPQKK TAHHRKTRPKK+QPWDIKR  T+Y PLP
Sbjct: 37  VIECSSRPQKKSTAHHRKTRPKKTQPWDIKRKPTVYAPLP 76


Top