BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00001875
         (3281 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38027.3| unnamed protein product [Vitis vinifera]              824   0.0  
ref|XP_010647688.1| PREDICTED: RNA-binding protein 28 isoform X1...   804   0.0  
ref|XP_010647689.1| PREDICTED: RNA-binding protein 28 isoform X2...   801   0.0  
ref|XP_010254678.1| PREDICTED: RNA-binding protein 28 isoform X2...   760   0.0  
ref|XP_010254677.1| PREDICTED: RNA-binding protein 28 isoform X1...   759   0.0  
ref|XP_011047777.1| PREDICTED: RNA-binding protein 28 isoform X3...   735   0.0  
ref|XP_006487344.1| PREDICTED: RNA-binding protein 28-like isofo...   733   0.0  
ref|XP_011047784.1| PREDICTED: RNA-binding protein 28 isoform X4...   733   0.0  
ref|XP_011047769.1| PREDICTED: RNA-binding protein 28 isoform X2...   731   0.0  
ref|XP_011047760.1| PREDICTED: RNA-binding protein 28 isoform X1...   731   0.0  
ref|XP_012463899.1| PREDICTED: RNA-binding protein 28 [Gossypium...   724   0.0  
ref|XP_006487346.1| PREDICTED: RNA-binding protein 28-like isofo...   724   0.0  
ref|XP_006423392.1| hypothetical protein CICLE_v10027768mg [Citr...   723   0.0  
gb|KJB79121.1| hypothetical protein B456_013G034200 [Gossypium r...   717   0.0  
ref|XP_002313773.2| RNA recognition motif-containing family prot...   716   0.0  
ref|XP_012067208.1| PREDICTED: RNA-binding protein 28 [Jatropha ...   716   0.0  
ref|XP_007042088.1| RNA-binding family protein, putative [Theobr...   716   0.0  
ref|XP_010028624.1| PREDICTED: RNA-binding protein 28 [Eucalyptu...   715   0.0  
gb|KJB79122.1| hypothetical protein B456_013G034200 [Gossypium r...   714   0.0  
gb|KHG15251.1| RNA-binding 28 [Gossypium arboreum]                    714   0.0  

>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  824 bits (2128), Expect = 0.0
 Identities = 472/908 (51%), Positives = 585/908 (64%), Gaps = 99/908 (10%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            H PS + VSN P SFT+ QL +TFSD GP ++RCFMV +KGS  HRG GFVQF   EDA 
Sbjct: 16   HCPSTVFVSNFPYSFTNSQLEETFSDVGP-IRRCFMVTQKGSTEHRGFGFVQFAVKEDAN 74

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNADD----------------QGT 2122
             A ELKNG+ +GG+KI V+LA  R  L+QRR K N+   DD                QG 
Sbjct: 75   RAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQ---DDIIKTRTEKDSSSEVVKQGH 131

Query: 2121 A-------------KALVPLDIVATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKEV 1981
            A             KAL P    A KG  SEKQRVARTVIFGGL NAD+AE V  RA+EV
Sbjct: 132  ASDLQEIEKHVELRKALKPCTDQADKGSFSEKQRVARTVIFGGLLNADMAEVVHLRAREV 191

Query: 1980 EKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGASV 1801
                 V SV YPLPK++LE H L++DGCK+DA+AVLY+SVK A  +V+ LHQ+EIKG  V
Sbjct: 192  G---TVCSVTYPLPKEELEHHGLSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIV 248

Query: 1800 WARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFAF 1621
            WARQLGGEGSKT+KWKLIVRN+PF+AK  EIK++FSSAGFVW+  IPQ  +TGLS+GFAF
Sbjct: 249  WARQLGGEGSKTQKWKLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAF 308

Query: 1620 ITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNG-LQHREEEDE 1444
            + FT KQDAENAI+K NG+  G RPIAVDWAVPKKIYITGAN V + ++G L  R+ E +
Sbjct: 309  VKFTSKQDAENAIQKFNGEKIGKRPIAVDWAVPKKIYITGANPVVASEDGQLNGRDGEGD 368

Query: 1443 TSNDNIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMIT 1264
            T +D++ED     D K   PQ   +A ++S+ T         DF +E DIA KV  N+IT
Sbjct: 369  TDSDDLEDDTTDIDNKVPHPQGVGSAPDDSNTTEKEVMPTEFDFNEEADIARKVLKNLIT 428

Query: 1263 SEGKGNLDS-------IGEDSALPPSKELTTTMEKAAVRVKPKWPGMTEHTEHAKMEEQ- 1108
            S  KG L S       +  D  +   K+ +   EKA+   +P+    ++      +E + 
Sbjct: 429  SSAKGTLPSSSGGPTDLNFDETIDVLKKTSNESEKASDVTEPENSSKSKLLNLRPIESED 488

Query: 1107 --QRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXXXXX 934
              QRT+FI NLPFD   E+VKQ+FS+FG+VQSF+PVLH+VT+RP GTGFLKF+T      
Sbjct: 489  DLQRTIFISNLPFDIDKEEVKQQFSKFGEVQSFVPVLHQVTKRPKGTGFLKFNTVAAADA 548

Query: 933  XXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGIILEG 754
                   T    I LKGRQLT  KA DKKSAHD +L K+K E  D RNLYLAKEG+I+EG
Sbjct: 549  AVSAANPTSSLGIFLKGRQLTALKALDKKSAHDKELKKSKPEERDHRNLYLAKEGLIVEG 608

Query: 753  SPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFVDAV 574
            +PAAEGVS+ DMSKRH+L + K+ KL+SPNFHVSRTRLI+YNLP ++++K++KK+ +DAV
Sbjct: 609  TPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRTRLIIYNLPKSMTEKEVKKLCIDAV 668

Query: 573  LSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALRVLNNNPETFG 397
             SRA+KQ P+I+QIKFL + K  K  TKN+SR VAFI+FTEHQHALVALRVLNNNPETFG
Sbjct: 669  TSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAFIEFTEHQHALVALRVLNNNPETFG 728

Query: 396  PERRPIIEFALDNIQTLKLRQRKLAYWS-------------------TEKPNKKVSSRLN 274
            PE RPI+EFALDNIQTL+ R+ KL  +                       PNKK+ SR  
Sbjct: 729  PEHRPIVEFALDNIQTLRQRRAKLEAYQQINHGYPEDLQPNDDPNTPEASPNKKMKSRKR 788

Query: 273  S-------------KSADAPELK--------------------------SEDAEMVQKKR 211
                             D PE K                          SE++ M+ KKR
Sbjct: 789  KSRDNDGPLKTSEPNEGDEPEDKVIKGAPDDEKPLKAESTISKARNSKSSEESNMLPKKR 848

Query: 210  KFQGKINLEQPRKGKFPNKTKKRSKTGGDEGVDKLDVLVEQYRSKFSQHIVYKTAGEKQG 31
            K Q  I +++ +  K   +T++     G   +DKLD+LVEQYR+KFSQ    KT G+KQG
Sbjct: 849  KLQEHIAVQEGKSPKQKTRTRRSKDPSGQVILDKLDMLVEQYRAKFSQQTDDKTDGQKQG 908

Query: 30   SRQLKRWF 7
            SRQLKRWF
Sbjct: 909  SRQLKRWF 916


>ref|XP_010647688.1| PREDICTED: RNA-binding protein 28 isoform X1 [Vitis vinifera]
          Length = 957

 Score =  804 bits (2076), Expect = 0.0
 Identities = 476/944 (50%), Positives = 586/944 (62%), Gaps = 135/944 (14%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            H PS + VSN P SFT+ QL +TFSD GP ++RCFMV +KGS  HRG GFVQF   EDA 
Sbjct: 16   HCPSTVFVSNFPYSFTNSQLEETFSDVGP-IRRCFMVTQKGSTEHRGFGFVQFAVKEDAN 74

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNK-VNADD----------------QG 2125
             A ELKNG+ +GG+KI V+LA  R  L+QRR K N+ V++DD                QG
Sbjct: 75   RAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQAVHSDDIIKTRTEKDSSSEVVKQG 134

Query: 2124 TA-------------KALVPLDIVATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKE 1984
             A             KAL P    A KG  SEKQRVARTVIFGGL NAD+AE V  RA+E
Sbjct: 135  HASDLQEIEKHVELRKALKPCTDQADKGSFSEKQRVARTVIFGGLLNADMAEVVHLRARE 194

Query: 1983 VEKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGAS 1804
            V     V SV YPLPK++LE H L++DGCK+DA+AVLY+SVK A  +V+ LHQ+EIKG  
Sbjct: 195  VG---TVCSVTYPLPKEELEHHGLSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGI 251

Query: 1803 VWARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFA 1624
            VWARQLGGEGSKT+KWKLIVRN+PF+AK  EIK++FSSAGFVW+  IPQ  +TGLS+GFA
Sbjct: 252  VWARQLGGEGSKTQKWKLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFA 311

Query: 1623 FITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNG-LQHREEED 1447
            F+ FT KQDAENAI+K NG+  G RPIAVDWAVPKKIYITGAN V + ++G L  R+ E 
Sbjct: 312  FVKFTSKQDAENAIQKFNGEKIGKRPIAVDWAVPKKIYITGANPVVASEDGQLNGRDGEG 371

Query: 1446 ETSNDNIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMI 1267
            +T +D++ED     D K   PQ   +A ++S+ T         DF +E DIA KV  N+I
Sbjct: 372  DTDSDDLEDDTTDIDNKVPHPQGVGSAPDDSNTTEKEVMPTEFDFNEEADIARKVLKNLI 431

Query: 1266 TSEGKGNLDS-------IGEDSALPPSKELTTTMEKAAVRVKPKWPGMTEHTEHAKMEEQ 1108
            TS  KG L S       +  D  +   K+ +   EKA+   +P+    ++      +E +
Sbjct: 432  TSSAKGTLPSSSGGPTDLNFDETIDVLKKTSNESEKASDVTEPENSSKSKLLNLRPIESE 491

Query: 1107 ---QRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXXXX 937
               QRT+FI NLPFD   E+VKQ+FS+FG+VQSF+PVLH+VT+RP GTGFLKF+T     
Sbjct: 492  DDLQRTIFISNLPFDIDKEEVKQQFSKFGEVQSFVPVLHQVTKRPKGTGFLKFNTVAAAD 551

Query: 936  XXXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGIILE 757
                    T    I LKGRQLT  KA DKKSAHD +L K+K E  D RNLYLAKEG+I+E
Sbjct: 552  AAVSAANPTSSLGIFLKGRQLTALKALDKKSAHDKELKKSKPEERDHRNLYLAKEGLIVE 611

Query: 756  GSPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFVDA 577
            G+PAAEGVS+ DMSKRH+L + K+ KL+SPNFHVSRTRLI+YNLP ++++K++KK+ +DA
Sbjct: 612  GTPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRTRLIIYNLPKSMTEKEVKKLCIDA 671

Query: 576  VLSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALRVLNNNPETF 400
            V SRA+KQ P+I+QIKFL + K  K  TKN+SR VAFI+FTEHQHALVALRVLNNNPETF
Sbjct: 672  VTSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAFIEFTEHQHALVALRVLNNNPETF 731

Query: 399  GPERRPIIEFALDNIQTLKLRQRKLAYWS-------------------TEKPNKKVSSR- 280
            GPE RPI+EFALDNIQTL+ R+ KL  +                       PNKK+ SR 
Sbjct: 732  GPEHRPIVEFALDNIQTLRQRRAKLEAYQQINHGYPEDLQPNDDPNTPEASPNKKMKSRK 791

Query: 279  LNSKSADAPELKSE-----------------DAEMVQKKRKFQ----------------- 202
              S+  D P   SE                 D     KK K                   
Sbjct: 792  RKSRDNDGPLKTSEPNEGDEPEDKVIKGAVIDRHGAAKKHKINPAKEKQKDKRKKLNNSH 851

Query: 201  --GKINLEQPRKGK-----------------FPNKTKKRSKTGGDEG------------- 118
              GK + E+P K +                  P K K +      EG             
Sbjct: 852  GIGKPDDEKPLKAESTISKARNSKSSEESNMLPKKRKLQEHIAVQEGKSPKQKTRTRRSK 911

Query: 117  -------VDKLDVLVEQYRSKFSQHIVYKTAGEKQGSRQLKRWF 7
                   +DKLD+LVEQYR+KFSQ    KT G+KQGSRQLKRWF
Sbjct: 912  DPSGQVILDKLDMLVEQYRAKFSQQTDDKTDGQKQGSRQLKRWF 955


>ref|XP_010647689.1| PREDICTED: RNA-binding protein 28 isoform X2 [Vitis vinifera]
          Length = 953

 Score =  801 bits (2068), Expect = 0.0
 Identities = 475/943 (50%), Positives = 583/943 (61%), Gaps = 134/943 (14%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            H PS + VSN P SFT+ QL +TFSD GP ++RCFMV +KGS  HRG GFVQF   EDA 
Sbjct: 16   HCPSTVFVSNFPYSFTNSQLEETFSDVGP-IRRCFMVTQKGSTEHRGFGFVQFAVKEDAN 74

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNADD----------------QGT 2122
             A ELKNG+ +GG+KI V+LA  R  L+QRR K N+   DD                QG 
Sbjct: 75   RAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQ---DDIIKTRTEKDSSSEVVKQGH 131

Query: 2121 A-------------KALVPLDIVATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKEV 1981
            A             KAL P    A KG  SEKQRVARTVIFGGL NAD+AE V  RA+EV
Sbjct: 132  ASDLQEIEKHVELRKALKPCTDQADKGSFSEKQRVARTVIFGGLLNADMAEVVHLRAREV 191

Query: 1980 EKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGASV 1801
                 V SV YPLPK++LE H L++DGCK+DA+AVLY+SVK A  +V+ LHQ+EIKG  V
Sbjct: 192  G---TVCSVTYPLPKEELEHHGLSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIV 248

Query: 1800 WARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFAF 1621
            WARQLGGEGSKT+KWKLIVRN+PF+AK  EIK++FSSAGFVW+  IPQ  +TGLS+GFAF
Sbjct: 249  WARQLGGEGSKTQKWKLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAF 308

Query: 1620 ITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNG-LQHREEEDE 1444
            + FT KQDAENAI+K NG+  G RPIAVDWAVPKKIYITGAN V + ++G L  R+ E +
Sbjct: 309  VKFTSKQDAENAIQKFNGEKIGKRPIAVDWAVPKKIYITGANPVVASEDGQLNGRDGEGD 368

Query: 1443 TSNDNIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMIT 1264
            T +D++ED     D K   PQ   +A ++S+ T         DF +E DIA KV  N+IT
Sbjct: 369  TDSDDLEDDTTDIDNKVPHPQGVGSAPDDSNTTEKEVMPTEFDFNEEADIARKVLKNLIT 428

Query: 1263 SEGKGNLDS-------IGEDSALPPSKELTTTMEKAAVRVKPKWPGMTEHTEHAKMEEQ- 1108
            S  KG L S       +  D  +   K+ +   EKA+   +P+    ++      +E + 
Sbjct: 429  SSAKGTLPSSSGGPTDLNFDETIDVLKKTSNESEKASDVTEPENSSKSKLLNLRPIESED 488

Query: 1107 --QRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXXXXX 934
              QRT+FI NLPFD   E+VKQ+FS+FG+VQSF+PVLH+VT+RP GTGFLKF+T      
Sbjct: 489  DLQRTIFISNLPFDIDKEEVKQQFSKFGEVQSFVPVLHQVTKRPKGTGFLKFNTVAAADA 548

Query: 933  XXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGIILEG 754
                   T    I LKGRQLT  KA DKKSAHD +L K+K E  D RNLYLAKEG+I+EG
Sbjct: 549  AVSAANPTSSLGIFLKGRQLTALKALDKKSAHDKELKKSKPEERDHRNLYLAKEGLIVEG 608

Query: 753  SPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFVDAV 574
            +PAAEGVS+ DMSKRH+L + K+ KL+SPNFHVSRTRLI+YNLP ++++K++KK+ +DAV
Sbjct: 609  TPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRTRLIIYNLPKSMTEKEVKKLCIDAV 668

Query: 573  LSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALRVLNNNPETFG 397
             SRA+KQ P+I+QIKFL + K  K  TKN+SR VAFI+FTEHQHALVALRVLNNNPETFG
Sbjct: 669  TSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAFIEFTEHQHALVALRVLNNNPETFG 728

Query: 396  PERRPIIEFALDNIQTLKLRQRKLAYWS-------------------TEKPNKKVSSR-L 277
            PE RPI+EFALDNIQTL+ R+ KL  +                       PNKK+ SR  
Sbjct: 729  PEHRPIVEFALDNIQTLRQRRAKLEAYQQINHGYPEDLQPNDDPNTPEASPNKKMKSRKR 788

Query: 276  NSKSADAPELKSE-----------------DAEMVQKKRKFQ------------------ 202
             S+  D P   SE                 D     KK K                    
Sbjct: 789  KSRDNDGPLKTSEPNEGDEPEDKVIKGAVIDRHGAAKKHKINPAKEKQKDKRKKLNNSHG 848

Query: 201  -GKINLEQPRKGK-----------------FPNKTKKRSKTGGDEG-------------- 118
             GK + E+P K +                  P K K +      EG              
Sbjct: 849  IGKPDDEKPLKAESTISKARNSKSSEESNMLPKKRKLQEHIAVQEGKSPKQKTRTRRSKD 908

Query: 117  ------VDKLDVLVEQYRSKFSQHIVYKTAGEKQGSRQLKRWF 7
                  +DKLD+LVEQYR+KFSQ    KT G+KQGSRQLKRWF
Sbjct: 909  PSGQVILDKLDMLVEQYRAKFSQQTDDKTDGQKQGSRQLKRWF 951


>ref|XP_010254678.1| PREDICTED: RNA-binding protein 28 isoform X2 [Nelumbo nucifera]
          Length = 957

 Score =  760 bits (1963), Expect = 0.0
 Identities = 451/940 (47%), Positives = 571/940 (60%), Gaps = 131/940 (13%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HSPS I VSNLP SFT+ QL +TFS+ GP ++RCFMV EKGSN HRG GFVQF   EDA 
Sbjct: 22   HSPSTIFVSNLPYSFTNSQLEETFSEVGP-IRRCFMVTEKGSNAHRGFGFVQFAVMEDAN 80

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNADD------------------- 2131
             A ELKNGA +GG+K+ V+ A  R  L+QR  + N+V+ +D                   
Sbjct: 81   RAIELKNGASIGGRKVVVKHAMHRLPLEQRHSRANQVHMNDVKKKDGDENFSSRMVKKEH 140

Query: 2130 ------QGTAKALVPLDIVATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKEVEKVE 1969
                  +GT + +V L   A K   SEKQRVARTVIFGGL + D+AEEV  R +EV    
Sbjct: 141  ASKLHTKGTTEEMVVLSDHAYKTDGSEKQRVARTVIFGGLLSVDMAEEVHRRTREVG--- 197

Query: 1968 NVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGASVWARQ 1789
             V S+ YPLPK++LE H LA+DGCKM+A++VLY SVK+AR +V+ LHQQEIKG  VWARQ
Sbjct: 198  TVCSISYPLPKEELELHGLAKDGCKMNASSVLYASVKAARASVAMLHQQEIKGGCVWARQ 257

Query: 1788 LGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFAFITFT 1609
            LGGEGSKT KW+LIVRN+PF+AK NEIK+LF+SAGFVW+V +P    TGLSKGFAF++FT
Sbjct: 258  LGGEGSKTRKWRLIVRNLPFKAKVNEIKDLFASAGFVWDVFVPLNSKTGLSKGFAFVSFT 317

Query: 1608 CKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNGLQH-REEEDETSND 1432
            CKQDAENAI+KVNGQ    RPIAVDWAVPKKIY TG N V++  +G ++ R +E + S+ 
Sbjct: 318  CKQDAENAIKKVNGQMISKRPIAVDWAVPKKIYTTGGNLVETQTDGAENDRHDESDNSSI 377

Query: 1431 NIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMITSEGK 1252
            ++E    G D+ SQQ  A +   E SD   N   ++ +DF++E  I  KV  N+ITS   
Sbjct: 378  DMEGDYAGSDKDSQQVDA-EEVQEGSDHIDNEVHSKELDFDEEAGIVKKVLNNLITSSAS 436

Query: 1251 GNLDSIGEDSALPPSKELT-------TTMEKAAVRVKPKWPGMTEHTEHAKMEEQ---QR 1102
              L   G +S LP   E         +  EK+     P      E     +++ +   QR
Sbjct: 437  ATLP-FGGNSRLPQGNETAIDAKNKLSIQEKSLDVALPPKSSKVETVALGRVDSEDDLQR 495

Query: 1101 TVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXXXXXXXXX 922
            T+FI NLPFD   EDVK+RFS FG+V+SF+PVLH+VT+RP GTGFL+F+T          
Sbjct: 496  TIFISNLPFDVDIEDVKKRFSAFGEVKSFVPVLHQVTKRPRGTGFLRFNTTSAAEAAVLA 555

Query: 921  XXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGIILEGSPAA 742
              AT    I+L GRQLTV KA DKKSAH  +L+K K+E  D RNLYLAKEG+ILEG+ AA
Sbjct: 556  ANATSGLGIVLNGRQLTVLKALDKKSAHKKELEKTKNEDHDHRNLYLAKEGLILEGTSAA 615

Query: 741  EGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFVDAVLSRA 562
            EGVS+ DM KR +L K K  KL+SPNFHVSRTRLIVYNLP ++++K+LKK+F+DAVLSRA
Sbjct: 616  EGVSASDMLKRQMLYKKKMSKLESPNFHVSRTRLIVYNLPKSMTEKELKKLFIDAVLSRA 675

Query: 561  SKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALRVLNNNPETFGPERR 385
            SKQ PVI+QIKFL ++K  K  +KNYSR VAF++FTEHQHA+VALRVLNNNPETFGPE R
Sbjct: 676  SKQKPVIRQIKFLEDSKKGKVVSKNYSRGVAFVEFTEHQHAIVALRVLNNNPETFGPEHR 735

Query: 384  PIIEFALDNIQTLKLRQRK--------------------LAYWSTEKPNKKVSSRLNSKS 265
            PI+EFALDNIQTLK R  K                    L    T K   K  +R++   
Sbjct: 736  PIVEFALDNIQTLKKRNAKLQAQQQSAGSHLEDVHPKTALQQKDTRKKLGKSKTRVDDIP 795

Query: 264  ADAPELKSEDAEMVQKKRKFQGK------------------------------------- 196
            ++    K  + + VQK    +G                                      
Sbjct: 796  SEVITSKDHEVDRVQKTGNKEGSAAKKHKGIPESGRKGGLTSEESTRKPSRHQKMTKQKG 855

Query: 195  ----------INLEQPRKGKF---PNKTKKRSKTGGDEGVDKLDVLVEQYRSKFSQ---- 67
                      +  E  +K K    P K K +     +E +D+  +  ++ +SK S+    
Sbjct: 856  GKLFHGGDMVVGTEDEKKAKVEIGPKKRKLQDSVHSEEMMDRKSLKKKKKKSKKSEASDK 915

Query: 66   HIVYK--------------------TAGEKQGSRQLKRWF 7
             +V K                      GEKQGSRQ++RWF
Sbjct: 916  ELVDKLDMLIEQYRSKFSKRSSSDMIGGEKQGSRQIRRWF 955


>ref|XP_010254677.1| PREDICTED: RNA-binding protein 28 isoform X1 [Nelumbo nucifera]
          Length = 961

 Score =  759 bits (1960), Expect = 0.0
 Identities = 451/944 (47%), Positives = 571/944 (60%), Gaps = 135/944 (14%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HSPS I VSNLP SFT+ QL +TFS+ GP ++RCFMV EKGSN HRG GFVQF   EDA 
Sbjct: 22   HSPSTIFVSNLPYSFTNSQLEETFSEVGP-IRRCFMVTEKGSNAHRGFGFVQFAVMEDAN 80

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNADD------------------- 2131
             A ELKNGA +GG+K+ V+ A  R  L+QR  + N+V+ +D                   
Sbjct: 81   RAIELKNGASIGGRKVVVKHAMHRLPLEQRHSRANQVHMNDVKKKDGDENFSSRMVKKEH 140

Query: 2130 ----------QGTAKALVPLDIVATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKEV 1981
                      +GT + +V L   A K   SEKQRVARTVIFGGL + D+AEEV  R +EV
Sbjct: 141  ASKLHTKGDSEGTTEEMVVLSDHAYKTDGSEKQRVARTVIFGGLLSVDMAEEVHRRTREV 200

Query: 1980 EKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGASV 1801
                 V S+ YPLPK++LE H LA+DGCKM+A++VLY SVK+AR +V+ LHQQEIKG  V
Sbjct: 201  G---TVCSISYPLPKEELELHGLAKDGCKMNASSVLYASVKAARASVAMLHQQEIKGGCV 257

Query: 1800 WARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFAF 1621
            WARQLGGEGSKT KW+LIVRN+PF+AK NEIK+LF+SAGFVW+V +P    TGLSKGFAF
Sbjct: 258  WARQLGGEGSKTRKWRLIVRNLPFKAKVNEIKDLFASAGFVWDVFVPLNSKTGLSKGFAF 317

Query: 1620 ITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNGLQH-REEEDE 1444
            ++FTCKQDAENAI+KVNGQ    RPIAVDWAVPKKIY TG N V++  +G ++ R +E +
Sbjct: 318  VSFTCKQDAENAIKKVNGQMISKRPIAVDWAVPKKIYTTGGNLVETQTDGAENDRHDESD 377

Query: 1443 TSNDNIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMIT 1264
             S+ ++E    G D+ SQQ  A +   E SD   N   ++ +DF++E  I  KV  N+IT
Sbjct: 378  NSSIDMEGDYAGSDKDSQQVDA-EEVQEGSDHIDNEVHSKELDFDEEAGIVKKVLNNLIT 436

Query: 1263 SEGKGNLDSIGEDSALPPSKELT-------TTMEKAAVRVKPKWPGMTEHTEHAKMEEQ- 1108
            S     L   G +S LP   E         +  EK+     P      E     +++ + 
Sbjct: 437  SSASATLP-FGGNSRLPQGNETAIDAKNKLSIQEKSLDVALPPKSSKVETVALGRVDSED 495

Query: 1107 --QRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXXXXX 934
              QRT+FI NLPFD   EDVK+RFS FG+V+SF+PVLH+VT+RP GTGFL+F+T      
Sbjct: 496  DLQRTIFISNLPFDVDIEDVKKRFSAFGEVKSFVPVLHQVTKRPRGTGFLRFNTTSAAEA 555

Query: 933  XXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGIILEG 754
                  AT    I+L GRQLTV KA DKKSAH  +L+K K+E  D RNLYLAKEG+ILEG
Sbjct: 556  AVLAANATSGLGIVLNGRQLTVLKALDKKSAHKKELEKTKNEDHDHRNLYLAKEGLILEG 615

Query: 753  SPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFVDAV 574
            + AAEGVS+ DM KR +L K K  KL+SPNFHVSRTRLIVYNLP ++++K+LKK+F+DAV
Sbjct: 616  TSAAEGVSASDMLKRQMLYKKKMSKLESPNFHVSRTRLIVYNLPKSMTEKELKKLFIDAV 675

Query: 573  LSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALRVLNNNPETFG 397
            LSRASKQ PVI+QIKFL ++K  K  +KNYSR VAF++FTEHQHA+VALRVLNNNPETFG
Sbjct: 676  LSRASKQKPVIRQIKFLEDSKKGKVVSKNYSRGVAFVEFTEHQHAIVALRVLNNNPETFG 735

Query: 396  PERRPIIEFALDNIQTLKLRQRK--------------------LAYWSTEKPNKKVSSRL 277
            PE RPI+EFALDNIQTLK R  K                    L    T K   K  +R+
Sbjct: 736  PEHRPIVEFALDNIQTLKKRNAKLQAQQQSAGSHLEDVHPKTALQQKDTRKKLGKSKTRV 795

Query: 276  NSKSADAPELKSEDAEMVQKKRKFQGK--------------------------------- 196
            +   ++    K  + + VQK    +G                                  
Sbjct: 796  DDIPSEVITSKDHEVDRVQKTGNKEGSAAKKHKGIPESGRKGGLTSEESTRKPSRHQKMT 855

Query: 195  --------------INLEQPRKGKF---PNKTKKRSKTGGDEGVDKLDVLVEQYRSKFSQ 67
                          +  E  +K K    P K K +     +E +D+  +  ++ +SK S+
Sbjct: 856  KQKGGKLFHGGDMVVGTEDEKKAKVEIGPKKRKLQDSVHSEEMMDRKSLKKKKKKSKKSE 915

Query: 66   ----HIVYK--------------------TAGEKQGSRQLKRWF 7
                 +V K                      GEKQGSRQ++RWF
Sbjct: 916  ASDKELVDKLDMLIEQYRSKFSKRSSSDMIGGEKQGSRQIRRWF 959


>ref|XP_011047777.1| PREDICTED: RNA-binding protein 28 isoform X3 [Populus euphratica]
          Length = 837

 Score =  735 bits (1897), Expect = 0.0
 Identities = 427/822 (51%), Positives = 530/822 (64%), Gaps = 54/822 (6%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HS S + VS LP SFT+ QL +TFSD GP ++RCFMV +KGS  HRG GFVQF   +DA 
Sbjct: 16   HSSSTLFVSGLPYSFTNSQLEETFSDVGP-IRRCFMVTQKGSTEHRGFGFVQFALKDDAN 74

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNADDQGTAKALVPLD---IVATK 2083
             A E+KNG+ VGG+KIAV+ A  RA+L+QRR K  +     QG   A   +D    VA+K
Sbjct: 75   RAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQGQGQVQGQDDATKTMDDKGSVASK 134

Query: 2082 -----------GKP-------------------SEKQRVARTVIFGGLTNADVAEEVICR 1993
                       GKP                   SEKQRVARTVIFGGL N  +AE+V  R
Sbjct: 135  PEKHVLNVLESGKPREPRKPAKLVTDLTDKENCSEKQRVARTVIFGGLLNDAMAEDVHQR 194

Query: 1992 AKEVEKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIK 1813
            AKE      V SV YPLPK++L++H L +DGC+  A+AVL+TSVK AR  V+ LHQ+EIK
Sbjct: 195  AKETG---TVCSVTYPLPKEELKKHGLEQDGCRSGASAVLFTSVKEARSCVAMLHQKEIK 251

Query: 1812 GASVWARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSK 1633
            G  VWARQLGGEG KT+KWKLI+RN+PF+AK NEIK++F SAGFVW+V +P   +TGLS+
Sbjct: 252  GGIVWARQLGGEGCKTQKWKLIIRNLPFKAKPNEIKDVFESAGFVWDVFVPHNSETGLSR 311

Query: 1632 GFAFITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNGLQHREE 1453
            GFAF+ FTCKQDAENAI+K NGQ FG RPIAVDWAVPKKIY +GAN   + ++G  H+ E
Sbjct: 312  GFAFVKFTCKQDAENAIQKFNGQKFGKRPIAVDWAVPKKIYSSGANVPAASEDG--HQNE 369

Query: 1452 EDETSNDNIEDVIGGRD----RKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASK 1285
            +D +  D+  D     D     K Q+      A+ +SD++        VDFE+E DIA K
Sbjct: 370  KDSSCEDSDYDDDDNNDTDVIEKKQRHDGVVIASPDSDLSEKEDTPTEVDFEQEADIARK 429

Query: 1284 VCTNMITSEGKGNLDSIGEDSALPPSKELTTTMEKAAVRVKPKWPGMTEH---------- 1135
            V  N+ITS  K +  +  +D  LP   E     E   V V  K PG +E+          
Sbjct: 430  VLRNLITSSSKDSASTNMDDDVLPKGIE-----ELDTVVVPSKLPGESENLSGSPLSSGK 484

Query: 1134 ----TEHAKMEEQ-QRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTG 970
                T+H   E+  QRTVFI NLPFD  S +VKQRFS FG+V SF+PVLH+VT+RP GTG
Sbjct: 485  SKPSTKHIDGEDDLQRTVFISNLPFDVESGEVKQRFSAFGEVLSFVPVLHQVTKRPRGTG 544

Query: 969  FLKFSTXXXXXXXXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRN 790
            FLKF T                  I LKGRQL V KA DKKSAHD + +K K E  D RN
Sbjct: 545  FLKFKTADGATAAVSAANVASGLGIFLKGRQLAVLKALDKKSAHDKEKEKTKIEDRDHRN 604

Query: 789  LYLAKEGIILEGSPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAIS 610
            LYLAKEG+ILEG+PAAEGVS  DM+KR+ L++ K  KL+SPNFHVSRTRL+VYNLP +++
Sbjct: 605  LYLAKEGLILEGTPAAEGVSISDMAKRNRLQEEKMTKLKSPNFHVSRTRLVVYNLPKSMT 664

Query: 609  QKQLKKIFVDAVLSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVA 433
            +KQLKK+F+DAV SRA+KQ PVI+Q+KFL   K  K  TK++SR VAF++FTE+QHALVA
Sbjct: 665  EKQLKKLFIDAVTSRATKQNPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEFTEYQHALVA 724

Query: 432  LRVLNNNPETFGPERRPIIEFALDNIQTLKLRQRKLAYWSTEKPNKKVSSRLNSKSADAP 253
            LRVLNNNPETFGPE RPI+ FALDN+QTLKLR+ KL     E       ++ N KS  AP
Sbjct: 725  LRVLNNNPETFGPEHRPIVSFALDNVQTLKLRKAKLQVQQQETHKDFQDTQENDKSR-AP 783

Query: 252  ELKSEDAEMVQKKRKFQGKINLEQPRKGKFPN-KTKKRSKTG 130
                   EM +K++       ++ P   +    K K   +TG
Sbjct: 784  NAIPSQKEMSRKRKSRVENRAVKDPESNRMDEVKNKDSYRTG 825


>ref|XP_006487344.1| PREDICTED: RNA-binding protein 28-like isoform X1 [Citrus sinensis]
            gi|568868077|ref|XP_006487345.1| PREDICTED: RNA-binding
            protein 28-like isoform X2 [Citrus sinensis]
          Length = 938

 Score =  733 bits (1893), Expect = 0.0
 Identities = 432/832 (51%), Positives = 537/832 (64%), Gaps = 55/832 (6%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HSPS + V+NLP SFT+ QL + FSD GP ++RCFMV +KGSN HRG G+VQF   EDA 
Sbjct: 15   HSPSTVFVNNLPYSFTNSQLEEAFSDVGP-IRRCFMVTKKGSNEHRGFGYVQFAVMEDAN 73

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLK-TNKVNADD------------QGTAK- 2116
             A E+KNG  VGG+KI V+ A  RA+L+QRR K T +V A+D             G  K 
Sbjct: 74   RAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQAEDIEKTMDNKDGVISGAEKH 133

Query: 2115 ----------------ALVPLDIVATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKE 1984
                            A + +D+ A K   S+KQRVARTVI GGL NAD+AEEV    + 
Sbjct: 134  SSKLLESGKTVKPRKAATLGIDL-ADKENCSQKQRVARTVIIGGLLNADMAEEV---HRL 189

Query: 1983 VEKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGAS 1804
               +  V SV YPLPK++LEQH LA++GCKMDA+AVLYT+VKSA  +V+ LHQ+EIKG +
Sbjct: 190  AGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEIKGGT 249

Query: 1803 VWARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFA 1624
            VWARQLGGEGSKT+KWKLIVRNIPF+AK NEIK++FS  G VWNV IP   DTGLSKGFA
Sbjct: 250  VWARQLGGEGSKTQKWKLIVRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFA 309

Query: 1623 FITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNGLQHREEEDE 1444
            F+ FTCK+DAE+AI+K NGQ FG RPIAVDWAVPK IY +G  A  +Y++G+Q++   D 
Sbjct: 310  FVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGAYEDGVQNKG--DG 367

Query: 1443 TSNDNIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMIT 1264
             S+   +D +G  D ++    +   ++E  D+  N       DF++E DIA KV  N +T
Sbjct: 368  NSDSGSDDDLGDDDAETASDDSN--SSEKEDLPSN------ADFDEEVDIARKVL-NKLT 418

Query: 1263 SEGKGNLDSIGEDSALPPSKELT----TTMEKAAV---------RVKPKWPGMTEHTEHA 1123
            S   G+L S+ +DSAL    +      T  E A V         + KPK    TE  +  
Sbjct: 419  ST-TGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGED-- 475

Query: 1122 KMEEQQRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXX 943
               E Q T+FI NLPFD  +E+VKQRFS FG+V SF+PVLH+VT+RP GTGFLKF T   
Sbjct: 476  ---ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 532

Query: 942  XXXXXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGII 763
                      T    I LKGRQLTV KA DKK AHD ++DK+K+E  D RNLYLAKEG+I
Sbjct: 533  ATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLI 592

Query: 762  LEGSPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFV 583
            LEG+PAAEGVS  DMSKR +L + K  KLQSPNFHVSRTRL++YNLP ++++K LKK+ +
Sbjct: 593  LEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI 652

Query: 582  DAVLSRASKQTPVIQQIKFLNETKAAKA-TKNYSRRVAFIQFTEHQHALVALRVLNNNPE 406
            DAV+SRASKQ PVI+QIKFL   K  K  TK+YSR VAF++FTEHQHALVALRVLNNNP+
Sbjct: 653  DAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPK 712

Query: 405  TFGPERRPIIEFALDNIQTLKLRQRKLAYWSTEK---------PNKKVSSRLNSKSADAP 253
            TFGPE RPI+EFA+DN+QTLK R  K+     +          PNK   SR      D+ 
Sbjct: 713  TFGPEHRPIVEFAVDNVQTLKQRNAKIQAQQQQNDESNTMDTYPNKLEKSRKRKPIGDSR 772

Query: 252  ELK--SEDAEMVQKKRKFQGKINLEQPRKGKFPNKTKKRSKTGGDEGVDKLD 103
              K      + V      +GKIN     K    NK +K +    +  V   D
Sbjct: 773  SEKDSGHGEDSVVNDGVQEGKIN-----KKHKANKKQKHNPASDEAEVSLRD 819



 Score = 68.9 bits (167), Expect = 3e-08
 Identities = 41/101 (40%), Positives = 55/101 (54%)
 Frame = -3

Query: 309  EKPNKKVSSRLNSKSADAPELKSEDAEMVQKKRKFQGKINLEQPRKGKFPNKTKKRSKTG 130
            +KP+ + S++ N          SE A    +KRK   +       K     + KK   T 
Sbjct: 839  QKPDVETSTKGNDARKSN---SSEQAHFRSQKRKLGYQTEGLVGDKSMKRKRPKKNKDTA 895

Query: 129  GDEGVDKLDVLVEQYRSKFSQHIVYKTAGEKQGSRQLKRWF 7
            G E VDKLDVL+E+YR+KFSQ    K  G+KQGS+QL+RWF
Sbjct: 896  GREAVDKLDVLIEKYRAKFSQQGSNKPDGDKQGSKQLRRWF 936


>ref|XP_011047784.1| PREDICTED: RNA-binding protein 28 isoform X4 [Populus euphratica]
          Length = 835

 Score =  733 bits (1892), Expect = 0.0
 Identities = 424/820 (51%), Positives = 529/820 (64%), Gaps = 52/820 (6%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HS S + VS LP SFT+ QL +TFSD GP ++RCFMV +KGS  HRG GFVQF   +DA 
Sbjct: 16   HSSSTLFVSGLPYSFTNSQLEETFSDVGP-IRRCFMVTQKGSTEHRGFGFVQFALKDDAN 74

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNA----------DDQGTAKALVP 2104
             A E+KNG+ VGG+KIAV+ A  RA+L+QRR K  +             DD+G+  +   
Sbjct: 75   RAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQGQGQVQDDATKTMDDKGSVASKPE 134

Query: 2103 LDI--VATKGKP-------------------SEKQRVARTVIFGGLTNADVAEEVICRAK 1987
              +  V   GKP                   SEKQRVARTVIFGGL N  +AE+V  RAK
Sbjct: 135  KHVLNVLESGKPREPRKPAKLVTDLTDKENCSEKQRVARTVIFGGLLNDAMAEDVHQRAK 194

Query: 1986 EVEKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGA 1807
            E      V SV YPLPK++L++H L +DGC+  A+AVL+TSVK AR  V+ LHQ+EIKG 
Sbjct: 195  ETG---TVCSVTYPLPKEELKKHGLEQDGCRSGASAVLFTSVKEARSCVAMLHQKEIKGG 251

Query: 1806 SVWARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGF 1627
             VWARQLGGEG KT+KWKLI+RN+PF+AK NEIK++F SAGFVW+V +P   +TGLS+GF
Sbjct: 252  IVWARQLGGEGCKTQKWKLIIRNLPFKAKPNEIKDVFESAGFVWDVFVPHNSETGLSRGF 311

Query: 1626 AFITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNGLQHREEED 1447
            AF+ FTCKQDAENAI+K NGQ FG RPIAVDWAVPKKIY +GAN   + ++G  H+ E+D
Sbjct: 312  AFVKFTCKQDAENAIQKFNGQKFGKRPIAVDWAVPKKIYSSGANVPAASEDG--HQNEKD 369

Query: 1446 ETSNDNIEDVIGGRD----RKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVC 1279
             +  D+  D     D     K Q+      A+ +SD++        VDFE+E DIA KV 
Sbjct: 370  SSCEDSDYDDDDNNDTDVIEKKQRHDGVVIASPDSDLSEKEDTPTEVDFEQEADIARKVL 429

Query: 1278 TNMITSEGKGNLDSIGEDSALPPSKELTTTMEKAAVRVKPKWPGMTEH------------ 1135
             N+ITS  K +  +  +D  LP   E     E   V V  K PG +E+            
Sbjct: 430  RNLITSSSKDSASTNMDDDVLPKGIE-----ELDTVVVPSKLPGESENLSGSPLSSGKSK 484

Query: 1134 --TEHAKMEEQ-QRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFL 964
              T+H   E+  QRTVFI NLPFD  S +VKQRFS FG+V SF+PVLH+VT+RP GTGFL
Sbjct: 485  PSTKHIDGEDDLQRTVFISNLPFDVESGEVKQRFSAFGEVLSFVPVLHQVTKRPRGTGFL 544

Query: 963  KFSTXXXXXXXXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLY 784
            KF T                  I LKGRQL V KA DKKSAHD + +K K E  D RNLY
Sbjct: 545  KFKTADGATAAVSAANVASGLGIFLKGRQLAVLKALDKKSAHDKEKEKTKIEDRDHRNLY 604

Query: 783  LAKEGIILEGSPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQK 604
            LAKEG+ILEG+PAAEGVS  DM+KR+ L++ K  KL+SPNFHVSRTRL+VYNLP ++++K
Sbjct: 605  LAKEGLILEGTPAAEGVSISDMAKRNRLQEEKMTKLKSPNFHVSRTRLVVYNLPKSMTEK 664

Query: 603  QLKKIFVDAVLSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALR 427
            QLKK+F+DAV SRA+KQ PVI+Q+KFL   K  K  TK++SR VAF++FTE+QHALVALR
Sbjct: 665  QLKKLFIDAVTSRATKQNPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEFTEYQHALVALR 724

Query: 426  VLNNNPETFGPERRPIIEFALDNIQTLKLRQRKLAYWSTEKPNKKVSSRLNSKSADAPEL 247
            VLNNNPETFGPE RPI+ FALDN+QTLKLR+ KL     E       ++ N KS  AP  
Sbjct: 725  VLNNNPETFGPEHRPIVSFALDNVQTLKLRKAKLQVQQQETHKDFQDTQENDKSR-APNA 783

Query: 246  KSEDAEMVQKKRKFQGKINLEQPRKGKFPN-KTKKRSKTG 130
                 EM +K++       ++ P   +    K K   +TG
Sbjct: 784  IPSQKEMSRKRKSRVENRAVKDPESNRMDEVKNKDSYRTG 823


>ref|XP_011047769.1| PREDICTED: RNA-binding protein 28 isoform X2 [Populus euphratica]
          Length = 842

 Score =  731 bits (1888), Expect = 0.0
 Identities = 426/827 (51%), Positives = 529/827 (63%), Gaps = 59/827 (7%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HS S + VS LP SFT+ QL +TFSD GP ++RCFMV +KGS  HRG GFVQF   +DA 
Sbjct: 16   HSSSTLFVSGLPYSFTNSQLEETFSDVGP-IRRCFMVTQKGSTEHRGFGFVQFALKDDAN 74

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNADDQG--------TAKALVPLD 2098
             A E+KNG+ VGG+KIAV+ A  RA+L+QRR K  +     QG          K +    
Sbjct: 75   RAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQGQGQVQGQFVVYSDDATKTMDDKG 134

Query: 2097 IVATK-----------GKP-------------------SEKQRVARTVIFGGLTNADVAE 2008
             VA+K           GKP                   SEKQRVARTVIFGGL N  +AE
Sbjct: 135  SVASKPEKHVLNVLESGKPREPRKPAKLVTDLTDKENCSEKQRVARTVIFGGLLNDAMAE 194

Query: 2007 EVICRAKEVEKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLH 1828
            +V  RAKE      V SV YPLPK++L++H L +DGC+  A+AVL+TSVK AR  V+ LH
Sbjct: 195  DVHQRAKETG---TVCSVTYPLPKEELKKHGLEQDGCRSGASAVLFTSVKEARSCVAMLH 251

Query: 1827 QQEIKGASVWARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPD 1648
            Q+EIKG  VWARQLGGEG KT+KWKLI+RN+PF+AK NEIK++F SAGFVW+V +P   +
Sbjct: 252  QKEIKGGIVWARQLGGEGCKTQKWKLIIRNLPFKAKPNEIKDVFESAGFVWDVFVPHNSE 311

Query: 1647 TGLSKGFAFITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNGL 1468
            TGLS+GFAF+ FTCKQDAENAI+K NGQ FG RPIAVDWAVPKKIY +GAN   + ++G 
Sbjct: 312  TGLSRGFAFVKFTCKQDAENAIQKFNGQKFGKRPIAVDWAVPKKIYSSGANVPAASEDG- 370

Query: 1467 QHREEEDETSNDNIEDVIGGRD----RKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEY 1300
             H+ E+D +  D+  D     D     K Q+      A+ +SD++        VDFE+E 
Sbjct: 371  -HQNEKDSSCEDSDYDDDDNNDTDVIEKKQRHDGVVIASPDSDLSEKEDTPTEVDFEQEA 429

Query: 1299 DIASKVCTNMITSEGKGNLDSIGEDSALPPSKELTTTMEKAAVRVKPKWPGMTEH----- 1135
            DIA KV  N+ITS  K +  +  +D  LP   E     E   V V  K PG +E+     
Sbjct: 430  DIARKVLRNLITSSSKDSASTNMDDDVLPKGIE-----ELDTVVVPSKLPGESENLSGSP 484

Query: 1134 ---------TEHAKMEEQ-QRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRR 985
                     T+H   E+  QRTVFI NLPFD  S +VKQRFS FG+V SF+PVLH+VT+R
Sbjct: 485  LSSGKSKPSTKHIDGEDDLQRTVFISNLPFDVESGEVKQRFSAFGEVLSFVPVLHQVTKR 544

Query: 984  PTGTGFLKFSTXXXXXXXXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEH 805
            P GTGFLKF T                  I LKGRQL V KA DKKSAHD + +K K E 
Sbjct: 545  PRGTGFLKFKTADGATAAVSAANVASGLGIFLKGRQLAVLKALDKKSAHDKEKEKTKIED 604

Query: 804  VDQRNLYLAKEGIILEGSPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNL 625
             D RNLYLAKEG+ILEG+PAAEGVS  DM+KR+ L++ K  KL+SPNFHVSRTRL+VYNL
Sbjct: 605  RDHRNLYLAKEGLILEGTPAAEGVSISDMAKRNRLQEEKMTKLKSPNFHVSRTRLVVYNL 664

Query: 624  PNAISQKQLKKIFVDAVLSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQ 448
            P ++++KQLKK+F+DAV SRA+KQ PVI+Q+KFL   K  K  TK++SR VAF++FTE+Q
Sbjct: 665  PKSMTEKQLKKLFIDAVTSRATKQNPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEFTEYQ 724

Query: 447  HALVALRVLNNNPETFGPERRPIIEFALDNIQTLKLRQRKLAYWSTEKPNKKVSSRLNSK 268
            HALVALRVLNNNPETFGPE RPI+ FALDN+QTLKLR+ KL     E       ++ N K
Sbjct: 725  HALVALRVLNNNPETFGPEHRPIVSFALDNVQTLKLRKAKLQVQQQETHKDFQDTQENDK 784

Query: 267  SADAPELKSEDAEMVQKKRKFQGKINLEQPRKGKFPN-KTKKRSKTG 130
            S  AP       EM +K++       ++ P   +    K K   +TG
Sbjct: 785  SR-APNAIPSQKEMSRKRKSRVENRAVKDPESNRMDEVKNKDSYRTG 830


>ref|XP_011047760.1| PREDICTED: RNA-binding protein 28 isoform X1 [Populus euphratica]
          Length = 843

 Score =  731 bits (1887), Expect = 0.0
 Identities = 426/828 (51%), Positives = 529/828 (63%), Gaps = 60/828 (7%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HS S + VS LP SFT+ QL +TFSD GP ++RCFMV +KGS  HRG GFVQF   +DA 
Sbjct: 16   HSSSTLFVSGLPYSFTNSQLEETFSDVGP-IRRCFMVTQKGSTEHRGFGFVQFALKDDAN 74

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNADDQG---------TAKALVPL 2101
             A E+KNG+ VGG+KIAV+ A  RA+L+QRR K  +     QG           K +   
Sbjct: 75   RAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQGQGQVQGQYHVVYSDDATKTMDDK 134

Query: 2100 DIVATK-----------GKP-------------------SEKQRVARTVIFGGLTNADVA 2011
              VA+K           GKP                   SEKQRVARTVIFGGL N  +A
Sbjct: 135  GSVASKPEKHVLNVLESGKPREPRKPAKLVTDLTDKENCSEKQRVARTVIFGGLLNDAMA 194

Query: 2010 EEVICRAKEVEKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKL 1831
            E+V  RAKE      V SV YPLPK++L++H L +DGC+  A+AVL+TSVK AR  V+ L
Sbjct: 195  EDVHQRAKE---TGTVCSVTYPLPKEELKKHGLEQDGCRSGASAVLFTSVKEARSCVAML 251

Query: 1830 HQQEIKGASVWARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAP 1651
            HQ+EIKG  VWARQLGGEG KT+KWKLI+RN+PF+AK NEIK++F SAGFVW+V +P   
Sbjct: 252  HQKEIKGGIVWARQLGGEGCKTQKWKLIIRNLPFKAKPNEIKDVFESAGFVWDVFVPHNS 311

Query: 1650 DTGLSKGFAFITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNG 1471
            +TGLS+GFAF+ FTCKQDAENAI+K NGQ FG RPIAVDWAVPKKIY +GAN   + ++G
Sbjct: 312  ETGLSRGFAFVKFTCKQDAENAIQKFNGQKFGKRPIAVDWAVPKKIYSSGANVPAASEDG 371

Query: 1470 LQHREEEDETSNDNIEDVIGGRD----RKSQQPQAGDTATENSDVTLNYGPAEVVDFEKE 1303
              H+ E+D +  D+  D     D     K Q+      A+ +SD++        VDFE+E
Sbjct: 372  --HQNEKDSSCEDSDYDDDDNNDTDVIEKKQRHDGVVIASPDSDLSEKEDTPTEVDFEQE 429

Query: 1302 YDIASKVCTNMITSEGKGNLDSIGEDSALPPSKELTTTMEKAAVRVKPKWPGMTEH---- 1135
             DIA KV  N+ITS  K +  +  +D  LP   E     E   V V  K PG +E+    
Sbjct: 430  ADIARKVLRNLITSSSKDSASTNMDDDVLPKGIE-----ELDTVVVPSKLPGESENLSGS 484

Query: 1134 ----------TEHAKMEEQ-QRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTR 988
                      T+H   E+  QRTVFI NLPFD  S +VKQRFS FG+V SF+PVLH+VT+
Sbjct: 485  PLSSGKSKPSTKHIDGEDDLQRTVFISNLPFDVESGEVKQRFSAFGEVLSFVPVLHQVTK 544

Query: 987  RPTGTGFLKFSTXXXXXXXXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSE 808
            RP GTGFLKF T                  I LKGRQL V KA DKKSAHD + +K K E
Sbjct: 545  RPRGTGFLKFKTADGATAAVSAANVASGLGIFLKGRQLAVLKALDKKSAHDKEKEKTKIE 604

Query: 807  HVDQRNLYLAKEGIILEGSPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYN 628
              D RNLYLAKEG+ILEG+PAAEGVS  DM+KR+ L++ K  KL+SPNFHVSRTRL+VYN
Sbjct: 605  DRDHRNLYLAKEGLILEGTPAAEGVSISDMAKRNRLQEEKMTKLKSPNFHVSRTRLVVYN 664

Query: 627  LPNAISQKQLKKIFVDAVLSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEH 451
            LP ++++KQLKK+F+DAV SRA+KQ PVI+Q+KFL   K  K  TK++SR VAF++FTE+
Sbjct: 665  LPKSMTEKQLKKLFIDAVTSRATKQNPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEFTEY 724

Query: 450  QHALVALRVLNNNPETFGPERRPIIEFALDNIQTLKLRQRKLAYWSTEKPNKKVSSRLNS 271
            QHALVALRVLNNNPETFGPE RPI+ FALDN+QTLKLR+ KL     E       ++ N 
Sbjct: 725  QHALVALRVLNNNPETFGPEHRPIVSFALDNVQTLKLRKAKLQVQQQETHKDFQDTQEND 784

Query: 270  KSADAPELKSEDAEMVQKKRKFQGKINLEQPRKGKFPN-KTKKRSKTG 130
            KS  AP       EM +K++       ++ P   +    K K   +TG
Sbjct: 785  KSR-APNAIPSQKEMSRKRKSRVENRAVKDPESNRMDEVKNKDSYRTG 831


>ref|XP_012463899.1| PREDICTED: RNA-binding protein 28 [Gossypium raimondii]
            gi|763812268|gb|KJB79120.1| hypothetical protein
            B456_013G034200 [Gossypium raimondii]
          Length = 956

 Score =  724 bits (1868), Expect = 0.0
 Identities = 420/841 (49%), Positives = 543/841 (64%), Gaps = 41/841 (4%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HSP+ + V+NL  SFT+ QL +TFSD GP ++RCFMV +KGS  HRG+ FVQF   EDA 
Sbjct: 15   HSPATVFVTNLAYSFTNSQLEETFSDVGP-IRRCFMVTKKGSTEHRGIAFVQFAVAEDAN 73

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNA-----DDQGTA---------- 2119
             A ELKNG+ VGG+KI V+ A  RA+L+QRR K  + +A     D  G            
Sbjct: 74   RAIELKNGSSVGGRKIGVKHAMHRASLEQRRSKATQDDATKTKNDKDGLLTSAVEAHGSD 133

Query: 2118 -----------KALVPLDIVATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKEVEKV 1972
                       KA      +A K   SEKQRVARTV+FGGL NA++AE+V   AKE+   
Sbjct: 134  LPKLEKPVQPKKAATLCSDLADKENCSEKQRVARTVVFGGLRNAEMAEDVHRLAKEIG-- 191

Query: 1971 ENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGASVWAR 1792
              V +V YPLPK++LE+H LA+DGCKMDA+AVL+TSVKSA  AV+ LHQ+EI G+ VWAR
Sbjct: 192  -TVCAVTYPLPKEELEEHGLAQDGCKMDASAVLFTSVKSAHTAVAMLHQKEIHGSIVWAR 250

Query: 1791 QLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFAFITF 1612
            QLGGEGSKT+KWKLI+RN+ F+AK +EIK++FS+AGFVW+V IP   +TGLSKGFAF+ F
Sbjct: 251  QLGGEGSKTQKWKLIIRNLSFKAKLSEIKDMFSAAGFVWDVFIPHNSETGLSKGFAFVKF 310

Query: 1611 TCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGAN-AVDSYKNGLQHREEEDETSN 1435
            T KQDAENAI+K NG+    RPIAVDWAVPKK+Y  G N AV S    L ++EEE + S+
Sbjct: 311  TSKQDAENAIQKFNGKTLCKRPIAVDWAVPKKLYSAGGNTAVTSDDGQLNNKEEESDGSS 370

Query: 1434 DNIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMITSEG 1255
             ++ED  G  D  S        A+ +S+++     +  VDF+KE DIA KV  N++TS  
Sbjct: 371  IDMEDEGGDSDNDSDD----GIASNDSNMSEMERTSTAVDFDKEVDIARKVLNNLVTSSS 426

Query: 1254 KGNLDSIGEDSALPPSKELTTTMEKAAVR-------------VKPKWPGMTEHTEHAKME 1114
            K +L S+ +   LP S++ T   E   V+              KP+  G  +  +    E
Sbjct: 427  KDSL-SLQDHGVLPKSEDNTNVDETINVQNKLPIESAIGSDVSKPEKSGTNKQID--SEE 483

Query: 1113 EQQRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXXXXX 934
            E QRTVFI NLPFD  +++VK+RFS FG+VQSF+PVLH VT+RP GTGFLKF T      
Sbjct: 484  ELQRTVFISNLPFDIDNKEVKERFSGFGEVQSFIPVLHPVTKRPRGTGFLKFKTIDAATA 543

Query: 933  XXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGIILEG 754
                  A+    I LKGRQ+ V KA D+KSAHD +L+KAK+E  D RNLYLAKEG+I+EG
Sbjct: 544  AVSAANASSGLGIFLKGRQIKVLKALDRKSAHDKELEKAKAEEHDLRNLYLAKEGLIVEG 603

Query: 753  SPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFVDAV 574
            +PAA+ VS+ DM KR +L + K  KLQSPNFHVS+TRL++YNLP ++++ +LK++ +DAV
Sbjct: 604  TPAAKDVSASDMEKRQMLHEKKMTKLQSPNFHVSKTRLVIYNLPKSMTENELKQLCIDAV 663

Query: 573  LSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALRVLNNNPETFG 397
             SRA+KQ PVI+QIKFL   K  K   KN SR VAF++FTEHQHALVALRVLNNNPETFG
Sbjct: 664  TSRATKQKPVIRQIKFLKTVKKGKIVVKNQSRGVAFVEFTEHQHALVALRVLNNNPETFG 723

Query: 396  PERRPIIEFALDNIQTLKLRQRKLAYWSTEKPNKKVSSRLNSKSADAPELKSEDAEMVQK 217
             E RPI+EFA+DN+QTLKLR+ KL     +   +  S  LN            DA+   K
Sbjct: 724  SEHRPIVEFAVDNVQTLKLRKAKL-----QAQQQDASDDLN------------DAQQNAK 766

Query: 216  KRKFQGKINLEQPRKGKFPNKTKKRSKTGGDEGVDKLDVLVEQYRSKFSQHIVYKTAGEK 37
               F    N  + RK +   +  K S+    E    ++ +V     + S+   +K  GEK
Sbjct: 767  AYPFDDHTNKSRKRKSRDDQRATKHSELKKAE----MENVVATEEGQASKKPKHKPTGEK 822

Query: 36   Q 34
            +
Sbjct: 823  R 823



 Score = 61.6 bits (148), Expect = 5e-06
 Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
 Frame = -3

Query: 306  KPNKKVSSRLNSKSADAPELKSEDAEMVQ--KKRKFQGKINLEQPRKGKFPNKTKKRSKT 133
            KP    S ++ +   +  +LK ++ + +   K+R  Q K   E+        + K+    
Sbjct: 853  KPAVGSSDKVETNVNETSKLKLKEVKAISHPKERTRQEKAKPEEGETNLKRKRPKRNKDP 912

Query: 132  GGDEGVDKLDVLVEQYRSKFSQHIVYKTAGEKQGSRQLKRWF 7
             G + VDKLD+L+EQYRSKFSQ        EKQGS++L+RWF
Sbjct: 913  SGRDVVDKLDMLIEQYRSKFSQPKSGTPDAEKQGSKKLRRWF 954


>ref|XP_006487346.1| PREDICTED: RNA-binding protein 28-like isoform X3 [Citrus sinensis]
          Length = 933

 Score =  724 bits (1868), Expect = 0.0
 Identities = 430/832 (51%), Positives = 529/832 (63%), Gaps = 55/832 (6%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HSPS + V+NLP SFT+ QL + FSD GP ++RCFMV +KGSN HRG G+VQF   EDA 
Sbjct: 15   HSPSTVFVNNLPYSFTNSQLEEAFSDVGP-IRRCFMVTKKGSNEHRGFGYVQFAVMEDAN 73

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLK-TNKVNADD------------QGTAK- 2116
             A E+KNG  VGG+KI V+ A  RA+L+QRR K T +V A+D             G  K 
Sbjct: 74   RAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQAEDIEKTMDNKDGVISGAEKH 133

Query: 2115 ----------------ALVPLDIVATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKE 1984
                            A + +D+ A K   S+KQRVARTVI GGL NAD+AEEV    + 
Sbjct: 134  SSKLLESGKTVKPRKAATLGIDL-ADKENCSQKQRVARTVIIGGLLNADMAEEV---HRL 189

Query: 1983 VEKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGAS 1804
               +  V SV YPLPK++LEQH LA++GCKMDA+AVLYT+VKSA  +V+ LHQ+EIKG +
Sbjct: 190  AGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEIKGGT 249

Query: 1803 VWARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFA 1624
            VWARQLGGEGSKT+KWKLIVRNIPF+AK NEIK++FS  G VWNV IP   DTGLSKGFA
Sbjct: 250  VWARQLGGEGSKTQKWKLIVRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFA 309

Query: 1623 FITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNGLQHREEEDE 1444
            F+ FTCK+DAE+AI+K NGQ FG RPIAVDWAVPK IY +G  A      G       D 
Sbjct: 310  FVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKG-------DG 362

Query: 1443 TSNDNIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMIT 1264
             S+   +D +G  D ++    +   ++E  D+  N       DF++E DIA KV  N +T
Sbjct: 363  NSDSGSDDDLGDDDAETASDDSN--SSEKEDLPSN------ADFDEEVDIARKVL-NKLT 413

Query: 1263 SEGKGNLDSIGEDSALPPSKELT----TTMEKAAV---------RVKPKWPGMTEHTEHA 1123
            S   G+L S+ +DSAL    +      T  E A V         + KPK    TE  +  
Sbjct: 414  ST-TGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGED-- 470

Query: 1122 KMEEQQRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXX 943
               E Q T+FI NLPFD  +E+VKQRFS FG+V SF+PVLH+VT+RP GTGFLKF T   
Sbjct: 471  ---ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 527

Query: 942  XXXXXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGII 763
                      T    I LKGRQLTV KA DKK AHD ++DK+K+E  D RNLYLAKEG+I
Sbjct: 528  ATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLI 587

Query: 762  LEGSPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFV 583
            LEG+PAAEGVS  DMSKR +L + K  KLQSPNFHVSRTRL++YNLP ++++K LKK+ +
Sbjct: 588  LEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI 647

Query: 582  DAVLSRASKQTPVIQQIKFLNETKAAKA-TKNYSRRVAFIQFTEHQHALVALRVLNNNPE 406
            DAV+SRASKQ PVI+QIKFL   K  K  TK+YSR VAF++FTEHQHALVALRVLNNNP+
Sbjct: 648  DAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPK 707

Query: 405  TFGPERRPIIEFALDNIQTLKLRQRKLAYWSTEK---------PNKKVSSRLNSKSADAP 253
            TFGPE RPI+EFA+DN+QTLK R  K+     +          PNK   SR      D+ 
Sbjct: 708  TFGPEHRPIVEFAVDNVQTLKQRNAKIQAQQQQNDESNTMDTYPNKLEKSRKRKPIGDSR 767

Query: 252  ELK--SEDAEMVQKKRKFQGKINLEQPRKGKFPNKTKKRSKTGGDEGVDKLD 103
              K      + V      +GKIN     K    NK +K +    +  V   D
Sbjct: 768  SEKDSGHGEDSVVNDGVQEGKIN-----KKHKANKKQKHNPASDEAEVSLRD 814



 Score = 68.9 bits (167), Expect = 3e-08
 Identities = 41/101 (40%), Positives = 55/101 (54%)
 Frame = -3

Query: 309  EKPNKKVSSRLNSKSADAPELKSEDAEMVQKKRKFQGKINLEQPRKGKFPNKTKKRSKTG 130
            +KP+ + S++ N          SE A    +KRK   +       K     + KK   T 
Sbjct: 834  QKPDVETSTKGNDARKSN---SSEQAHFRSQKRKLGYQTEGLVGDKSMKRKRPKKNKDTA 890

Query: 129  GDEGVDKLDVLVEQYRSKFSQHIVYKTAGEKQGSRQLKRWF 7
            G E VDKLDVL+E+YR+KFSQ    K  G+KQGS+QL+RWF
Sbjct: 891  GREAVDKLDVLIEKYRAKFSQQGSNKPDGDKQGSKQLRRWF 931


>ref|XP_006423392.1| hypothetical protein CICLE_v10027768mg [Citrus clementina]
            gi|557525326|gb|ESR36632.1| hypothetical protein
            CICLE_v10027768mg [Citrus clementina]
          Length = 933

 Score =  723 bits (1867), Expect = 0.0
 Identities = 429/832 (51%), Positives = 529/832 (63%), Gaps = 55/832 (6%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HSPS + V+NLP SFT+ QL + FSD GP ++RCFMV +KGSN HRG G+VQF   EDA 
Sbjct: 15   HSPSTVFVNNLPYSFTNSQLEEAFSDVGP-IRRCFMVTKKGSNEHRGFGYVQFAVMEDAN 73

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLK-TNKVNADD------------QGTAK- 2116
             A E+KNG  VGG+KI V+ A  RA+L+QRR K T +V ADD             G  K 
Sbjct: 74   RAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQADDIEKTMDNKDDVISGAEKH 133

Query: 2115 ----------------ALVPLDIVATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKE 1984
                            A + +D+ A K   S+KQRVARTVI GGL NAD+AEEV    + 
Sbjct: 134  SSKLLESGKTVKPRKAATLGIDL-ADKEDCSQKQRVARTVIIGGLLNADMAEEV---HRL 189

Query: 1983 VEKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGAS 1804
               +  V SV YPLPK++LEQH LA++GCKMDA+AVLYT+VKSA  +V+ LHQ+EIKG +
Sbjct: 190  AGSIGTVCSVTYPLPKEELEQHGLAQEGCKMDASAVLYTTVKSACASVALLHQKEIKGGT 249

Query: 1803 VWARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFA 1624
            VWARQLGGEGSKT+KWKLI+RNIPF+AK NEIK++FS  G VWNV IP   DTGLSKGFA
Sbjct: 250  VWARQLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFA 309

Query: 1623 FITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNGLQHREEEDE 1444
            F+ FTCK+DAE+AI+K NGQ FG RPIAVDWAVPK IY +G  A      G       D 
Sbjct: 310  FVKFTCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGVQNKG-------DG 362

Query: 1443 TSNDNIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMIT 1264
             S+   +D +G  D ++    +   ++E  D+  N       DF++E DIA KV  N +T
Sbjct: 363  NSDSGSDDDLGDDDAETASDDSN--SSEKEDLPSN------ADFDEEVDIARKVL-NKLT 413

Query: 1263 SEGKGNLDSIGEDSALPPSKELT----TTMEKAAV---------RVKPKWPGMTEHTEHA 1123
            S   G+L S+ +DSAL    +      T  E A V         + KPK    TE  +  
Sbjct: 414  ST-TGSLPSLSDDSALVKGNKEQDSDKTVNESAKVSDVSKLNSSKSKPKSLKQTEGED-- 470

Query: 1122 KMEEQQRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXX 943
               E Q T+FI NLPFD  +E+VKQRFS FG+V SF+PVLH+VT+RP GTGFLKF T   
Sbjct: 471  ---ELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 527

Query: 942  XXXXXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGII 763
                      T    I LKGRQLTV KA DKK AHD ++DK+K+E  D RNLYLAKEG+I
Sbjct: 528  ATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEMDKSKNETNDHRNLYLAKEGLI 587

Query: 762  LEGSPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFV 583
            LEG+PAAEGVS  DMSKR +L + K  KLQSPNFHVSRTRL++YNLP ++++K LKK+ +
Sbjct: 588  LEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI 647

Query: 582  DAVLSRASKQTPVIQQIKFLNETKAAKA-TKNYSRRVAFIQFTEHQHALVALRVLNNNPE 406
            DAV+SRA+KQ PVI+QIKFL   K  K  TK+YSR VAF++FTEHQHALVALRVLNNNP+
Sbjct: 648  DAVVSRATKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPK 707

Query: 405  TFGPERRPIIEFALDNIQTLKLRQRKLAYWSTEK---------PNKKVSSRLNSKSADAP 253
            TFGPE RPI+EFA+DN+QTLK R  K+     +          PNK   SR      D+ 
Sbjct: 708  TFGPEHRPIVEFAVDNVQTLKQRNAKIQAQQQQNVESNTMDTYPNKLEKSRKRKPIGDSR 767

Query: 252  ELK--SEDAEMVQKKRKFQGKINLEQPRKGKFPNKTKKRSKTGGDEGVDKLD 103
              K      + V      +GKIN     K    NK +K +    +  V   D
Sbjct: 768  SEKDSGHGEDSVVNDGVQEGKIN-----KKHKANKKQKHNPASDEAEVSLRD 814



 Score = 66.2 bits (160), Expect = 2e-07
 Identities = 40/101 (39%), Positives = 54/101 (53%)
 Frame = -3

Query: 309  EKPNKKVSSRLNSKSADAPELKSEDAEMVQKKRKFQGKINLEQPRKGKFPNKTKKRSKTG 130
            +KP+ + S++ N          SE A    +KRK   +       K     + KK   T 
Sbjct: 834  QKPDVETSTKGNDARKSN---SSEQAHFRSQKRKLGYQTEGLVGDKSMKRKRPKKNKDTA 890

Query: 129  GDEGVDKLDVLVEQYRSKFSQHIVYKTAGEKQGSRQLKRWF 7
            G E VDKLDVL+E+YR+KFSQ    K  G +QGS+QL+RWF
Sbjct: 891  GREAVDKLDVLIEKYRTKFSQQGSNKPDGGRQGSKQLRRWF 931


>gb|KJB79121.1| hypothetical protein B456_013G034200 [Gossypium raimondii]
          Length = 947

 Score =  717 bits (1850), Expect = 0.0
 Identities = 416/840 (49%), Positives = 539/840 (64%), Gaps = 40/840 (4%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HSP+ + V+NL  SFT+ QL +TFSD GP ++RCFMV +KGS  HRG+ FVQF   EDA 
Sbjct: 15   HSPATVFVTNLAYSFTNSQLEETFSDVGP-IRRCFMVTKKGSTEHRGIAFVQFAVAEDAN 73

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNA-----DDQGTA---------- 2119
             A ELKNG+ VGG+KI V+ A  RA+L+QRR K  + +A     D  G            
Sbjct: 74   RAIELKNGSSVGGRKIGVKHAMHRASLEQRRSKATQDDATKTKNDKDGLLTSAVEAHGSD 133

Query: 2118 -----------KALVPLDIVATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKEVEKV 1972
                       KA      +A K   SEKQRVARTV+FGGL NA++AE+V   AKE+   
Sbjct: 134  LPKLEKPVQPKKAATLCSDLADKENCSEKQRVARTVVFGGLRNAEMAEDVHRLAKEIG-- 191

Query: 1971 ENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGASVWAR 1792
              V +V YPLPK++LE+H LA+DGCKMDA+AVL+TSVKSA  AV+ LHQ+EI G+ VWAR
Sbjct: 192  -TVCAVTYPLPKEELEEHGLAQDGCKMDASAVLFTSVKSAHTAVAMLHQKEIHGSIVWAR 250

Query: 1791 QLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFAFITF 1612
            QLGGEGSKT+KWKLI+RN+ F+AK +EIK++FS+AGFVW+V IP   +TGLSKGFAF+ F
Sbjct: 251  QLGGEGSKTQKWKLIIRNLSFKAKLSEIKDMFSAAGFVWDVFIPHNSETGLSKGFAFVKF 310

Query: 1611 TCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNGLQHREEEDETSND 1432
            T KQDAENAI+K NG+    RPIAVDWAVPKK+Y  G          L ++EEE + S+ 
Sbjct: 311  TSKQDAENAIQKFNGKTLCKRPIAVDWAVPKKLYSAGGQ--------LNNKEEESDGSSI 362

Query: 1431 NIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMITSEGK 1252
            ++ED  G  D  S        A+ +S+++     +  VDF+KE DIA KV  N++TS  K
Sbjct: 363  DMEDEGGDSDNDSDD----GIASNDSNMSEMERTSTAVDFDKEVDIARKVLNNLVTSSSK 418

Query: 1251 GNLDSIGEDSALPPSKELTTTMEKAAVR-------------VKPKWPGMTEHTEHAKMEE 1111
             +L S+ +   LP S++ T   E   V+              KP+  G  +  +    EE
Sbjct: 419  DSL-SLQDHGVLPKSEDNTNVDETINVQNKLPIESAIGSDVSKPEKSGTNKQID--SEEE 475

Query: 1110 QQRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXXXXXX 931
             QRTVFI NLPFD  +++VK+RFS FG+VQSF+PVLH VT+RP GTGFLKF T       
Sbjct: 476  LQRTVFISNLPFDIDNKEVKERFSGFGEVQSFIPVLHPVTKRPRGTGFLKFKTIDAATAA 535

Query: 930  XXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGIILEGS 751
                 A+    I LKGRQ+ V KA D+KSAHD +L+KAK+E  D RNLYLAKEG+I+EG+
Sbjct: 536  VSAANASSGLGIFLKGRQIKVLKALDRKSAHDKELEKAKAEEHDLRNLYLAKEGLIVEGT 595

Query: 750  PAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFVDAVL 571
            PAA+ VS+ DM KR +L + K  KLQSPNFHVS+TRL++YNLP ++++ +LK++ +DAV 
Sbjct: 596  PAAKDVSASDMEKRQMLHEKKMTKLQSPNFHVSKTRLVIYNLPKSMTENELKQLCIDAVT 655

Query: 570  SRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALRVLNNNPETFGP 394
            SRA+KQ PVI+QIKFL   K  K   KN SR VAF++FTEHQHALVALRVLNNNPETFG 
Sbjct: 656  SRATKQKPVIRQIKFLKTVKKGKIVVKNQSRGVAFVEFTEHQHALVALRVLNNNPETFGS 715

Query: 393  ERRPIIEFALDNIQTLKLRQRKLAYWSTEKPNKKVSSRLNSKSADAPELKSEDAEMVQKK 214
            E RPI+EFA+DN+QTLKLR+ KL     +   +  S  LN            DA+   K 
Sbjct: 716  EHRPIVEFAVDNVQTLKLRKAKL-----QAQQQDASDDLN------------DAQQNAKA 758

Query: 213  RKFQGKINLEQPRKGKFPNKTKKRSKTGGDEGVDKLDVLVEQYRSKFSQHIVYKTAGEKQ 34
              F    N  + RK +   +  K S+    E    ++ +V     + S+   +K  GEK+
Sbjct: 759  YPFDDHTNKSRKRKSRDDQRATKHSELKKAE----MENVVATEEGQASKKPKHKPTGEKR 814



 Score = 61.6 bits (148), Expect = 5e-06
 Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
 Frame = -3

Query: 306  KPNKKVSSRLNSKSADAPELKSEDAEMVQ--KKRKFQGKINLEQPRKGKFPNKTKKRSKT 133
            KP    S ++ +   +  +LK ++ + +   K+R  Q K   E+        + K+    
Sbjct: 844  KPAVGSSDKVETNVNETSKLKLKEVKAISHPKERTRQEKAKPEEGETNLKRKRPKRNKDP 903

Query: 132  GGDEGVDKLDVLVEQYRSKFSQHIVYKTAGEKQGSRQLKRWF 7
             G + VDKLD+L+EQYRSKFSQ        EKQGS++L+RWF
Sbjct: 904  SGRDVVDKLDMLIEQYRSKFSQPKSGTPDAEKQGSKKLRRWF 945


>ref|XP_002313773.2| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|550331582|gb|EEE87728.2| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 974

 Score =  716 bits (1849), Expect = 0.0
 Identities = 428/869 (49%), Positives = 542/869 (62%), Gaps = 63/869 (7%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HS S + VS+LP SFT  QL +TFSD GP ++RCFMV +KGS  HRG GFVQF   +DA 
Sbjct: 16   HSSSTLFVSSLPYSFTKSQLEETFSDVGP-IRRCFMVTQKGSTEHRGFGFVQFALKDDAN 74

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNADDQGTA-KALVPLDIVATK-- 2083
             A E+KNG+ VGG+KIAV+ A  RA+L+QRR K  +     Q  A K +     VA+K  
Sbjct: 75   RAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQGQGQVQDDATKTIDEKGSVASKPE 134

Query: 2082 ---------------------GKP-------------------SEKQRVARTVIFGGLTN 2023
                                  KP                   SEKQRVARTVIFGGL N
Sbjct: 135  KHVLNVLESGWELWYILSCMLRKPREPRKPAKLVTDLTDKENCSEKQRVARTVIFGGLLN 194

Query: 2022 ADVAEEVICRAKEVEKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVA 1843
              +AE+V  RAKE      V SV YPLPK++L++H L +DGC+  A+AVL+TSVK AR +
Sbjct: 195  DAMAEDVHQRAKE---TGTVCSVTYPLPKEELKKHGLEQDGCRSGASAVLFTSVKEARSS 251

Query: 1842 VSKLHQQEIKGASVWARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSI 1663
            V+ LHQ+EIKG  VWARQLGGEG KT+KWKLI+RN+PF+AK NEIK +F SAG VW+V +
Sbjct: 252  VAMLHQKEIKGGIVWARQLGGEGCKTQKWKLIIRNLPFKAKPNEIKGVFESAGCVWDVFV 311

Query: 1662 PQAPDTGLSKGFAFITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDS 1483
            P   +TGLSKGFAF+ FTCKQDAENAI+K NGQ FG RPIAVDWAVPKKIY +GAN   +
Sbjct: 312  PHNSETGLSKGFAFVKFTCKQDAENAIQKFNGQKFGKRPIAVDWAVPKKIYSSGANVSAA 371

Query: 1482 YKNG---LQHREEED--------ETSNDNIEDVIGGRDRKSQQPQAGDTATENSDVTLNY 1336
             ++G     H+ E+D        +  +DN  DVIG    K QQ       + +SD++   
Sbjct: 372  SEDGNASAGHQNEKDSSCEDSDYDDEDDNDTDVIG----KKQQHDGVVVTSPDSDLSEKE 427

Query: 1335 GPAEVVDFEKEYDIASKVCTNMITS------EGKGNLDSIGEDSALPPSKELTTTMEKAA 1174
                 VDFE+E DIA KV  N+I S      +G   L+++   S LP   E  +    ++
Sbjct: 428  DMPTEVDFEQEADIARKVLRNLIASSSDVLPKGIEELETVDVPSKLPGESENLSGSPLSS 487

Query: 1173 VRVKPKWPGMTEHTEHAKMEEQ-QRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHK 997
             + KP       +T+H   E+  QRTVFI NLPFD  S +VKQRFS FG+V SF+PVLH+
Sbjct: 488  GKSKP------SNTKHIDGEDDLQRTVFISNLPFDVESGEVKQRFSAFGEVLSFVPVLHQ 541

Query: 996  VTRRPTGTGFLKFSTXXXXXXXXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKA 817
            VT+RP GTGFLKF T                  I LKGRQLTV KA DKKSAHD + +K 
Sbjct: 542  VTKRPRGTGFLKFKTADGATAAVSAANVASGLGIFLKGRQLTVLKALDKKSAHDKEKEKT 601

Query: 816  KSEHVDQRNLYLAKEGIILEGSPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLI 637
            K E  D RNLYLAKEG+ILEG+PAAEGVS  DM+KR+ L++ K  KL+SPNFHVSRTRL+
Sbjct: 602  KIEDRDHRNLYLAKEGLILEGTPAAEGVSISDMAKRNRLQEEKMTKLRSPNFHVSRTRLV 661

Query: 636  VYNLPNAISQKQLKKIFVDAVLSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQF 460
            VYNLP ++++KQLKK+F+DAV SRA+KQ PVI+Q+KFL   K  K  TK++SR VAF++F
Sbjct: 662  VYNLPKSMTEKQLKKLFIDAVTSRATKQKPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEF 721

Query: 459  TEHQHALVALRVLNNNPETFGPERRPIIEFALDNIQTLKLRQRKLAYWSTEKPNKKVSSR 280
            TEHQHALVALRVLNNNPETFGPE RPI+ FALDN+QTLKLR+ KL     ++ +K     
Sbjct: 722  TEHQHALVALRVLNNNPETFGPEHRPIVSFALDNVQTLKLRKAKLQV-QQQETHKDFQDT 780

Query: 279  LNSKSADAPELKSEDAEMVQKKRKFQGKINLEQPRKGKFPN-KTKKRSKTGGDEGVDKLD 103
              +  +  P       EM +K++       ++ P   +    K K   +T   E   K  
Sbjct: 781  QENDESQTPNAIPSQKEMSRKRKSRVENRAVKDPESNRMDEVKNKDSYRTSLKEQTAK-- 838

Query: 102  VLVEQYRSKFSQHIVYKTAGEKQGSRQLK 16
                + +S      +  +A +K+ SR+ K
Sbjct: 839  ----KKKSNPGAEDIQTSAKDKRESRKQK 863



 Score = 62.8 bits (151), Expect = 2e-06
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
 Frame = -3

Query: 279  LNSKSADAPELKSEDAEMVQKKRKFQGKINLEQPRKGKFPNKTKKRSKTG---GDEGVDK 109
            +NS+    P  K  D  + ++KR  Q     E+ + GK   K K+  K     G +  DK
Sbjct: 884  VNSEKIVKP-FKEADLWLTKRKRPNQ----TEENKGGKSSEKRKRPKKNKDPVGQDVADK 938

Query: 108  LDVLVEQYRSKFSQHIVYKTAGEKQGSRQLKRWF 7
            LD+L+EQY+SKFS+    K  GEKQ ++QLKRWF
Sbjct: 939  LDMLIEQYKSKFSKQTADKPEGEKQANKQLKRWF 972


>ref|XP_012067208.1| PREDICTED: RNA-binding protein 28 [Jatropha curcas]
            gi|643735107|gb|KDP41748.1| hypothetical protein
            JCGZ_26766 [Jatropha curcas]
          Length = 974

 Score =  716 bits (1847), Expect = 0.0
 Identities = 410/809 (50%), Positives = 532/809 (65%), Gaps = 49/809 (6%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HSP+ + VSNLP SFT+ QL + FSD GP ++RCF+V +KGS  HRG GFVQF   EDA 
Sbjct: 20   HSPNTVFVSNLPRSFTNSQLEEVFSDVGP-IRRCFIVAQKGSTEHRGFGFVQFAIKEDAN 78

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNADDQGTAKAL------VPLDI- 2095
             A ELKNG+ V G+K+AV+ A  RA L+QRR K  +V  D  G  K+       V  D+ 
Sbjct: 79   RAIELKNGSSVDGQKVAVKHAISRAPLEQRRAKAAQV-VDSDGAIKSQSDDISKVDTDVS 137

Query: 2094 --------------------VATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKEVEK 1975
                                +A K   SEKQRVARTVIFGGL N  +AEEV  RAKE   
Sbjct: 138  NSEKSGEHLKPRKAAKLSIELADKENCSEKQRVARTVIFGGLLNDAMAEEVHRRAKEAG- 196

Query: 1974 VENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGASVWA 1795
              NV SV YPLP+++L QH LA+DGC++ A+AVLY SVK AR +V+ LHQ+EI G +VWA
Sbjct: 197  --NVCSVTYPLPEKELAQHGLAQDGCRLSASAVLYASVKEARFSVAMLHQKEINGGTVWA 254

Query: 1794 RQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFAFIT 1615
            RQLGGEGSK +KWKLIVRN+PF+AK +EIK++FSSAGFVW+V IP   +TGLSKGFAF+ 
Sbjct: 255  RQLGGEGSKIQKWKLIVRNLPFKAKASEIKDVFSSAGFVWDVFIPHNSETGLSKGFAFVK 314

Query: 1614 FTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNGLQHREEEDETSN 1435
            FTCKQ AENAI+K N Q +G RP+AVDWAVPKKIY +GAN   + ++G Q   + D +S+
Sbjct: 315  FTCKQHAENAIQKFNAQMYGKRPMAVDWAVPKKIYSSGANLSVASEDGHQSESDSDISSD 374

Query: 1434 D---NIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMIT 1264
            D     +D     DRKS+Q    + A +NSD+         VDF+ E DIA KV   ++ 
Sbjct: 375  DLEEEQDDDGNIDDRKSKQHDEVNVAPDNSDLFEKKHMPTEVDFDAEADIARKVLQTLMN 434

Query: 1263 SEGKGNLDSIGEDSALPPSKELTTTMEKAAVRVKPK-------WPGMTEHTEHAKM---- 1117
            S  K +  S  +DS LP   +   T++  + +            PG +  +  A +    
Sbjct: 435  SSSKASAPSDVDDSILPKGNKTDETVDVPSKKSNKHENFSGAFLPGDSGKSSAADVKKTD 494

Query: 1116 ---EEQQRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXX 946
               ++ QRTVFI N+PF+  +E+VKQRFS FG V+SF+PVLH+VT+RP GTGFLKF T  
Sbjct: 495  TEDDDLQRTVFISNIPFEIDNEEVKQRFSAFGKVKSFVPVLHQVTKRPRGTGFLKFETED 554

Query: 945  XXXXXXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAK-SEHVDQRNLYLAKEG 769
                            ILLKGRQL V KA DKK+A D + +KAK  +  D RNLYLAKEG
Sbjct: 555  AATAAVSAANIASGLGILLKGRQLKVLKALDKKAARDKETEKAKIVDSQDHRNLYLAKEG 614

Query: 768  IILEGSPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKI 589
            +ILEG+PA+EG+S+ DM+KR  L + K IKL+SPNFHVSRTRL++YNLP+++++K+LKK+
Sbjct: 615  LILEGTPASEGISASDMAKRKALHEKKMIKLRSPNFHVSRTRLVIYNLPHSVNEKKLKKL 674

Query: 588  FVDAVLSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALRVLNNN 412
             ++AV+SRA+KQ PVI+QIK L   K  K  TKN+SR VAFI+FTEHQHALVALRVLNNN
Sbjct: 675  CINAVISRATKQNPVIRQIKLLKSVKNGKVVTKNHSRGVAFIEFTEHQHALVALRVLNNN 734

Query: 411  PETFGPERRPIIEFALDNIQTLKLRQRKLAYWSTEKPNKKVSSR---LNSKSADAPELKS 241
            P+TFGPE RPI+EFA+DN+Q LKLR+ KL     E  +    ++   ++++ +D P  K 
Sbjct: 735  PDTFGPEHRPIVEFAVDNVQKLKLRKAKLQAQQQESHDDLADTQDGTVSNEPSDVPRKKE 794

Query: 240  EDAEMVQKKRKFQGKINLEQPRKGKFPNK 154
                   +KRK + +   ++P K   PNK
Sbjct: 795  N-----SRKRKSRDE---KKPAKNSEPNK 815



 Score = 65.9 bits (159), Expect = 2e-07
 Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
 Frame = -3

Query: 309  EKPNKKVSSRLNSKSADAPELKSEDAEMVQKKRKFQGKINLEQPRKG-KFPNKTKKRSKT 133
            EKP+   S R  +         SE+  +  KKRK   +   EQ  +  K  N+ KK    
Sbjct: 874  EKPDASSSKREMTTKNTRESKSSEEKGVRLKKRKLPDQA--EQGEESLKKRNRPKKNKDP 931

Query: 132  GGDEGVDKLDVLVEQYRSKFSQHIVYKTAGEKQGSRQLKRWF 7
             G + VDKLD+L+EQYRSKFS+    K+ GEKQ  + LKRWF
Sbjct: 932  VGRDVVDKLDMLIEQYRSKFSKQSSEKSDGEKQAKKPLKRWF 973


>ref|XP_007042088.1| RNA-binding family protein, putative [Theobroma cacao]
            gi|508706023|gb|EOX97919.1| RNA-binding family protein,
            putative [Theobroma cacao]
          Length = 953

 Score =  716 bits (1847), Expect = 0.0
 Identities = 407/808 (50%), Positives = 531/808 (65%), Gaps = 45/808 (5%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HSPS + V+NLP SFT+ QL +TFSD GP ++RCFMV +KGS  HRG GFVQF  TEDA 
Sbjct: 15   HSPSTVFVTNLPYSFTNSQLEETFSDVGP-IRRCFMVTKKGSTEHRGFGFVQFAVTEDAN 73

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLK----------------TNKVNADDQGT 2122
             A +LKNG+ +GG+KI V+ A  RA L+QRR K                T+ VN      
Sbjct: 74   RAIDLKNGSSIGGRKIGVKHAMHRAPLEQRRSKATQDDGTKTKDDKDGFTSTVNEHGSNP 133

Query: 2121 AKALVPLDI---------VATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKEVEKVE 1969
             K   P+           +A K   S KQRVARTVIFGGL N ++AE+V   AKE     
Sbjct: 134  PKLEKPVQPRKAATLCADLADKENCSGKQRVARTVIFGGLLNNEMAEDVHRCAKESG--- 190

Query: 1968 NVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGASVWARQ 1789
             V +V YPLPK++LE+H LA+DGCKMDA+AVL+TS+KSAR  V+ LHQ+EI+G  VWARQ
Sbjct: 191  TVCAVTYPLPKEELERHGLAQDGCKMDASAVLFTSIKSARAVVAMLHQKEIQGGIVWARQ 250

Query: 1788 LGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFAFITFT 1609
            LGGEGSKT+KWK+I+RN+P++AK NEI+++FSSAGFVW+V IP   +TGLSKGFAF+ FT
Sbjct: 251  LGGEGSKTQKWKIIIRNLPYKAKVNEIRDMFSSAGFVWDVFIPYNSETGLSKGFAFVKFT 310

Query: 1608 CKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNGLQHR-EEEDETSND 1432
            CKQDAENAI+K NGQ F  RPIAVDWAVPKK+Y  GANA  +   G  H  +EE ++S+ 
Sbjct: 311  CKQDAENAIQKFNGQKFAKRPIAVDWAVPKKLYSGGANAAVASDGGQLHEGDEESDSSSI 370

Query: 1431 NIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMITSEGK 1252
            ++ED  G  D        G  A+++S++         +DF+ E DIA KV  N++TS   
Sbjct: 371  DMEDEGGDGDND------GGIASDDSNMLDTARAPTAIDFDMEADIARKVLNNLVTSSHD 424

Query: 1251 GNL-----DSIGEDSALPPSKELTTTMEKAAVRVKPKWPGMTEHTEHAKM------EEQQ 1105
              +     D +  D  +    +   ++ ++A+      P  +   + A +      ++ Q
Sbjct: 425  DAVLPKRDDELNVDETINVQNK---SLIESAIGSDMTKPEKSSKNKQANIKLTDGEDDLQ 481

Query: 1104 RTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXXXXXXXX 925
            RT+FI NLPFD   ++VK+RFS FG+VQ FLPVLH VT+RP GTGFLKF T         
Sbjct: 482  RTIFISNLPFDIDDKEVKERFSGFGEVQYFLPVLHPVTKRPRGTGFLKFKTIDAAIAAVS 541

Query: 924  XXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGIILEGSPA 745
               A     I LKGRQL V KA D+KSAHD +L+KAK E  D RNLYLAKEG+I+EG+P 
Sbjct: 542  AVNAASGLGIFLKGRQLKVLKALDRKSAHDKELEKAKVEEHDHRNLYLAKEGLIVEGTPP 601

Query: 744  AEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFVDAVLSR 565
            A+ VS+ DM KR +L + K  KLQSPNFHVS+TRLI+YNLP ++++K+LK++ +DAV+SR
Sbjct: 602  AKDVSASDMEKRKMLHEKKMTKLQSPNFHVSKTRLIIYNLPKSMTEKELKQLCIDAVISR 661

Query: 564  ASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALRVLNNNPETFGPER 388
            A+KQ PVI+QIKFL   K  K   KN SR VAF++FTEHQHALVALRVLNNNPETFGPE 
Sbjct: 662  ATKQKPVIRQIKFLKSVKKGKLVIKNQSRGVAFVEFTEHQHALVALRVLNNNPETFGPEH 721

Query: 387  RPIIEFALDNIQTLKLRQRKLAYWSTEKPNKKVSSRLNSKS-------ADAPELKSEDAE 229
            RPI+EFA+DN+QTLKLR+ KL     +  +   +++ N++S         + + KS D +
Sbjct: 722  RPIVEFAVDNVQTLKLRKAKLQAQQLDGRDDMNNAQQNAESNSFDAHPTKSRKRKSRDDK 781

Query: 228  MVQKKRKFQGKINLEQPRKGKFPNKTKK 145
             V K+ +F+ K  +E     +    TKK
Sbjct: 782  RVTKQPEFK-KAEMENAVAAEDGQATKK 808



 Score = 65.5 bits (158), Expect = 3e-07
 Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
 Frame = -3

Query: 306  KPNKKVSSRLNSKSADAPELKS---EDAEMVQKKRKFQGKINLEQPRKGKFPNKTKKRSK 136
            KP+   S ++ + + D  + KS    +A +  K+R  Q +   ++  K     +++K+  
Sbjct: 849  KPDIGSSDKVQTTANDTRKSKSFKEMEAVLQPKERMPQQQAKQQEGEKSSKRKRSQKKKN 908

Query: 135  TGGDEGVDKLDVLVEQYRSKFSQHIVYKTAGEKQGSRQLKRWF 7
              G + VDKLD+L+EQYRSKFSQ        EKQGS++L+RWF
Sbjct: 909  PSGRDVVDKLDMLIEQYRSKFSQPKSETAGAEKQGSKKLRRWF 951


>ref|XP_010028624.1| PREDICTED: RNA-binding protein 28 [Eucalyptus grandis]
            gi|629089132|gb|KCW55385.1| hypothetical protein
            EUGRSUZ_I01295 [Eucalyptus grandis]
          Length = 970

 Score =  715 bits (1845), Expect = 0.0
 Identities = 413/818 (50%), Positives = 528/818 (64%), Gaps = 48/818 (5%)
 Frame = -3

Query: 2445 AYGIHSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKT 2266
            A G HSPS + VSNLP SFT+ QL + FSD GP ++RCFMV +KGSN HRG  FVQF  +
Sbjct: 12   APGAHSPSTVFVSNLPYSFTNAQLEEAFSDVGP-IRRCFMVTKKGSNEHRGFAFVQFAVS 70

Query: 2265 EDAKLATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNADDQGTAK---------- 2116
            EDA  A E +NG+ VGG+KI V+ A  RA L+QRR   N+ +A +   AK          
Sbjct: 71   EDANRAIETRNGSLVGGRKIGVKHAMHRAPLEQRRALVNQDDAVESKKAKDSKSHRTTEP 130

Query: 2115 ---------------ALVPLDIVAT-------KGKPSEKQRVARTVIFGGLTNADVAEEV 2002
                           A V     AT         K SEKQRVART+IFGGL +A +A++V
Sbjct: 131  ALELQEKDRPVVSQKAAVVSQKAATLCRNLSDNEKCSEKQRVARTIIFGGLVSAKMADQV 190

Query: 2001 ICRAKEVEKVENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQ 1822
              +AKE+     V SV YPLP++ LEQH LA+DGC+MDA+AVL+TSVKSAR  V+ LHQ+
Sbjct: 191  HSKAKEIG---TVCSVSYPLPEKDLEQHGLAQDGCRMDASAVLFTSVKSARSVVAMLHQK 247

Query: 1821 EIKGASVWARQLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTG 1642
            EI G +VWARQLGGEGSKT+KWKLI+RN+PF+ K ++IKE+FS+AGFVW+V IPQ  +TG
Sbjct: 248  EINGVTVWARQLGGEGSKTQKWKLIIRNLPFKVKNDDIKEMFSAAGFVWDVFIPQNSETG 307

Query: 1641 LSKGFAFITFTCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGANAVDSYKNGLQH 1462
            LSKGFAF+ FTCK DAENAI K NG  FG R IAVDWAVPKK+Y  G +AV +     Q 
Sbjct: 308  LSKGFAFVKFTCKSDAENAILKFNGSVFGKRTIAVDWAVPKKVY-HGVSAVIAAPTDGQE 366

Query: 1461 REEEDE--TSNDNIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIAS 1288
            RE E+E  +S++++ED +    + +      D   EN D T        ++F+ E DIA 
Sbjct: 367  RETEEEGGSSSEDLEDDVADEGKGTLLSDEDDVGVENPDATGIEDTQAELNFDDEADIAR 426

Query: 1287 KVCTNMITSEGKG---NLDSIGEDSALPPSKELTTTMEKAAVRVKPKWPGMTEHTEHAKM 1117
            KV  N+ITS G+G   N +S+ E      +     T + A   V     G  + +   KM
Sbjct: 427  KVLQNLITSSGRGSHPNSESL-EQLKREENGSSKETNDVAIEAVNCSSVGEAKSSGKHKM 485

Query: 1116 EEQQ---------RTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFL 964
            ++ Q         RT+FI NLPFD  +E+V+QRFS FGDVQSF+PVLHK+T++P GTGFL
Sbjct: 486  KDVQQTDVDDDLLRTIFISNLPFDVDTEEVRQRFSGFGDVQSFVPVLHKITQQPKGTGFL 545

Query: 963  KFSTXXXXXXXXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLY 784
            KF               T    I LKGR LT+ +A DKKSAH  +LDKAK+E  D R+LY
Sbjct: 546  KFKAVDAANAAISAASVTSGVGIFLKGRPLTILRALDKKSAHQKELDKAKTEDHDHRHLY 605

Query: 783  LAKEGIILEGSPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQK 604
            LAKEG+++EGS AAEGVS  DM+KR  LE+ K  KLQSPNFHVSRTRL++YNLP ++++K
Sbjct: 606  LAKEGLVVEGSAAAEGVSESDMAKRKGLEREKMTKLQSPNFHVSRTRLVIYNLPKSMTEK 665

Query: 603  QLKKIFVDAVLSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALR 427
            +LKK+  +AV SRA+KQ P I+QIKFL   K  K  TK++SR VAF++FTEHQHALVALR
Sbjct: 666  ELKKLCFEAVTSRATKQKPDIRQIKFLKNIKKGKVVTKDHSRGVAFVEFTEHQHALVALR 725

Query: 426  VLNNNPETFGPERRPIIEFALDNIQTLKLRQRKLAYWSTEKPNKKVSSRLNSKSADAPE- 250
            VLNNNPETFGP+ RPI+ FALDN+QTLK R+ KL             S LN      PE 
Sbjct: 726  VLNNNPETFGPQHRPIVAFALDNVQTLKQRKAKL--------QALQQSSLNDPEGMGPED 777

Query: 249  LKSEDAEMVQKKRKFQGKINLEQPRKGKFPNKTKKRSK 136
              +       KKRKF+G+   ++  +G + N++ + S+
Sbjct: 778  YDNAPPPNKSKKRKFRGEDRSQKDLQGAYRNESLQPSE 815


>gb|KJB79122.1| hypothetical protein B456_013G034200 [Gossypium raimondii]
          Length = 952

 Score =  714 bits (1844), Expect = 0.0
 Identities = 418/841 (49%), Positives = 540/841 (64%), Gaps = 41/841 (4%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HSP+ + V+NL  SFT+ QL +TFSD GP ++RCFMV +KGS  HRG+ FVQF   EDA 
Sbjct: 15   HSPATVFVTNLAYSFTNSQLEETFSDVGP-IRRCFMVTKKGSTEHRGIAFVQFAVAEDAN 73

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNA-----DDQGTA---------- 2119
             A ELKNG+ VGG+KI V+ A  RA+L+QRR K  + +A     D  G            
Sbjct: 74   RAIELKNGSSVGGRKIGVKHAMHRASLEQRRSKATQDDATKTKNDKDGLLTSAVEAHGSD 133

Query: 2118 -----------KALVPLDIVATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKEVEKV 1972
                       KA      +A K   SEKQRVARTV+FGGL NA++AE+V   AKE+   
Sbjct: 134  LPKLEKPVQPKKAATLCSDLADKENCSEKQRVARTVVFGGLRNAEMAEDVHRLAKEIG-- 191

Query: 1971 ENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGASVWAR 1792
              V +V YPLPK++LE+H    DGCKMDA+AVL+TSVKSA  AV+ LHQ+EI G+ VWAR
Sbjct: 192  -TVCAVTYPLPKEELEEH----DGCKMDASAVLFTSVKSAHTAVAMLHQKEIHGSIVWAR 246

Query: 1791 QLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFAFITF 1612
            QLGGEGSKT+KWKLI+RN+ F+AK +EIK++FS+AGFVW+V IP   +TGLSKGFAF+ F
Sbjct: 247  QLGGEGSKTQKWKLIIRNLSFKAKLSEIKDMFSAAGFVWDVFIPHNSETGLSKGFAFVKF 306

Query: 1611 TCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGAN-AVDSYKNGLQHREEEDETSN 1435
            T KQDAENAI+K NG+    RPIAVDWAVPKK+Y  G N AV S    L ++EEE + S+
Sbjct: 307  TSKQDAENAIQKFNGKTLCKRPIAVDWAVPKKLYSAGGNTAVTSDDGQLNNKEEESDGSS 366

Query: 1434 DNIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMITSEG 1255
             ++ED  G  D  S        A+ +S+++     +  VDF+KE DIA KV  N++TS  
Sbjct: 367  IDMEDEGGDSDNDSDD----GIASNDSNMSEMERTSTAVDFDKEVDIARKVLNNLVTSSS 422

Query: 1254 KGNLDSIGEDSALPPSKELTTTMEKAAVR-------------VKPKWPGMTEHTEHAKME 1114
            K +L S+ +   LP S++ T   E   V+              KP+  G  +  +    E
Sbjct: 423  KDSL-SLQDHGVLPKSEDNTNVDETINVQNKLPIESAIGSDVSKPEKSGTNKQID--SEE 479

Query: 1113 EQQRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXXXXX 934
            E QRTVFI NLPFD  +++VK+RFS FG+VQSF+PVLH VT+RP GTGFLKF T      
Sbjct: 480  ELQRTVFISNLPFDIDNKEVKERFSGFGEVQSFIPVLHPVTKRPRGTGFLKFKTIDAATA 539

Query: 933  XXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGIILEG 754
                  A+    I LKGRQ+ V KA D+KSAHD +L+KAK+E  D RNLYLAKEG+I+EG
Sbjct: 540  AVSAANASSGLGIFLKGRQIKVLKALDRKSAHDKELEKAKAEEHDLRNLYLAKEGLIVEG 599

Query: 753  SPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFVDAV 574
            +PAA+ VS+ DM KR +L + K  KLQSPNFHVS+TRL++YNLP ++++ +LK++ +DAV
Sbjct: 600  TPAAKDVSASDMEKRQMLHEKKMTKLQSPNFHVSKTRLVIYNLPKSMTENELKQLCIDAV 659

Query: 573  LSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALRVLNNNPETFG 397
             SRA+KQ PVI+QIKFL   K  K   KN SR VAF++FTEHQHALVALRVLNNNPETFG
Sbjct: 660  TSRATKQKPVIRQIKFLKTVKKGKIVVKNQSRGVAFVEFTEHQHALVALRVLNNNPETFG 719

Query: 396  PERRPIIEFALDNIQTLKLRQRKLAYWSTEKPNKKVSSRLNSKSADAPELKSEDAEMVQK 217
             E RPI+EFA+DN+QTLKLR+ KL     +   +  S  LN            DA+   K
Sbjct: 720  SEHRPIVEFAVDNVQTLKLRKAKL-----QAQQQDASDDLN------------DAQQNAK 762

Query: 216  KRKFQGKINLEQPRKGKFPNKTKKRSKTGGDEGVDKLDVLVEQYRSKFSQHIVYKTAGEK 37
               F    N  + RK +   +  K S+    E    ++ +V     + S+   +K  GEK
Sbjct: 763  AYPFDDHTNKSRKRKSRDDQRATKHSELKKAE----MENVVATEEGQASKKPKHKPTGEK 818

Query: 36   Q 34
            +
Sbjct: 819  R 819



 Score = 61.6 bits (148), Expect = 5e-06
 Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
 Frame = -3

Query: 306  KPNKKVSSRLNSKSADAPELKSEDAEMVQ--KKRKFQGKINLEQPRKGKFPNKTKKRSKT 133
            KP    S ++ +   +  +LK ++ + +   K+R  Q K   E+        + K+    
Sbjct: 849  KPAVGSSDKVETNVNETSKLKLKEVKAISHPKERTRQEKAKPEEGETNLKRKRPKRNKDP 908

Query: 132  GGDEGVDKLDVLVEQYRSKFSQHIVYKTAGEKQGSRQLKRWF 7
             G + VDKLD+L+EQYRSKFSQ        EKQGS++L+RWF
Sbjct: 909  SGRDVVDKLDMLIEQYRSKFSQPKSGTPDAEKQGSKKLRRWF 950


>gb|KHG15251.1| RNA-binding 28 [Gossypium arboreum]
          Length = 956

 Score =  714 bits (1844), Expect = 0.0
 Identities = 416/841 (49%), Positives = 539/841 (64%), Gaps = 41/841 (4%)
 Frame = -3

Query: 2433 HSPSKIRVSNLPDSFTDDQLMKTFSDFGPPVKRCFMVMEKGSNFHRGVGFVQFVKTEDAK 2254
            HSP+ + V+NLP SFT+ QL +TFSD GP ++RCFMV +KGS  HRG+ FVQF   EDA 
Sbjct: 15   HSPATVFVTNLPYSFTNSQLEETFSDVGP-IRRCFMVTKKGSTEHRGIAFVQFAVAEDAN 73

Query: 2253 LATELKNGAFVGGKKIAVELAKCRANLKQRRLKTNKVNA-----DDQGTA---------- 2119
             A ELKNG+ VGG+KI V+ A  RA+L+QR  K  + +A     D+ G            
Sbjct: 74   RAIELKNGSSVGGRKIGVKHAMHRASLEQRLSKATQDDATKTKNDNNGLLTSAVEAHGSD 133

Query: 2118 -----------KALVPLDIVATKGKPSEKQRVARTVIFGGLTNADVAEEVICRAKEVEKV 1972
                       KA      +A K   SEKQRVARTVIFGGL NA++AE+V  RAKE+   
Sbjct: 134  LPKLAKPVQPKKAATLCSDLADKENCSEKQRVARTVIFGGLRNAEMAEDVHRRAKEIG-- 191

Query: 1971 ENVGSVMYPLPKQKLEQHALARDGCKMDAAAVLYTSVKSARVAVSKLHQQEIKGASVWAR 1792
              V +V YPLPK++LE+H LA+DGCKMDA+AVL+TSVK A  AV+ LHQ+EI G+ VWAR
Sbjct: 192  -TVCAVTYPLPKEELEEHGLAQDGCKMDASAVLFTSVKLAHTAVAMLHQKEIHGSIVWAR 250

Query: 1791 QLGGEGSKTEKWKLIVRNIPFEAKCNEIKELFSSAGFVWNVSIPQAPDTGLSKGFAFITF 1612
            QLGGEGSKT+KWKLI+RN+ F+AK +EIK++FS+AGFVW+V IP   +TGLSKGFAF+ F
Sbjct: 251  QLGGEGSKTQKWKLIIRNLSFKAKLSEIKDMFSAAGFVWDVFIPHNSETGLSKGFAFVKF 310

Query: 1611 TCKQDAENAIRKVNGQNFGDRPIAVDWAVPKKIYITGAN-AVDSYKNGLQHREEEDETSN 1435
            T KQDAENAI+K NG+    RPIAVDWAVPKK+Y  G N AV S    L  ++EE + S+
Sbjct: 311  TSKQDAENAIQKFNGKTLCKRPIAVDWAVPKKLYGAGGNTAVTSDDGQLNKKDEESDGSS 370

Query: 1434 DNIEDVIGGRDRKSQQPQAGDTATENSDVTLNYGPAEVVDFEKEYDIASKVCTNMITSEG 1255
             ++ED  G  D           A+ +S+ +     +  VDF+KE DIA KV  N++ S  
Sbjct: 371  IDMEDEGGDSDNDIDD----GIASNDSNKSEMERTSTAVDFDKEVDIARKVLNNLVMSSS 426

Query: 1254 KGNLDSIGEDSALPPSKELTTTMEKAAVR-------------VKPKWPGMTEHTEHAKME 1114
            K +  S+ ++  LP S++ T   E   V+             +KP+  G  +  +    E
Sbjct: 427  KDS-PSLQDNGVLPKSEDNTNVDETINVQNKLPVESAIGSDVIKPEKSGTNKQID--SEE 483

Query: 1113 EQQRTVFIINLPFDTSSEDVKQRFSEFGDVQSFLPVLHKVTRRPTGTGFLKFSTXXXXXX 934
            E QRTVFI NLPFD  +++VK+RFS FG+VQSF+PVLH VT+RP GTGFLKF T      
Sbjct: 484  ELQRTVFISNLPFDIDNKEVKERFSGFGEVQSFIPVLHPVTKRPRGTGFLKFKTIDAATA 543

Query: 933  XXXXXXATGDSEILLKGRQLTVFKAQDKKSAHDSKLDKAKSEHVDQRNLYLAKEGIILEG 754
                  A+    I LKGRQ+ V KA D+KSAHD +L+KAK+E  D RNLYLAKEG+I+EG
Sbjct: 544  AVSAANASSGLGIFLKGRQIKVLKALDRKSAHDKELEKAKAEEHDLRNLYLAKEGLIVEG 603

Query: 753  SPAAEGVSSYDMSKRHVLEKTKNIKLQSPNFHVSRTRLIVYNLPNAISQKQLKKIFVDAV 574
            + AA+ VS+ DM KR +L + K  KLQSPNFHVS+TRL++YNLP ++++ +LK++ +DAV
Sbjct: 604  TSAAKDVSASDMEKRQMLHEKKMTKLQSPNFHVSKTRLVIYNLPKSMTENELKQLCIDAV 663

Query: 573  LSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAFIQFTEHQHALVALRVLNNNPETFG 397
             SRA+KQ PVI+QIKFL   K  K   KN SR VAF++FTEHQHALVALRVLNNNPETFG
Sbjct: 664  TSRATKQKPVIRQIKFLKTVKKGKIVVKNQSRGVAFVEFTEHQHALVALRVLNNNPETFG 723

Query: 396  PERRPIIEFALDNIQTLKLRQRKLAYWSTEKPNKKVSSRLNSKSADAPELKSEDAEMVQK 217
             E RPI+EFA+DN+QTLKLR+ KL     +   +  S  LN            DA    K
Sbjct: 724  SEHRPIVEFAVDNVQTLKLRKAKL-----QAQQQDASDNLN------------DALQNAK 766

Query: 216  KRKFQGKINLEQPRKGKFPNKTKKRSKTGGDEGVDKLDVLVEQYRSKFSQHIVYKTAGEK 37
               F    N  + RK +   +  K S+    E    ++ +V     + S+   +K  GEK
Sbjct: 767  AHPFDDHTNKSRKRKSRDDQRATKHSELKKAE----MENVVATEEGQASKKPKHKPTGEK 822

Query: 36   Q 34
            +
Sbjct: 823  R 823