BLASTX nr result

ID: Papaver31_contig00000314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00000314
         (1877 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010108722.1| F-box/kelch-repeat protein [Morus notabilis]...    61   3e-06
ref|XP_004289627.1| PREDICTED: F-box/kelch-repeat protein At3g06...    60   9e-06

>ref|XP_010108722.1| F-box/kelch-repeat protein [Morus notabilis]
            gi|587933032|gb|EXC20033.1| F-box/kelch-repeat protein
            [Morus notabilis]
          Length = 402

 Score = 61.2 bits (147), Expect = 3e-06
 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 2/199 (1%)
 Frame = -2

Query: 1195 VVRRVLLVMPVSFSNLSELVGYCNGLPCMAQVGNYSTAYMILDPNRNDYLFIFYPSMVGI 1016
            VV+ + L   +     S +  +CNG+ C      +     + +P+ N++  +  PS++  
Sbjct: 109  VVQEINLPPTLKHDTDSFINSHCNGIICWFNRSGFCGEIFLCNPSLNEFKLLHTPSLLPE 168

Query: 1015 RTPNAHIICHGFGFDPSANEYKLVSIYGTAEKEL--NVVVFTLGTKSWRNITATSMPMSA 842
              P+      GFG+D  AN+YK V ++ +A   +    +V+TLG  SW+ I    M +  
Sbjct: 169  FWPSGF----GFGYDARANDYKFVKLFRSAYNPIASRALVYTLGIDSWKEI---KMDLKG 221

Query: 841  HGCSPITKIRAPTGSDRSAIFCTTSRSSSGCLVWKIIATSGGEGSNHIQQDNCNAVNNEM 662
              C           +D   ++C       G   W   A  G E                 
Sbjct: 222  KFCL----------ADAKGVYC------RGVYYWVNKAVPGRE----------------- 248

Query: 661  EMLLSFNLHDEKFQFIQLP 605
            +M+LSF++ DE F  I LP
Sbjct: 249  DMILSFDMSDEVFHTIALP 267


>ref|XP_004289627.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria vesca
            subsp. vesca] gi|764523188|ref|XP_011457692.1| PREDICTED:
            F-box/kelch-repeat protein At3g06240-like [Fragaria vesca
            subsp. vesca]
          Length = 387

 Score = 59.7 bits (143), Expect = 9e-06
 Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 5/208 (2%)
 Frame = -2

Query: 1228 SSVF*MSGMGFVVRRVLLVMPVSFSNLSELVGYCNGLPCMAQVGNY--STAYMILDPNRN 1055
            SS F ++ + F VR+      ++     ELVG CNGL C+    N   S A M+ +P   
Sbjct: 137  SSQFAVTRLDFPVRKT-----INDFGCRELVGACNGLVCVKYPCNDGDSKAIMLWNPCTR 191

Query: 1054 DYLFIFYPSMVGIRTPNAHIICHGFGFDPSANEYKLV---SIYGTAEKELNVVVFTLGTK 884
            DY  +  P +V   T + ++  +GFG+DP+ ++YK++   +      KE+ + +F+L T 
Sbjct: 192  DYKVLPKPPLVIHSTFSNYV--YGFGYDPANDDYKVIWGLTCDSNDAKEIMIHIFSLKTG 249

Query: 883  SWRNITATSMPMSAHGCSPITKIRAPTGSDRSAIFCTTSRSSSGCLVWKIIATSGGEGSN 704
            SWR I  T                     D   +        +G L W     +GG G  
Sbjct: 250  SWRTIKDT---------------------DYVRVITCEGLFLNGALHWLYCPPNGGSG-- 286

Query: 703  HIQQDNCNAVNNEMEMLLSFNLHDEKFQ 620
                            +LSF+L  EKFQ
Sbjct: 287  ----------------ILSFDLGVEKFQ 298


Top