BLASTX nr result
ID: Papaver31_contig00000068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00000068
(2543 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1189 0.0
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 1170 0.0
ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1162 0.0
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 1153 0.0
ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 1152 0.0
ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polyme... 1150 0.0
ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1144 0.0
ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1143 0.0
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 1142 0.0
ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1141 0.0
ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [P... 1137 0.0
emb|CBI21038.3| unnamed protein product [Vitis vinifera] 1129 0.0
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 1129 0.0
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun... 1129 0.0
emb|CDP13507.1| unnamed protein product [Coffea canephora] 1125 0.0
ref|XP_004291459.2| PREDICTED: RNA-dependent RNA polymerase 6 is... 1125 0.0
ref|XP_010250107.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1125 0.0
ref|XP_011459183.1| PREDICTED: RNA-dependent RNA polymerase 6 is... 1125 0.0
ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [N... 1124 0.0
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 1121 0.0
>ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
gi|719995135|ref|XP_010254391.1| PREDICTED: RNA-dependent
RNA polymerase 6-like [Nelumbo nucifera]
gi|719995138|ref|XP_010254392.1| PREDICTED: RNA-dependent
RNA polymerase 6-like [Nelumbo nucifera]
gi|719995142|ref|XP_010254393.1| PREDICTED: RNA-dependent
RNA polymerase 6-like [Nelumbo nucifera]
Length = 1193
Score = 1189 bits (3077), Expect = 0.0
Identities = 569/807 (70%), Positives = 667/807 (82%)
Frame = -2
Query: 2527 LLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFM 2348
LL NPK+IK KG D E+R+L+ITPTKAYCLPPEVELSNR+LRKY+ A+RFLRV+F
Sbjct: 392 LLDNPKLIKISKGSDDFVEMRKLVITPTKAYCLPPEVELSNRVLRKYKHVANRFLRVSFK 451
Query: 2347 DEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSS 2168
DE QQL+SN L YYVAPIVRD+T N FPQKT VFNRVKTIL +GF+LCGRKYSFLAFSS
Sbjct: 452 DERMQQLSSNALNYYVAPIVRDITSNPFPQKTTVFNRVKTILSNGFFLCGRKYSFLAFSS 511
Query: 2167 NQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVN 1988
NQLRDRSAWFFAE NIKV ++K WMG+FT++NVAKC ARMG+CFSST+ATVEVP ++VN
Sbjct: 512 NQLRDRSAWFFAEDKNIKVIEVKKWMGRFTNRNVAKCAARMGLCFSSTYATVEVPLKEVN 571
Query: 1987 GNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKT 1808
LPDIERNGYVFSDGIG +TPDL+ EVA KLQLT+NPPCAYQIR+AGCKGV+ CWP K
Sbjct: 572 LELPDIERNGYVFSDGIGMLTPDLSMEVAEKLQLTANPPCAYQIRYAGCKGVIVCWPGKE 631
Query: 1807 DEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMV 1628
D RLS+RPSM KF+S+HT+LE+ SWTRFQP +LNRQII LLSAL VPD VFS MQ +MV
Sbjct: 632 DGIRLSLRPSMNKFESRHTILEVCSWTRFQPSYLNRQIITLLSALCVPDDVFSRMQDSMV 691
Query: 1627 HKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLL 1448
KL ++ENTD+AFDVVTSSCAEQGNTA +ML AGFKPQ EPHL+GML+ IRA Q RDLL
Sbjct: 692 SKLNQMIENTDVAFDVVTSSCAEQGNTAAIMLSAGFKPQMEPHLKGMLSCIRAAQLRDLL 751
Query: 1447 EKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKG 1268
EK+RIFVP GRWLMGC DEL VLE+GQCFIQ S PSLENCFS G FS K QV+KG
Sbjct: 752 EKSRIFVPSGRWLMGCLDELAVLEEGQCFIQVSKPSLENCFSKHGSRFSEVKKNTQVVKG 811
Query: 1267 TVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVT 1088
V +AKNPCLHPGDIRILEA+D P LHHL+DCLVFPQKGDRPH NEASGSDLDGDLYFVT
Sbjct: 812 IVAIAKNPCLHPGDIRILEAIDVPSLHHLIDCLVFPQKGDRPHTNEASGSDLDGDLYFVT 871
Query: 1087 WDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVHAD 908
WDE+L+PPSK+S +PMDYSP E++KL R +N D++DFF+K+MVNEKLG ICN+HVVHAD
Sbjct: 872 WDEHLIPPSKQSLVPMDYSPAEVKKLPRDVNHRDLIDFFMKSMVNEKLGVICNAHVVHAD 931
Query: 907 LSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVL 728
LS+YGA+DEKCI+LAELAATAVDFPKTGKVV +PQELKPK YPDFMGKE+F SYKS K+L
Sbjct: 932 LSEYGALDEKCIQLAELAATAVDFPKTGKVVTVPQELKPKRYPDFMGKEEFQSYKSNKIL 991
Query: 727 GELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDGQL 548
G+LYRKIKD D V +S+ F +DIPYD LE+ GS+D + +AW+ KCL+D QL
Sbjct: 992 GKLYRKIKDFSDEDVEESE----ITFAAEDIPYDVHLEVLGSSDHLADAWNLKCLHDAQL 1047
Query: 547 NALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGEDS 368
LL Q+ V EEEVVTGH+WSMPKYN+ AYN++K+EF++ F+ + E
Sbjct: 1048 TTLLGQYKVNREEEVVTGHIWSMPKYNSNKQGELKERLKNAYNALKKEFRQAFEKIDETL 1107
Query: 367 QNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLVRI 188
Q LT+ EKNTIYEQKASAWYQVTYHPRW+ K+++LR +D+ MLSFAW+PA+YLVRI
Sbjct: 1108 Q-LTDDEKNTIYEQKASAWYQVTYHPRWIMKTLKLREHEDESNPAMLSFAWIPADYLVRI 1166
Query: 187 KIRRRDVRHLDMEKPINSLAGYLVGKI 107
KI+ RD+ ++D KPIN+LA YL +I
Sbjct: 1167 KIKHRDMENVDARKPINALANYLADRI 1193
>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1200
Score = 1170 bits (3026), Expect = 0.0
Identities = 560/811 (69%), Positives = 658/811 (81%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
VQ LLKNP + K+ K LGD E+RRL+ITPTKAYCLPPEVELSNR+LRKY++ ADRFLR
Sbjct: 393 VQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLR 452
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
VTFMDEG Q++NSNVL YYVAPIVRD+T NSFPQKT +F RV++IL +GFYLCGR+YSFL
Sbjct: 453 VTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFPQKTRIFKRVRSILTEGFYLCGRRYSFL 512
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFS+NQLRD+SAWFF+E NI V D+KSWMGKFT++N+AKC ARMG CFSST+AT+EVP
Sbjct: 513 AFSANQLRDQSAWFFSEERNISVLDVKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPP 572
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
E+VN +LPDIERNGYVFSDGIG ITPDLA+EVA KL+L +PPCAYQIR+AGCKGVVACW
Sbjct: 573 EEVNSDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACW 632
Query: 1819 PEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQ 1640
P K D RLS+RPSM KFQS HT LEI SWTRFQPGFLNRQII LLS L VPD VF MQ
Sbjct: 633 PGKGDGVRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQ 692
Query: 1639 ATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQF 1460
TMV KL + N+D+AFDV+T+SCA+QGN A +ML AGFKP EPHLRGMLT +RA Q
Sbjct: 693 ETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAIMLSAGFKPDREPHLRGMLTCVRAAQL 752
Query: 1459 RDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQ 1280
DL EKTRIFVP GRWLMGC DELG+LEQGQCFIQ S SLE CF G FS + LQ
Sbjct: 753 WDLREKTRIFVPSGRWLMGCLDELGMLEQGQCFIQVSNSSLEKCFMKHGAKFSEAEKNLQ 812
Query: 1279 VIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 1100
VIKGTVV+AKNPCLHPGD+R+LEAVD PGLHHL DCLVFPQKG+RPH NEASGSDLDGDL
Sbjct: 813 VIKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDL 872
Query: 1099 YFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHV 920
YFVTWDENL+PPSKRSWIPM Y E + L R +N DI++FF KNMVN+ LG ICN+HV
Sbjct: 873 YFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPVNHQDIIEFFAKNMVNDNLGAICNAHV 932
Query: 919 VHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKS 740
VHADLS+YGA D+ C+ LAELAATAVDFPKTGKVV+MP LKPKMYPDFMGKE++ SYKS
Sbjct: 933 VHADLSEYGATDKNCLTLAELAATAVDFPKTGKVVSMPPYLKPKMYPDFMGKEEYQSYKS 992
Query: 739 KKVLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLY 560
+K+LG LYR+IKD+ D V S + L DIPYD+DLE+ G++D+I +AWD+KC Y
Sbjct: 993 EKILGRLYRQIKDAYDEDVAASSELNLV---PGDIPYDSDLEVVGASDYISDAWDQKCSY 1049
Query: 559 DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 380
DGQLN LL Q+ VK EEEVVTGH+WSMPKY++R +YNS+K+EF+++F+ +
Sbjct: 1050 DGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKM 1109
Query: 379 GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEY 200
+ + L + EKN +YEQKASAWYQV YHP WVKKS+EL++ D + MLSFAW+ A+Y
Sbjct: 1110 DLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQDPDGAGTSVMLSFAWIAADY 1169
Query: 199 LVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
L RIKIR R+ ++D KP+NSLA YL ++
Sbjct: 1170 LARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200
>ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1200
Score = 1162 bits (3007), Expect = 0.0
Identities = 558/815 (68%), Positives = 657/815 (80%), Gaps = 4/815 (0%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
VQ LLKNP + K+ K LGD E+RRL+ITPTKAYCLPPEVELSNR+LRKY++ ADRFLR
Sbjct: 393 VQEWLLKNPNLFKNPKQLGDIVEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLR 452
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
VTFMDEG Q++NSNVL YYVAPIVRD+T NSF QKT +F RV++IL +GFYLCGR+YSFL
Sbjct: 453 VTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFHQKTRIFKRVRSILTEGFYLCGRRYSFL 512
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFS+NQLRD+SAWFFAE N+ V DIKSWMGKFT++N+AKC ARMG CFSST+AT+EVP
Sbjct: 513 AFSANQLRDQSAWFFAEERNVSVLDIKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPP 572
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
E+VN +LPDIERNGYVFSDGIG ITPDLA+EVA KL+L +PPCAYQIR+AGCKGVVACW
Sbjct: 573 EEVNFDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACW 632
Query: 1819 PEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQ 1640
P K D LS+RPSM KFQS HT LEI SWTRFQPGFLNRQII LLS L VPD VF MQ
Sbjct: 633 PGKGDGVHLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQ 692
Query: 1639 ATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQF 1460
TMV KL + N+D+AFDV+T+SCA+QGN A +ML AGFKPQ EPHLRGMLT +RA Q
Sbjct: 693 ETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQL 752
Query: 1459 RDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQ 1280
L EK RIFVP GRWLMGC DELG+LEQGQCFIQ S SLE CF G FS K LQ
Sbjct: 753 WGLREKARIFVPSGRWLMGCLDELGMLEQGQCFIQVSNSSLEKCFIKHGAKFSEAKKNLQ 812
Query: 1279 VIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 1100
V+KGTVV+AKNPCLHPGD+R+LEAVD PGLHHL DCLVFPQKG+RPH NEASGSDLDGDL
Sbjct: 813 VVKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDL 872
Query: 1099 YFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHV 920
YFVTWDENL+PPSKRSWIPM Y E + L R +N DI++FF KNMVNE LG ICN+HV
Sbjct: 873 YFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPVNHQDIIEFFAKNMVNENLGAICNAHV 932
Query: 919 VHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKS 740
VHADLS++GAMDEKC+ LAELAATAVDFPKTGKVV MP LKPK+YPDFMGKE++ SYKS
Sbjct: 933 VHADLSEHGAMDEKCLTLAELAATAVDFPKTGKVVTMPSYLKPKVYPDFMGKEEYQSYKS 992
Query: 739 KKVLGELYRKIKDSPDLVVGDSDKDTLAVFQVD----DIPYDTDLEIPGSADFIREAWDR 572
+K+LG LYR+IKD+ D+D A +++ DIPYD+DLE+ G++D+I +AWD+
Sbjct: 993 EKILGRLYRQIKDA-------YDEDVAASSELNPVPGDIPYDSDLEVVGASDYINDAWDQ 1045
Query: 571 KCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRV 392
KC YDGQLN LL Q+ VK EEE+VTGH+WSMPKY++R +YNS+K+EF+++
Sbjct: 1046 KCSYDGQLNGLLSQYKVKREEELVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEFRQI 1105
Query: 391 FDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWV 212
F+ + + + L + EKN +YEQKASAWYQV YHP WVKKS+EL++ D + MLSF W+
Sbjct: 1106 FEKMDLEFEQLEDGEKNKLYEQKASAWYQVAYHPHWVKKSLELQDPDGAGTSVMLSFGWI 1165
Query: 211 PAEYLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
A+YL RIKIR R+ ++D KP+NSLA YL +I
Sbjct: 1166 AADYLARIKIRHRETGNVDSAKPVNSLAKYLADRI 1200
>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1198
Score = 1153 bits (2983), Expect = 0.0
Identities = 561/811 (69%), Positives = 649/811 (80%), Gaps = 4/811 (0%)
Frame = -2
Query: 2527 LLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFM 2348
LLKNPK K+ K L D AE+RRL+ITPTKAYCLPPEVELSNR+LRKY++ ADRFLRVTFM
Sbjct: 394 LLKNPKFFKNQKKLDDIAEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFM 453
Query: 2347 DEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSS 2168
DEG Q +NSN L Y+ APIVR +T SFPQKT +F RV++IL +GFYLCGR+YSFLAFSS
Sbjct: 454 DEGLQTMNSNALNYFAAPIVRAITSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSS 513
Query: 2167 NQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVN 1988
NQLRDRSAWFFAE NI V IKSWMGKFT+KN+AKC ARMG CFSST+AT+EVP E+VN
Sbjct: 514 NQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVN 573
Query: 1987 GNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKT 1808
+LPDI+RNGY FSDGIG ITPDLA+EVA KL+ +PPCAYQIR+AGCKGVVACWPE+
Sbjct: 574 SDLPDIKRNGYDFSDGIGMITPDLAREVAEKLKFDFDPPCAYQIRYAGCKGVVACWPEQG 633
Query: 1807 DEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMV 1628
D RLS+R SM KFQS HT+LEI SWTRFQPGFLNRQII LLSAL VPD VF MQ MV
Sbjct: 634 DGIRLSLRSSMNKFQSNHTILEICSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQELMV 693
Query: 1627 HKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLL 1448
KL +L ++D+AFDV+T+SCAEQGN A +ML AGFKPQ EPHLRGMLT +RA Q L
Sbjct: 694 SKLNQMLVDSDVAFDVLTASCAEQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLR 753
Query: 1447 EKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKG 1268
EK RIFVP GRWLMGC DELGVLEQGQCFIQ S LENCF G FS K LQV+KG
Sbjct: 754 EKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKG 813
Query: 1267 TVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVT 1088
TVV+AKNPCLHPGDIRILEAVD PGLHHL DCLVFPQKG+RPHANEASGSDLDGDLYFVT
Sbjct: 814 TVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVT 873
Query: 1087 WDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVHAD 908
WDENL+PPSKRSWIPM Y E ++L R +N DIV+FF KNM NE LG ICN+HVV AD
Sbjct: 874 WDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQDIVEFFAKNMANENLGAICNAHVVRAD 933
Query: 907 LSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVL 728
LS+YGA+DEKC+ LAELAATAVDFPKTGK+V+MP +LKPK+YPDFMGKE+ SYKSKK+L
Sbjct: 934 LSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKIL 993
Query: 727 GELYRKIKDSPDLVVGDSDKDTLAVFQVD----DIPYDTDLEIPGSADFIREAWDRKCLY 560
G LYR+IKD+ D D D A +++ DIPYD DLE+ G+ DFI +AWDRKC Y
Sbjct: 994 GRLYRQIKDAYD------DDDVAASSELNFVRGDIPYDLDLEVLGATDFISDAWDRKCSY 1047
Query: 559 DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 380
DGQLN LL Q+ VK EEEVVTGHVWSMPK ++R +YN +KREF++VF+ +
Sbjct: 1048 DGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDLKERLKHSYNCLKREFRQVFEKM 1107
Query: 379 GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEY 200
D L + EKN +YE+KASAWYQVTYHP W++KS+EL++SD + MLSFAW+ A+Y
Sbjct: 1108 DLDFGQLDDDEKNMLYERKASAWYQVTYHPHWIQKSLELQDSDGAGISVMLSFAWIAADY 1167
Query: 199 LVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
L RIKIR + ++D KP+NSLA YL ++
Sbjct: 1168 LARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198
>ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
SHL2 [Phoenix dactylifera]
Length = 1198
Score = 1152 bits (2979), Expect = 0.0
Identities = 555/811 (68%), Positives = 657/811 (81%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
VQ LLKNPK +KS K DS+EVRRL+ITPTKAYCLPP VELSNR+LR Y+E ADRFLR
Sbjct: 393 VQDWLLKNPKFLKSSKLSDDSSEVRRLVITPTKAYCLPPGVELSNRVLRNYKEVADRFLR 452
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
VTFMDEG Q+LN+NVL YYVAPIV+++T NSFPQKT VF RV++IL DGF+LCGR+YSFL
Sbjct: 453 VTFMDEGMQKLNNNVLNYYVAPIVKELTSNSFPQKTTVFRRVRSILIDGFHLCGRRYSFL 512
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFSSNQLRDRSAWFFAE +N V DI+ WMGKF +KNVAKC ARMG CFSST+ATV+VP
Sbjct: 513 AFSSNQLRDRSAWFFAEDSNTSVEDIRDWMGKFANKNVAKCAARMGQCFSSTYATVDVPP 572
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
+QVN LPDIER GY+FSDGIGKITP+LA EVA KLQLT NPP AYQIR+AG KGVVA W
Sbjct: 573 DQVNPLLPDIERKGYIFSDGIGKITPELAMEVAEKLQLTENPPSAYQIRYAGTKGVVAVW 632
Query: 1819 PEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQ 1640
P D RLS+RPSM KF+S HT+LE+VSWTRFQPGFLNRQI+ LLS+L VPD+VF+ MQ
Sbjct: 633 PGDDDGIRLSLRPSMNKFESSHTMLEVVSWTRFQPGFLNRQIVTLLSSLNVPDSVFASMQ 692
Query: 1639 ATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQF 1460
+M++KL +L +TD+AFDV+TSSCAEQGNTA +ML AGFKPQTEPHL+ ML+ IR+ Q
Sbjct: 693 DSMIYKLNQMLVDTDVAFDVLTSSCAEQGNTAAIMLSAGFKPQTEPHLKAMLSCIRSAQL 752
Query: 1459 RDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQ 1280
DLL K R FVP+GRWLMGC DELGVLE GQCFIQSSIPSLENCF G FSG K Q
Sbjct: 753 GDLLAKARXFVPKGRWLMGCLDELGVLEHGQCFIQSSIPSLENCFMKHGSRFSGIKKNRQ 812
Query: 1279 VIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 1100
VI GTV +AKNPCLHPGDIRILEAVD P LHHLVDCLVFPQKGDRPHANEASGSDLDGDL
Sbjct: 813 VIVGTVAIAKNPCLHPGDIRILEAVDVPSLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 872
Query: 1099 YFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHV 920
YFVTWDENL+PP K+SWIPMDY+P + + R + DI+DFF+KNMVNE LG ICN+HV
Sbjct: 873 YFVTWDENLIPPGKKSWIPMDYTPAKPKLEPRGVTPRDIIDFFLKNMVNENLGVICNAHV 932
Query: 919 VHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKS 740
VHAD S+YGA+DEKC++LAELAATAVDFPKTGK+V MP LKPK+YPDFMGK+D +SY+S
Sbjct: 933 VHADCSEYGALDEKCLQLAELAATAVDFPKTGKLVMMPPALKPKVYPDFMGKDDHMSYQS 992
Query: 739 KKVLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLY 560
+KVLG LYR IKD+ D+D + + +++PYD DL+IPG++D++ +AW ++C Y
Sbjct: 993 QKVLGILYRNIKDAT-----DNDVSSELLCTAEELPYDADLDIPGASDYLADAWXKQCSY 1047
Query: 559 DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 380
DGQLNALL Q+ V+SE EVVTGH+WS+PKYN+R AY+++ +EF+R+F+N+
Sbjct: 1048 DGQLNALLAQYRVRSEGEVVTGHIWSLPKYNSRKQGELKERLRNAYSALHKEFRRIFENM 1107
Query: 379 GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEY 200
G D Q LT+ EK YEQKASAWYQVTY PRW+KK E+ +D LSFAW+ A+Y
Sbjct: 1108 GPDFQQLTDDEKCLSYEQKASAWYQVTYQPRWIKKLSEIEEADGDAVPARLSFAWIAADY 1167
Query: 199 LVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
LVRIKIR D D ++PI++LA YL +I
Sbjct: 1168 LVRIKIRSGDRGRFDNKRPIDTLACYLSERI 1198
>ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
guineensis]
Length = 1198
Score = 1150 bits (2974), Expect = 0.0
Identities = 557/811 (68%), Positives = 654/811 (80%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
VQ LLKNPK++KS K L DS EVRRL+ITPTKAYCLPPEVELSNR+LR Y++ ADRFLR
Sbjct: 393 VQDWLLKNPKLLKSSKLLDDSTEVRRLVITPTKAYCLPPEVELSNRVLRNYKKVADRFLR 452
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
VTFMDEG Q LN+NVL YYVAPIV+++T NSFPQKT VF RV+ IL DGF+LCGR+YSFL
Sbjct: 453 VTFMDEGMQPLNNNVLNYYVAPIVKELTSNSFPQKTTVFRRVRNILLDGFHLCGRRYSFL 512
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFSSNQLRDRSAWFFAE +N V I++WMGKF +KNVAKC ARMG CFSST+ATV+VP
Sbjct: 513 AFSSNQLRDRSAWFFAEDSNTSVMAIRNWMGKFANKNVAKCAARMGQCFSSTYATVDVPL 572
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
+Q N LPDIERNGYVFSDGIGKI P+LA EVA KLQLT NPP AYQIR+AG KGVVA W
Sbjct: 573 DQFNPLLPDIERNGYVFSDGIGKIIPELAIEVAEKLQLTENPPSAYQIRYAGFKGVVAVW 632
Query: 1819 PEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQ 1640
P D RLS+RPSM KF+S HT+LE+VSWTRFQPGFLNRQI+ LLS+L V D+VF MQ
Sbjct: 633 PADDDGVRLSLRPSMNKFESSHTMLEVVSWTRFQPGFLNRQIVTLLSSLNVADSVFESMQ 692
Query: 1639 ATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQF 1460
+M++KL +L +TD+AFDV+TSSCAEQGNTA +ML AGFKPQ EPHL+ ML+ IR+ Q
Sbjct: 693 DSMIYKLNQMLVDTDVAFDVLTSSCAEQGNTAAIMLSAGFKPQMEPHLKAMLSCIRSAQL 752
Query: 1459 RDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQ 1280
DLL K RIFVP+GRWLMGC DELGVLE GQCFIQSSIPSLENCF G FS K Q
Sbjct: 753 GDLLAKARIFVPKGRWLMGCLDELGVLEHGQCFIQSSIPSLENCFMKHGSRFSLLKKNRQ 812
Query: 1279 VIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 1100
VI GTV +AKNPCLHPGDIRILEAVD P LHHLVDCLVFPQKGDRPHANEASGSDLDGDL
Sbjct: 813 VIVGTVAIAKNPCLHPGDIRILEAVDVPSLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 872
Query: 1099 YFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHV 920
YFVTWDENL+PPSK+SWIPMDY+P E + RA+ DI+DFF+KNMVNE LG ICN+HV
Sbjct: 873 YFVTWDENLIPPSKKSWIPMDYTPAEPKLQPRAVTPRDIIDFFLKNMVNENLGVICNAHV 932
Query: 919 VHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKS 740
VHAD S+YGA+DE C++LAELAATAVDFPKTGK+V MP LKPK+YPDFMGK+D +SYKS
Sbjct: 933 VHADRSEYGALDENCLQLAELAATAVDFPKTGKLVTMPSGLKPKVYPDFMGKDDHMSYKS 992
Query: 739 KKVLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLY 560
+KVLG LYR IK D+D T +++PYDTDL+IPG++ ++ +AW KC Y
Sbjct: 993 QKVLGRLYRNIK-----YAADNDVSTELPCTAEELPYDTDLDIPGASYYLADAWQNKCSY 1047
Query: 559 DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 380
DGQLNALL Q+ V+SE EVVTGH+WS+PKYN+R AY+++ +EF+R+F+++
Sbjct: 1048 DGQLNALLAQYRVRSEGEVVTGHIWSLPKYNSRKQGELKERLKNAYSALHKEFRRIFEDM 1107
Query: 379 GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEY 200
G D Q LT+ EK+ YEQ+ASAWYQVTYHPRW+K+S E++ D V LSFAWV A+Y
Sbjct: 1108 GPDFQQLTDDEKSVSYEQRASAWYQVTYHPRWIKRSGEIKEPDGDVVPARLSFAWVAADY 1167
Query: 199 LVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
LVRIKI +D + D +PI++LA YL +I
Sbjct: 1168 LVRIKISSQDRQKFDNSRPIDTLACYLSERI 1198
>ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
gi|643731347|gb|KDP38635.1| hypothetical protein
JCGZ_03988 [Jatropha curcas]
Length = 1198
Score = 1144 bits (2958), Expect = 0.0
Identities = 557/813 (68%), Positives = 637/813 (78%), Gaps = 2/813 (0%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
VQ LLKNPK+ K K L D ++RRL ITPT+AYCLPPE+ELSNR+LRKY+ FADRFLR
Sbjct: 390 VQEWLLKNPKLFKCPKQLDDIVQIRRLAITPTRAYCLPPEIELSNRVLRKYKNFADRFLR 449
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
VTFMDEG Q +N+N LTYYVAPIVRD+T SF QKT +F RVK+IL DGFYLCGR+YSFL
Sbjct: 450 VTFMDEGLQTINANTLTYYVAPIVRDITSTSFSQKTRIFKRVKSILTDGFYLCGRRYSFL 509
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFSSNQLRDRSAWFFAE I+V I+ WMGKFT+KN+AKC ARMG CFSST+ATVEVP
Sbjct: 510 AFSSNQLRDRSAWFFAEDGKIRVDQIRKWMGKFTNKNIAKCAARMGQCFSSTYATVEVPS 569
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
+VN PDIERNGY FSDGIG ITPDLAK VA KL+L NPPCAYQIR+AGCKGVVACW
Sbjct: 570 AEVNLAHPDIERNGYTFSDGIGMITPDLAKAVAEKLKLDINPPCAYQIRYAGCKGVVACW 629
Query: 1819 PEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQ 1640
P + D RLS+RPSM KFQS HT LEI SWTRFQPGFLNRQII LLS L V D +F MQ
Sbjct: 630 PAQGDGIRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNVSDEIFWKMQ 689
Query: 1639 ATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQF 1460
MV KL +L + D+AFDV+T+SC EQGNTA +ML AGFKPQ EPHLRGMLT IRA QF
Sbjct: 690 IAMVSKLNKMLTDADVAFDVITASCTEQGNTAALMLSAGFKPQNEPHLRGMLTCIRAAQF 749
Query: 1459 RDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQ 1280
DL EK RIFV GRWLMGC DELGVLEQGQCFIQ S PSLE CFS G FS K LQ
Sbjct: 750 CDLREKARIFVSSGRWLMGCLDELGVLEQGQCFIQVSNPSLETCFSKHGSRFSETKKNLQ 809
Query: 1279 VIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 1100
VI GTVV+AKNPCLHPGD+RILEAVD PGL HL DCLVFPQKGDRPH NEASGSDLDGDL
Sbjct: 810 VITGTVVIAKNPCLHPGDVRILEAVDAPGLCHLHDCLVFPQKGDRPHTNEASGSDLDGDL 869
Query: 1099 YFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHV 920
YFVTWDENL+PPSK+SW PM Y E + L R ++ DI+DFF KNMVNE LG ICN+HV
Sbjct: 870 YFVTWDENLIPPSKQSWTPMQYDAAEPKLLSRPVSHQDIIDFFAKNMVNESLGAICNAHV 929
Query: 919 VHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKS 740
V ADLS+YGA+DE CIKLAELAATAVDFPKTGK+V +PQ LKPKMYPDFMGKE++ SYKS
Sbjct: 930 VRADLSEYGALDENCIKLAELAATAVDFPKTGKLVTLPQYLKPKMYPDFMGKEEYQSYKS 989
Query: 739 KKVLGELYRKIKDSPDLVVGDSDKDTLAVFQVD--DIPYDTDLEIPGSADFIREAWDRKC 566
K+LG LYR IKD+ GD D + DIPYDT+LE+ GSAD+I EAWD+KC
Sbjct: 990 TKILGRLYRDIKDA----YGDDDAAASSELNCSSGDIPYDTNLEVLGSADYILEAWDQKC 1045
Query: 565 LYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFD 386
YDGQL LL Q+ VK EEE+VTGH+WSMP YN+R +Y+++K+EF++VF+
Sbjct: 1046 SYDGQLKGLLGQYKVKKEEELVTGHIWSMPMYNSRKLGELKERLKHSYSALKKEFRQVFE 1105
Query: 385 NLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPA 206
+ D + LT+ EKN +YE+KASAWYQVTYHP+W+KKS+EL+ D +LSFAW+ A
Sbjct: 1106 KMDLDFEQLTDDEKNLLYERKASAWYQVTYHPKWIKKSLELQEPDAAGNATILSFAWIAA 1165
Query: 205 EYLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
+YL RIKI+ R +D KP+NSL YL +I
Sbjct: 1166 DYLARIKIKHRGTEGVDTAKPVNSLVKYLADRI 1198
>ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1195
Score = 1143 bits (2956), Expect = 0.0
Identities = 558/809 (68%), Positives = 646/809 (79%), Gaps = 2/809 (0%)
Frame = -2
Query: 2527 LLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFM 2348
LLKNPK+ K+ K L D AE+RRLIITPTKAYCLPPEVELSNR+LRKY++ ADRFLRVTFM
Sbjct: 394 LLKNPKLFKNQKKLDDIAEIRRLIITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFM 453
Query: 2347 DEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSS 2168
DEG Q +NSN L Y+ APIVR +T SFPQKT +F RV++IL +GFYLCGR+YSFLAFSS
Sbjct: 454 DEGVQTMNSNALNYFAAPIVRAITSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSS 513
Query: 2167 NQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVN 1988
NQLRDRSAWFFAE NI V IKSWMGKFT+KN+AKC ARMG CFSST+AT+EVP E+VN
Sbjct: 514 NQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVN 573
Query: 1987 GNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKT 1808
+LPDI+RNGY FSDGIG ITPDLA+EVA KL+ +PP AYQIR+AGCKGVVACWPE+
Sbjct: 574 SDLPDIKRNGYDFSDGIGMITPDLAREVAEKLKFDFDPPSAYQIRYAGCKGVVACWPEQG 633
Query: 1807 DEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMV 1628
D RLS+R SM KFQS HT+LEI SWTRFQPGFLNRQII LLSAL VPD VF MQ MV
Sbjct: 634 DGIRLSLRSSMNKFQSNHTILEICSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQEIMV 693
Query: 1627 HKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLL 1448
KL +L ++D+AFDV+T+SCAE GN A +ML AGFKPQ EPHLRGML +RA Q L
Sbjct: 694 SKLNQMLVDSDVAFDVLTASCAELGNVAAIMLSAGFKPQKEPHLRGMLNCVRAAQLWGLR 753
Query: 1447 EKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKG 1268
EK RIFVP GRWLMGC DEL VLEQGQCFIQ S LENCF G FS K LQV+KG
Sbjct: 754 EKARIFVPSGRWLMGCLDELAVLEQGQCFIQVSNSYLENCFVKHGSKFSETKRNLQVVKG 813
Query: 1267 TVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVT 1088
TVV+AKNPCLHPGDIRILEAVD+PGLHHL DCLVFPQKG+RPHANEASGSDLDGDLYFVT
Sbjct: 814 TVVIAKNPCLHPGDIRILEAVDDPGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVT 873
Query: 1087 WDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVHAD 908
WDENL+PPSKRSWIPM Y E ++L R +N DI++FF KNM NE LG ICN+HVV AD
Sbjct: 874 WDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQDIIEFFAKNMANENLGAICNAHVVRAD 933
Query: 907 LSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVL 728
LS+YGA+DEKC+ LAELAATAVDFPKTGK+V+MP +LKPK+YPDFMGKE+ SYKSKK+L
Sbjct: 934 LSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKIL 993
Query: 727 GELYRKIKDS--PDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDG 554
G LYR+IKD+ D V SD + F D+PYD DLE+ G+ D+I +AWDRKC YDG
Sbjct: 994 GRLYRQIKDAYDDDDVAASSDLN----FVPGDVPYDLDLEVLGATDYISDAWDRKCSYDG 1049
Query: 553 QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGE 374
QLN LL Q+ VK EEEVVTGHVWSMPK ++R +YN +KREF++VF+ +
Sbjct: 1050 QLNGLLAQYKVKREEEVVTGHVWSMPKGSSRQQGDLKERLKHSYNCLKREFRQVFEKMDL 1109
Query: 373 DSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLV 194
D L + EKN +YE+KASAWYQVTYHPRW++KS+EL++SD MLSFAW+ A+YL
Sbjct: 1110 DFGQLDDDEKNMLYERKASAWYQVTYHPRWIQKSLELQDSD---GAAMLSFAWIAADYLA 1166
Query: 193 RIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
RIKIR + ++D KPINSLA YL ++
Sbjct: 1167 RIKIRHSRIGNVDSAKPINSLAKYLADRM 1195
>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 1203
Score = 1142 bits (2953), Expect = 0.0
Identities = 558/816 (68%), Positives = 635/816 (77%), Gaps = 5/816 (0%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
VQ LLKNPK+ +S K L D E+RRL ITPT+AYCLPPEVELSNR+LR+Y++ AD+FLR
Sbjct: 390 VQQWLLKNPKLFRSSKQLDDIVEIRRLAITPTRAYCLPPEVELSNRVLRRYKDIADQFLR 449
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
VTFMDEG Q +N+N LTYY APIVRD+T NSF QKT +F RVK+IL DGFYLCGRKYSFL
Sbjct: 450 VTFMDEGLQTMNANTLTYYCAPIVRDITSNSFSQKTRIFKRVKSILTDGFYLCGRKYSFL 509
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFSSNQLRDRSAWFFAE V I++WMGKFT++N+AKC ARMG CFSST+ATVEVP
Sbjct: 510 AFSSNQLRDRSAWFFAEDGKTSVSKIRNWMGKFTNRNIAKCAARMGQCFSSTYATVEVPS 569
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
+ +LPDIERN Y+FSDGIG ITPDLAKEVA KL+L NPPCAYQIR+AGCKGVVACW
Sbjct: 570 AEAILDLPDIERNNYIFSDGIGMITPDLAKEVAEKLKLEVNPPCAYQIRYAGCKGVVACW 629
Query: 1819 PEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQ 1640
P D RLS+R SM KF S HT LEI SWTRFQPGFLNRQII LLS L VPD +F MQ
Sbjct: 630 PAHIDGIRLSLRVSMNKFHSNHTTLEICSWTRFQPGFLNRQIITLLSTLDVPDEIFWKMQ 689
Query: 1639 ATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQF 1460
MV KL + + D+AFDVVT+SCAEQGNTA +ML AGF P+TEPHL GMLT IRA Q
Sbjct: 690 IVMVSKLNQMFMDADVAFDVVTASCAEQGNTAAIMLSAGFNPKTEPHLCGMLTCIRAAQL 749
Query: 1459 RDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQ 1280
L EKTRIFVP GRWLMGC DELGVLE GQCFIQ S PSLE+CF G FS +K LQ
Sbjct: 750 WGLREKTRIFVPSGRWLMGCLDELGVLEHGQCFIQVSNPSLESCFWKHGSRFSESKKKLQ 809
Query: 1279 VIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 1100
V+KGTVVVAKNPCLHPGDIRILEAVD P LHHL DCLVFPQKGDRPH NEASGSDLDGDL
Sbjct: 810 VVKGTVVVAKNPCLHPGDIRILEAVDAPELHHLHDCLVFPQKGDRPHTNEASGSDLDGDL 869
Query: 1099 YFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHV 920
YFVTWDENL+PPSKRSW+PM Y E ++L R +N DI+DFF KNMVNE LG ICN+HV
Sbjct: 870 YFVTWDENLIPPSKRSWLPMQYDAAEAKQLNRPVNHQDIIDFFAKNMVNENLGAICNAHV 929
Query: 919 VHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKS 740
VHADLS+YGA+DE CIKLAELAATAVDFPKTGK+V MP LKPK+YPDFMGKED+ SY S
Sbjct: 930 VHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEDYQSYNS 989
Query: 739 KKVLGELYRKIKDSPDLVVGDSDKDTLAVFQV-----DDIPYDTDLEIPGSADFIREAWD 575
K+LG LYR++KD D D D D A DIPYD DLE+ GS+D+I +AWD
Sbjct: 990 NKILGRLYRQVKD--DYNDDDDDDDDAATSSELNLVRGDIPYDKDLEVSGSSDYILDAWD 1047
Query: 574 RKCLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKR 395
+KC YDGQL LL Q+ VK EEEVVTGH+WSMPK N+R +Y+S+K+EF++
Sbjct: 1048 QKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQGELKERLKQSYHSLKKEFRQ 1107
Query: 394 VFDNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAW 215
VF+ + D + LTE EKN +YEQKASAWYQV YHP+WV KS+EL+ D MLSFAW
Sbjct: 1108 VFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNKSMELQEPDAAGCASMLSFAW 1167
Query: 214 VPAEYLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
+ A+YL RIKIR R +D KP+NSL YL +I
Sbjct: 1168 IAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203
>ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
gi|643724398|gb|KDP33599.1| hypothetical protein
JCGZ_07170 [Jatropha curcas]
Length = 1199
Score = 1141 bits (2951), Expect = 0.0
Identities = 556/813 (68%), Positives = 635/813 (78%), Gaps = 2/813 (0%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
VQ LLKNPK+ K K L D E+RRL +TPT+AYCLPPEVELSNR+LRKY+ ADRFLR
Sbjct: 390 VQEWLLKNPKLFKRSKQLDDIVEIRRLALTPTRAYCLPPEVELSNRVLRKYKNIADRFLR 449
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
VTFMDEG Q +N+N LTYYVAPIVRD+T SF QKT +F RVK+IL DGF LCGR+YSFL
Sbjct: 450 VTFMDEGLQTINANTLTYYVAPIVRDITSTSFSQKTRIFRRVKSILTDGFNLCGRRYSFL 509
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFSSNQLRDRSAWFFAE I VG I+ WMG+FT++N+AKC ARMG CFSST+ATVEVP
Sbjct: 510 AFSSNQLRDRSAWFFAEDGKISVGQIRKWMGRFTNRNIAKCAARMGQCFSSTYATVEVPS 569
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
+VN LPDIERNGY+FSDGIG ITPDLAKEVA KL+L N PCAYQIR+AGCKGVVACW
Sbjct: 570 SEVNHALPDIERNGYIFSDGIGTITPDLAKEVAEKLKLDINLPCAYQIRYAGCKGVVACW 629
Query: 1819 PEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQ 1640
P + D RLS+RPSM KFQS HT LEI SWTRFQPGFLNRQII LLS L V D VF MQ
Sbjct: 630 PAQGDGIRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNVSDEVFWEMQ 689
Query: 1639 ATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQF 1460
MV KL +L + D+AFDV+T SCAEQGNTA +ML AGFKPQ EPHLRGMLT IRA QF
Sbjct: 690 TAMVSKLNKMLTDADVAFDVITKSCAEQGNTAAIMLSAGFKPQNEPHLRGMLTCIRAAQF 749
Query: 1459 RDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQ 1280
L EK RIFV GRWLMGC DELGVLEQGQCFIQ S P LE CFS G FS K LQ
Sbjct: 750 WGLREKARIFVTSGRWLMGCLDELGVLEQGQCFIQVSNPCLETCFSKHGSKFSETKKNLQ 809
Query: 1279 VIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 1100
VIKGTVV+AKNPCLHPGD+RILEAVD PGLHHL DCLVFPQKGDRPH NEASGSDLDGDL
Sbjct: 810 VIKGTVVIAKNPCLHPGDVRILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSDLDGDL 869
Query: 1099 YFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHV 920
YFVTWD+NL+PPSK+SW PM Y E + L R ++ DI+DFF KNMVNE LG ICN+HV
Sbjct: 870 YFVTWDDNLIPPSKKSWTPMQYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAICNAHV 929
Query: 919 VHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKS 740
VHADLS++GA+DE CIKLAELAATAVDFPKTGK+V MP LKPKMYPDFMGKE++ SYKS
Sbjct: 930 VHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEYQSYKS 989
Query: 739 KKVLGELYRKIKDSPDLVVGDSDKDTLAVFQV--DDIPYDTDLEIPGSADFIREAWDRKC 566
K+LG LYR+I D+ GD D + DIPYD DLE+ GSAD+I EAWD+KC
Sbjct: 990 TKILGRLYRQIIDA----YGDDDAAAFSELNCLSGDIPYDADLEVLGSADYILEAWDQKC 1045
Query: 565 LYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFD 386
YDGQL LL Q+ VK EEE+VTGH+WSMP N+R +Y+++K+EF++VF+
Sbjct: 1046 SYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNSRKQGDLKERLKHSYSALKKEFRQVFE 1105
Query: 385 NLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPA 206
+ D + LT+ EKN YE+KASAWYQV YHP+W+KKS+EL+ SD MLSF+W+ A
Sbjct: 1106 GMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKWIKKSLELQESDAPGNATMLSFSWIAA 1165
Query: 205 EYLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
+YL RIKI+RR +D KP+NSL YL +I
Sbjct: 1166 DYLARIKIKRRGTEGIDTAKPVNSLVKYLTDRI 1198
>ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
Length = 1196
Score = 1137 bits (2941), Expect = 0.0
Identities = 555/812 (68%), Positives = 645/812 (79%), Gaps = 1/812 (0%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
VQ LLKNPK++K K L D EVRRL+ITPTKAYCLPPEVELSNR+LRKY+E ADRFLR
Sbjct: 389 VQDWLLKNPKLVKDPKRLDDIVEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLR 448
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
VTFMDEG Q++NSNVL YYVAPIV+++T NSF QKT VF R + IL DGFYLCGRKY+FL
Sbjct: 449 VTFMDEGMQKINSNVLNYYVAPIVKEITSNSFLQKTNVFKRFRNILNDGFYLCGRKYTFL 508
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFSSNQLRDRSAWFFAE NI VG I SWMGKF +KNVAKC ARMG CFSST+ATVEVP
Sbjct: 509 AFSSNQLRDRSAWFFAECVNISVGKITSWMGKFNNKNVAKCAARMGQCFSSTYATVEVPS 568
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
+VN ++PDIERNGY+FSDGIG ITPDLA EVA KL+L NPPCAYQIRFAGCKGVVACW
Sbjct: 569 SEVN-DIPDIERNGYIFSDGIGMITPDLALEVAEKLKLDRNPPCAYQIRFAGCKGVVACW 627
Query: 1819 PEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQ 1640
P K D FRLS+R SM KF+SKH LEI SWTR+QPGFLNRQII LLS L V D +F MQ
Sbjct: 628 PSKGDRFRLSLRTSMNKFESKHATLEICSWTRYQPGFLNRQIITLLSTLKVEDEIFWRMQ 687
Query: 1639 ATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQF 1460
MV KL +L +TD+AFDV+TSSCAEQGN A +ML AGFKPQTEPHLRGMLT I+A Q
Sbjct: 688 EKMVLKLNQMLVDTDVAFDVLTSSCAEQGNAAAIMLSAGFKPQTEPHLRGMLTCIQAAQL 747
Query: 1459 RDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQ 1280
L EK RIFV GRWLMG DELGVLEQGQCF+Q S PSLE+CF+ G F+ + LQ
Sbjct: 748 WGLREKARIFVHSGRWLMGVLDELGVLEQGQCFVQVSTPSLESCFAKHGSSFAQIERNLQ 807
Query: 1279 VIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 1100
VIKG VV+AKNPCLHPGDIRILEAVD PGLHHL DCLVFPQKGDRPH +EASGSDLDGDL
Sbjct: 808 VIKGYVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGDRPHTDEASGSDLDGDL 867
Query: 1099 YFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHV 920
YFVTWDENL+PPSK+SW+PM Y P E ++ R + Q DI+DFFVKNM NE LG ICN+HV
Sbjct: 868 YFVTWDENLIPPSKKSWMPMQYDPAEAKRQGRPVTQQDIIDFFVKNMTNENLGPICNAHV 927
Query: 919 VHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKS 740
VHAD SDYGA+DE C+KLAELAA AVDFPKTGK+V +PQ LKP++YPDF+GKED SYKS
Sbjct: 928 VHADRSDYGALDENCLKLAELAALAVDFPKTGKIVTLPQHLKPRLYPDFLGKEDNQSYKS 987
Query: 739 KKVLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLY 560
K+LG LYRK++D+ D D+ + + DIPYD DLE+PG+ADFI +AW++KC Y
Sbjct: 988 TKILGRLYRKVRDAYD---EDAATTSELHYVPSDIPYDMDLEVPGAADFIFDAWEKKCSY 1044
Query: 559 DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 380
DGQL L+ Q+ VK EEE+VTGHVWS+PK N++ +YN++K+EF+++F+NL
Sbjct: 1045 DGQLKGLMGQYKVKREEEIVTGHVWSIPKSNSKKQGELKERLSHSYNALKKEFRQMFENL 1104
Query: 379 GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDK-VATPMLSFAWVPAE 203
+ + LT+ EKN + E+KASAWYQVTYHP+WVK+S L+ D MLSFAW+ A+
Sbjct: 1105 DSNLEALTDDEKNILCEKKASAWYQVTYHPKWVKQSPPLQEPDGPGDVVVMLSFAWIAAD 1164
Query: 202 YLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
YL RIKI+ R V H+D KPINSL YL +I
Sbjct: 1165 YLARIKIKCRGVEHIDSTKPINSLKRYLADRI 1196
>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
Length = 1035
Score = 1129 bits (2921), Expect = 0.0
Identities = 557/808 (68%), Positives = 640/808 (79%), Gaps = 1/808 (0%)
Frame = -2
Query: 2527 LLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFM 2348
LLKNPK++KS K L D EVRRL+ITP+KAYCLPPEVELSNR+LR Y+E +DRFLRVTFM
Sbjct: 234 LLKNPKLLKSPKELDDIVEVRRLVITPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFM 293
Query: 2347 DEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSS 2168
DEG Q +N+NVL YYVAPIV+ +T NSFPQKT VF RVKTIL DGFYLCGRKYSFLAFSS
Sbjct: 294 DEGMQTINANVLNYYVAPIVKVITSNSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSS 353
Query: 2167 NQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVN 1988
NQLRDRSAWFFAE V IKSWMGKFT++NVAKC ARMG CFSST+ATVEVP +V
Sbjct: 354 NQLRDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVAKCAARMGQCFSSTYATVEVPSWEVK 413
Query: 1987 GNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKT 1808
LPDI+RNGY FSDGIGKI PDLA EVA KL+L P AYQIR+AGCKGVVACWP
Sbjct: 414 -ELPDIKRNGYDFSDGIGKIVPDLAMEVAEKLKLEGTPS-AYQIRYAGCKGVVACWPSDN 471
Query: 1807 DEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMV 1628
D RLS RPSM KF S HT+LEI SWTRFQPGFLNRQI+ LLSAL VPD +F MQ +M+
Sbjct: 472 DGIRLSWRPSMNKFLSDHTILEICSWTRFQPGFLNRQIVTLLSALNVPDKIFWKMQESMI 531
Query: 1627 HKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLL 1448
KL +L +TD+AFDV+ +SCAEQGNTA +ML AGFKPQTEPHL+GMLT IRA QF L
Sbjct: 532 SKLNQMLTDTDVAFDVLIASCAEQGNTAAIMLSAGFKPQTEPHLQGMLTCIRAAQFWGLR 591
Query: 1447 EKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKG 1268
EK RIFVP GRWLMGC DELGVLEQGQCFIQ S PSLENCF G FS K L+VIKG
Sbjct: 592 EKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSSPSLENCFLKHGSRFSAQK-NLKVIKG 650
Query: 1267 TVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVT 1088
V +AKNPCLHPGD+RILEAVD PGL HLVDCLVFPQKGDRPH+NEASGSDLDGDLYFVT
Sbjct: 651 IVAIAKNPCLHPGDVRILEAVDAPGLEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVT 710
Query: 1087 WDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVHAD 908
W+E L+PPSK+SW PM Y E + L R + DI+DFF KNMVNE LG ICN+HVVHAD
Sbjct: 711 WEETLIPPSKQSWPPMQYDSAEAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVHAD 770
Query: 907 LSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVL 728
S+YGA+DE C+ LAE AATAVDFPKTGK+V +P LKPKMYPDFMGKE+F +Y+S K+L
Sbjct: 771 RSEYGALDEACLDLAERAATAVDFPKTGKLVTLPPYLKPKMYPDFMGKEEFQTYRSNKIL 830
Query: 727 GELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDGQL 548
G++YR+IKD+ + V +S + +F D +P+D DL IPGSADFI +AW KC YDGQL
Sbjct: 831 GKMYRQIKDAYNEDVSESSEQ---IFGADKVPFDEDLGIPGSADFINDAWIHKCSYDGQL 887
Query: 547 NALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGEDS 368
N LL Q+ VK EEEVVTGHVWSMPKY +R AY+S+K+EF+++F+ + D
Sbjct: 888 NGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDF 947
Query: 367 QNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVA-TPMLSFAWVPAEYLVR 191
LT+ EKN +YEQKASAWYQVTYHP WVKKS+EL+N D+ MLSFAW+ A+YL R
Sbjct: 948 DQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYLAR 1007
Query: 190 IKIRRRDVRHLDMEKPINSLAGYLVGKI 107
IKIRR+ ++D KPINSLA +LV +I
Sbjct: 1008 IKIRRKGTGNVDSSKPINSLARFLVDRI 1035
>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
gi|731385864|ref|XP_010648660.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Vitis vinifera]
gi|731385866|ref|XP_010648661.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Vitis vinifera]
Length = 1197
Score = 1129 bits (2921), Expect = 0.0
Identities = 557/808 (68%), Positives = 640/808 (79%), Gaps = 1/808 (0%)
Frame = -2
Query: 2527 LLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFM 2348
LLKNPK++KS K L D EVRRL+ITP+KAYCLPPEVELSNR+LR Y+E +DRFLRVTFM
Sbjct: 396 LLKNPKLLKSPKELDDIVEVRRLVITPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFM 455
Query: 2347 DEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSS 2168
DEG Q +N+NVL YYVAPIV+ +T NSFPQKT VF RVKTIL DGFYLCGRKYSFLAFSS
Sbjct: 456 DEGMQTINANVLNYYVAPIVKVITSNSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSS 515
Query: 2167 NQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVN 1988
NQLRDRSAWFFAE V IKSWMGKFT++NVAKC ARMG CFSST+ATVEVP +V
Sbjct: 516 NQLRDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVAKCAARMGQCFSSTYATVEVPSWEVK 575
Query: 1987 GNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKT 1808
LPDI+RNGY FSDGIGKI PDLA EVA KL+L P AYQIR+AGCKGVVACWP
Sbjct: 576 -ELPDIKRNGYDFSDGIGKIVPDLAMEVAEKLKLEGTPS-AYQIRYAGCKGVVACWPSDN 633
Query: 1807 DEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMV 1628
D RLS RPSM KF S HT+LEI SWTRFQPGFLNRQI+ LLSAL VPD +F MQ +M+
Sbjct: 634 DGIRLSWRPSMNKFLSDHTILEICSWTRFQPGFLNRQIVTLLSALNVPDKIFWKMQESMI 693
Query: 1627 HKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLL 1448
KL +L +TD+AFDV+ +SCAEQGNTA +ML AGFKPQTEPHL+GMLT IRA QF L
Sbjct: 694 SKLNQMLTDTDVAFDVLIASCAEQGNTAAIMLSAGFKPQTEPHLQGMLTCIRAAQFWGLR 753
Query: 1447 EKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKG 1268
EK RIFVP GRWLMGC DELGVLEQGQCFIQ S PSLENCF G FS K L+VIKG
Sbjct: 754 EKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSSPSLENCFLKHGSRFSAQK-NLKVIKG 812
Query: 1267 TVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVT 1088
V +AKNPCLHPGD+RILEAVD PGL HLVDCLVFPQKGDRPH+NEASGSDLDGDLYFVT
Sbjct: 813 IVAIAKNPCLHPGDVRILEAVDAPGLEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVT 872
Query: 1087 WDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVHAD 908
W+E L+PPSK+SW PM Y E + L R + DI+DFF KNMVNE LG ICN+HVVHAD
Sbjct: 873 WEETLIPPSKQSWPPMQYDSAEAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVHAD 932
Query: 907 LSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVL 728
S+YGA+DE C+ LAE AATAVDFPKTGK+V +P LKPKMYPDFMGKE+F +Y+S K+L
Sbjct: 933 RSEYGALDEACLDLAERAATAVDFPKTGKLVTLPPYLKPKMYPDFMGKEEFQTYRSNKIL 992
Query: 727 GELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDGQL 548
G++YR+IKD+ + V +S + +F D +P+D DL IPGSADFI +AW KC YDGQL
Sbjct: 993 GKMYRQIKDAYNEDVSESSEQ---IFGADKVPFDEDLGIPGSADFINDAWIHKCSYDGQL 1049
Query: 547 NALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGEDS 368
N LL Q+ VK EEEVVTGHVWSMPKY +R AY+S+K+EF+++F+ + D
Sbjct: 1050 NGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDF 1109
Query: 367 QNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVA-TPMLSFAWVPAEYLVR 191
LT+ EKN +YEQKASAWYQVTYHP WVKKS+EL+N D+ MLSFAW+ A+YL R
Sbjct: 1110 DQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYLAR 1169
Query: 190 IKIRRRDVRHLDMEKPINSLAGYLVGKI 107
IKIRR+ ++D KPINSLA +LV +I
Sbjct: 1170 IKIRRKGTGNVDSSKPINSLARFLVDRI 1197
>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
gi|462422376|gb|EMJ26639.1| hypothetical protein
PRUPE_ppa000422mg [Prunus persica]
Length = 1196
Score = 1129 bits (2919), Expect = 0.0
Identities = 552/812 (67%), Positives = 644/812 (79%), Gaps = 1/812 (0%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
VQ LLKNPK++K K L D AEVRRL+ITPTKAYCLPPEVELSNR+LRKY+E ADRFLR
Sbjct: 389 VQDWLLKNPKLVKDPKRLDDIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLR 448
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
VTFMDEG Q++NSNVL YYVAPIV+++T NSF QKT VF R +TIL DGFYLCGRKY+FL
Sbjct: 449 VTFMDEGMQKINSNVLNYYVAPIVKEITSNSFLQKTNVFKRFRTILNDGFYLCGRKYTFL 508
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFSSNQLRDRSAWFFAE NI VG I SWMGKF +KNVAKC ARMG CFSST+ATVEV
Sbjct: 509 AFSSNQLRDRSAWFFAECVNISVGKITSWMGKFNNKNVAKCAARMGQCFSSTYATVEVTS 568
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
+VN ++PDI+RNGYVFSDGIG ITPDLA EVA KL+L NPPCAYQIRFAGCKGVVACW
Sbjct: 569 SEVN-DIPDIKRNGYVFSDGIGMITPDLALEVAEKLKLDRNPPCAYQIRFAGCKGVVACW 627
Query: 1819 PEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQ 1640
P K D FRLS+R SM KF+SKHT LEI SWTR+QPGFLNRQII LLS L V D +F MQ
Sbjct: 628 PSKGDGFRLSLRTSMNKFESKHTTLEICSWTRYQPGFLNRQIITLLSTLNVEDEIFWRMQ 687
Query: 1639 ATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQF 1460
MV KL +L +TD+AFDV+T+SCAEQGN A +ML AGFKPQTEPHLRGMLT I+A Q
Sbjct: 688 EKMVLKLNQMLVDTDVAFDVLTASCAEQGNAAAIMLSAGFKPQTEPHLRGMLTCIQAAQL 747
Query: 1459 RDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQ 1280
L EK RIFV GRWLMG DELGVLEQGQCF+Q S P LE+CF+ G F+ + LQ
Sbjct: 748 WGLREKARIFVHSGRWLMGVLDELGVLEQGQCFVQVSTPLLESCFAKHGSSFAQIERNLQ 807
Query: 1279 VIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 1100
VIKG VV+AKNPCLHPGDIRILEAVD PGLHHL DCLVFPQKGDRPH +EASGSDLDGDL
Sbjct: 808 VIKGHVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGDRPHTDEASGSDLDGDL 867
Query: 1099 YFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHV 920
YFVTWDENL+PPSK+SW+PM Y P E + R + Q DI+DFFVKNM NE LG ICN+HV
Sbjct: 868 YFVTWDENLIPPSKKSWMPMQYDPAEAKLQGRPVTQQDIIDFFVKNMTNENLGPICNAHV 927
Query: 919 VHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKS 740
VHAD SDYGA+D C+KLAELAA AVDFPKTGK+V++PQ LKP++YPDF+GKED SYKS
Sbjct: 928 VHADRSDYGALDVNCLKLAELAALAVDFPKTGKIVSLPQHLKPRLYPDFLGKEDNQSYKS 987
Query: 739 KKVLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLY 560
K+LG LYRK++D+ D D+ + + DIPYD DLE+PG+ADF+ +AW++KC Y
Sbjct: 988 TKILGRLYRKVRDAYD---EDAATSSELHYFPSDIPYDMDLEVPGAADFVFDAWEKKCSY 1044
Query: 559 DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 380
DGQL L+ Q+ VK EEE+VTGHVWS+PK N++ +YN++K+EF+++F+NL
Sbjct: 1045 DGQLKGLMGQYKVKREEEIVTGHVWSIPKSNSKKQGELKERLSHSYNALKKEFRQMFENL 1104
Query: 379 GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDK-VATPMLSFAWVPAE 203
+ + LT+ EKN + E+KASAWYQVTYHP+WVK+S L+ D MLSFAW+ A+
Sbjct: 1105 DSNLEALTDDEKNLLCEKKASAWYQVTYHPKWVKQSPPLQEPDGPGDVVVMLSFAWIAAD 1164
Query: 202 YLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
YL RIKI+ V H+D KPINSL YL +I
Sbjct: 1165 YLARIKIKCHGVEHIDSTKPINSLKRYLADRI 1196
>emb|CDP13507.1| unnamed protein product [Coffea canephora]
Length = 1049
Score = 1125 bits (2910), Expect = 0.0
Identities = 553/812 (68%), Positives = 642/812 (79%)
Frame = -2
Query: 2542 TVQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFL 2363
+VQ L KNPK+ + K L D EVRR+IITP+KAYCLPPEVELSNR+LR YR+ ADRFL
Sbjct: 241 SVQQWLHKNPKLTERPKQLDDIVEVRRVIITPSKAYCLPPEVELSNRVLRHYRDIADRFL 300
Query: 2362 RVTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSF 2183
RVTFMDEG Q LN NVL+YY APIV D+T NS Q+T +F RVK IL GFY+CGRKYSF
Sbjct: 301 RVTFMDEGMQTLNKNVLSYYAAPIVWDVTSNSNLQRTSMFKRVKDILSKGFYICGRKYSF 360
Query: 2182 LAFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVP 2003
LAFS+NQLRDRSAWFFAE N++V +I SWMG+F D+NVAKC ARMG CFSST+ATVEVP
Sbjct: 361 LAFSANQLRDRSAWFFAENKNVRVANIISWMGRFADRNVAKCAARMGQCFSSTYATVEVP 420
Query: 2002 FEQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVAC 1823
QV+ LPDI+RN +VFSDGIG +T DLA EVA +L+LT NPPCAYQIR+AGCKGVVAC
Sbjct: 421 PSQVDSELPDIKRNTFVFSDGIGMMTSDLAAEVAERLRLTENPPCAYQIRYAGCKGVVAC 480
Query: 1822 WPEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLM 1643
WP KT+ RL +R SM KF S HT+LEI SWTRFQPGFLNRQII LLSALGV D +F M
Sbjct: 481 WPSKTNGHRLYLRESMRKFDSTHTILEICSWTRFQPGFLNRQIITLLSALGVQDNIFWRM 540
Query: 1642 QATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQ 1463
Q +M+ +L +LE+TD+AFDVVT+SCAEQGNT +ML AGF P+TEPHLRGMLT++RA Q
Sbjct: 541 QESMISRLNLMLEDTDVAFDVVTASCAEQGNTPAIMLSAGFNPETEPHLRGMLTSVRAAQ 600
Query: 1462 FRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGL 1283
DL EK RIFV GRWLMGC DEL VLEQGQCFIQ S P LENCF G FS K L
Sbjct: 601 LGDLREKARIFVASGRWLMGCLDELAVLEQGQCFIQVSGPCLENCFFRHGSKFSETKKNL 660
Query: 1282 QVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGD 1103
QVIKG VV+AKNPCLHPGD+RILEAVD P L HL DCLVFPQKGDRPHANEASGSDLDGD
Sbjct: 661 QVIKGLVVIAKNPCLHPGDVRILEAVDAPELRHLTDCLVFPQKGDRPHANEASGSDLDGD 720
Query: 1102 LYFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSH 923
LYFVTWD NL+PPSKRSW+PMDY+ E +KL R +N DI+DFF KNMV E LG ICN+H
Sbjct: 721 LYFVTWDGNLIPPSKRSWMPMDYASAEARKLPREVNHLDIIDFFSKNMVTESLGAICNAH 780
Query: 922 VVHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYK 743
VVHADLS+YGA+DEKCIKLAELAATAVDFPKTGK+V MP E KPKMYPDFMGKEDF SYK
Sbjct: 781 VVHADLSEYGALDEKCIKLAELAATAVDFPKTGKIVNMPSEYKPKMYPDFMGKEDFQSYK 840
Query: 742 SKKVLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCL 563
SKK+LG+LYR++KD+ D G++ L F + IPYDTDLEIPGS FI AW+ KC
Sbjct: 841 SKKILGKLYRQVKDACD--EGEAATSDL-TFPSNKIPYDTDLEIPGSEVFIEHAWNTKCS 897
Query: 562 YDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDN 383
YDGQLN LL Q+ V EEEVVTGH+WSMPKY+++ AYN++++EF+RVF+
Sbjct: 898 YDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSSKKLGDLKERLKHAYNNLRKEFRRVFEQ 957
Query: 382 LGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAE 203
+ + + LT+ EKN +YE+KASAWYQVTYHP W+++ +EL+ D T MLSFAW+ +
Sbjct: 958 MEPNFELLTDDEKNVMYEKKASAWYQVTYHPTWLQRLLELQLPDGVEETVMLSFAWIAVD 1017
Query: 202 YLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
YL +IKIR R +LD KPI+SL YL KI
Sbjct: 1018 YLAQIKIRCRGSWNLDSSKPIDSLGRYLSDKI 1049
>ref|XP_004291459.2| PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Fragaria vesca
subsp. vesca]
Length = 1200
Score = 1125 bits (2909), Expect = 0.0
Identities = 543/811 (66%), Positives = 640/811 (78%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
VQ LL+NPK+IK+ K L D AEVRRL+ITPTKAYCLPPEVELSNR+LRKY+E ADRFLR
Sbjct: 393 VQEWLLRNPKLIKNPKRLDDIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLR 452
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
VTFMDEG Q +NSNV+ YVAPIV+++T+N+FPQKT V+ R++ IL +GF+LCGRKYSFL
Sbjct: 453 VTFMDEGMQTMNSNVMNSYVAPIVKEITENTFPQKTKVYVRIRAILMNGFHLCGRKYSFL 512
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFSSNQLRDRSAWFFAE I + IK+WMG+FT++NVAKC ARMG CFSST+ATVEVP
Sbjct: 513 AFSSNQLRDRSAWFFAEDKTISIQGIKNWMGRFTNRNVAKCAARMGQCFSSTYATVEVPS 572
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
QVN LPDIERNGYVFSDGIG+ITPDLA EVA KL+L +PP AYQIR+ GCKGVVACW
Sbjct: 573 TQVNHELPDIERNGYVFSDGIGRITPDLAMEVAEKLKLDRDPPSAYQIRYGGCKGVVACW 632
Query: 1819 PEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQ 1640
P D FRLS+R SM KF S HT LEI SWTR QPGFLNRQII LLSAL VPD +F MQ
Sbjct: 633 PSTGDGFRLSLRRSMNKFASDHTTLEICSWTRLQPGFLNRQIITLLSALNVPDEIFWTMQ 692
Query: 1639 ATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQF 1460
TMV KL +L +TD+AFDV+T+SCAEQGN+A +ML AGFKPQTEPHLRGMLT I+A Q
Sbjct: 693 ETMVSKLKQMLVDTDVAFDVLTASCAEQGNSAAIMLSAGFKPQTEPHLRGMLTCIQAAQL 752
Query: 1459 RDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQ 1280
L EKTRIFVP GRWLMGC DELGVLEQGQCF+Q S PSLENCF+ G F LQ
Sbjct: 753 WGLREKTRIFVPSGRWLMGCLDELGVLEQGQCFVQVSTPSLENCFAKHGSRFDQTDKNLQ 812
Query: 1279 VIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 1100
VIKG VVVAKNPCLHPGDIRILEAVD PGLHHL DCLVFPQKG RPH +EASGSDLDGDL
Sbjct: 813 VIKGFVVVAKNPCLHPGDIRILEAVDAPGLHHLHDCLVFPQKGHRPHTDEASGSDLDGDL 872
Query: 1099 YFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHV 920
YFVTWDENL+PP K+SW PM+Y P E + R++ D+++FFV+NMVNE LG ICN+HV
Sbjct: 873 YFVTWDENLIPPRKKSWQPMEYEPAEAKLSGRSVTSQDLIEFFVRNMVNENLGAICNAHV 932
Query: 919 VHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKS 740
VH+D S+YGA DE C+KLAELAA AVDFPKTGK+V MP LKPK+YPDFMGK+D+ SYKS
Sbjct: 933 VHSDRSEYGAFDENCLKLAELAAVAVDFPKTGKIVTMPPHLKPKLYPDFMGKQDYQSYKS 992
Query: 739 KKVLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLY 560
K+LG LYRKI D+ D V +S + D+ YD DLE+P +ADFI +AW+RKC Y
Sbjct: 993 NKILGRLYRKICDAYDEDVANSSEQN---HVPSDVKYDMDLEVPKAADFIADAWERKCSY 1049
Query: 559 DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 380
D QL L+ Q+ + EEE+VTGHVWSMPKY +R +Y+++K+EF++ F+ +
Sbjct: 1050 DSQLRGLMTQYKIMREEEIVTGHVWSMPKYTSRKQGELQERLKHSYSALKKEFRQFFEKM 1109
Query: 379 GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEY 200
++L + +KN+ YEQKASAWYQVTYHP WVKKS++L D MLSFAW+ A+Y
Sbjct: 1110 DTGFESLIDDQKNSFYEQKASAWYQVTYHPDWVKKSLDLHGPDGPGDVVMLSFAWIAADY 1169
Query: 199 LVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
L RIKI+RR+V ++D +KPIN L YL +I
Sbjct: 1170 LARIKIKRREVSNIDPKKPINILTKYLADRI 1200
>ref|XP_010250107.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
Length = 1200
Score = 1125 bits (2909), Expect = 0.0
Identities = 548/811 (67%), Positives = 649/811 (80%), Gaps = 4/811 (0%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
VQ L NPK+IKS K DS EVRRL+ITPT+AYCLPPEVELSNR+LRKY+ +DRFLR
Sbjct: 388 VQTWFLDNPKLIKSSKESDDSVEVRRLVITPTRAYCLPPEVELSNRVLRKYKHVSDRFLR 447
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
V+F DE QQL+ L Y+V+PIV+D+ SF QKT VFNRVKTIL +GF LCGRKYS L
Sbjct: 448 VSFKDERMQQLSCKDLIYHVSPIVKDIKSKSFTQKTTVFNRVKTILTNGFSLCGRKYSLL 507
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFSSNQLRDRSAWFFAE N V D+K WMGKF ++NVAKC ARMG CFSST+ATVEVP
Sbjct: 508 AFSSNQLRDRSAWFFAEDKNTAVMDVKKWMGKFANRNVAKCAARMGQCFSSTYATVEVPL 567
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
+ VN LPDIERNGYVFSDGIG +TPDLA +VA KLQLT+NPPCAYQIR+AGCKGVV CW
Sbjct: 568 KNVNLGLPDIERNGYVFSDGIGMLTPDLAIDVAEKLQLTTNPPCAYQIRYAGCKGVVVCW 627
Query: 1819 PE---KTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFS 1649
P + D RLS+RPSM KF+S HT LE+ SWTRFQPG+LNRQII LLSAL VPD VFS
Sbjct: 628 PAAAGEEDGIRLSLRPSMNKFESGHTTLEVCSWTRFQPGYLNRQIITLLSALSVPDDVFS 687
Query: 1648 LMQATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRA 1469
+Q +MV KL +L+N D+AFDVVTS C EQG TA +ML AGF+PQ EPHL+GML+ IRA
Sbjct: 688 RLQDSMVSKLNQMLDNADVAFDVVTSLCPEQGKTAAIMLSAGFQPQMEPHLKGMLSCIRA 747
Query: 1468 GQFRDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKM 1289
Q RDLLEK++IFVP GR LMGC DEL VLE+GQCFIQ S PSLENCFS G FS K
Sbjct: 748 AQLRDLLEKSKIFVPAGRLLMGCLDELAVLEEGQCFIQVSTPSLENCFSKNGFRFSKAKK 807
Query: 1288 GLQVIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLD 1109
+ VI+G V +AKNPCLHPGD+RIL+AVD PGLHHLVDCLVFPQKG+RPH NEASGSDLD
Sbjct: 808 NVHVIEGIVAIAKNPCLHPGDVRILKAVDVPGLHHLVDCLVFPQKGERPHTNEASGSDLD 867
Query: 1108 GDLYFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICN 929
GDLYFVTWDE+L+PPSK+SW+PMDYSP E +K+ R +N D++ FF+K MVNEKLG ICN
Sbjct: 868 GDLYFVTWDEHLIPPSKQSWMPMDYSPVEARKMSREVNHHDLIKFFMKTMVNEKLGVICN 927
Query: 928 SHVVHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFIS 749
+HVVHADLS+YGA+D+KCI+LAELAA AVDFPKTG+VV MPQ LKPKMYPDFMGKEDF+S
Sbjct: 928 AHVVHADLSEYGALDKKCIRLAELAAKAVDFPKTGEVVTMPQSLKPKMYPDFMGKEDFLS 987
Query: 748 YKSKKVLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRK 569
Y+S K+LG+LYRKI+D D G + +A +DI YDTDLEI GSA F+ +AW++K
Sbjct: 988 YRSSKILGKLYRKIRDI-DSDNGMATSSEMACV-AEDISYDTDLEILGSAGFVTDAWNQK 1045
Query: 568 CLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVF 389
C YD Q ALL Q+ V EEEVVTGH+WSMPKYN+ AYN +K+EF++ F
Sbjct: 1046 CSYDAQFRALLGQYKVIREEEVVTGHIWSMPKYNSNKQGELKERLKHAYNVLKKEFRQAF 1105
Query: 388 DNLGED-SQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWV 212
+++ E + LTE EKN++YE+KASAWYQVTYHP+WV K+++LR +D PMLSFAW+
Sbjct: 1106 ESMDETFAIQLTEDEKNSVYEKKASAWYQVTYHPKWVMKTLKLREHEDDSMPPMLSFAWI 1165
Query: 211 PAEYLVRIKIRRRDVRHLDMEKPINSLAGYL 119
PA+YLVRIKI+ +++ +D+ KPIN+LA YL
Sbjct: 1166 PADYLVRIKIKHQNMEKVDIGKPINALASYL 1196
>ref|XP_011459183.1| PREDICTED: RNA-dependent RNA polymerase 6 isoform X2 [Fragaria vesca
subsp. vesca]
Length = 1197
Score = 1125 bits (2909), Expect = 0.0
Identities = 543/811 (66%), Positives = 640/811 (78%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
VQ LL+NPK+IK+ K L D AEVRRL+ITPTKAYCLPPEVELSNR+LRKY+E ADRFLR
Sbjct: 390 VQEWLLRNPKLIKNPKRLDDIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLR 449
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
VTFMDEG Q +NSNV+ YVAPIV+++T+N+FPQKT V+ R++ IL +GF+LCGRKYSFL
Sbjct: 450 VTFMDEGMQTMNSNVMNSYVAPIVKEITENTFPQKTKVYVRIRAILMNGFHLCGRKYSFL 509
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFSSNQLRDRSAWFFAE I + IK+WMG+FT++NVAKC ARMG CFSST+ATVEVP
Sbjct: 510 AFSSNQLRDRSAWFFAEDKTISIQGIKNWMGRFTNRNVAKCAARMGQCFSSTYATVEVPS 569
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
QVN LPDIERNGYVFSDGIG+ITPDLA EVA KL+L +PP AYQIR+ GCKGVVACW
Sbjct: 570 TQVNHELPDIERNGYVFSDGIGRITPDLAMEVAEKLKLDRDPPSAYQIRYGGCKGVVACW 629
Query: 1819 PEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQ 1640
P D FRLS+R SM KF S HT LEI SWTR QPGFLNRQII LLSAL VPD +F MQ
Sbjct: 630 PSTGDGFRLSLRRSMNKFASDHTTLEICSWTRLQPGFLNRQIITLLSALNVPDEIFWTMQ 689
Query: 1639 ATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQF 1460
TMV KL +L +TD+AFDV+T+SCAEQGN+A +ML AGFKPQTEPHLRGMLT I+A Q
Sbjct: 690 ETMVSKLKQMLVDTDVAFDVLTASCAEQGNSAAIMLSAGFKPQTEPHLRGMLTCIQAAQL 749
Query: 1459 RDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQ 1280
L EKTRIFVP GRWLMGC DELGVLEQGQCF+Q S PSLENCF+ G F LQ
Sbjct: 750 WGLREKTRIFVPSGRWLMGCLDELGVLEQGQCFVQVSTPSLENCFAKHGSRFDQTDKNLQ 809
Query: 1279 VIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 1100
VIKG VVVAKNPCLHPGDIRILEAVD PGLHHL DCLVFPQKG RPH +EASGSDLDGDL
Sbjct: 810 VIKGFVVVAKNPCLHPGDIRILEAVDAPGLHHLHDCLVFPQKGHRPHTDEASGSDLDGDL 869
Query: 1099 YFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHV 920
YFVTWDENL+PP K+SW PM+Y P E + R++ D+++FFV+NMVNE LG ICN+HV
Sbjct: 870 YFVTWDENLIPPRKKSWQPMEYEPAEAKLSGRSVTSQDLIEFFVRNMVNENLGAICNAHV 929
Query: 919 VHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKS 740
VH+D S+YGA DE C+KLAELAA AVDFPKTGK+V MP LKPK+YPDFMGK+D+ SYKS
Sbjct: 930 VHSDRSEYGAFDENCLKLAELAAVAVDFPKTGKIVTMPPHLKPKLYPDFMGKQDYQSYKS 989
Query: 739 KKVLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLY 560
K+LG LYRKI D+ D V +S + D+ YD DLE+P +ADFI +AW+RKC Y
Sbjct: 990 NKILGRLYRKICDAYDEDVANSSEQN---HVPSDVKYDMDLEVPKAADFIADAWERKCSY 1046
Query: 559 DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 380
D QL L+ Q+ + EEE+VTGHVWSMPKY +R +Y+++K+EF++ F+ +
Sbjct: 1047 DSQLRGLMTQYKIMREEEIVTGHVWSMPKYTSRKQGELQERLKHSYSALKKEFRQFFEKM 1106
Query: 379 GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEY 200
++L + +KN+ YEQKASAWYQVTYHP WVKKS++L D MLSFAW+ A+Y
Sbjct: 1107 DTGFESLIDDQKNSFYEQKASAWYQVTYHPDWVKKSLDLHGPDGPGDVVMLSFAWIAADY 1166
Query: 199 LVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
L RIKI+RR+V ++D +KPIN L YL +I
Sbjct: 1167 LARIKIKRREVSNIDPKKPINILTKYLADRI 1197
>ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris]
Length = 1197
Score = 1124 bits (2907), Expect = 0.0
Identities = 546/813 (67%), Positives = 646/813 (79%), Gaps = 2/813 (0%)
Frame = -2
Query: 2539 VQIRLLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLR 2360
+Q L+KNPK+++ L D EVRRL+ITPTKAYCLPP VELSNR+LR Y+ ADRFLR
Sbjct: 390 IQKWLMKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLR 449
Query: 2359 VTFMDEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFL 2180
VTFMDEG + LN NVLTYY A IVR++T NS PQ+T +F RVK+IL GF+LCGRKYSFL
Sbjct: 450 VTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYSFL 509
Query: 2179 AFSSNQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPF 2000
AFS+NQLRDRSAWFFAE I+V I SWMG+F+++NVAKC ARMG CFSST+ATVEVP
Sbjct: 510 AFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPS 569
Query: 1999 EQVNGNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACW 1820
+VN LPDIERNGYVFSDGIG I+ DLA EVA KL L+ NPP AYQIR+AGCKGVVACW
Sbjct: 570 REVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAGCKGVVACW 629
Query: 1819 PEKTDEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQ 1640
P K D RLS+RPSM KF S HT+LEI SWTRFQPGFLNRQI+ LLS+L V D +F MQ
Sbjct: 630 PTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQ 689
Query: 1639 ATMVHKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQF 1460
M+ L +L ++D+AFDV+T+SCAE GNTA +ML AGFKPQ+EPHLRGML++IRA Q
Sbjct: 690 KEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQL 749
Query: 1459 RDLLEKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQ 1280
DL K RIFVP GRWLMGC DELG LEQGQCFIQ S PSLENCF GP FS K LQ
Sbjct: 750 GDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPKFSDIKQNLQ 809
Query: 1279 VIKGTVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDL 1100
V+KG VV+AKNPCLHPGD+RILEAVD PGLHHL DCLVFPQKGDRPH+NEASGSDLDGDL
Sbjct: 810 VVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDL 869
Query: 1099 YFVTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHV 920
YFVTWDENL+PPSK+SWIPM+Y P E+++L R +N DI+DFF KNMV E LG ICN+HV
Sbjct: 870 YFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHV 929
Query: 919 VHADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKS 740
VHADLS++GA+DEKC+KLAELAA AVDFPKTGK+V MP +LKPKMYPDFMGKE+F SYKS
Sbjct: 930 VHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKS 989
Query: 739 KKVLGELYRKIKDSPDLVVGDSDKDTLAVFQV--DDIPYDTDLEIPGSADFIREAWDRKC 566
KK+LG+LYR++KD V D++ + A ++ +DIPYD+ LEIPGS FI +AW+ KC
Sbjct: 990 KKILGKLYRQVKD-----VCDTEGEVSAGLELVPNDIPYDSSLEIPGSTAFIDDAWNSKC 1044
Query: 565 LYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFD 386
YDGQL+ LL Q+ V EEEVVTGH+WSMPKY+ + AYN++++EF+ VF+
Sbjct: 1045 SYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFE 1104
Query: 385 NLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPA 206
+ D L + EKN +YE+KASAWYQVTY+P WV +S+EL+ D +T MLSFAW+ A
Sbjct: 1105 RMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAISSTVMLSFAWIAA 1164
Query: 205 EYLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
+YL RIKIR R +++ D KPINSL YLV KI
Sbjct: 1165 DYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197
>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
Length = 1197
Score = 1121 bits (2900), Expect = 0.0
Identities = 544/809 (67%), Positives = 643/809 (79%), Gaps = 2/809 (0%)
Frame = -2
Query: 2527 LLKNPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFM 2348
LLKNPK+++ L D EVRRL+ITPTKAYCLPP VELSNR+LR Y+ ADRFLRVTFM
Sbjct: 394 LLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFM 453
Query: 2347 DEGSQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSS 2168
DEG + LN NVLTYY A IVR++T NS PQ+T +F RVK+IL GF+LCGRKYSFLAFS+
Sbjct: 454 DEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSA 513
Query: 2167 NQLRDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVN 1988
NQLRDRSAWFFAE I+V I SWMG+F+++NVAKC ARMG CFSST+ATVEVP +VN
Sbjct: 514 NQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVN 573
Query: 1987 GNLPDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKT 1808
LPDIERNGYVFSDGIG I+ DLA EVA KL L+ NPP AYQIR+AGCKGVVACWP K
Sbjct: 574 SELPDIERNGYVFSDGIGMISADLAVEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKN 633
Query: 1807 DEFRLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMV 1628
D RLS+RPSM KF S HT+LEI SWTRFQPGFLNRQI+ LLS+L V D +F MQ M+
Sbjct: 634 DGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMI 693
Query: 1627 HKLCHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLL 1448
L +L ++D+AFDV+T+SCAE GNTA +ML AGFKPQ+EPHLRGML++IRA Q DL
Sbjct: 694 SGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLR 753
Query: 1447 EKTRIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKG 1268
K RIFVP GRWLMGC DELG LEQGQCFIQ S PSLENCF GP FS K LQV+KG
Sbjct: 754 NKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKG 813
Query: 1267 TVVVAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVT 1088
VV+AKNPCLHPGD+RILEAVD PGLHHL DCLVFPQKGDRPH+NEASGSDLDGDLYFVT
Sbjct: 814 LVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVT 873
Query: 1087 WDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVHAD 908
WDENL+PPSK+SWIPM+Y P E++++ R +N DI+DFF KNMV E LG ICN+HVVHAD
Sbjct: 874 WDENLIPPSKKSWIPMNYEPAEVKQMGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHAD 933
Query: 907 LSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVL 728
LS++GA+DEKC+KLAELAA AVDFPKTGK+V MP +LKPKMYPDFMGKE+F SYKSKK+L
Sbjct: 934 LSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKIL 993
Query: 727 GELYRKIKDSPDLVVGDSDKDTLAVFQV--DDIPYDTDLEIPGSADFIREAWDRKCLYDG 554
G+LYR++KD V D++ + A ++ +DIPYD+ LEIPGS FI +AW+ KC YDG
Sbjct: 994 GKLYRQVKD-----VCDTEGEVSAGLELVPNDIPYDSSLEIPGSTAFIDDAWNSKCSYDG 1048
Query: 553 QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGE 374
QL+ LL Q+ V EEEVVTGH+WSMPKY+ + AYN++++EF+ VF+ +
Sbjct: 1049 QLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMEP 1108
Query: 373 DSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLV 194
D L + EKN +YE+KASAWYQVTY+P WV +S+EL+ D +T MLSFAW+ A+YL
Sbjct: 1109 DFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAVSSTVMLSFAWIAADYLA 1168
Query: 193 RIKIRRRDVRHLDMEKPINSLAGYLVGKI 107
RIKIR R +++ D KPINSL YLV I
Sbjct: 1169 RIKIRHRGLQYSDSTKPINSLGRYLVDNI 1197