BLASTX nr result

ID: Papaver30_contig00061899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00061899
         (506 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009788902.1| PREDICTED: F-box only protein 8-like [Nicoti...    67   5e-09
ref|XP_009597313.1| PREDICTED: F-box only protein 8-like [Nicoti...    64   4e-08
ref|XP_006356320.1| PREDICTED: F-box protein At3g08750-like isof...    60   5e-07

>ref|XP_009788902.1| PREDICTED: F-box only protein 8-like [Nicotiana sylvestris]
           gi|698484170|ref|XP_009788903.1| PREDICTED: F-box only
           protein 8-like [Nicotiana sylvestris]
          Length = 398

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 56/158 (35%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
 Frame = -1

Query: 506 SLMRFKCVFKYWLYLIQEDPSFADQHLEH*KTRPNLLITNLRDRTFTLMTADLLYERKGG 327
           SL+RFKCV K+W  LI+  PSF ++H  +   R  LLI NL     +   A  L   K  
Sbjct: 23  SLLRFKCVSKHWYALIKS-PSFIEKHFHYKNNRARLLICNLTISNLSKSVAFCLLPGKIV 81

Query: 326 AISTAAVHTIREIDGTYYDRRLGPVNGLIGFYGKTIPRGVCIC--NLSTREVTPRIESKS 153
              T    T+ +   T +    GPV+GL           VC+   N STRE  P +   S
Sbjct: 82  PGVTPEQKTLYQFQRTDFMSITGPVDGLFLVQKPFYDDDVCLALWNPSTREFWP-LPPVS 140

Query: 152 FSELRKKSRKRLHFPLASLALGYDPATKEHKVVGIWSF 39
           F EL+ +            ALGYDP+T+++KVV I  F
Sbjct: 141 F-ELQSEDYDE------QFALGYDPSTRDYKVVCIRRF 171


>ref|XP_009597313.1| PREDICTED: F-box only protein 8-like [Nicotiana tomentosiformis]
           gi|697176728|ref|XP_009597314.1| PREDICTED: F-box only
           protein 8-like [Nicotiana tomentosiformis]
          Length = 398

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 14/170 (8%)
 Frame = -1

Query: 506 SLMRFKCVFKYWLYLIQEDPSFADQHLEH*KTRPNLLITNL------RDRTFTLMTADLL 345
           SL+RFKCV K+W  LI+ +PSF ++H  +   R  LLI NL      +  TF+L+   ++
Sbjct: 23  SLLRFKCVCKHWYALIR-NPSFIEKHFHYKNNRARLLICNLIISNLSKSVTFSLLPGQIV 81

Query: 344 YERKGGAISTAAVHTIREIDGTYYDRRLGPVNGLIGFYGKTIPRGVCIC--NLSTREVTP 171
                    T    T+ +   T +    GPV+GL           VC+   N STRE  P
Sbjct: 82  ------PGVTPEQKTLYQFQRTDFMSITGPVDGLFLVQKPFYDDNVCLALWNPSTREFWP 135

Query: 170 ------RIESKSFSELRKKSRKRLHFPLASLALGYDPATKEHKVVGIWSF 39
                  ++S+ + E                ALGYDP+++++KVV I  F
Sbjct: 136 LPPVSFELQSEDYDE--------------QFALGYDPSSRDYKVVCIRRF 171


>ref|XP_006356320.1| PREDICTED: F-box protein At3g08750-like isoform X1 [Solanum
           tuberosum] gi|565379830|ref|XP_006356321.1| PREDICTED:
           F-box protein At3g08750-like isoform X2 [Solanum
           tuberosum]
          Length = 380

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
 Frame = -1

Query: 506 SLMRFKCVFKYWLYLIQEDPSFADQHLEH*KTRPNLLITNL------RDRTFTLMTADLL 345
           SL+RFKCV K+W Y +   PSF + H  H      LLI NL      +   F+L+ A ++
Sbjct: 23  SLLRFKCVCKHW-YALITSPSFIEMHFHHKHNHARLLICNLTISDKSKSIAFSLLPAKIV 81

Query: 344 YERKGGAISTAAVHTIREIDGTYYDRRLGPVNGLI-----GFYGKTIPRGVCICNLSTRE 180
              +G +     VH ++ +  T +    GPV+GL       F+ +   R + + N +TRE
Sbjct: 82  ---QGVSPEQKIVHQLQRV--TDFMSIAGPVDGLFLVEKAAFFDEDDAR-LALWNPATRE 135

Query: 179 VTPRIESKSFSELRKKSRKRLHFPLASLALGYDPATKEHKVVGIWSF 39
             P +   SF     K            ALG+DP T+++KV+ I +F
Sbjct: 136 FWP-LPPVSFEPQPFKDHDN------QFALGFDPLTRDYKVLCIRTF 175


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