BLASTX nr result

ID: Papaver30_contig00061745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00061745
         (453 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ72555.1| putative retroelement polyprotein [Malus domestica]     57   4e-06
gb|KHN23712.1| Retrovirus-related Pol polyprotein from transposo...    57   7e-06

>gb|AEJ72555.1| putative retroelement polyprotein [Malus domestica]
          Length = 1249

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = -3

Query: 448  KMKHVHLDCHFIRELVQSKALDIFYMSSIDQIANIFTKGLSAFRFSSLLRTSG*CSTLQF 269
            + KH+ +DCHF+RE  QS  +   ++ S DQ+A+IFTKGL   +F++LL   G  + L F
Sbjct: 1189 RTKHIEMDCHFVREKTQSDVIQHVFVRSTDQLADIFTKGLCRVQFNTLLVQLGLMNILAF 1248


>gb|KHN23712.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 246

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/49 (55%), Positives = 37/49 (75%)
 Frame = -3

Query: 451 SKMKHVHLDCHFIRELVQSKALDIFYMSSIDQIANIFTKGLSAFRFSSL 305
           ++ KH+ LD HFIR+LV SK L + Y+SS+DQ+A+IFTK LS  R + L
Sbjct: 183 TRSKHIALDFHFIRDLVDSKPLHVSYVSSVDQMADIFTKPLSKERMNLL 231


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