BLASTX nr result

ID: Papaver30_contig00060487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00060487
         (440 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KNA21365.1| hypothetical protein SOVF_043830 [Spinacia oleracea]    63   1e-07

>gb|KNA21365.1| hypothetical protein SOVF_043830 [Spinacia oleracea]
          Length = 404

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
 Frame = +3

Query: 27  VLVCKLWYKSIIHPHFTSLHLLQS-CRNTNPDLIFDILNKYQGGEILQHATLSLNIGDVD 203
           + VCK WY  I  P+F  LHL Q+   N++  L+    +     E   H    L+  D+D
Sbjct: 25  IFVCKSWYSLIKSPNFVKLHLNQTLISNSDRYLLLSYSSVNSSDEENLHN--HLDFSDID 82

Query: 204 DDDNNLVYCFRKLTHASTILKQDLVGHCNGLVCLRSSQVRSSASFFILNPSCR-----PK 368
            + N+LV  F  L H     + +L+G CNG+VC+     +S+  FF+ NP  +     P 
Sbjct: 83  LNHNHLV--FWDLDHPLKHHEVNLIGSCNGVVCISD---KSNTDFFLFNPLTKSQRKLPP 137

Query: 369 DHLGTFYPIPDEAFIVCCGFGFDS 440
           +++G   P+ +E  +   GFG+DS
Sbjct: 138 NNIGP-NPLNNETLVF--GFGYDS 158


Top