BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00056473
         (791 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   179   9e-43
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   176   4e-42
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   176   6e-42
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        169   2e-40
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892...   168   3e-40
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   171   3e-40
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     171   3e-40
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   171   5e-40
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     170   6e-40
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot...   168   6e-40
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905...   168   1e-39
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   169   2e-39
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   169   2e-39
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]         168   2e-39
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   169   3e-39
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     167   4e-39
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   168   5e-39
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     168   5e-39
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           166   1e-38
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   165   2e-38

>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  179 bits (455), Expect(2) = 9e-43
 Identities = 106/235 (45%), Positives = 143/235 (60%), Gaps = 12/235 (5%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLML-SSGVVDYQVEPSRD 614
            KLEPRA K IFLGY  GVKGY+LWCPE  K V+SR+V F ES+ML      +  VE    
Sbjct: 881  KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEK 940

Query: 613  GGSQVFE-IDTQHDSINEEMQQNTFIDEEVTNEVN--LEQQEEQPLIARDRPRRAIVNPA 443
               QV   I + H    E++  N   DE V  + N  + QQ  +  IA+DRP+R I  P 
Sbjct: 941  ASVQVEHLISSGHAPEKEDVAINQ--DEPVIEDSNSSIVQQSPKRSIAKDRPKRNIKPPQ 998

Query: 442  RF---QDTVVFALTMFDE-----APSSFKEALKDPHVEDWKLAMEEEMQSFRKNQTWELV 287
            R+    + V +AL++ +E      PS++ EA+       W  AM +EM+S  KN TWELV
Sbjct: 999  RYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELV 1058

Query: 286  PLPKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFSPVV 122
             LPK K  I  KW+F +K+G+S S +  RYKARL+AKGY+Q+ G+D++++FSPVV
Sbjct: 1059 KLPKEKKPIRCKWIFKRKEGIS-SSDEARYKARLIAKGYSQIPGIDFNDVFSPVV 1112



 Score = 22.3 bits (46), Expect(2) = 9e-43
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 122  KHTSIRVLLAMVVM 81
            KH+SIR LL++V M
Sbjct: 1113 KHSSIRTLLSIVAM 1126


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  176 bits (445), Expect(2) = 4e-42
 Identities = 107/243 (44%), Positives = 140/243 (57%), Gaps = 20/243 (8%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPE--LGKFVVSRDVTFDESLMLSSGVV--DYQVEP 623
            KLEPRA K IFLGY  GVKGYRLWC E    KF++SRDVTFDES M        D     
Sbjct: 773  KLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAMFGQRKEFGDLAGTS 832

Query: 622  SRDGGSQV---FEIDT-QHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDRPRRAI 455
              D G+     FE+D    + +++  ++   ID           Q +   IA  RPRR I
Sbjct: 833  KTDLGANQKVEFEVDAPMENGVDDTSEEQPVID-----------QNDSQSIAAHRPRREI 881

Query: 454  VNPARFQDTV--------VFALTMFDEA----PSSFKEALKDPHVEDWKLAMEEEMQSFR 311
              P R+ D V         FAL + +E     P S+KEA++    + W  +M++EM S R
Sbjct: 882  RRPMRYVDCVSANITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLR 941

Query: 310  KNQTWELVPLPKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFS 131
            KNQTWELVPLP+G   +  KW+F  KDG+S  +   +YK+RLVAKG++Q EG+DY+E+FS
Sbjct: 942  KNQTWELVPLPEGVKPVDCKWLFKIKDGISXDE-PPKYKSRLVAKGFSQKEGIDYNEVFS 1000

Query: 130  PVV 122
            PVV
Sbjct: 1001 PVV 1003



 Score = 23.9 bits (50), Expect(2) = 4e-42
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -1

Query: 122  KHTSIRVLLAMV 87
            KH SIRVLLAMV
Sbjct: 1004 KHKSIRVLLAMV 1015


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  176 bits (445), Expect(2) = 6e-42
 Identities = 102/234 (43%), Positives = 144/234 (61%), Gaps = 11/234 (4%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLMLSSGVVDYQVEPSRDG 611
            KLEPRAKKG+F+GY  GVKG+R+W P   + ++SR+V FDES +L + V       +   
Sbjct: 652  KLEPRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSL 711

Query: 610  GSQV-FEIDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPL---IARDRPRRAIVNPA 443
              QV F++      + E  ++    D+E   E ++ +     +   IA+DRPRR  V P 
Sbjct: 712  DKQVEFQVIQNESDLKEPEEE----DQEPQTETDIPESMPSDIHQSIAQDRPRRVGVRPP 767

Query: 442  R---FQDTVVFALTMFDEA----PSSFKEALKDPHVEDWKLAMEEEMQSFRKNQTWELVP 284
                F+D V +AL + +E     PS++KEA+     E W  AM +EM+S  KNQTW+LV 
Sbjct: 768  TRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVI 827

Query: 283  LPKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFSPVV 122
             P G+  I  KWVF KK+G+S ++ GV+YKAR+VA+G+ Q EGVDY+EIFSPVV
Sbjct: 828  QPSGRKIITCKWVFKKKEGISPAE-GVKYKARVVARGFNQREGVDYNEIFSPVV 880



 Score = 23.5 bits (49), Expect(2) = 6e-42
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = -1

Query: 122 KHTSIRVLLAMV 87
           +HTSIRVLLA+V
Sbjct: 881 RHTSIRVLLAIV 892


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  169 bits (428), Expect(2) = 2e-40
 Identities = 96/242 (39%), Positives = 140/242 (57%), Gaps = 19/242 (7%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLML------SSGVVDYQV 629
            KLE RA KG+F+GY  GVKGY++WC + GK +VSRDV F ES++L       +G+ D   
Sbjct: 664  KLEARALKGVFVGYPDGVKGYKIWCKDQGKCIVSRDVVFHESVLLKESAEHDAGLQDNPA 723

Query: 628  EPSRDGGSQVFEIDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQP-------LIARDR 470
               R  GS+  +++ +  +     ++    DE  T E    +  E P        +ARDR
Sbjct: 724  ANKR-SGSETSKVNVELLTDKSSEKEAASDDERATAESEEHEVSELPQADLQNYQLARDR 782

Query: 469  PRRAIVNPAR--FQDTVVFALTMFDEA----PSSFKEALKDPHVEDWKLAMEEEMQSFRK 308
             RR +  P R  + D + +AL   DE     P++F EA++  H + W  AM++EM+S ++
Sbjct: 783  VRREVRAPVRYGYADLIAYALLCADEVTIEEPANFSEAMESVHCDKWLEAMQDEMESLQR 842

Query: 307  NQTWELVPLPKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFSP 128
            NQTW L+P P  K  I  KW+F + +G+       +YKARLVA+G+ Q EGVD++EIFSP
Sbjct: 843  NQTWTLIPNPGNKRLINCKWIFKRNEGIP-DVEPPKYKARLVARGFTQREGVDFNEIFSP 901

Query: 127  VV 122
            VV
Sbjct: 902  VV 903



 Score = 25.0 bits (53), Expect(2) = 2e-40
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = -1

Query: 122 KHTSIRVLLAMVVM 81
           KH+SIR+LLAMV +
Sbjct: 904 KHSSIRILLAMVAL 917


>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
            vulgaris]
          Length = 1947

 Score =  168 bits (426), Expect(2) = 3e-40
 Identities = 104/254 (40%), Positives = 150/254 (59%), Gaps = 31/254 (12%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLM-LSSGVVDYQVEPSRD 614
            KLEPRAKKG FLGY  GVKGYR+W P  G+ ++SRDVTFDE+ M +S+       + S D
Sbjct: 741  KLEPRAKKGCFLGYGDGVKGYRIWSPSEGRVILSRDVTFDENTMFVSANKPAGDTDESTD 800

Query: 613  GGSQVF-------EIDTQ----HDSINEEMQQNTFIDEEVTNE-VNLEQQEEQPLI-ARD 473
             GS+         ++ TQ       ++  + + +  D  V +E  ++E   E+ ++  + 
Sbjct: 801  EGSEQVVAPDPTPQVRTQGKDNEAPVSSPIVETSQRDVAVVDETADVESDHEETVVEGQK 860

Query: 472  RPRRAIVN----------PAR---FQDTVVFALTMFDE----APSSFKEALKDPHVEDWK 344
            RPR+              P R    ++ + +AL + ++     P S+KEA+       W 
Sbjct: 861  RPRKKTQRLIEQIEGRNVPGRNCCVEEMIGYALHVAEDIESPEPMSYKEAVSSNESAKWL 920

Query: 343  LAMEEEMQSFRKNQTWELVPLPKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQ 164
            +AM EEM+S  KNQTWELV +P+G+  +G KWVF +K+G S  ++ VRYKARLVAKG++Q
Sbjct: 921  VAMSEEMESLHKNQTWELVRIPQGRKVVGCKWVFKRKEGTSEGES-VRYKARLVAKGFSQ 979

Query: 163  LEGVDYHEIFSPVV 122
             EGVDY+EIFSPVV
Sbjct: 980  REGVDYNEIFSPVV 993



 Score = 25.0 bits (53), Expect(2) = 3e-40
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 122  KHTSIRVLLAMV 87
            +HTSIRVLLAMV
Sbjct: 994  RHTSIRVLLAMV 1005


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  171 bits (434), Expect(2) = 3e-40
 Identities = 98/233 (42%), Positives = 140/233 (60%), Gaps = 10/233 (4%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLML-SSGVVDYQVEPSRD 614
            KLEPRA K IFLGY  GVKGY+LWCPE  K V+SR+V F ES++L      +  VE    
Sbjct: 709  KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEK 768

Query: 613  GGSQVFE-IDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDRPRRAIVNPARF 437
               QV   I + H    E +  N        ++ ++ QQ  +  IA+D+P+R I  P R+
Sbjct: 769  ASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRNIKPPRRY 828

Query: 436  ---QDTVVFALTMFDE-----APSSFKEALKDPHVEDWKLAMEEEMQSFRKNQTWELVPL 281
                + V +AL++ +E      PS++ EA+       W  AM +EM+S +KN TWE V L
Sbjct: 829  IEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKL 888

Query: 280  PKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFSPVV 122
            PK K  I  KW+F +K+G+S S +  RYKARLVAKGY+Q+ G+D++++FSP++
Sbjct: 889  PKEKKPIRCKWIFKRKEGMSPS-DEARYKARLVAKGYSQIPGIDFNDVFSPIM 940



 Score = 21.9 bits (45), Expect(2) = 3e-40
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 122 KHTSIRVLLAMVVM 81
           KH+SIR LL +V M
Sbjct: 941 KHSSIRTLLGIVAM 954


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  171 bits (434), Expect(2) = 3e-40
 Identities = 98/233 (42%), Positives = 140/233 (60%), Gaps = 10/233 (4%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLML-SSGVVDYQVEPSRD 614
            KLEPRA K IFLGY  GVKGY+LWCPE  K V+SR+V F ES++L      +  VE    
Sbjct: 709  KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEK 768

Query: 613  GGSQVFE-IDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDRPRRAIVNPARF 437
               QV   I + H    E +  N        ++ ++ QQ  +  IA+D+P+R I  P R+
Sbjct: 769  ASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRNIKPPRRY 828

Query: 436  ---QDTVVFALTMFDE-----APSSFKEALKDPHVEDWKLAMEEEMQSFRKNQTWELVPL 281
                + V +AL++ +E      PS++ EA+       W  AM +EM+S +KN TWE V L
Sbjct: 829  IEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKL 888

Query: 280  PKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFSPVV 122
            PK K  I  KW+F +K+G+S S +  RYKARLVAKGY+Q+ G+D++++FSP++
Sbjct: 889  PKEKKPIRCKWIFKRKEGMSPS-DEARYKARLVAKGYSQIPGIDFNDVFSPIM 940



 Score = 21.9 bits (45), Expect(2) = 3e-40
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 122 KHTSIRVLLAMVVM 81
           KH+SIR LL +V M
Sbjct: 941 KHSSIRTLLGIVAM 954


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  171 bits (433), Expect(2) = 5e-40
 Identities = 100/237 (42%), Positives = 142/237 (59%), Gaps = 14/237 (5%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGK--FVVSRDVTFDESLMLSSGVVDYQVEPSR 617
            KLEPRA K IFLGY +GVKGY+LW    GK   ++SRDVTF+E  M           P++
Sbjct: 632  KLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISRDVTFNEQDMSKQ-------TPAK 684

Query: 616  D-GGSQVFEIDTQHDSINEEMQQNTF---IDEEVTNEVNLEQQE--EQPLIARDRPRRAI 455
            D  G    + + +H+++  E  + T      EE+ +E   E  +  E   + RDR +R +
Sbjct: 685  DVEGLDQLQFEVEHETLQPEKSKETSSKTAQEEIVHERQNEPTQGLESYNLVRDRQKRQV 744

Query: 454  VNPARF--QDTVVFALTMFDEA----PSSFKEALKDPHVEDWKLAMEEEMQSFRKNQTWE 293
              P R+   +   FAL++ +E     P +++EA+     + W  A++EEM S RKN+TWE
Sbjct: 745  KPPKRYGQAEMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKNETWE 804

Query: 292  LVPLPKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFSPVV 122
            LV  PK +  +G+KWVF +K G  G++   RYKARLVAKG++Q EGVDY+EIFSPVV
Sbjct: 805  LVTKPKDRKVVGSKWVFKRKQGTLGNE-APRYKARLVAKGFSQKEGVDYNEIFSPVV 860



 Score = 21.6 bits (44), Expect(2) = 5e-40
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 122 KHTSIRVLLAMV 87
           KH+SIR+LLA V
Sbjct: 861 KHSSIRLLLAFV 872


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  170 bits (431), Expect(2) = 6e-40
 Identities = 99/233 (42%), Positives = 140/233 (60%), Gaps = 10/233 (4%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLML-SSGVVDYQVEPSRD 614
            KLEPRA K IFLGY  GVKGY+LWCPE  K V+SR+V F ES++L      +  VE    
Sbjct: 646  KLEPRAIKCIFLGYASGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEK 705

Query: 613  GGSQVFE-IDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDRPRRAIVNPARF 437
               QV   I + H    E++  N        ++ ++  Q  +  IA+D+P+R I  P R+
Sbjct: 706  ASVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVHQSPKRSIAKDKPKRNIKPPRRY 765

Query: 436  QD---TVVFALTMFDE-----APSSFKEALKDPHVEDWKLAMEEEMQSFRKNQTWELVPL 281
             +    V +AL++ ++      PS++ EA+       W  AM +EM+S  KN TWELV L
Sbjct: 766  IEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKL 825

Query: 280  PKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFSPVV 122
            PK K  I  KW+F +K+G+S S +  RYKARLVAKGY+Q+ G+D++++FSPVV
Sbjct: 826  PKEKKPIRCKWIFKRKEGMSPS-DEARYKARLVAKGYSQIPGIDFNDVFSPVV 877



 Score = 21.9 bits (45), Expect(2) = 6e-40
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 122 KHTSIRVLLAMVVM 81
           KH+SIR LL +V M
Sbjct: 878 KHSSIRTLLGIVAM 891


>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
            (strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
            unnamed protein product [Arabidopsis thaliana]
          Length = 1084

 Score =  168 bits (426), Expect(2) = 6e-40
 Identities = 105/247 (42%), Positives = 138/247 (55%), Gaps = 25/247 (10%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLMLSSG-----VVDYQVE 626
            KL+PRA KGIF+GY  G KGY++W  E  K V+SR+V F E L+         VV+ + E
Sbjct: 589  KLKPRALKGIFIGYPSGTKGYKIWLLEEQKCVISRNVLFHEELVYKDTIEKERVVESEAE 648

Query: 625  PSRDGGSQVFEIDTQHD-------SINEEMQQNTFIDEEVTNEVNLEQQEEQPL------ 485
            P+    S + ++ T  +        +++E + +  +DEE   E  +E  E Q        
Sbjct: 649  PASHSKSTLIKMKTPGNLNSGGVIQVSDEEESDESVDEEQEPEPQVELPETQTTSSLANY 708

Query: 484  -IARDRPRRAIVNPARFQDT--VVFAL----TMFDEAPSSFKEALKDPHVEDWKLAMEEE 326
             + RDR RR I  PARF +   V FAL    T+  E P S++EA  D   + WKLA  EE
Sbjct: 709  QLVRDRERRQIHPPARFTEESGVAFALVTVETLSMEEPQSYQEATSDKEWKKWKLATHEE 768

Query: 325  MQSFRKNQTWELVPLPKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDY 146
              S  KN TW LV  PK +  IG +W+F  K G+ G +  VRYKARLVAKGY Q EGVDY
Sbjct: 769  KNSLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVE-PVRYKARLVAKGYTQREGVDY 827

Query: 145  HEIFSPV 125
             EIF+PV
Sbjct: 828  QEIFAPV 834



 Score = 23.9 bits (50), Expect(2) = 6e-40
 Identities = 9/13 (69%), Positives = 13/13 (100%)
 Frame = -1

Query: 122 KHTSIRVLLAMVV 84
           KHTSIR+L+++VV
Sbjct: 836 KHTSIRILMSVVV 848


>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
            vulgaris]
          Length = 2676

 Score =  168 bits (425), Expect(2) = 1e-39
 Identities = 96/233 (41%), Positives = 141/233 (60%), Gaps = 10/233 (4%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLMLSSGVVDYQVEPSRDG 611
            KLEPRA+K +F+GY  GVKGYR+WC +  + + SRDV FDES M++    + ++    D 
Sbjct: 536  KLEPRARKCVFIGYGLGVKGYRVWCEKSRRVITSRDVVFDESCMITP---EKELSICNDV 592

Query: 610  GSQVFEIDTQHDSINEEMQQNTFIDEEVTNEVNLEQ--QEEQPLIARDRPRRAIVNPARF 437
            GS        HD+  +   ++   D+ +T+E ++E   Q ++  +A +R RR I  P R+
Sbjct: 593  GSS-------HDTGEKVELESASQDDALTHERHVEASPQTQRKTLASERQRRQIKPPQRY 645

Query: 436  Q---DTVVFALTMFDEA-----PSSFKEALKDPHVEDWKLAMEEEMQSFRKNQTWELVPL 281
                D V +ALT+ +E      P S+KEA+  P    W +AM++EM+S  KN  WELV  
Sbjct: 646  VEECDYVQYALTVANEVETFDDPCSYKEAMSLPDSSKWLMAMKQEMESLHKNNIWELVVA 705

Query: 280  PKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFSPVV 122
            PK K  +G KWV+ +K+G   S  G  YKAR+VA+ + Q+EGVD+HE+F PVV
Sbjct: 706  PKKKKIVGCKWVYKRKEGTPDS-GGPIYKARVVARRFTQVEGVDFHEVFPPVV 757



 Score = 23.1 bits (48), Expect(2) = 1e-39
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -1

Query: 122 KHTSIRVLLAMVVM 81
           KH+SIRVLLA+  M
Sbjct: 758 KHSSIRVLLALEAM 771


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  169 bits (429), Expect = 2e-39
 Identities = 101/244 (41%), Positives = 144/244 (59%), Gaps = 21/244 (8%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLMLSSGVVDYQVEPSR-- 617
            KLEPRA K +FLGY  GVKGY+LW PE GK  +SR V F+ES+M ++ +    V      
Sbjct: 666  KLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPSEHVPEKELQ 725

Query: 616  -----------DGGSQVFEIDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDR 470
                       D G QV  +  Q D  N+    +   D + T  + L+ +EE P IA+ +
Sbjct: 726  RMHMQVEHVDDDTGVQVEPVHEQDDHNNDVADDDAHDDVQQTPPI-LQLEEELP-IAQRK 783

Query: 469  PRRAIVNPARFQDTV---VFALTMFDEA-----PSSFKEALKDPHVEDWKLAMEEEMQSF 314
             +R    P R  +      +AL+  ++      P+++KEA++    E+W  AM EEMQS 
Sbjct: 784  SKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSL 843

Query: 313  RKNQTWELVPLPKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIF 134
             KN TWE+VPLPK K +I  KW+F +K+G+S S+   +YKARLVA+GY+Q+ GVDY+++F
Sbjct: 844  EKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSE-PPKYKARLVARGYSQIPGVDYNDVF 902

Query: 133  SPVV 122
            SPVV
Sbjct: 903  SPVV 906


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  169 bits (429), Expect = 2e-39
 Identities = 101/244 (41%), Positives = 144/244 (59%), Gaps = 21/244 (8%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLMLSSGVVDYQVEPSR-- 617
            KLEPRA K +FLGY  GVKGY+LW PE GK  +SR V F+ES+M ++ +    V      
Sbjct: 666  KLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPSEHVPEKELQ 725

Query: 616  -----------DGGSQVFEIDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDR 470
                       D G QV  +  Q D  N+    +   D + T  + L+ +EE P IA+ +
Sbjct: 726  RMHMQVEHVDDDTGVQVEPVHEQDDHNNDVADDDAHDDVQQTPPI-LQLEEELP-IAQRK 783

Query: 469  PRRAIVNPARFQDTV---VFALTMFDEA-----PSSFKEALKDPHVEDWKLAMEEEMQSF 314
             +R    P R  +      +AL+  ++      P+++KEA++    E+W  AM EEMQS 
Sbjct: 784  SKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSL 843

Query: 313  RKNQTWELVPLPKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIF 134
             KN TWE+VPLPK K +I  KW+F +K+G+S S+   +YKARLVA+GY+Q+ GVDY+++F
Sbjct: 844  EKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSE-PPKYKARLVARGYSQIPGVDYNDVF 902

Query: 133  SPVV 122
            SPVV
Sbjct: 903  SPVV 906


>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score =  168 bits (426), Expect(2) = 2e-39
 Identities = 97/233 (41%), Positives = 137/233 (58%), Gaps = 10/233 (4%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLML-SSGVVDYQVEPSRD 614
            KLEPRA K IFLGY  G+KGY+LWCP+  K V+SR+V F ES+ML      +  VE    
Sbjct: 456  KLEPRAIKCIFLGYPSGMKGYKLWCPKTKKVVISRNVVFHESVMLHDKPSTNVPVESQEK 515

Query: 613  GGSQVFE-IDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDRPRRAIVNPARF 437
               QV   I + H    E +  N  +     ++ +  QQ  +  IA+D+P+R    P R+
Sbjct: 516  ASVQVEHLISSGHAPEKENVAINQDVPVIEDSDSSTVQQSPKRFIAKDKPKRNTKPPQRY 575

Query: 436  ---QDTVVFALTMFDE-----APSSFKEALKDPHVEDWKLAMEEEMQSFRKNQTWELVPL 281
                + V +AL++ ++      PS++ EA+       W  AM +EM+S  KN TWELV L
Sbjct: 576  IEEANIVAYALSVAEDIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKL 635

Query: 280  PKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFSPVV 122
            PK K  I  KW+F +K G+S S   + YKARLVAKGY+Q+ G+D++++FSPVV
Sbjct: 636  PKEKKPIRCKWIFKRKKGISPSDEAM-YKARLVAKGYSQIPGIDFNDVFSPVV 687



 Score = 22.3 bits (46), Expect(2) = 2e-39
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 122 KHTSIRVLLAMVVM 81
           KH+SIR LL++V M
Sbjct: 688 KHSSIRTLLSIVAM 701


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  169 bits (427), Expect = 3e-39
 Identities = 103/244 (42%), Positives = 147/244 (60%), Gaps = 21/244 (8%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLMLSSGV----------- 644
            KLEPRA K +FLGY  GVKGY+LW PE GK  +SR V F+ES+M ++ +           
Sbjct: 666  KLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPSEHVPEKELQ 725

Query: 643  -VDYQVEPSRD-GGSQVFEIDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDR 470
             +  QVE   D  G QV  +  Q D  N+    +   D + T  + L+ +EE P IA+ +
Sbjct: 726  RMHMQVEHVDDYTGVQVEPVHEQDDHNNDVADDDAHDDVQQTPPI-LQLEEELP-IAQRK 783

Query: 469  PRRAIVNPARFQDTV---VFALTMFDEA-----PSSFKEALKDPHVEDWKLAMEEEMQSF 314
             +R    P R  +      +AL+  ++      P+++KEA++    E+W  AM EEMQS 
Sbjct: 784  SKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSL 843

Query: 313  RKNQTWELVPLPKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIF 134
             KN TWE+VPLPK K +I  KW+F +K+G+S S+   +YKARLVA+GY+Q+ GVDY+++F
Sbjct: 844  EKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSE-PPKYKARLVARGYSQIPGVDYNDVF 902

Query: 133  SPVV 122
            SPVV
Sbjct: 903  SPVV 906


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  167 bits (423), Expect(2) = 4e-39
 Identities = 98/233 (42%), Positives = 138/233 (59%), Gaps = 10/233 (4%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLML-SSGVVDYQVEPSRD 614
            KLEPR  K IFLGY  GVKGY+LWCPE  K V+SR+V F ES+ML      +  VE    
Sbjct: 583  KLEPRVIKCIFLGYLSGVKGYKLWCPETKKVVISRNVVFHESIMLHDKPSTNVPVESQEK 642

Query: 613  GGSQVFE-IDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDRPRRAIVNPARF 437
               QV   I + H    E++  N        ++ ++ QQ  +  IA+DRP+R    P R+
Sbjct: 643  VSVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVQQSPKRSIAKDRPKRNTKPPRRY 702

Query: 436  ---QDTVVFALTMFDE-----APSSFKEALKDPHVEDWKLAMEEEMQSFRKNQTWELVPL 281
                + V +AL++ +E      PS++ +A+       W  AM +EM+S  KN +WEL  L
Sbjct: 703  IEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKL 762

Query: 280  PKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFSPVV 122
            PK K  I  KW+F +K+G+S S +  RYKARLVAKGY+Q+ G+D++++FSPVV
Sbjct: 763  PKEKKPIRCKWIFKRKEGMSPS-DEARYKARLVAKGYSQIPGIDFNDVFSPVV 814



 Score = 22.3 bits (46), Expect(2) = 4e-39
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 122 KHTSIRVLLAMVVM 81
           KH+SIR LL++V M
Sbjct: 815 KHSSIRTLLSIVAM 828


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  168 bits (425), Expect = 5e-39
 Identities = 100/212 (47%), Positives = 131/212 (61%), Gaps = 11/212 (5%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLMLS------SGVVDYQV 629
            KL+PRAKK +F+G+  GVKGYRLWC E  K ++SRDVTFDES ML       +     QV
Sbjct: 653  KLDPRAKKALFMGFSPGVKGYRLWCLEAKKTIISRDVTFDESAMLKKVNPEGADSTPQQV 712

Query: 628  EPSRDGGSQV-FE----IDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDRPR 464
            E +R    QV FE    I T++ + +  M +    +EEV  +   E Q++   IA  R R
Sbjct: 713  ECAR---KQVEFEPKVVIPTRNTTSDSAMAEEESDEEEVPTQ---ESQQQSAPIAVRRQR 766

Query: 463  RAIVNPARFQDTVVFALTMFDEAPSSFKEALKDPHVEDWKLAMEEEMQSFRKNQTWELVP 284
            R I  P+RF D V +AL + D+ PS++ EA+      +W  AMEEEMQS +KN+TW+L  
Sbjct: 767  RDIQKPSRFMDMVAYALPVVDDIPSTYPEAIMSSESGNWAGAMEEEMQSLKKNKTWKLAQ 826

Query: 283  LPKGKNSIGNKWVFTKKDGVSGSKNGVRYKAR 188
            LPKGK +IG KWVF KK+  S +K  VRYKAR
Sbjct: 827  LPKGKKAIGCKWVFAKKEEFS-NKEDVRYKAR 857


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  168 bits (425), Expect = 5e-39
 Identities = 99/233 (42%), Positives = 138/233 (59%), Gaps = 10/233 (4%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLML-SSGVVDYQVEPSRD 614
            KLEPRA K IFLGY  GVK Y+LWCP+  K V+SR+V F ES+ML      +  VE    
Sbjct: 553  KLEPRAIKCIFLGYPSGVKDYKLWCPKTKKVVISRNVVFHESVMLHDKPSTNVPVESQEK 612

Query: 613  GGSQVFE-IDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDRPRRAIVNPARF 437
               QV   I + H    E++  N        ++ +  QQ  +  IA+D+P+R I  P R+
Sbjct: 613  ASVQVEHLISSGHAPEKEDVAINQDASVIEDSDSSAVQQSPKRSIAKDKPKRNIKPPRRY 672

Query: 436  ---QDTVVFALTMFDE-----APSSFKEALKDPHVEDWKLAMEEEMQSFRKNQTWELVPL 281
                + V +AL++ +E      PS++ EA+       W  AM +EM+S  KN TWELV L
Sbjct: 673  IEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDGCNRWITAMHDEMESLEKNHTWELVKL 732

Query: 280  PKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFSPVV 122
            PK K  I  KW+F +K G+S S +  RYKARLVAKGY+Q+ G+D++++FSPV+
Sbjct: 733  PKEKKPIRCKWIFKRKKGMSPS-DEARYKARLVAKGYSQIPGIDFNDVFSPVL 784


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  166 bits (421), Expect = 1e-38
 Identities = 100/244 (40%), Positives = 141/244 (57%), Gaps = 21/244 (8%)
 Frame = -2

Query: 790  KLEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLMLSSGVVDYQVEPSR-- 617
            KLEPRA K +FLGY  GVKGY+LW PE GK  +SR V F+ES+M ++ +    V      
Sbjct: 668  KLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPSEHVPEKELQ 727

Query: 616  -----------DGGSQVFEIDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDR 470
                       D G QV  +D Q D  N+    +   D + T  +   Q EE   IA+ +
Sbjct: 728  RMHMQVEHVDDDTGVQVEPVDEQDDHNNDVADDDAHDDVQQTPPIL--QLEEDLSIAQRK 785

Query: 469  PRRAIVNPARFQDTV---VFALTMFDEA-----PSSFKEALKDPHVEDWKLAMEEEMQSF 314
             +R    P R  +      +AL+  ++      P+++KEA++    E+W  AM EEMQS 
Sbjct: 786  SKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSL 845

Query: 313  RKNQTWELVPLPKGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIF 134
             KN TWE+VPLPK K +I  KW+F +K+ +S S+   +YKARLVA+GY+Q+ GVDY+++F
Sbjct: 846  EKNSTWEVVPLPKKKKTISCKWIFKRKEALSLSE-PPKYKARLVARGYSQIPGVDYNDVF 904

Query: 133  SPVV 122
            SPVV
Sbjct: 905  SPVV 908


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  165 bits (418), Expect(2) = 2e-38
 Identities = 96/232 (41%), Positives = 137/232 (59%), Gaps = 10/232 (4%)
 Frame = -2

Query: 787  LEPRAKKGIFLGYQRGVKGYRLWCPELGKFVVSRDVTFDESLML-SSGVVDYQVEPSRDG 611
            +EPRA K IFLGY  GVKGY+LWCPE  K V+SR+V F ES++L      +  VE     
Sbjct: 417  IEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKT 476

Query: 610  GSQVFE-IDTQHDSINEEMQQNTFIDEEVTNEVNLEQQEEQPLIARDRPRRAIVNPARF- 437
              QV   I + H    E++  N        ++ ++  Q  +  IA+D+P+R I  P R+ 
Sbjct: 477  SVQVEHLISSGHAPEKEDVAINQDAPVIQDSDSSIVHQSPKRSIAKDKPKRNIKPPRRYI 536

Query: 436  --QDTVVFALTMFDE-----APSSFKEALKDPHVEDWKLAMEEEMQSFRKNQTWELVPLP 278
               + V +AL++ +E      PS + EA+       W   M +EM+S  KN TWELV LP
Sbjct: 537  EEANIVAYALSVAEEIEGNAEPSIYSEAIVSDDCNRWITTMHDEMESLEKNHTWELVKLP 596

Query: 277  KGKNSIGNKWVFTKKDGVSGSKNGVRYKARLVAKGYAQLEGVDYHEIFSPVV 122
            K K SI  KW+F +K+G+S S +  RYKARLVAKGY+Q+  +D++++FSP+V
Sbjct: 597  KEKKSIRCKWIFKRKEGMSPS-DEARYKARLVAKGYSQIPSIDFNDVFSPIV 647



 Score = 22.3 bits (46), Expect(2) = 2e-38
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 122 KHTSIRVLLAMVVM 81
           KH+SIR LL++V M
Sbjct: 648 KHSSIRTLLSIVAM 661