BLASTX nr result

ID: Papaver30_contig00056417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00056417
         (616 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010262913.1| PREDICTED: F-box protein At3g07870-like [Nel...    59   2e-06

>ref|XP_010262913.1| PREDICTED: F-box protein At3g07870-like [Nelumbo nucifera]
          Length = 368

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
 Frame = +1

Query: 4   CEFCLGYEPVGENYKSVCFGDYDDKYFCKILTLGEC--GR--DSWRNLVKPGFRFNKPFR 171
           C F L + P   +YK VC   +     C+IL+L  C  GR  D+WR++  P  R      
Sbjct: 148 CTFGLAFVPSTADYKVVCIFRHWYGIKCQILSLRGCFNGRCNDTWRDVNGPLSRLTPSTM 207

Query: 172 FVRNGVVFSNGVLYWISDGTEEPKTVKKTIYSIDLSTETLYTTKIPNDASQKVDFCNLVE 351
            V   ++ + G+L+W +D        +  I S+D S ET   T +P     K+   +L+E
Sbjct: 208 EV--PILVNGGILHWKTDS-------RSHILSLDCSNETFQRTPLP---KCKIINVHLLE 255

Query: 352 MGGLLCYYELNHVDKLLKLWVLKRNIDNQCEWVRERNIE 468
           MGG L +  + H    + +WVLK     +  W+++  I+
Sbjct: 256 MGGFLAFVNIKHT--RIDIWVLKDYSGKR--WIKQYYID 290


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