BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00056047
         (684 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polyme...    96   1e-32
ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polyme...    96   1e-32
ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polyme...    72   2e-31
ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polyme...    72   2e-31
ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polyme...    99   4e-31
ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polyme...    94   9e-28
ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polyme...    94   9e-28
ref|XP_009352548.1| PREDICTED: probable RNA-dependent RNA polyme...    87   2e-27
ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polyme...    80   2e-27
ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polyme...    80   2e-27
ref|XP_012076891.1| PREDICTED: probable RNA-dependent RNA polyme...    85   5e-27
ref|XP_012076892.1| PREDICTED: probable RNA-dependent RNA polyme...    85   5e-27
gb|KDP33811.1| hypothetical protein JCGZ_07382 [Jatropha curcas]       85   5e-27
ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prun...    82   6e-27
ref|XP_008242502.1| PREDICTED: probable RNA-dependent RNA polyme...    82   2e-26
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]    73   8e-26
ref|XP_010095361.1| putative RNA-dependent RNA polymerase 3 [Mor...    80   2e-25
ref|XP_010049627.1| PREDICTED: probable RNA-dependent RNA polyme...    66   3e-25
ref|XP_010049628.1| PREDICTED: probable RNA-dependent RNA polyme...    66   3e-25
ref|XP_010049629.1| PREDICTED: probable RNA-dependent RNA polyme...    66   3e-25

>ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana sylvestris]
          Length = 1023

 Score = 96.3 bits (238), Expect(3) = 1e-32
 Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
 Frame = -1

Query: 684  WLSLMDTRLTLDKSDAVKIKDVEGKLLH----------ATKSGKKVQIPLKLKPHINPHF 535
            WL+ MD  L L   DA  +  ++GK+LH          A KSGKKV IP  LK +  PH+
Sbjct: 799  WLAFMDRLLMLRDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHY 858

Query: 534  MRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQDV 355
            M +         +P S      YHS S+LG +YD V+S+ +  D  + E+ KLP F+ ++
Sbjct: 859  MER--------GNPFS------YHSTSILGQIYDYVDSYPDE-DLCITEISKLPCFDVEI 903

Query: 354  PEHCIAFWREQHNPYKTDMCRALNN 280
            P+ C   WRE++  YK DM  A+N+
Sbjct: 904  PDECTTLWRERYEEYKKDMTMAMNS 928



 Score = 55.5 bits (132), Expect(3) = 1e-32
 Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -2

Query: 263  NLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAK-HYGVKK 117
            N  ++KYK++LY APE  QS RK +DIF +ALA+YH+ YD A+  Y ++K
Sbjct: 938  NEVIKKYKKLLYGAPEFEQSVRKTEDIFNEALALYHVTYDNARITYSIEK 987



 Score = 36.2 bits (82), Expect(3) = 1e-32
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -3

Query: 121  KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREIL 8
            +KC F W+VAG ALC  +   Q    F    S+L++IL
Sbjct: 986  EKCGFAWKVAGSALCRIHAMYQKENAFPILPSILQDIL 1023


>ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana sylvestris]
          Length = 1021

 Score = 96.3 bits (238), Expect(3) = 1e-32
 Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
 Frame = -1

Query: 684  WLSLMDTRLTLDKSDAVKIKDVEGKLLH----------ATKSGKKVQIPLKLKPHINPHF 535
            WL+ MD  L L   DA  +  ++GK+LH          A KSGKKV IP  LK +  PH+
Sbjct: 797  WLAFMDRLLMLRDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHY 856

Query: 534  MRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQDV 355
            M +         +P S      YHS S+LG +YD V+S+ +  D  + E+ KLP F+ ++
Sbjct: 857  MER--------GNPFS------YHSTSILGQIYDYVDSYPDE-DLCITEISKLPCFDVEI 901

Query: 354  PEHCIAFWREQHNPYKTDMCRALNN 280
            P+ C   WRE++  YK DM  A+N+
Sbjct: 902  PDECTTLWRERYEEYKKDMTMAMNS 926



 Score = 55.5 bits (132), Expect(3) = 1e-32
 Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -2

Query: 263  NLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAK-HYGVKK 117
            N  ++KYK++LY APE  QS RK +DIF +ALA+YH+ YD A+  Y ++K
Sbjct: 936  NEVIKKYKKLLYGAPEFEQSVRKTEDIFNEALALYHVTYDNARITYSIEK 985



 Score = 36.2 bits (82), Expect(3) = 1e-32
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -3

Query: 121  KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREIL 8
            +KC F W+VAG ALC  +   Q    F    S+L++IL
Sbjct: 984  EKCGFAWKVAGSALCRIHAMYQKENAFPILPSILQDIL 1021


>ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nelumbo nucifera]
          Length = 1045

 Score = 71.6 bits (174), Expect(3) = 2e-31
 Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
 Frame = -1

Query: 684  WLSLMDTRLTLD----------KSDAVKIKDVEGKLLHATKSGKKVQIPLKLKPHINPHF 535
            WL+ MD  LTL           K   +++ D     L A K+G KV++P  L+    PHF
Sbjct: 823  WLAFMDRLLTLGDECSSEKECLKKKMLQLVDTYYDALDAPKNGIKVEVPKCLQAEKFPHF 882

Query: 534  MRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQDV 355
            M +                 N Y+S SVLGL+YDEV SF+++ +    EV KL  F+ +V
Sbjct: 883  MERM----------------NKYNSTSVLGLIYDEVNSFQKA-NLSSTEVWKLFCFDGEV 925

Query: 354  PEHCIAFWREQHNPYKTDMCRALNNVG-AKGQSADAEI 244
             E C+  W+  +N Y+ +M  A+   G AK  SA+  I
Sbjct: 926  AEACMEKWQMHYNEYRDEMKSAMELDGEAKNASANEVI 963



 Score = 57.4 bits (137), Expect(3) = 2e-31
 Identities = 26/49 (53%), Positives = 35/49 (71%)
 Frame = -2

Query: 263  NLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHYGVKK 117
            N  +QKYK++LY A    QS R  ++IF D+LAIYH+CYD A+  GV+K
Sbjct: 960  NEVIQKYKQLLYGAANFEQSSRTRQEIFEDSLAIYHVCYDYARTKGVEK 1008



 Score = 54.7 bits (130), Expect(3) = 2e-31
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = -3

Query: 127  G*KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 5
            G +KC F W+VAGEALC  Y   QDG + +CS+S+LRE+L+
Sbjct: 1005 GVEKCSFAWKVAGEALCMLYTIKQDGGSIICSQSILRELLS 1045


>ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Nelumbo nucifera]
          Length = 1022

 Score = 71.6 bits (174), Expect(3) = 2e-31
 Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
 Frame = -1

Query: 684  WLSLMDTRLTLD----------KSDAVKIKDVEGKLLHATKSGKKVQIPLKLKPHINPHF 535
            WL+ MD  LTL           K   +++ D     L A K+G KV++P  L+    PHF
Sbjct: 800  WLAFMDRLLTLGDECSSEKECLKKKMLQLVDTYYDALDAPKNGIKVEVPKCLQAEKFPHF 859

Query: 534  MRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQDV 355
            M +                 N Y+S SVLGL+YDEV SF+++ +    EV KL  F+ +V
Sbjct: 860  MERM----------------NKYNSTSVLGLIYDEVNSFQKA-NLSSTEVWKLFCFDGEV 902

Query: 354  PEHCIAFWREQHNPYKTDMCRALNNVG-AKGQSADAEI 244
             E C+  W+  +N Y+ +M  A+   G AK  SA+  I
Sbjct: 903  AEACMEKWQMHYNEYRDEMKSAMELDGEAKNASANEVI 940



 Score = 57.4 bits (137), Expect(3) = 2e-31
 Identities = 26/49 (53%), Positives = 35/49 (71%)
 Frame = -2

Query: 263  NLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHYGVKK 117
            N  +QKYK++LY A    QS R  ++IF D+LAIYH+CYD A+  GV+K
Sbjct: 937  NEVIQKYKQLLYGAANFEQSSRTRQEIFEDSLAIYHVCYDYARTKGVEK 985



 Score = 54.7 bits (130), Expect(3) = 2e-31
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = -3

Query: 127  G*KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 5
            G +KC F W+VAGEALC  Y   QDG + +CS+S+LRE+L+
Sbjct: 982  GVEKCSFAWKVAGEALCMLYTIKQDGGSIICSQSILRELLS 1022


>ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Solanum
            lycopersicum] gi|723706114|ref|XP_010322171.1| PREDICTED:
            probable RNA-dependent RNA polymerase 3 [Solanum
            lycopersicum]
          Length = 1014

 Score = 98.6 bits (244), Expect(3) = 4e-31
 Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
 Frame = -1

Query: 684  WLSLMDTRLTLDKSDAVKIKDVEGKLLH----------ATKSGKKVQIPLKLKPHINPHF 535
            WL+ MD  LTL   +   +  ++GK+LH          A KSGKKV IP  LK +  PH+
Sbjct: 790  WLAFMDRLLTLRDDNVDDMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHYLKANKFPHY 849

Query: 534  MRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQDV 355
            M K +S                YHS S+LG +YD V+S+ +  D  + E+ KLP FE ++
Sbjct: 850  MEKGNSCS--------------YHSTSILGQIYDHVDSYPDE-DLCITEISKLPCFEVEI 894

Query: 354  PEHCIAFWREQHNPYKTDMCRALN 283
            P+ C+  WR ++  YK DM RA+N
Sbjct: 895  PQRCMTLWRGRYEEYKKDMTRAMN 918



 Score = 50.1 bits (118), Expect(3) = 4e-31
 Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = -2

Query: 263  NLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAK-HYGVKK 117
            N  ++KYK +LY A E  Q+ RK +DIF +ALAIYH+ YD A+  Y ++K
Sbjct: 929  NEVIKKYKMLLYGAVEFEQTVRKTEDIFDEALAIYHVTYDNARITYSIEK 978



 Score = 34.3 bits (77), Expect(3) = 4e-31
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -3

Query: 121  KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREIL 8
            +KC F W+VAG ALC  +   +  +      SVL+EIL
Sbjct: 977  EKCGFAWKVAGSALCRIHAMYRKEKDLPILPSVLQEIL 1014


>ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1020

 Score = 94.4 bits (233), Expect(2) = 9e-28
 Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
 Frame = -1

Query: 684  WLSLMDTRLTLDKSDAVKIKDVEGKLLH----------ATKSGKKVQIPLKLKPHINPHF 535
            WL+ MD  L L   D   +  ++GK+LH          A KSGKKV IP  LK +  PH+
Sbjct: 796  WLAFMDLLLMLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHY 855

Query: 534  MRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQDV 355
            M +         +P S      YHS S+LG +YD V+S+ +  D  + E+ KLP F+ ++
Sbjct: 856  MER--------GNPFS------YHSTSILGQIYDYVDSYPDE-DLCITEISKLPCFDVEI 900

Query: 354  PEHCIAFWREQHNPYKTDMCRALNN 280
            P+ C+A W E++  YK DM  A+N+
Sbjct: 901  PDECMALWGERYEEYKKDMTMAMNS 925



 Score = 57.0 bits (136), Expect(2) = 9e-28
 Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -2

Query: 263  NLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAK-HYGVKK 117
            N  ++KYK++LY APE  QS RK KDIF +ALA+YH+ YD A+  Y ++K
Sbjct: 935  NEVIKKYKKLLYGAPEFEQSVRKTKDIFNEALALYHVTYDNARITYSIEK 984


>ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1018

 Score = 94.4 bits (233), Expect(2) = 9e-28
 Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
 Frame = -1

Query: 684  WLSLMDTRLTLDKSDAVKIKDVEGKLLH----------ATKSGKKVQIPLKLKPHINPHF 535
            WL+ MD  L L   D   +  ++GK+LH          A KSGKKV IP  LK +  PH+
Sbjct: 794  WLAFMDLLLMLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHY 853

Query: 534  MRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQDV 355
            M +         +P S      YHS S+LG +YD V+S+ +  D  + E+ KLP F+ ++
Sbjct: 854  MER--------GNPFS------YHSTSILGQIYDYVDSYPDE-DLCITEISKLPCFDVEI 898

Query: 354  PEHCIAFWREQHNPYKTDMCRALNN 280
            P+ C+A W E++  YK DM  A+N+
Sbjct: 899  PDECMALWGERYEEYKKDMTMAMNS 923



 Score = 57.0 bits (136), Expect(2) = 9e-28
 Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -2

Query: 263  NLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAK-HYGVKK 117
            N  ++KYK++LY APE  QS RK KDIF +ALA+YH+ YD A+  Y ++K
Sbjct: 933  NEVIKKYKKLLYGAPEFEQSVRKTKDIFNEALALYHVTYDNARITYSIEK 982


>ref|XP_009352548.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Pyrus x
            bretschneideri]
          Length = 1088

 Score = 86.7 bits (213), Expect(3) = 2e-27
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
 Frame = -1

Query: 684  WLSLMDTRLT---------LDKSDAVKIKDVEGKLLHATKSGKKVQIPLKLKPHINPHFM 532
            WL++MD  LT         L K++ +++ D+    L A K G KV++P  LK    PH+M
Sbjct: 866  WLAMMDRYLTRGDSSIDENLVKANILRLVDIYYDALDAPKKGGKVEVPKDLKVSKFPHYM 925

Query: 531  RKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQDVP 352
             KK+S                Y S S+LG +YD V  ++   D    EV KLP F+ +VP
Sbjct: 926  EKKNS----------------YPSTSILGSIYDTVNEYQPD-DLSTREVKKLPIFDVEVP 968

Query: 351  EHCIAFWREQHNPYKTDMCRALNNVGAKGQSADA 250
            E C+  WREQ+  Y+ DM  AL +   +G++  A
Sbjct: 969  EECLIKWREQYKQYRCDMTSALRDGDQEGKNQAA 1002



 Score = 47.4 bits (111), Expect(3) = 2e-27
 Identities = 20/44 (45%), Positives = 31/44 (70%)
 Frame = -2

Query: 248  KYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHYGVKK 117
            KY+E+LY   + ++S R   +IF +A+AIY++CYD A+  GV K
Sbjct: 1008 KYREILYGGDDFDKSTRPMGEIFDEAIAIYNVCYDYARSAGVSK 1051



 Score = 36.2 bits (82), Expect(3) = 2e-27
 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -3

Query: 127  G*KKCYFVWRVAGEALCE-YYLGMQDGRTFVCSESVLREIL 8
            G  KC F W+VAG AL + +++   D   F+ S SVL+EIL
Sbjct: 1048 GVSKCGFAWKVAGSALFKLHFIKQGDACPFLVSPSVLKEIL 1088


>ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Vitis
            vinifera]
          Length = 954

 Score = 80.5 bits (197), Expect(3) = 2e-27
 Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 11/158 (6%)
 Frame = -1

Query: 684  WLSLMDTRLTL-----DKSDAVKIK-----DVEGKLLHATKSGKKVQIPLKLKPHINPHF 535
            WL  MD  LTL     D+ + +K K     D+    L A KSG KV +  +LK    PHF
Sbjct: 730  WLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHF 789

Query: 534  MRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQD- 358
            M ++SS                YHS S+LG +YD VESF+   +Q   E+ +LP F  D 
Sbjct: 790  MGRESS----------------YHSTSILGQIYDAVESFQPE-NQSTKEIWRLPLFNIDA 832

Query: 357  VPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSADAEI 244
            VP+ C+  W+++++ Y+++M  AL + G       AE+
Sbjct: 833  VPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEV 870



 Score = 48.1 bits (113), Expect(3) = 2e-27
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = -2

Query: 254 MQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYD 144
           + KYK++LY A E  +SPR  +DIF +ALAIYH+ Y+
Sbjct: 871 INKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYE 907



 Score = 41.6 bits (96), Expect(3) = 2e-27
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = -3

Query: 115  CYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 5
            C F WRVAG ALC+ Y      ++ VC  SVLR++ N
Sbjct: 918  CNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLRQVFN 954


>ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Vitis
            vinifera] gi|297738765|emb|CBI28010.3| unnamed protein
            product [Vitis vinifera]
          Length = 929

 Score = 80.5 bits (197), Expect(3) = 2e-27
 Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 11/158 (6%)
 Frame = -1

Query: 684  WLSLMDTRLTL-----DKSDAVKIK-----DVEGKLLHATKSGKKVQIPLKLKPHINPHF 535
            WL  MD  LTL     D+ + +K K     D+    L A KSG KV +  +LK    PHF
Sbjct: 705  WLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHF 764

Query: 534  MRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQD- 358
            M ++SS                YHS S+LG +YD VESF+   +Q   E+ +LP F  D 
Sbjct: 765  MGRESS----------------YHSTSILGQIYDAVESFQPE-NQSTKEIWRLPLFNIDA 807

Query: 357  VPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSADAEI 244
            VP+ C+  W+++++ Y+++M  AL + G       AE+
Sbjct: 808  VPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEV 845



 Score = 48.1 bits (113), Expect(3) = 2e-27
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = -2

Query: 254 MQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYD 144
           + KYK++LY A E  +SPR  +DIF +ALAIYH+ Y+
Sbjct: 846 INKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYE 882



 Score = 41.6 bits (96), Expect(3) = 2e-27
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = -3

Query: 115  CYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 5
            C F WRVAG ALC+ Y      ++ VC  SVLR++ N
Sbjct: 893  CNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLRQVFN 929


>ref|XP_012076891.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Jatropha curcas]
          Length = 1008

 Score = 85.1 bits (209), Expect(3) = 5e-27
 Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
 Frame = -1

Query: 684  WLSLMDTRLTLD----------KSDAVKIKDVEGKLLHATKSG-KKVQIPLKLKPHINPH 538
            W +LMD  LTL+          K + V++ D     L A K G KK+ IP +LK  + PH
Sbjct: 767  WSALMDRYLTLEDDRSDERDHMKRNMVELIDKYYDALDAPKKGGKKIFIPEELKAELFPH 826

Query: 537  FMRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQD 358
             M ++              K+  Y S S+LGL+YD+V+SFEE+ D   IEV KLPSF   
Sbjct: 827  HMERE--------------KEISYTSTSILGLIYDKVKSFEEA-DPPEIEVWKLPSFNDR 871

Query: 357  VPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSA 256
            V E C+  W+  HN Y+ +M  AL N   K ++A
Sbjct: 872  VSEPCLEKWKTLHNQYRQEMTIALKNKETKDKTA 905



 Score = 54.3 bits (129), Expect(3) = 5e-27
 Identities = 23/38 (60%), Positives = 30/38 (78%)
 Frame = -2

Query: 251  QKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEA 138
            +KYKE+LY+A E  +S RKE DIF +ALAIY +CY+ A
Sbjct: 910  KKYKEILYEAAEFEESKRKEDDIFEEALAIYEVCYNHA 947



 Score = 29.6 bits (65), Expect(3) = 5e-27
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -3

Query: 115  CYFVWRVAGEALCEYY 68
            C F W+VAG+ALC+ Y
Sbjct: 969  CGFAWKVAGQALCKLY 984


>ref|XP_012076892.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Jatropha curcas]
          Length = 1003

 Score = 85.1 bits (209), Expect(3) = 5e-27
 Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
 Frame = -1

Query: 684  WLSLMDTRLTLD----------KSDAVKIKDVEGKLLHATKSG-KKVQIPLKLKPHINPH 538
            W +LMD  LTL+          K + V++ D     L A K G KK+ IP +LK  + PH
Sbjct: 762  WSALMDRYLTLEDDRSDERDHMKRNMVELIDKYYDALDAPKKGGKKIFIPEELKAELFPH 821

Query: 537  FMRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQD 358
             M ++              K+  Y S S+LGL+YD+V+SFEE+ D   IEV KLPSF   
Sbjct: 822  HMERE--------------KEISYTSTSILGLIYDKVKSFEEA-DPPEIEVWKLPSFNDR 866

Query: 357  VPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSA 256
            V E C+  W+  HN Y+ +M  AL N   K ++A
Sbjct: 867  VSEPCLEKWKTLHNQYRQEMTIALKNKETKDKTA 900



 Score = 54.3 bits (129), Expect(3) = 5e-27
 Identities = 23/38 (60%), Positives = 30/38 (78%)
 Frame = -2

Query: 251  QKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEA 138
            +KYKE+LY+A E  +S RKE DIF +ALAIY +CY+ A
Sbjct: 905  KKYKEILYEAAEFEESKRKEDDIFEEALAIYEVCYNHA 942



 Score = 29.6 bits (65), Expect(3) = 5e-27
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -3

Query: 115  CYFVWRVAGEALCEYY 68
            C F W+VAG+ALC+ Y
Sbjct: 964  CGFAWKVAGQALCKLY 979


>gb|KDP33811.1| hypothetical protein JCGZ_07382 [Jatropha curcas]
          Length = 281

 Score = 85.1 bits (209), Expect(3) = 5e-27
 Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
 Frame = -1

Query: 684 WLSLMDTRLTLD----------KSDAVKIKDVEGKLLHATKSG-KKVQIPLKLKPHINPH 538
           W +LMD  LTL+          K + V++ D     L A K G KK+ IP +LK  + PH
Sbjct: 40  WSALMDRYLTLEDDRSDERDHMKRNMVELIDKYYDALDAPKKGGKKIFIPEELKAELFPH 99

Query: 537 FMRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQD 358
            M ++              K+  Y S S+LGL+YD+V+SFEE+ D   IEV KLPSF   
Sbjct: 100 HMERE--------------KEISYTSTSILGLIYDKVKSFEEA-DPPEIEVWKLPSFNDR 144

Query: 357 VPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSA 256
           V E C+  W+  HN Y+ +M  AL N   K ++A
Sbjct: 145 VSEPCLEKWKTLHNQYRQEMTIALKNKETKDKTA 178



 Score = 54.3 bits (129), Expect(3) = 5e-27
 Identities = 23/38 (60%), Positives = 30/38 (78%)
 Frame = -2

Query: 251 QKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEA 138
           +KYKE+LY+A E  +S RKE DIF +ALAIY +CY+ A
Sbjct: 183 KKYKEILYEAAEFEESKRKEDDIFEEALAIYEVCYNHA 220



 Score = 29.6 bits (65), Expect(3) = 5e-27
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -3

Query: 115 CYFVWRVAGEALCEYY 68
           C F W+VAG+ALC+ Y
Sbjct: 242 CGFAWKVAGQALCKLY 257


>ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
           gi|462399806|gb|EMJ05474.1| hypothetical protein
           PRUPE_ppa001584mg [Prunus persica]
          Length = 798

 Score = 82.0 bits (201), Expect(3) = 6e-27
 Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
 Frame = -1

Query: 684 WLSLMDTRLTLD----------KSDAVKIKDVEGKLLHATKSGKKVQIPLKLKPHINPHF 535
           WL++MD  L L           K++ +++ D+  + L A K G KV +P +LK ++ PH+
Sbjct: 574 WLAMMDRLLILGDSSNSEKTHVKANMLRLVDLYYEALDAPKKGGKVVVPGELKSNLFPHY 633

Query: 534 MRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQDV 355
           M + +S                Y S S+LGL+YD V +++   D  + EV KLP F+ +V
Sbjct: 634 MERVNS----------------YKSTSILGLIYDTVNAYQAE-DASIKEVKKLPMFDVEV 676

Query: 354 PEHCIAFWREQHNPYKTDMCRAL--NNVGAKGQSAD 253
           PE C+  WRE +  Y+++M  A+  ++  +K  +AD
Sbjct: 677 PEECLKKWREHYQHYRSEMSSAMQDDDRDSKNNAAD 712



 Score = 47.0 bits (110), Expect(3) = 6e-27
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -3

Query: 118 KCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREIL 8
           KC F W+VAG ALC+YY+  Q  RT   S SVL++++
Sbjct: 762 KCCFAWKVAGSALCKYYMNKQGARTIEASFSVLKDLV 798



 Score = 39.7 bits (91), Expect(3) = 6e-27
 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = -2

Query: 254 MQKYKEVLYQ-APELNQSPRKEKDIFMDALAIYHICYDEAKHYG 126
           ++KYKE+LY  A +L  S R   +IF +ALAIY + YD A   G
Sbjct: 715 LRKYKEILYGGAEDLENSTRPLHEIFDEALAIYRVTYDHAISQG 758


>ref|XP_008242502.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Prunus mume]
          Length = 1080

 Score = 82.4 bits (202), Expect(3) = 2e-26
 Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
 Frame = -1

Query: 684  WLSLMDTRLTLD----------KSDAVKIKDVEGKLLHATKSGKKVQIPLKLKPHINPHF 535
            WL+ MD  L L           K++ +++ D+  + L A K G KV IP +LK +  PH+
Sbjct: 856  WLAKMDRLLILGDSSNSEKARVKANMLRLVDLYYEALDAPKKGGKVVIPEELKSNQFPHY 915

Query: 534  MRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQDV 355
            M + +S                Y S S+LGL+YD V ++    D  + EV KLP F+ +V
Sbjct: 916  MERVNS----------------YKSTSILGLIYDTVNAYHVE-DASIKEVKKLPMFDVEV 958

Query: 354  PEHCIAFWREQHNPYKTDMCRAL--NNVGAKGQSAD 253
            PE C+  WRE H  Y+++M  A+  N+  +K  +AD
Sbjct: 959  PEECLRKWREHHQHYRSEMSSAMQDNDRDSKNNAAD 994



 Score = 46.6 bits (109), Expect(3) = 2e-26
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -3

Query: 118  KCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREIL 8
            KC F W+VAG ALC+YY+  Q  RT   S SVL++++
Sbjct: 1044 KCCFAWKVAGSALCKYYMNKQGARTIEVSFSVLKDLV 1080



 Score = 37.7 bits (86), Expect(3) = 2e-26
 Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -2

Query: 251  QKYKEVLYQ-APELNQSPRKEKDIFMDALAIYHICYDEAKHYG 126
            +KYKE+LY  A +L  S R   +IF  ALAIY + YD A   G
Sbjct: 998  RKYKEILYGGAEDLENSTRPLHEIFNAALAIYRVTYDHAISQG 1040


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score = 72.8 bits (177), Expect(3) = 8e-26
 Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
 Frame = -1

Query: 684  WLSLMDTRLTL-----DKSDAVKIK-----DVEGKLLHATKSGKKVQIPLKLKPHINPHF 535
            WL  MD  LTL     D+ + +K K     D+    L A KSG KV +  +LK    PHF
Sbjct: 988  WLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHF 1047

Query: 534  MRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEESGDQLLIEVDKLPSFEQDV 355
            M ++SS                YHS S+LG +YD VESF+              S +  V
Sbjct: 1048 MGRESS----------------YHSTSILGQIYDAVESFQPENQ----------STKDAV 1081

Query: 354  PEHCIAFWREQHNPYKTDMCRALNNVGAKGQSADAEI 244
            P+ C+  W+++++ Y+++M  AL + G       AE+
Sbjct: 1082 PQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEV 1118



 Score = 50.4 bits (119), Expect(3) = 8e-26
 Identities = 22/39 (56%), Positives = 30/39 (76%)
 Frame = -2

Query: 254  MQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEA 138
            + KYK++LY A E  +SPRK +DIF +ALAIYH+ Y+ A
Sbjct: 1119 INKYKQILYGAAEFEESPRKLEDIFDEALAIYHVTYEFA 1157



 Score = 41.6 bits (96), Expect(3) = 8e-26
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = -3

Query: 115  CYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 5
            C F WRVAG ALC+ Y      ++ VC  SVLR++ N
Sbjct: 1166 CNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLRQVFN 1202


>ref|XP_010095361.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
           gi|587870497|gb|EXB59780.1| putative RNA-dependent RNA
           polymerase 3 [Morus notabilis]
          Length = 521

 Score = 79.7 bits (195), Expect(3) = 2e-25
 Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 29/162 (17%)
 Frame = -1

Query: 684 WLSLMDTRLTLD----------KSDAVKIKDVEGKLLHATKSGKK--------------- 580
           WL+LMD  LTL           K +  ++ D+    L A K G K               
Sbjct: 279 WLALMDRFLTLGDDCVAEKNAVKDNLFELVDIYYDALDAPKQGGKQQDLAKFFEAYAALE 338

Query: 579 ----VQIPLKLKPHINPHFMRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFEE 412
               V++P +LKP+  PH+M K++S                +HS+S+LG +YDEV++++ 
Sbjct: 339 LSFQVEVPRELKPNRFPHYMEKQNS----------------FHSRSILGWIYDEVDAYQL 382

Query: 411 SGDQLLIEVDKLPSFEQDVPEHCIAFWREQHNPYKTDMCRAL 286
             D    E+ KLP FE +VPE C+  W+  +  Y+ DMC AL
Sbjct: 383 E-DHSNKEIFKLPHFEVEVPEACLTKWKAHYKDYRDDMCDAL 423



 Score = 50.1 bits (118), Expect(3) = 2e-25
 Identities = 21/38 (55%), Positives = 30/38 (78%)
 Frame = -2

Query: 251 QKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEA 138
           +KYK +LY A EL +S +K ++I+ +ALAIYH+CYD A
Sbjct: 439 RKYKRLLYGAEELEESTKKMEEIYNEALAIYHVCYDYA 476



 Score = 33.5 bits (75), Expect(3) = 2e-25
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 115 CYFVWRVAGEALCEYYLGMQDG-RTFVCSESVLREIL 8
           C F W +AG AL + +   + G R F C  SVL+E+L
Sbjct: 485 CSFAWNIAGSALLKLHAFKKIGERAFFCLPSVLKEVL 521


>ref|XP_010049627.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Eucalyptus grandis]
          Length = 993

 Score = 66.2 bits (160), Expect(3) = 3e-25
 Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
 Frame = -1

Query: 684  WLSLMDTRLTLDKSDAVKIKDVEGKL----------LHATK-SGKKVQIPLKLKPHINPH 538
            W +LMD  LTL      +   VE  L          + A K SG K+++P  LK    PH
Sbjct: 767  WQALMDRFLTLGSDQVDEKHRVERNLCQLIDIYYDAIDAPKNSGLKIEVPKSLKAETFPH 826

Query: 537  FMRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFE---ESGDQLLIEVDKLPSF 367
            +M K               K   +HS S+LG+++D+VES++    +G  +     KLP F
Sbjct: 827  YMGKD--------------KSMSFHSNSILGVIFDKVESYQADIPTGKGIW----KLPYF 868

Query: 366  EQDVPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSADAE 247
            + + P  C   W  ++  Y+++M  AL   GA+G+++ A+
Sbjct: 869  DVETPRDCRMEWERRYTEYRSEMVAALGE-GAEGKNSSAD 907



 Score = 52.4 bits (124), Expect(3) = 3e-25
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = -2

Query: 254  MQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHY 129
            + KYK++LY APE  +S RKE+DIF +ALAIY+I YD A  +
Sbjct: 910  INKYKQLLYGAPEFEESLRKEEDIFNEALAIYNITYDYAMRW 951



 Score = 44.3 bits (103), Expect(3) = 3e-25
 Identities = 20/38 (52%), Positives = 24/38 (63%)
 Frame = -3

Query: 118  KCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 5
            KC F WRVAG ALC  Y   Q+ +  VC  SVL+EI +
Sbjct: 956  KCGFAWRVAGPALCRIYAIKQEQKLIVCLPSVLKEIFS 993


>ref|XP_010049628.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Eucalyptus grandis]
          Length = 992

 Score = 66.2 bits (160), Expect(3) = 3e-25
 Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
 Frame = -1

Query: 684  WLSLMDTRLTLDKSDAVKIKDVEGKL----------LHATK-SGKKVQIPLKLKPHINPH 538
            W +LMD  LTL      +   VE  L          + A K SG K+++P  LK    PH
Sbjct: 766  WQALMDRFLTLGSDQVDEKHRVERNLCQLIDIYYDAIDAPKNSGLKIEVPKSLKAETFPH 825

Query: 537  FMRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFE---ESGDQLLIEVDKLPSF 367
            +M K               K   +HS S+LG+++D+VES++    +G  +     KLP F
Sbjct: 826  YMGKD--------------KSMSFHSNSILGVIFDKVESYQADIPTGKGIW----KLPYF 867

Query: 366  EQDVPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSADAE 247
            + + P  C   W  ++  Y+++M  AL   GA+G+++ A+
Sbjct: 868  DVETPRDCRMEWERRYTEYRSEMVAALGE-GAEGKNSSAD 906



 Score = 52.4 bits (124), Expect(3) = 3e-25
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = -2

Query: 254  MQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHY 129
            + KYK++LY APE  +S RKE+DIF +ALAIY+I YD A  +
Sbjct: 909  INKYKQLLYGAPEFEESLRKEEDIFNEALAIYNITYDYAMRW 950



 Score = 44.3 bits (103), Expect(3) = 3e-25
 Identities = 20/38 (52%), Positives = 24/38 (63%)
 Frame = -3

Query: 118  KCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 5
            KC F WRVAG ALC  Y   Q+ +  VC  SVL+EI +
Sbjct: 955  KCGFAWRVAGPALCRIYAIKQEQKLIVCLPSVLKEIFS 992


>ref|XP_010049629.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X3
            [Eucalyptus grandis]
          Length = 980

 Score = 66.2 bits (160), Expect(3) = 3e-25
 Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
 Frame = -1

Query: 684  WLSLMDTRLTLDKSDAVKIKDVEGKL----------LHATK-SGKKVQIPLKLKPHINPH 538
            W +LMD  LTL      +   VE  L          + A K SG K+++P  LK    PH
Sbjct: 754  WQALMDRFLTLGSDQVDEKHRVERNLCQLIDIYYDAIDAPKNSGLKIEVPKSLKAETFPH 813

Query: 537  FMRKKSSGPSGLNSPQSLRKDNYYHSKSVLGLLYDEVESFE---ESGDQLLIEVDKLPSF 367
            +M K               K   +HS S+LG+++D+VES++    +G  +     KLP F
Sbjct: 814  YMGKD--------------KSMSFHSNSILGVIFDKVESYQADIPTGKGIW----KLPYF 855

Query: 366  EQDVPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSADAE 247
            + + P  C   W  ++  Y+++M  AL   GA+G+++ A+
Sbjct: 856  DVETPRDCRMEWERRYTEYRSEMVAALGE-GAEGKNSSAD 894



 Score = 52.4 bits (124), Expect(3) = 3e-25
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = -2

Query: 254  MQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHY 129
            + KYK++LY APE  +S RKE+DIF +ALAIY+I YD A  +
Sbjct: 897  INKYKQLLYGAPEFEESLRKEEDIFNEALAIYNITYDYAMRW 938



 Score = 44.3 bits (103), Expect(3) = 3e-25
 Identities = 20/38 (52%), Positives = 24/38 (63%)
 Frame = -3

Query: 118  KCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 5
            KC F WRVAG ALC  Y   Q+ +  VC  SVL+EI +
Sbjct: 943  KCGFAWRVAGPALCRIYAIKQEQKLIVCLPSVLKEIFS 980