BLASTX nr result
ID: Papaver30_contig00056015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00056015
(2332 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_013745520.1| PREDICTED: uncharacterized protein LOC106448... 581 e-162
ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, part... 516 e-143
ref|XP_009151506.1| PREDICTED: serine/threonine-protein kinase T... 500 e-138
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun... 497 e-137
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 496 e-137
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 493 e-136
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun... 491 e-136
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 489 e-135
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 488 e-135
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia] 488 e-134
ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [The... 488 e-134
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The... 487 e-134
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 486 e-134
ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, part... 483 e-133
ref|XP_013689613.1| PREDICTED: uncharacterized protein LOC106393... 481 e-132
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 480 e-132
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 479 e-132
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 479 e-132
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 479 e-132
dbj|BAA89466.1| gag-pol polyprotein, partial [Oryza sativa Indic... 475 e-131
>ref|XP_013745520.1| PREDICTED: uncharacterized protein LOC106448142 [Brassica napus]
Length = 701
Score = 581 bits (1497), Expect = e-162
Identities = 288/491 (58%), Positives = 339/491 (69%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+++FYAI+Q +KHWRHYL H EFVLFTDH AL+++G QDK+++R W YLQ FT
Sbjct: 226 YSTYDVKFYAIVQAVKHWRHYLAHKEFVLFTDHVALRYLGTQDKISSRHASWTAYLQQFT 285
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNST 1973
FV+KH +G N+VAD V+G E A+LY TD F P L
Sbjct: 286 FVIKHPSGKLNKVADSLSRRHALVSTLRVSVVGFECLAELYPTDA-FSPRL--------- 335
Query: 1972 QFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEGHFGRDKTFQLVSTSYFWPRLFKEVQR 1793
RL+IIQELH EGH GRD+T +LV+ SY+WP L ++V+R
Sbjct: 336 ----------------------RLQIIQELHKEGHVGRDRTLKLVADSYYWPSLRRDVER 373
Query: 1792 FVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVVDRFS 1613
FV+RC CQ KG +NAGLY+PLPIP++PW+DISMDFV+GLPRTQ G DSIFVVVDRFS
Sbjct: 374 FVARCTTCQEGKGHVSNAGLYLPLPIPTQPWSDISMDFVLGLPRTQRGHDSIFVVVDRFS 433
Query: 1612 KMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLRTELK 1433
KM HFI CKKTTDAV VA LFF +YRLHGLP SIVSDRDS+F+SHFWRSLWKL +T L
Sbjct: 434 KMTHFIPCKKTTDAVQVASLFFWEIYRLHGLPTSIVSDRDSRFISHFWRSLWKLFKTSLN 493
Query: 1432 FGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGFSPFQ 1253
SAYHP TDGQTEVVNRSLGN+LR LVG + + WD L QAEFA N A + S G+SPF+
Sbjct: 494 MSSAYHPHTDGQTEVVNRSLGNMLRCLVGDNLRSWDTLLCQAEFAHNHAHNWSLGYSPFK 553
Query: 1252 VVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAADKHRR 1073
VV G PR PL LA P H A EL+ + +H A NL ++ KYK DK RR
Sbjct: 554 VVYGVVPRDPLALATTPQPGEFHGRAFELIEEITDLHTRAQDNLAGTAIKYKREVDKKRR 613
Query: 1072 HVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHTADVF 893
V F+VGD VWAVLIKERF TG Y KL PRKIGP E I KIN NAY+LRLP+HIHTADVF
Sbjct: 614 EVNFQVGDHVWAVLIKERFPTGRYKKLLPRKIGPVEFIAKINANAYKLRLPAHIHTADVF 673
Query: 892 NVRHLIPYHGD 860
NV+HL + D
Sbjct: 674 NVKHLFKFEPD 684
>ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, partial [Prunus persica]
gi|462403623|gb|EMJ09180.1| hypothetical protein
PRUPE_ppa015715mg, partial [Prunus persica]
Length = 1445
Score = 516 bits (1330), Expect = e-143
Identities = 251/499 (50%), Positives = 334/499 (66%), Gaps = 6/499 (1%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+ EFYA++Q L++W++YL+ +EFVL++DH ALK++ +Q +++R VKW+ YLQ FT
Sbjct: 841 YSTYDKEFYAVVQALRYWQYYLLPNEFVLYSDHQALKYLHSQRTISSRHVKWSEYLQIFT 900
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNST 1973
FVL+H+ G N+VAD +V G + Y + P FG I V GN
Sbjct: 901 FVLRHRPGIDNKVADALSRVATILHTMTVQVTGFDRIKTEYSSCPDFGIIFHEVSNGNRR 960
Query: 1972 Q---FSLLDGFLFKGTRLCIPDCSWRLRIIQELHN---EGHFGRDKTFQLVSTSYFWPRL 1811
+ F DGFLF+GT+LCIP S R ++ ELH GHFG+DKT LV ++WP L
Sbjct: 961 EYVDFITRDGFLFRGTQLCIPRTSLREFLVWELHGGGLAGHFGKDKTIALVEDRFYWPSL 1020
Query: 1810 FKEVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFV 1631
++V +S+C CQ++K N GLY PLPIP PW D+SMDFV+GLP+T G DSIFV
Sbjct: 1021 KRDVAHLISQCRTCQLAKARKRNTGLYTPLPIPHTPWKDLSMDFVLGLPKTSRGYDSIFV 1080
Query: 1630 VVDRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKL 1451
+VDRFSKMAHF+ C K TDA +VA LFF+ V RLHGLP SIVSDRD KF+S+FW++LWKL
Sbjct: 1081 IVDRFSKMAHFLPCAKNTDASYVAKLFFKEVVRLHGLPVSIVSDRDVKFVSYFWKTLWKL 1140
Query: 1450 LRTELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKST 1271
T LKF SA+HPQTDGQTEVVNRSLG++LR LVG WD+ L AEFA+N ++++ST
Sbjct: 1141 FGTTLKFSSAFHPQTDGQTEVVNRSLGDLLRCLVGDKPGNWDLLLPVAEFAYNNSVNRST 1200
Query: 1270 GFSPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTA 1091
G SPF+VV GF+PRSP+DL +P R +A H++Q+H + + + + YK A
Sbjct: 1201 GKSPFEVVHGFSPRSPVDLVALPVAARTSDSATSFAEHIRQLHDDVRRQISMHTDTYKLA 1260
Query: 1090 ADKHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHI 911
A+ HRR EF GDFV + ERF ++ KL R +GP+ II+K+ NAY + LP+ +
Sbjct: 1261 ANAHRRQQEFREGDFVMVRVCPERFPKHSFKKLHARSMGPYRIIKKLGSNAYLIELPADM 1320
Query: 910 HTADVFNVRHLIPYHGDLS 854
H + +FNV L PY G S
Sbjct: 1321 HISPIFNVSDLSPYRGTFS 1339
>ref|XP_009151506.1| PREDICTED: serine/threonine-protein kinase TIO-like, partial
[Brassica rapa]
Length = 1091
Score = 500 bits (1287), Expect = e-138
Identities = 245/494 (49%), Positives = 324/494 (65%), Gaps = 4/494 (0%)
Frame = -1
Query: 2329 STYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFTF 2150
STY+ E YA+ + L+ W HYL+ EFVLFTDH ALK++ +Q +N +W ++LQ F F
Sbjct: 574 STYDQELYAVFRALRQWEHYLVQREFVLFTDHQALKYLHSQKVINKMHARWVSFLQKFPF 633
Query: 2149 VLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGN-ST 1973
+++HK+GT N+VAD EV+G ES +LY+ D F + + + S
Sbjct: 634 IIQHKSGTLNKVADALSRRASLLTILAQEVVGFESLKELYECDVEFKELWGKCNGKHPSA 693
Query: 1972 QFSLLDGFLFKGTRLCIPDCSWRLRIIQELHN---EGHFGRDKTFQLVSTSYFWPRLFKE 1802
F + DG+LFKG RLCIP S R ++I++LH GH GRDKT + T ++WP L ++
Sbjct: 694 DFHIRDGYLFKGDRLCIPCSSLREKLIRDLHGGGLSGHLGRDKTIASLETRFYWPHLRRD 753
Query: 1801 VQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVVD 1622
V RC+ICQVSKG + N GLYMPLPIP W D+SMDFV+GLPRTQ G+DS+FVVVD
Sbjct: 754 AGAIVKRCYICQVSKGQSQNTGLYMPLPIPEDIWQDLSMDFVLGLPRTQRGVDSVFVVVD 813
Query: 1621 RFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLRT 1442
RFSKM+HFIACKKT DA ++A LFF+ V RLHG+P++I+SDRD+KFLSHFW +LW++ T
Sbjct: 814 RFSKMSHFIACKKTADASNIAKLFFREVVRLHGVPKTIISDRDTKFLSHFWITLWRMFGT 873
Query: 1441 ELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGFS 1262
LK S HPQTDGQTEV NR+LGN++RS+ G KQWD+ L Q EFA+N A+H +TG S
Sbjct: 874 SLKRSSTAHPQTDGQTEVTNRTLGNMIRSVCGDKPKQWDLALPQVEFAYNSAVHSATGKS 933
Query: 1261 PFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAADK 1082
PF +V P+ +DL +P V +A+ + + L A+ K K AADK
Sbjct: 934 PFSLVYCSIPKHVVDLVKLPKAPGVSISAEAMAEDILATRDAVRAKLEATGQKNKEAADK 993
Query: 1081 HRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHTA 902
RR F+ GD V L KERF GTY KL PRK GPF+I+ K+N NAY + LP ++ +
Sbjct: 994 RRRLKVFKEGDEVMVFLRKERFPVGTYRKLQPRKYGPFKILRKLNDNAYVVALPEDMNIS 1053
Query: 901 DVFNVRHLIPYHGD 860
+ FNV + YH D
Sbjct: 1054 NTFNVADIYEYHAD 1067
>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
gi|462405925|gb|EMJ11389.1| hypothetical protein
PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 497 bits (1279), Expect = e-137
Identities = 243/495 (49%), Positives = 322/495 (65%), Gaps = 4/495 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
+STY+ EFYA+++ LK W HYLI EFVLFTDH ALK+I +Q ++ +W +LQ F+
Sbjct: 957 WSTYDQEFYAVVRALKQWEHYLIQKEFVLFTDHQALKYINSQKNIDKMHARWVTFLQKFS 1016
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPI-LDAVHAGNS 1976
FV+KH +G NRVAD EV+G E +LY+ D FG I +
Sbjct: 1017 FVIKHTSGKTNRVADALSRRASLLITLTQEVVGFECLKELYEGDADFGEIWTKCTNQEPM 1076
Query: 1975 TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHN---EGHFGRDKTFQLVSTSYFWPRLFK 1805
+ L +G+LFKG +LCIP S R ++I++LH GH GRDKT + ++WP+L +
Sbjct: 1077 ADYFLNEGYLFKGNQLCIPVSSLREKLIRDLHGGGLSGHLGRDKTIAGMEERFYWPQLKR 1136
Query: 1804 EVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVV 1625
+V V +C+ CQ SKG N GLYMPLP+P+ W D++MDFV+GLPRTQ G+DS+FVVV
Sbjct: 1137 DVGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQRGVDSVFVVV 1196
Query: 1624 DRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLR 1445
DRFSKMAHFIAC+KT DA ++A LFF+ V RLHG+P SI SDRD+KFLSHFW +LW+L
Sbjct: 1197 DRFSKMAHFIACRKTADASNIAKLFFREVVRLHGVPTSITSDRDTKFLSHFWITLWRLFG 1256
Query: 1444 TELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGF 1265
T L S HPQTDGQTEV NR+LGN++RS+ G KQWD L Q EFA+N A+H +TG
Sbjct: 1257 TTLNRSSTAHPQTDGQTEVTNRTLGNMVRSVCGEKPKQWDYALPQVEFAYNSAVHSATGK 1316
Query: 1264 SPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAAD 1085
SPF +V P +DL +P Q+ A L + + E Q L ++ KYK AAD
Sbjct: 1317 SPFSIVYTAMPNHVVDLVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAAD 1376
Query: 1084 KHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHT 905
KHRR F+ GD V L KERF GTY+KL P+K GP++++++IN NAY + LP +
Sbjct: 1377 KHRRVKVFQEGDSVMIFLRKERFPVGTYSKLKPKKYGPYKVLKRINDNAYVIELPDSMGI 1436
Query: 904 ADVFNVRHLIPYHGD 860
+++FNV L + D
Sbjct: 1437 SNIFNVADLYEFRED 1451
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 496 bits (1278), Expect = e-137
Identities = 247/518 (47%), Positives = 340/518 (65%), Gaps = 4/518 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+ E YA+++TL+ W+HYL EFV+ +DH++LKHI +Q K+N R KW +++ F
Sbjct: 1094 YSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFP 1153
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNS- 1976
+V+KHK G +N +AD ++ GLE+ D Y D F +L G +
Sbjct: 1154 YVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDAEFKDVLQNCKEGRTW 1213
Query: 1975 TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPRLFK 1805
+F L DGF+F+ +LCIP S RL ++QE H G HFG KT +++T +FWP++ +
Sbjct: 1214 NKFVLNDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGVKKTEDILATHFFWPKMRR 1273
Query: 1804 EVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVV 1625
+V+RFV+RC CQ +K GLYMPLP+PS PW DISMDFV+GLPRT+ G DSIFVVV
Sbjct: 1274 DVERFVARCTTCQRAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVV 1333
Query: 1624 DRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLR 1445
DRFSKMAHFI C K+ DAV+VA LFF+ + RLHG+P +IVSDRD+KFLSHFWR LW L
Sbjct: 1334 DRFSKMAHFIPCHKSDDAVNVADLFFREIIRLHGVPNTIVSDRDTKFLSHFWRCLWAKLG 1393
Query: 1444 TELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGF 1265
+L F + HPQTDGQTEVVNR+L +LR+++ ++ K W+ L EFA+NR++H +T
Sbjct: 1394 NKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKNNKKMWEECLPHIEFAYNRSLHSTTKM 1453
Query: 1264 SPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAAD 1085
PF++V GF PR+P+DL P+P ++V+ A E + +IH +N+ + KYK A D
Sbjct: 1454 CPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSELILKIHELTKENIERMNAKYKLARD 1513
Query: 1084 KHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHT 905
K R+HV F GD VW L K+RF +KL PR GPF+++EKIN NAY+L LP+
Sbjct: 1514 KGRKHVVFAPGDLVWLHLRKDRFPNLRKSKLMPRADGPFKVLEKINDNAYKLELPADFGV 1573
Query: 904 ADVFNVRHLIPYHGDLSDDDFSTLPNSGANFLFPGEND 791
+ FN+ L PY G+ + LP+ +F GE+D
Sbjct: 1574 SPTFNIADLKPYLGEEDE-----LPSRTTSFQ-EGEDD 1605
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 493 bits (1268), Expect = e-136
Identities = 239/495 (48%), Positives = 329/495 (66%), Gaps = 4/495 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+ E YA+++TL+ W+HYL EFV+ +DH++LKHI +Q K+N R KW +++ F
Sbjct: 1109 YSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFP 1168
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNS- 1976
+V+KHK G N +AD ++ GLE+ D Y D F +L+ G +
Sbjct: 1169 YVIKHKKGKDNVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDADFKDVLENCREGRTW 1228
Query: 1975 TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPRLFK 1805
+F + +GF+F+ +LCIP S RL ++QE H G HFG K +++T +FWPR+ +
Sbjct: 1229 NKFIINNGFVFRANKLCIPASSIRLLLLQEAHGGGLMGHFGVKKMEDVLATHFFWPRMRR 1288
Query: 1804 EVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVV 1625
+V+RFV+RC CQ +K GLYMPLP+PS PW DISMDFV+GLPRT+ G DSIFVVV
Sbjct: 1289 DVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVV 1348
Query: 1624 DRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLR 1445
DRFSKMAHFI C K+ DA +VA LFF+ + RLHG+P +IVSDRD+KFLSHFWR LW L
Sbjct: 1349 DRFSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTIVSDRDAKFLSHFWRCLWAKLG 1408
Query: 1444 TELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGF 1265
T+L F + HPQTDGQTEVVNRSL +LR+++ ++ K W+ L EFA+NR++H +T
Sbjct: 1409 TKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKNNIKLWEECLPHIEFAYNRSLHSTTKM 1468
Query: 1264 SPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAAD 1085
PF++V GF PR+P+DL P+P ++V+ A E + ++H +N+ + +YK A D
Sbjct: 1469 CPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGD 1528
Query: 1084 KHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHT 905
K R+HV F GD VW L K+RF +KL PR GPF+++EKIN NAYRL LP+
Sbjct: 1529 KGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPADFGV 1588
Query: 904 ADVFNVRHLIPYHGD 860
+ FN+ L PY G+
Sbjct: 1589 SPTFNIADLKPYLGE 1603
>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
gi|462402874|gb|EMJ08431.1| hypothetical protein
PRUPE_ppa026856mg [Prunus persica]
Length = 1493
Score = 491 bits (1265), Expect = e-136
Identities = 240/495 (48%), Positives = 319/495 (64%), Gaps = 4/495 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
+STY+ EFYA+++ LK W HYLI EFVLFTDH ALK+I +Q ++ +W +LQ F+
Sbjct: 965 WSTYDQEFYAVVRALKQWEHYLIQKEFVLFTDHQALKYINSQKNIDKMHARWVTFLQKFS 1024
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPI-LDAVHAGNS 1976
FV+KH +G NRVAD EV+G E +LY+ D F I +
Sbjct: 1025 FVIKHTSGKTNRVADALSRRASLLITLTQEVVGFECLKELYEGDDDFREIWTKCTNQEPM 1084
Query: 1975 TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHN---EGHFGRDKTFQLVSTSYFWPRLFK 1805
T + L +G+LFKG +LCIP S R ++I++LH GH GRDKT + ++WP+L +
Sbjct: 1085 TDYFLTEGYLFKGNQLCIPVSSLREKLIRDLHGGGLSGHLGRDKTIAGMEERFYWPQLKR 1144
Query: 1804 EVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVV 1625
+V V +C+ CQ SKG N GLYMPLP+P+ W D++MDFV+G PRTQ +DS+FVV
Sbjct: 1145 DVGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGFPRTQRRVDSVFVVA 1204
Query: 1624 DRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLR 1445
DRFSKMAHFIACKKT DA ++A LFF+ V RLHG+P SI SDRD+KFLSHFW +LW+L
Sbjct: 1205 DRFSKMAHFIACKKTADASNIAKLFFREVVRLHGVPTSITSDRDTKFLSHFWITLWRLFG 1264
Query: 1444 TELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGF 1265
T L S HPQTDGQTEV NR+LGN++RS+ G KQWD L Q EFA+N A+H +TG
Sbjct: 1265 TTLNRSSTAHPQTDGQTEVTNRTLGNMVRSVCGEKPKQWDYALPQMEFAYNSAVHSATGK 1324
Query: 1264 SPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAAD 1085
SPF +V P +DL +P Q+ A L + + E Q L ++ KYK AAD
Sbjct: 1325 SPFSIVYTATPNHVVDLVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAAD 1384
Query: 1084 KHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHT 905
+HRR F+ GD V L KERF GTY+KL P+K GP++++++IN NAY + LP +
Sbjct: 1385 RHRRVKVFQEGDSVMVFLRKERFPAGTYSKLKPKKYGPYKVLKRINDNAYDIELPDSMGI 1444
Query: 904 ADVFNVRHLIPYHGD 860
+++FNV L + D
Sbjct: 1445 SNIFNVADLYEFRED 1459
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 489 bits (1260), Expect = e-135
Identities = 236/495 (47%), Positives = 327/495 (66%), Gaps = 4/495 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+ E YA+++TL+ W+HYL EFV+ +DH++LKHI +Q K+N R KW +++ F
Sbjct: 1050 YSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFP 1109
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNS- 1976
+V+KHK G +N +AD ++ GLE+ D Y D F +L G +
Sbjct: 1110 YVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRTW 1169
Query: 1975 TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPRLFK 1805
+F + DGF+F+ +LCIP S RL ++QE H G HFG KT ++++ +FWP++ +
Sbjct: 1170 NKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRR 1229
Query: 1804 EVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVV 1625
+V RFV+RC CQ +K GLYMPLP+P+ PW DISMDFV+GLPRT+ G DSIFVVV
Sbjct: 1230 DVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVV 1289
Query: 1624 DRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLR 1445
DRFSKMAHFI C KT DA H+A LFF+ + RLHG+P +IVSDRD+KFLSHFWR+LW L
Sbjct: 1290 DRFSKMAHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLG 1349
Query: 1444 TELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGF 1265
T+L F + HPQTDGQTEVVNR+L +LR+++ + K W+ L EFA+NR++H +T
Sbjct: 1350 TKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTTKM 1409
Query: 1264 SPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAAD 1085
PFQ+V G PR+P+DL P+P ++++ A + + ++H +N+ + KYK A D
Sbjct: 1410 CPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGD 1469
Query: 1084 KHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHT 905
K RR + FE GD VW L KERF +KL PR GPF+++ KIN NAY++ LP+
Sbjct: 1470 KGRRELTFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGV 1529
Query: 904 ADVFNVRHLIPYHGD 860
+ FNV L PY G+
Sbjct: 1530 SPTFNVADLKPYLGE 1544
Score = 286 bits (732), Expect = 6e-74
Identities = 180/522 (34%), Positives = 265/522 (50%), Gaps = 37/522 (7%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
Y T++LE A++ LK WRHYLI + ++TDH +LK+I Q +N RQ +W ++D+
Sbjct: 1842 YPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYD 1901
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXT----------EVLGL---------------- 2051
+ + G N VAD E L L
Sbjct: 1902 VGIHYHPGKANVVADALSRKSHCNTLGVRGIPPELNQQMEALNLSIVSRGFLATLEAKPT 1961
Query: 2050 --ESFADLYKTDPYFGPILDAVHAGNSTQFSLLD-GFLFKGTRLCIPDC-SWRLRIIQEL 1883
+ + K DP +L + G + F + G L+ R+C+PD + I+QE
Sbjct: 1962 LLDQIREAQKNDPDMRGLLKNMKQGKAAGFIEDEHGTLWNRNRVCVPDVRELKQLILQEA 2021
Query: 1882 HNEG---HFGRDKTFQLVSTSYFWPRLFKEVQRFVSRCHICQVSKGSTTN-AGLYMPLPI 1715
H H G K + + Y+W + +E+ FV+ C +CQ K AGL PL +
Sbjct: 2022 HESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQV 2081
Query: 1714 PSKPWTDISMDFVVGLPRTQHGMDSIFVVVDRFSKMAHFIACKKTTDAVHVAFLFFQHVY 1535
P W +I MDF+ GLP+TQ G DSI+VVVDR +K+A FI K T +A L+F +
Sbjct: 2082 PEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIV 2141
Query: 1534 RLHGLPESIVSDRDSKFLSHFWRSLWKLLRTELKFGSAYHPQTDGQTEVVNRSLGNILRS 1355
LHG+P+ IVSDR+S+F SHFW+ L + L T L F +AYHPQTDGQTE +N+ L ++L +
Sbjct: 2142 SLHGVPKKIVSDRESQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHA 2201
Query: 1354 LVGSHTKQWDMHLFQAEFAFNRAIHKSTGFSPFQVVCGFNPRSPLDLAPVPDLQRVHATA 1175
V K WD L AEF++N + S +P++ + G R+PL V + Q
Sbjct: 2202 CVLDFGKTWDKSLPYAEFSYNNSYQASIQMAPYEALYGRKCRTPLLWDQVGESQ---VFG 2258
Query: 1174 DELVHHLQQIHAEAAQNLVASSTKYKTAADKHRRHVEFEVGDFVWAVLIKER--FSTGTY 1001
+++ + NL + ++ K+ AD RR++EF V DFV+ + R T
Sbjct: 2259 TDILREAEAKVRTIWDNLKVAQSRQKSYADNRRRNLEFAVDDFVYLRVTPLRGVHRFQTK 2318
Query: 1000 NKLGPRKIGPFEIIEKINPNAYRLRLPSHI-HTADVFNVRHL 878
KL PR +GPF II + AY+L LP+ + + DVF+V L
Sbjct: 2319 GKLAPRFVGPFRIIARRGEVAYQLELPASLGNVHDVFHVSQL 2360
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 488 bits (1257), Expect = e-135
Identities = 238/495 (48%), Positives = 327/495 (66%), Gaps = 4/495 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+ E YA+++TL+ W+HYL EFV+ +DH++LKHI +Q K+N R KW +++ F
Sbjct: 1106 YSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFP 1165
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNS- 1976
+V+K K G N +AD ++ GLE+ D Y D F +L+ G +
Sbjct: 1166 YVIKDKKGKDNVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDADFKDVLENCREGRTW 1225
Query: 1975 TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPRLFK 1805
+F + +GF+F+ +LCIP S RL ++QE H G HFG K +++T +FWPR+ +
Sbjct: 1226 NKFIINNGFVFRANKLCIPASSIRLLLLQEAHGGGLMGHFGVKKMEDVLATHFFWPRMRR 1285
Query: 1804 EVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVV 1625
+V+RFV+RC CQ +K GLYMPLP+PS PW DISMDFV+GLPRT+ G DSIFVVV
Sbjct: 1286 DVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVV 1345
Query: 1624 DRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLR 1445
DRFSKMAHFI C K+ DA +VA LFF+ + RLHG+P +IVSDRD+KFLSHFWR LW L
Sbjct: 1346 DRFSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTIVSDRDAKFLSHFWRCLWAKLG 1405
Query: 1444 TELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGF 1265
T+L F + HPQTDGQTEVVNRSL +LR+++ ++ K W+ L EFA+NR++H +T
Sbjct: 1406 TKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKTNLKLWEECLPHIEFAYNRSLHSTTKM 1465
Query: 1264 SPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAAD 1085
PF++V GF PR+P+DL P+P ++V+ A E + ++H +N+ + +YK A D
Sbjct: 1466 CPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGD 1525
Query: 1084 KHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHT 905
K R+HV F GD VW L K+RF +KL PR GPF+++EKIN NAYRL LP
Sbjct: 1526 KGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPXDFGV 1585
Query: 904 ADVFNVRHLIPYHGD 860
+ FN+ L PY G+
Sbjct: 1586 SPTFNIADLKPYLGE 1600
>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
Length = 1518
Score = 488 bits (1256), Expect = e-134
Identities = 247/509 (48%), Positives = 326/509 (64%), Gaps = 6/509 (1%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+ EFYAII+ L HW HYL FVL +DH+ALK+I Q K+N R KW +LQ FT
Sbjct: 947 YSTYDKEFYAIIRALMHWNHYLKPKPFVLHSDHEALKYINGQHKLNFRHAKWVEFLQSFT 1006
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGP---ILDAVHAG 1982
F K+K G +N VAD VLG E +LYK DP F H
Sbjct: 1007 FSSKYKEGKKNVVADALSRRHSLLSVMSNRVLGFEFMKELYKEDPDFSEEWITQTEGHKN 1066
Query: 1981 NSTQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPRL 1811
+++ L +GFLF+G +LC+P S+R +I+E+H+ G HFG KT +++ ++WPR+
Sbjct: 1067 QGSKYLLQEGFLFQGNKLCVPRGSYRDLLIREVHSGGMGGHFGVQKTLEILQDQFYWPRM 1126
Query: 1810 FKEVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFV 1631
+VQ + RC CQ+SK S+ G Y PLP+PSKPW D+SMDF+V LPRTQ G DS+ V
Sbjct: 1127 MGDVQIILRRCSKCQLSK-SSFQPGPYTPLPVPSKPWEDLSMDFIVALPRTQRGKDSVMV 1185
Query: 1630 VVDRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKL 1451
VVDRFSKMAHF+ACKKT DAV VA LF + + RLHG+P++IVSDRD+KF+ +FW++LWKL
Sbjct: 1186 VVDRFSKMAHFVACKKTEDAVSVAELFLKEIVRLHGVPKTIVSDRDTKFMGYFWKTLWKL 1245
Query: 1450 LRTELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKST 1271
L+T+L F +++HPQTDGQTEV NR+LG ILR LV K WD+ L AEFAFNRA +T
Sbjct: 1246 LKTKLLFSTSHHPQTDGQTEVTNRTLGRILRCLVSKSLKDWDLKLAAAEFAFNRAPSTAT 1305
Query: 1270 GFSPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTA 1091
G SPF+VV G NP PLDL+ VP + ++ A + L ++H + + ++ +Y+
Sbjct: 1306 GHSPFEVVYGVNPLMPLDLSSVPK-ENINLDAMKRAEQLLKLHETVKRQIERTNEQYQKH 1364
Query: 1090 ADKHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHI 911
+ EFE GD VW L KERF NKL PR GPFE++EKI P+AY++ LP
Sbjct: 1365 LKVPKGKKEFEPGDLVWIHLRKERFPAKRKNKLMPRSDGPFEVVEKIGPSAYKIDLPGDY 1424
Query: 910 HTADVFNVRHLIPYHGDLSDDDFSTLPNS 824
FNV L PY+ D D++ + L S
Sbjct: 1425 GVHGTFNVGDLSPYYEDSGDEEVTGLRTS 1453
>ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508700944|gb|EOX92840.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 647
Score = 488 bits (1255), Expect = e-134
Identities = 239/497 (48%), Positives = 329/497 (66%), Gaps = 7/497 (1%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+LEFYA+++ ++HW+HYL + EF +++DH AL+++ +Q K++ + KW+ +L +F
Sbjct: 140 YSTYDLEFYALVRAIRHWQHYLAYCEFAVYSDHQALRYLHSQKKLSNQHAKWSFFLNEFN 199
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPIL----DAVHA 1985
F LK+K+G N VAD T+V G E + Y +D YF I+ ++ A
Sbjct: 200 FSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQA 259
Query: 1984 GNSTQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPR 1814
GN + L + +LFKG +LCI + S R +II ELH G HFGRDKT +V+ Y+WP+
Sbjct: 260 GN-LPYRLHEDYLFKGNQLCILEGSLREQIIGELHGNGLGGHFGRDKTLAMVADRYYWPK 318
Query: 1813 LFKEVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIF 1634
+ ++V+R V RC C KGS N GLY+PL P PW +SMDFV+GLP+ G DSIF
Sbjct: 319 MHRDVERLVKRCSTCLFGKGSAQNTGLYVPLLEPDAPWIHLSMDFVLGLPKIAKGFDSIF 378
Query: 1633 VVVDRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWK 1454
VVV +FSKMAHFI C KT+DA H+A LFF V RLHG+P SIVSDRD KF+ HFWR+LW+
Sbjct: 379 VVVYQFSKMAHFIPCFKTSDATHIAELFFCEVVRLHGIPTSIVSDRDVKFMGHFWRTLWR 438
Query: 1453 LLRTELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKS 1274
TELK+ S HPQTDGQTEVVNRSLGN+LR L+ ++ K WD+ + QAEFA+N ++++S
Sbjct: 439 KFGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRS 498
Query: 1273 TGFSPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKT 1094
+PF+V G P+ LDL P+P RV + +H+++IH E L AS+ +Y
Sbjct: 499 IKKTPFEVAYGLKPQHVLDLVPLPQEARVSNEGELFAYHIRKIHEEVKAALKASNAEYSF 558
Query: 1093 AADKHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSH 914
A++HRR EFE GD V L +ERF GTY+KL RK GP ++I+KI+ NAY + LP
Sbjct: 559 TANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKVIKKISSNAYLIELPPE 618
Query: 913 IHTADVFNVRHLIPYHG 863
+ + +FNV L P+ G
Sbjct: 619 LQISPIFNVLDLYPFDG 635
>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1452
Score = 487 bits (1253), Expect = e-134
Identities = 243/538 (45%), Positives = 347/538 (64%), Gaps = 6/538 (1%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+LEFYA+++ ++HW+HYL + EF +++DH AL+++ +Q K++ + KW+++L +F
Sbjct: 872 YSTYDLEFYALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSNQHAKWSSFLNEFN 931
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNST 1973
F LK+K+G N VAD T+V G E + Y +D YF I+ +
Sbjct: 932 FSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQA 991
Query: 1972 Q---FSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPRL 1811
+ + L + +LFKG +LCIP+ S R +II+ELH G HFGRDKT +V+ Y+WP++
Sbjct: 992 ENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLVMVADRYYWPKM 1051
Query: 1810 FKEVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFV 1631
++V+R V RC C KGS N GLY+PLP P PW +SMDFV+GLP+T G DSIFV
Sbjct: 1052 RRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTTKGFDSIFV 1111
Query: 1630 VVDRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKL 1451
VVDRFSKMAHFI C +T+DA H+A LFF+ + LHG+P SIVSDR KF+ +FWR+LW+
Sbjct: 1112 VVDRFSKMAHFIPCFRTSDATHIAELFFREIVILHGIPTSIVSDRHVKFMGYFWRTLWRK 1171
Query: 1450 LRTELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKST 1271
TELK+ S HPQTDGQTEVVNRSLGN+LR L+ ++ K WD+ + QAEFA+N ++++S
Sbjct: 1172 FGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSI 1231
Query: 1270 GFSPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTA 1091
+PF+ G P+ LDL P+P RV + +++IH E L AS+ +Y
Sbjct: 1232 KKTPFEAAYGLKPQHVLDLVPLPQEARVSNEGELFADQIRKIHEEVKAALKASNAEYSFT 1291
Query: 1090 ADKHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHI 911
A++HRR EFE GD V L +ERF GTY+KL RK GP ++++KI+ NAY + LP +
Sbjct: 1292 ANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKVLKKISSNAYLIELPPEL 1351
Query: 910 HTADVFNVRHLIPYHGDLSDDDFSTLPNSGANFLFPGENDVVQDMAESYLEGRDRRKN 737
+FN+ L P+ G D ST+ ++ L + +V++D+ + E R RR N
Sbjct: 1352 QINPIFNILDLYPFDG--CDGTASTI-DAQIQHLPIAKVEVIEDVL-NVKEVRSRRGN 1405
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 486 bits (1250), Expect = e-134
Identities = 233/495 (47%), Positives = 325/495 (65%), Gaps = 4/495 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+ E YA+++TL+ W+HYL EFV+ +DH++LKHI +Q K+N R KW +++ F
Sbjct: 1053 YSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFP 1112
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNS- 1976
+V+KHK G +N +AD ++ GLE+ D Y D F +L G
Sbjct: 1113 YVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIKDQYVHDADFKDVLLHCKDGKGW 1172
Query: 1975 TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPRLFK 1805
++ + DGF+F+ +LCIP S RL ++QE H G HFG KT +++ +FWP++ +
Sbjct: 1173 NKYIVSDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTEDILAGHFFWPKMRR 1232
Query: 1804 EVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVV 1625
+V R V+RC CQ +K GLY+PLP+PS PW DISMDFV+GLPRT+ G DS+FVVV
Sbjct: 1233 DVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTRKGRDSVFVVV 1292
Query: 1624 DRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLR 1445
DRFSKMAHFI C KT DA H+A LFF+ + RLHG+P +IVSDRD+KFLSHFWR+LW L
Sbjct: 1293 DRFSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSHFWRTLWAKLG 1352
Query: 1444 TELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGF 1265
T+L F + HPQTDGQTEVVNR+L +LR+++ + K W+ L EFA+NR++H +T
Sbjct: 1353 TKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAYNRSLHSTTKM 1412
Query: 1264 SPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAAD 1085
PFQ+V G PR+P+DL P+P ++++ A + ++H +N+ + +YK A+D
Sbjct: 1413 CPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIERMNARYKFASD 1472
Query: 1084 KHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHT 905
K R+ + FE GD VW L KERF +KL PR GPF+++EKIN NAYRL LP+
Sbjct: 1473 KGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAYRLDLPADFGV 1532
Query: 904 ADVFNVRHLIPYHGD 860
+ FN+ L PY G+
Sbjct: 1533 SPTFNIADLKPYLGE 1547
>ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, partial [Prunus persica]
gi|462418685|gb|EMJ22948.1| hypothetical protein
PRUPE_ppb022800mg, partial [Prunus persica]
Length = 722
Score = 483 bits (1243), Expect = e-133
Identities = 237/496 (47%), Positives = 324/496 (65%), Gaps = 6/496 (1%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY EFY+I++ L++W++YL+ +EFVL++DH AL+++ +Q +++R +KW YLQ FT
Sbjct: 125 YSTYNKEFYSIVRALRYWQYYLLPNEFVLYSDHQALRYLHSQRNVSSRHIKWTEYLQIFT 184
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNS- 1976
FV++H+ G N+VAD +V+G + Y + P FG I V A N
Sbjct: 185 FVIRHRPGVDNKVADALSRVGVILQSLTAQVVGFDKIKTEYSSCPDFGLIFQEVTARNRR 244
Query: 1975 --TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHN---EGHFGRDKTFQLVSTSYFWPRL 1811
F L DG+LF+GT+LCIP S R ++ ELH GHFG+DKT LV+ ++WP L
Sbjct: 245 DHVDFLLRDGYLFRGTQLCIPRTSLRDFLVWELHAGGLAGHFGKDKTITLVADRFYWPSL 304
Query: 1810 FKEVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFV 1631
++V +++C CQ++K N GLY PLPIP PW D+SMDFV+GLP+T G DSI V
Sbjct: 305 KRDVAHILAQCRTCQLAKARKQNTGLYTPLPIPHTPWKDLSMDFVLGLPKTARGHDSILV 364
Query: 1630 VVDRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKL 1451
VVDRFSKMAHF+ C K DA +VA LFF+ V LHGLP SIVSDRD KF+S+FW++LWKL
Sbjct: 365 VVDRFSKMAHFLPCSKAADASYVAKLFFKEVIHLHGLPVSIVSDRDVKFVSYFWKTLWKL 424
Query: 1450 LRTELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKST 1271
T LKF SA+HPQTDGQTEVVNRSL ++LR LVG WD+ L AEFA+N + +++T
Sbjct: 425 FGTSLKFSSAFHPQTDGQTEVVNRSLRDLLRCLVGDKQGNWDLILPVAEFAYNNSANRTT 484
Query: 1270 GFSPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTA 1091
G SPF++V G PR P+DLAP+P R +A H++ Q + S+ Y+ A
Sbjct: 485 GKSPFEIVYGVMPRPPIDLAPLPIDARPSESATTFAEHIR-------QKISLSTNTYQLA 537
Query: 1090 ADKHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHI 911
A+ HRR +F+ GD+V + ERF ++ KL R +GP+ I+ K+ NAY + LPS +
Sbjct: 538 ANTHRRTQDFQEGDYVMVRVCPERFPKHSFKKLHARSMGPYRILRKLGANAYLVELPSDV 597
Query: 910 HTADVFNVRHLIPYHG 863
H + +FNV L PY G
Sbjct: 598 HISPIFNVSDLFPYRG 613
>ref|XP_013689613.1| PREDICTED: uncharacterized protein LOC106393458 [Brassica napus]
Length = 2061
Score = 481 bits (1238), Expect = e-132
Identities = 233/491 (47%), Positives = 322/491 (65%), Gaps = 3/491 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
Y+TY+ E YA+++ L+ W+HYL EFV+ TDH++LK++ Q K++ R +W +++ F
Sbjct: 1565 YATYDKELYALVRALQTWQHYLWPKEFVIHTDHESLKYLKGQSKLSKRHARWVEFIETFP 1624
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNST 1973
+V+K+K G +N VAD ++LG E ++Y++DP F + S
Sbjct: 1625 YVIKYKQGKENIVADALSRRYVLLTTLDAKLLGFEQIKEMYESDPDFQEAYKSCAKYASG 1684
Query: 1972 QFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNE---GHFGRDKTFQLVSTSYFWPRLFKE 1802
+ DGFLF RLC+P+CS R ++E H GHFG KT +++ ++WP + ++
Sbjct: 1685 HYFRHDGFLFYDNRLCVPNCSLRDLFVREFHGGSLMGHFGIAKTLKVLQDHFYWPHMKRD 1744
Query: 1801 VQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVVD 1622
V R RC C+++K GLY PLPIP+ PW DISMDFV+GLPRT+ G DSIFVVVD
Sbjct: 1745 VGRICGRCTTCKLAKSKVQPHGLYTPLPIPTHPWNDISMDFVMGLPRTRTGKDSIFVVVD 1804
Query: 1621 RFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLRT 1442
RFSKMAHFIAC KT DA+HVA LFF+ V RLHG+P +IVSDRD+KFLS+FW++LW L T
Sbjct: 1805 RFSKMAHFIACNKTDDALHVANLFFKEVVRLHGMPRTIVSDRDTKFLSYFWKTLWSKLGT 1864
Query: 1441 ELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGFS 1262
+L F + HPQTDGQTEVVNR+LG +LR+ + + K W+ +L EFA+N A+H ++ FS
Sbjct: 1865 KLLFSTTCHPQTDGQTEVVNRTLGTLLRAFIKKNLKSWEDYLPHCEFAYNHAMHSASKFS 1924
Query: 1261 PFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAADK 1082
F++V GFNP SPLDL P+P+ +RV + +QQIH +A +NL + +Y A+K
Sbjct: 1925 TFEIVYGFNPISPLDLIPLPECERVSMDGKKKAEMVQQIHEQAKRNLEDKTKQYAKQANK 1984
Query: 1081 HRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHTA 902
RR + FEVGD VW L KERF +KL PR GPFE+ ++IN NAY+L L +
Sbjct: 1985 GRREMIFEVGDQVWVHLRKERFPKERKSKLMPRINGPFEVTKRINDNAYKLDLQGKYDIS 2044
Query: 901 DVFNVRHLIPY 869
D FNV LIP+
Sbjct: 2045 DSFNVTDLIPF 2055
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 480 bits (1235), Expect = e-132
Identities = 232/495 (46%), Positives = 323/495 (65%), Gaps = 4/495 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+ E YA+++TL+ W+HYL EFV+ +DH++LKHI +Q K+N R KW +++ F
Sbjct: 1029 YSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFP 1088
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNS- 1976
+V+KHK G +N +A+ ++ GLE+ D Y D F +L G +
Sbjct: 1089 YVIKHKKGKENIIANALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRTW 1148
Query: 1975 TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPRLFK 1805
+F + DGF+F+ +LCIP S RL ++QE H G HFG KT ++++ +FWP++ +
Sbjct: 1149 NKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRR 1208
Query: 1804 EVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVV 1625
+V RFV+RC CQ +K GLYMPLP+P+ PW DISMDFV+GLPRT+ G DSIFVVV
Sbjct: 1209 DVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVV 1268
Query: 1624 DRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLR 1445
DRFSKM HFI C KT DA H+A LFF+ + RLHG+P +IVSDRD+KFLSHFWR+LW L
Sbjct: 1269 DRFSKMVHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLG 1328
Query: 1444 TELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGF 1265
T+L F + HPQTDGQ EVVNR+L +LR+++ + K W+ L EFA NR++H +T
Sbjct: 1329 TKLLFSTTCHPQTDGQIEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFACNRSLHSTTKM 1388
Query: 1264 SPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAAD 1085
PFQ+V PR+P+DL P+P ++++ A + + ++H +N+ + KYK A D
Sbjct: 1389 CPFQIVYSLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGD 1448
Query: 1084 KHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHT 905
K RR + FE GD VW L KERF +KL PR GPF+++ KIN NAY++ LP+
Sbjct: 1449 KGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGV 1508
Query: 904 ADVFNVRHLIPYHGD 860
+ FNV L PY G+
Sbjct: 1509 SPTFNVADLKPYLGE 1523
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 479 bits (1233), Expect = e-132
Identities = 232/495 (46%), Positives = 325/495 (65%), Gaps = 4/495 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+ E +A+++TL+ W+HYL EFV+ +DH++LKHI +Q K+N R KW +++ F
Sbjct: 1078 YSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFP 1137
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNS- 1976
+V+KHK G +N +AD ++ GLE+ + Y D F +L G +
Sbjct: 1138 YVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNCKEGRTW 1197
Query: 1975 TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPRLFK 1805
+F L +GF+F+ +LCIP S R+ ++QE H G HFG KT +++ +FWP++ +
Sbjct: 1198 NKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRR 1257
Query: 1804 EVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVV 1625
+V+RFV+RC CQ +K GLYMPLP+PS PW DISMDFV+GLPRT+ G DSIFVVV
Sbjct: 1258 DVERFVARCTTCQKAKLRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVV 1317
Query: 1624 DRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLR 1445
DRFSKMAHFI C K+ DA HVA LFF+ + RLHG+P +IVSDRD+KFLSHFWR+LW L
Sbjct: 1318 DRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLG 1377
Query: 1444 TELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGF 1265
T+L F + HPQTDGQTEVVNR+L +LR+++ + K W+ L EFA+NR+ H +T
Sbjct: 1378 TKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKK 1437
Query: 1264 SPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAAD 1085
PF++V G PR+P+DL P+P +RV+ A + ++H +N+ + KYK A
Sbjct: 1438 CPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYHAELMLKLHETTKENIERMNIKYKLAGS 1497
Query: 1084 KHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHT 905
K ++HV FE GD VW L K+RF +KL PR GPF++++KIN N Y+L LP+
Sbjct: 1498 KGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNTYKLELPADFGV 1557
Query: 904 ADVFNVRHLIPYHGD 860
+ FN+ L PY G+
Sbjct: 1558 SPTFNIADLKPYLGE 1572
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 479 bits (1233), Expect = e-132
Identities = 232/495 (46%), Positives = 324/495 (65%), Gaps = 4/495 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+ E +A+++TL+ W+HYL EFV+ +DH++LKHI +Q K+N R KW +++ F
Sbjct: 1078 YSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFP 1137
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNS- 1976
+V+KHK G +N +AD ++ GLE+ + Y D F +L G +
Sbjct: 1138 YVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDDDFKNVLLNCKEGRTW 1197
Query: 1975 TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPRLFK 1805
+F L +GF+F+ +LCIP S R+ ++QE H G HFG KT +++ +FWP++ +
Sbjct: 1198 NKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRR 1257
Query: 1804 EVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVV 1625
+V+RFV+RC CQ +K GLYMPLP+PS PW DISMDFV+GLPRT+ G DSIFVVV
Sbjct: 1258 DVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVV 1317
Query: 1624 DRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLR 1445
DRFSKMAHFI C K+ DA HVA LFF+ + RLHG+P +IVSDRD+KFLSHFWR+LW L
Sbjct: 1318 DRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLG 1377
Query: 1444 TELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGF 1265
T+ F + HPQTDGQTEVVNR+L +LR+++ + K W+ L EFA+NR+ H +T
Sbjct: 1378 TKFLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKK 1437
Query: 1264 SPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAAD 1085
PF++V G PR+P+DL P P +RV+ A + ++H +N+ + KYK A
Sbjct: 1438 CPFEIVYGLLPRAPIDLLPHPTSERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGS 1497
Query: 1084 KHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHT 905
K ++HV FE GD VW L K+RF +KL PR GPF++++KIN NAY+L LP+
Sbjct: 1498 KGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNAYKLELPADFGV 1557
Query: 904 ADVFNVRHLIPYHGD 860
+ FN+ L PY G+
Sbjct: 1558 SPTFNIADLKPYLGE 1572
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 479 bits (1232), Expect = e-132
Identities = 230/495 (46%), Positives = 324/495 (65%), Gaps = 4/495 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+ + +A+++TL+ W+HYL EFV+ +DH++LKHI +Q K+N R KW +++ F
Sbjct: 974 YSTYDKQLFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFP 1033
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNS- 1976
+V+KHK G +N + D ++ GLE+ + Y D F +L G +
Sbjct: 1034 YVIKHKKGKENVIVDALSRRYAMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNCKEGRTW 1093
Query: 1975 TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPRLFK 1805
+F L +GF+F+ +LCIP S + ++QE H G HFG KT +++ FWP++ +
Sbjct: 1094 NKFVLTNGFVFRANKLCIPASSVHMLLLQEAHGGGLMGHFGVKKTEDILADHLFWPKMRR 1153
Query: 1804 EVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVV 1625
+V+RFV+RC CQ +K GLYMPLP+PS PW DISMDFV+GLPRT+ G DSIFVVV
Sbjct: 1154 DVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVV 1213
Query: 1624 DRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLR 1445
DRFSKMAHFI C K+ DA HVA LFF+ + RLHG+P +IVSDRD+KFLSHFWR+LW L
Sbjct: 1214 DRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLG 1273
Query: 1444 TELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGF 1265
T+L F + HPQTDGQTEVVNR++ +LR+++ + K W+ L EFA+NR+ H +T
Sbjct: 1274 TKLLFSTTCHPQTDGQTEVVNRTVSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKK 1333
Query: 1264 SPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAAD 1085
PF++V G PR+P+DL P+P L+RV+ A + ++H +N+ + KYK A
Sbjct: 1334 CPFEIVYGLLPRAPIDLLPLPTLERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGS 1393
Query: 1084 KHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHT 905
K ++HV FE GD VW L K+RF +KL PR GPF++++KIN NAY+L LP+
Sbjct: 1394 KGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLPPRADGPFQVLQKINDNAYKLELPADFGV 1453
Query: 904 ADVFNVRHLIPYHGD 860
+ FN+ L PY G+
Sbjct: 1454 SPTFNIADLKPYLGE 1468
>dbj|BAA89466.1| gag-pol polyprotein, partial [Oryza sativa Indica Group]
Length = 1587
Score = 475 bits (1223), Expect = e-131
Identities = 231/495 (46%), Positives = 322/495 (65%), Gaps = 4/495 (0%)
Frame = -1
Query: 2332 YSTYELEFYAIIQTLKHWRHYLIHSEFVLFTDHDALKHIGNQDKMNARQVKWANYLQDFT 2153
YSTY+ E +A+++TL+ W+HYL EFV+ +DH++LKHI +Q K N R KW +++ F
Sbjct: 1078 YSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKHNRRHAKWVEFIESFP 1137
Query: 2152 FVLKHKAGTQNRVADGXXXXXXXXXXXXTEVLGLESFADLYKTDPYFGPILDAVHAGNS- 1976
+V+KHK G +N +AD ++ GLE+ + Y D F +L G +
Sbjct: 1138 YVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNCKEGRTW 1197
Query: 1975 TQFSLLDGFLFKGTRLCIPDCSWRLRIIQELHNEG---HFGRDKTFQLVSTSYFWPRLFK 1805
+F L +GF+F+ +LCIP S + ++QE H G HFG K +++ +FWP+ +
Sbjct: 1198 NKFVLTNGFVFRANKLCIPASSVHMLLLQEAHGGGLMGHFGVKKMEDILADHFFWPKKRR 1257
Query: 1804 EVQRFVSRCHICQVSKGSTTNAGLYMPLPIPSKPWTDISMDFVVGLPRTQHGMDSIFVVV 1625
+V+RFV+RC CQ +K GLYMPLP+PS PW DISMDFV+GLPRT+ G DSIFVVV
Sbjct: 1258 DVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVV 1317
Query: 1624 DRFSKMAHFIACKKTTDAVHVAFLFFQHVYRLHGLPESIVSDRDSKFLSHFWRSLWKLLR 1445
DRFSKMAHFI C K+ DA HVA LFF+ + RLHG+P +IVSDRD+KFLSHFWR+LW L
Sbjct: 1318 DRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLG 1377
Query: 1444 TELKFGSAYHPQTDGQTEVVNRSLGNILRSLVGSHTKQWDMHLFQAEFAFNRAIHKSTGF 1265
T+L F + HPQTDGQTEVVNR+L +LR+++ + K W+ L EFA+NR+ H +T
Sbjct: 1378 TKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKK 1437
Query: 1264 SPFQVVCGFNPRSPLDLAPVPDLQRVHATADELVHHLQQIHAEAAQNLVASSTKYKTAAD 1085
PF++V G PR+P+DL P+P +RV+ A + ++H +N+ + KYK A
Sbjct: 1438 CPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGS 1497
Query: 1084 KHRRHVEFEVGDFVWAVLIKERFSTGTYNKLGPRKIGPFEIIEKINPNAYRLRLPSHIHT 905
K ++HV FE GD VW L K+RF +KL PR GPF++++KIN NAY+L LP+
Sbjct: 1498 KGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNAYKLELPADFGV 1557
Query: 904 ADVFNVRHLIPYHGD 860
+ FN+ L PY G+
Sbjct: 1558 SPTFNIADLKPYLGE 1572