BLASTX nr result

ID: Papaver30_contig00053209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00053209
         (1062 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KRH14042.1| hypothetical protein GLYMA_14G003000 [Glycine max]      40   3e-06
gb|KHN46880.1| Pentatricopeptide repeat-containing protein, chlo...    40   3e-06

>gb|KRH14042.1| hypothetical protein GLYMA_14G003000 [Glycine max]
          Length = 786

 Score = 40.0 bits (92), Expect(2) = 3e-06
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 28/71 (39%)
 Frame = -1

Query: 903 NVHAWNTMISWYTKTGRYLE----------------------------DWKSFVILWRLL 808
           NV AWNT+ISW+ KT R+L                             D K+ ++ + LL
Sbjct: 160 NVVAWNTLISWFVKTHRHLHALRAFATLIKTSITPSPVTFVNVFPAVPDPKTALMFYALL 219

Query: 807 LKLSADYVSDL 775
           LK  ADYV+D+
Sbjct: 220 LKFGADYVNDV 230



 Score = 40.0 bits (92), Expect(2) = 3e-06
 Identities = 19/41 (46%), Positives = 25/41 (60%)
 Frame = -3

Query: 778 SGDLVFSGLADFYAARQVFNWSRHMTIEIWNTMIGGYAQND 656
           S  ++FS L     AR VF+   +   E+WNTMIGGY QN+
Sbjct: 235 SAIVLFSDLGCLDHARMVFDRCSNKNTEVWNTMIGGYVQNN 275


>gb|KHN46880.1| Pentatricopeptide repeat-containing protein, chloroplastic [Glycine
           soja]
          Length = 730

 Score = 40.0 bits (92), Expect(2) = 3e-06
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 28/71 (39%)
 Frame = -1

Query: 903 NVHAWNTMISWYTKTGRYLE----------------------------DWKSFVILWRLL 808
           NV AWNT+ISW+ KT R+L                             D K+ ++ + LL
Sbjct: 90  NVVAWNTLISWFVKTHRHLHALRAFATLIKTSITPSPVTFVNVFPAVPDPKTALMFYALL 149

Query: 807 LKLSADYVSDL 775
           LK  ADYV+D+
Sbjct: 150 LKFGADYVNDV 160



 Score = 40.0 bits (92), Expect(2) = 3e-06
 Identities = 19/41 (46%), Positives = 25/41 (60%)
 Frame = -3

Query: 778 SGDLVFSGLADFYAARQVFNWSRHMTIEIWNTMIGGYAQND 656
           S  ++FS L     AR VF+   +   E+WNTMIGGY QN+
Sbjct: 165 SAIVLFSDLGCLDHARMVFDRCSNKNTEVWNTMIGGYVQNN 205


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