BLASTX nr result

ID: Papaver30_contig00053189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00053189
         (1019 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007035379.1| F-box and associated interaction domains-con...    49   4e-06
ref|XP_007035380.1| F-box and associated interaction domains-con...    49   4e-06

>ref|XP_007035379.1| F-box and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|508714408|gb|EOY06305.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao]
          Length = 476

 Score = 48.9 bits (115), Expect(2) = 4e-06
 Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
 Frame = -2

Query: 916 WRNLGKFNPQFRTDSLRERGVFANGLLYWLD---NKLEMILTFDLDAEKFSESISPPPLP 746
           WR++G  N    T +L     F NG L+W     N  E I +FD + E+F  ++ PP   
Sbjct: 215 WRSIG--NAPTDTVAL-PFNAFLNGTLHWFPCTPNGSEFIHSFDFETEQFG-TLPPPDHF 270

Query: 745 QDGNRLIWN--RIGVLDGYLFFAISLDVLVYYDIWLLKKKNHKEGEEHQSLGWTKEF 581
           ++ ++   N  RIGVL G LF  I     + +DIW++K+   KE        WTK+F
Sbjct: 271 REEDKKFTNYARIGVLGGCLFI-IYFTNSIRFDIWVMKEYGVKE-------SWTKQF 319



 Score = 30.4 bits (67), Expect(2) = 4e-06
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = -1

Query: 1019 GYVSSTNEYKVVGIYVSNTEFIEVH----IYTLGSGN 921
            GY + TN+YKV+  Y    E  E H    IYT+G+G+
Sbjct: 178  GYSAVTNQYKVLQSYYPAIESAERHVVAEIYTIGTGS 214


>ref|XP_007035380.1| F-box and associated interaction domains-containing protein,
           putative isoform 2, partial [Theobroma cacao]
           gi|508714409|gb|EOY06306.1| F-box and associated
           interaction domains-containing protein, putative isoform
           2, partial [Theobroma cacao]
          Length = 465

 Score = 48.9 bits (115), Expect(2) = 4e-06
 Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
 Frame = -2

Query: 916 WRNLGKFNPQFRTDSLRERGVFANGLLYWLD---NKLEMILTFDLDAEKFSESISPPPLP 746
           WR++G  N    T +L     F NG L+W     N  E I +FD + E+F  ++ PP   
Sbjct: 215 WRSIG--NAPTDTVAL-PFNAFLNGTLHWFPCTPNGSEFIHSFDFETEQFG-TLPPPDHF 270

Query: 745 QDGNRLIWN--RIGVLDGYLFFAISLDVLVYYDIWLLKKKNHKEGEEHQSLGWTKEF 581
           ++ ++   N  RIGVL G LF  I     + +DIW++K+   KE        WTK+F
Sbjct: 271 REEDKKFTNYARIGVLGGCLFI-IYFTNSIRFDIWVMKEYGVKE-------SWTKQF 319



 Score = 30.4 bits (67), Expect(2) = 4e-06
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = -1

Query: 1019 GYVSSTNEYKVVGIYVSNTEFIEVH----IYTLGSGN 921
            GY + TN+YKV+  Y    E  E H    IYT+G+G+
Sbjct: 178  GYSAVTNQYKVLQSYYPAIESAERHVVAEIYTIGTGS 214


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