BLASTX nr result
ID: Papaver30_contig00051433
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00051433
(1994 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha... 308 4e-89
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 310 2e-88
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 299 2e-87
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 299 2e-87
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 322 1e-84
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi... 320 3e-84
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera] 287 7e-84
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 316 4e-83
emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera] 285 2e-82
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697... 310 2e-81
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 310 3e-81
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 308 9e-81
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 281 2e-80
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi... 305 1e-79
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 301 2e-78
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 300 3e-78
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 298 1e-77
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana] 276 3e-77
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 274 8e-77
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 274 8e-77
>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
Length = 1392
Score = 308 bits (790), Expect(2) = 4e-89
Identities = 198/604 (32%), Positives = 294/604 (48%), Gaps = 28/604 (4%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W+ L R+F + RK L+ +L + K++ Y E+K I D +IG V E + +
Sbjct: 108 WLGLARRFNRFSTTRKYDLQKRLGTCSKAGKTMDAYLSEVKNICDQLDSIGFPVTEQEKI 167
Query: 1551 MYALTGLGKEYMQFVISAKNRETVFS---LNEVMSRLLHHEQWLKAEEAETT-------- 1405
L GLGKEY ++ V+ ++V+ +L + L A +
Sbjct: 168 FGVLNGLGKEYESIATVIEHSLDVYPGPCFDDVVYKLTTFDDKLSTYTANSEVTPHLAFY 227
Query: 1404 ---SVIDXXXXXXXXXXXXXXXSRSKSDNR-----------NTNTVNDFSQVECQICKKK 1267
S R +R + N + S+ CQIC+K
Sbjct: 228 TDKSYSSRGNNNSRGGRYGNFRGRGSYSSRGRGFHQQFGSGSNNGSGNGSKPTCQICRKY 287
Query: 1266 GHTANRCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNI 1087
GH+A +C+ R+ N + L AFAA+ ++ +S
Sbjct: 288 GHSAFKCYTRFEENYLPED-------------------LPNAFAAMRVSDQNQASSHE-- 326
Query: 1086 VSVWLPHSGDTNHITKDAHLL--TQDYSGSDKVMVGDGTFLPIEKICNIVLDTNTSQFQL 913
WLP S T HIT L +Q YSG D V+VG+G FLPI I I L+ + L
Sbjct: 327 ---WLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLPITHIGTIPLNISQGTLPL 383
Query: 912 DDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKIKNNLYPMEGI 733
+DVL P I ++LLS++K T D S F IK RT+++L +G LY ++ +
Sbjct: 384 EDVLVCPGITKSLLSVSKLTDDYPCSFTFDSDSVVIKDKRTQQLLTQGNKHKGLYVLKDV 443
Query: 732 TSFALTATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTSSIQLDSTDECLSEACQMG 553
+T + + +WH+RLGH L+ + T +I ++ T + EACQMG
Sbjct: 444 PFQTYYSTR-----QQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSNMCEACQMG 498
Query: 552 KNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSRYH*IYPFKCRT 373
K +LP S+ +S PL IHCD+WGPAP TS+ GF+YY++FID+YSR+ YP K ++
Sbjct: 499 KVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDNYSRFTWFYPLKLKS 558
Query: 372 KSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYRVSCPHLHQQNG 193
+ F F+ EN I FQCDG E V +F L GI +SCPH QQNG
Sbjct: 559 DFFSVFVLFQQLVENQYQHKIAMFQCDGGGEFVSYKFVAHLASCGIKQLISCPHTPQQNG 618
Query: 192 LAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVL-HFQSPYEVLFNTL 16
+AER+H+Y+TE+G +L F + +P W ++F TS+++ N LP+ L +SPYE+L T
Sbjct: 619 IAERRHRYLTELGLSLMFHSKVPHKLWVEAFFTSNFLSNLLPSSTLSDNKSPYEMLHGTP 678
Query: 15 PDYS 4
P Y+
Sbjct: 679 PVYT 682
Score = 50.1 bits (118), Expect(2) = 4e-89
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Frame = -1
Query: 1994 VKLREDGSNYLIWKNQFESVLITTDLFEMVDGTSVQPYETI-----DLDGETLPNPLFLH 1830
V L+ +NYL+WK QFES L + L V G + +P TI D+ E N FL
Sbjct: 16 VTLKLTPTNYLLWKTQFESYLSSHLLLGFVTGATPRPASTIIVTKDDIQSEE-ANQEFLK 74
Query: 1829 WRKMNRFVMLCLNATLDETISRGIIGFSTARQI 1731
W ++++ V + +L E + +IG ++A+++
Sbjct: 75 WTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEV 107
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 310 bits (795), Expect(2) = 2e-88
Identities = 210/620 (33%), Positives = 295/620 (47%), Gaps = 43/620 (6%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W LE+ F AR L + + K+G+ S+ Y ++K DS AAIGE V E D +
Sbjct: 118 WNALEKIFSSCSRARIMQLXLEFQSTKKGSMSMIDYIMKVKGAADSLAAIGEPVSEQDQI 177
Query: 1551 MYALTGLGKEYMQFVISAKNRETVFSLNEVMSRLLHHEQWLKAEEAETTSVIDXXXXXXX 1372
M L GLG +Y V + RE SL V S LL EQ L E+ + +
Sbjct: 178 MNLLGGLGSDYNAVVTAINIREDKISLEAVHSMLLAFEQRL--EQQGSIEQLPAMSANYA 235
Query: 1371 XXXXXXXXSRSKSDNRNTN---TVNDF--------------------SQVECQICKKKGH 1261
R + R N T ++F + +CQ+C K GH
Sbjct: 236 SXSNNRGGGRKYNGGRGPNFMMTNSNFRGRGRGXRYGQSGRQNSSSSERPQCQLCGKFGH 295
Query: 1260 TANRCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSD----- 1096
T C+ R+ F + N+ V+NS
Sbjct: 296 TVQVCYHRF----------------------------DITFQSTQNNTTGVSNSGNSNXM 327
Query: 1095 PNIVSV--------WLPHSGDTNHITKDAHLLTQ--DYSGSDKVMVGDGTFLPIEKICNI 946
P +V+ W SG ++H+T++ LT Y+G+DKV +G+G L I
Sbjct: 328 PAMVAXSNNXADDNWYLDSGASHHLTQNVANLTNATPYTGADKVTIGNGKHLTISNTXFT 387
Query: 945 VLDTNTSQFQLDDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGK 766
L +N FQL V +VP I NL+S+ KF DN +EF + +K + T+RVLA+GK
Sbjct: 388 RLFSNPHSFQLKKVFHVPFISANLISVAKFCSDNNALIEFHSNGFFLKDLHTKRVLAQGK 447
Query: 765 IKNNLYPMEGITSFALTATTIPTAFTSKTSNA-----LWHRRLGHTTALSLKKIASTSSI 601
++N LY I++ I T + SN LWH RLGH + +I ++
Sbjct: 448 LENGLYKFPVISNKKTAYVGITNDSTFQCSNIENKRELWHHRLGHAATDIVTRIMHNCNV 507
Query: 600 QLDSTDECLSEACQMGKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFI 421
+ +CQ+ K+H+LP LS S PL L++ DIWGPA TS+ G KY+ILF+
Sbjct: 508 SCGKYKATVCSSCQLAKSHRLPTHLSSFHASKPLELVYTDIWGPASVTSTSGAKYFILFV 567
Query: 420 DDYSRYH*IYPFKCRTKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKS 241
DDYSRY +Y + + ++L F+ FK EN A IK Q D E F FL +S
Sbjct: 568 DDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFEAKIKCLQXDNGGEF--RSFMSFLQES 625
Query: 240 GILYRVSCPHLHQQNGLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTK 61
GIL+R SCP+ QNG ERKH+++ E G L A LP FW+ +F T++++INR+P+K
Sbjct: 626 GILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRMPSK 685
Query: 60 VLHFQSPYEVLFNTLPDYSF 1
VL SPY LF PDY F
Sbjct: 686 VLXNASPYFALFKRNPDYKF 705
Score = 46.2 bits (108), Expect(2) = 2e-88
Identities = 24/80 (30%), Positives = 47/80 (58%)
Frame = -1
Query: 1979 DGSNYLIWKNQFESVLITTDLFEMVDGTSVQPYETIDLDGETLPNPLFLHWRKMNRFVML 1800
D +NY++W++Q ++V+ + +DGTSV P + + GE NP F+ R+ +R ++
Sbjct: 38 DRTNYILWRSQIDNVIFANGFEDFIDGTSVCPEKEL-RPGEI--NPAFVAXRRQDRTILS 94
Query: 1799 CLNATLDETISRGIIGFSTA 1740
+ ++L I IIG +++
Sbjct: 95 WIYSSLTPGIMAQIIGHNSS 114
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 299 bits (766), Expect(2) = 2e-87
Identities = 205/618 (33%), Positives = 303/618 (49%), Gaps = 43/618 (6%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W+ L + F AR LR + K+G ++ Y ++K I+D+ AA+GE V E D +
Sbjct: 115 WMALHKIFSASSKARIMQLRLEFQTTKKGGDAMLDYILKMKTISDNLAAVGEPVKERDHI 174
Query: 1551 MYALTGLGKEYMQFVISAKNRETVFSLNEVMSRLLHHEQWLKAEEAETT----------S 1402
+ L GLG +Y V S RE SL+ V S LL HEQ L + + T S
Sbjct: 175 LQLLGGLGPDYNSIVASLTAREDDLSLHSVHSILLTHEQRLHLQHSSPTDPSFASAHMAS 234
Query: 1401 VIDXXXXXXXXXXXXXXXSR-----SKSDNR-----------NTNTVNDF--------SQ 1294
V SR S S NR N + + ++
Sbjct: 235 VPSRQPNRPHQPRHYHHPSRPQHQASSSSNRPPTRFHPQQPRNNHPIPSAHNKPHHLSTR 294
Query: 1293 VECQICKKKGHTANRCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSA 1114
+CQ+C K GHTA +C+ R+ N Q F+ + +A
Sbjct: 295 PQCQLCGKFGHTAIKCYHRFDIN---------------YQGNNGVPLAQAPFSHAMLAAA 339
Query: 1113 EVTNSDPNIVSVWLPHSGDTNHITKDAHLLT--QDYSGSDKVMVGDGTFLPIEKICNIVL 940
P+ W +G T+H++ A L+ Q YSG+D+V +GDG LPI
Sbjct: 340 ------PDHQDSWFFDTGATHHLSHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSF 393
Query: 939 DTNTSQFQLDDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKIK 760
+ F L+ VL+VP + NL+S++KF DN V E + +K T+++L +G ++
Sbjct: 394 FFPSKTFSLNQVLHVPHLSTNLISVSKFXTDNAVFFEXHSSCFFVKDQVTKKILLKGWLR 453
Query: 759 NNLYPMEGITSFALTATTIPTAFTSKTS---NALWHRRLGHTTALSLKKIASTSS----I 601
+ LY ++++ P AF + S A+WH RLGH L K ++ + +
Sbjct: 454 DGLYEF--------SSSSPPRAFVTTGSFSDGAIWHSRLGHPAVPILSKALASCNPSVTL 505
Query: 600 QLDSTDECLSEACQMGKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFI 421
Q++ C+ C + K+H LP LS S PL LIH D+WGPAP+TS G +Y+++FI
Sbjct: 506 QINKIAPCI--ICPLAKSHSLPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFI 563
Query: 420 DDYSRYH*IYPFKCRTKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKS 241
DDYSR+ IY + ++L F F+ EN L +IK Q D E + FK +L+
Sbjct: 564 DDYSRHTWIYFLSTKDQALQSFITFRKMVENQLQTTIKCIQSDNGGEFLA--FKPYLEAH 621
Query: 240 GILYRVSCPHLHQQNGLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTK 61
GIL++ SCPH QQNG AERK +++ E G L Q+ LP +W +F T+ Y+IN LP K
Sbjct: 622 GILHQFSCPHTPQQNGRAERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAK 681
Query: 60 VLHFQSPYEVLFNTLPDY 7
+LHFQSP + LF+ LP+Y
Sbjct: 682 LLHFQSPTQTLFHKLPNY 699
Score = 53.9 bits (128), Expect(2) = 2e-87
Identities = 27/85 (31%), Positives = 49/85 (57%)
Frame = -1
Query: 1988 LREDGSNYLIWKNQFESVLITTDLFEMVDGTSVQPYETIDLDGETLPNPLFLHWRKMNRF 1809
++ D SNY++WK Q E+V+ + ++GT P + + G+ NP F+ WR+ +R
Sbjct: 32 IKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPPKELPT-GDL--NPDFVQWRRFDRM 88
Query: 1808 VMLCLNATLDETISRGIIGFSTARQ 1734
V+ + +TL+ I I+GF T+ +
Sbjct: 89 VLSWMYSTLNPDIMGQIVGFQTSHE 113
>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
Length = 1334
Score = 299 bits (766), Expect(2) = 2e-87
Identities = 206/618 (33%), Positives = 303/618 (49%), Gaps = 43/618 (6%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W+ L + F AR LR + K+G ++ Y ++K I+D+ AA+GE V E D +
Sbjct: 115 WMALHKIFSASSKARIMQLRLEFQTTKKGGDAMLDYILKMKTISDNLAAVGEPVKERDHI 174
Query: 1551 MYALTGLGKEYMQFVISAKNRETVFSLNEVMSRLLHHEQWLKAEE----------AETTS 1402
+ L GLG +Y V S RE SL+ V S LL HEQ L + A S
Sbjct: 175 LQLLGGLGPDYNSIVASLTAREDDLSLHSVHSILLTHEQRLHLQHSSPTDPSFASAHMAS 234
Query: 1401 VIDXXXXXXXXXXXXXXXSR-----SKSDNR-----------NTNTVNDF--------SQ 1294
SR S S NR N + + ++
Sbjct: 235 XPSRQPNRPHQPRHYHHPSRPQHQASSSSNRPPTRFHPQQPRNNHPIPSAHNKPHHLSTR 294
Query: 1293 VECQICKKKGHTANRCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSA 1114
+CQ+C K GHTA +C+ R+ N L QA + + +A
Sbjct: 295 PQCQLCGKFGHTAIKCYHRFDIN----------------YQGNNGVPLAQAPFSHAMXAA 338
Query: 1113 EVTNSDPNIVSVWLPHSGDTNHITKDAHLLT--QDYSGSDKVMVGDGTFLPIEKICNIVL 940
+ D W +G T+H++ A L+ Q YSG+D+V +GDG LPI
Sbjct: 339 APDHQDS-----WFFDTGATHHLSHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSF 393
Query: 939 DTNTSQFQLDDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKIK 760
+ F L+ VL+VP + NL+S++KF DN V EF + +K T+++L +G ++
Sbjct: 394 FFPSKTFSLNQVLHVPHLSTNLISVSKFCTDNAVFFEFHSSCFFVKDQVTKKILLKGWLR 453
Query: 759 NNLYPMEGITSFALTATTIPTAFTSKTS---NALWHRRLGHTTALSLKKIASTSS----I 601
+ LY ++++ P AF + S A+WH RLGH L K ++ + +
Sbjct: 454 DGLYEF--------SSSSPPRAFVTTGSFSDGAIWHSRLGHPAVPILSKALASCNPSVTL 505
Query: 600 QLDSTDECLSEACQMGKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFI 421
Q++ C+ C + K+H LP LS S PL LIH D+WGPAP+TS G +Y+++FI
Sbjct: 506 QINKIAPCI--ICPLAKSHSLPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFI 563
Query: 420 DDYSRYH*IYPFKCRTKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKS 241
DDYSR+ IY + ++L F F+ EN L +IK Q D E + FK +L+
Sbjct: 564 DDYSRHTWIYFLSTKDQALQSFITFRKMVENQLQTTIKCIQSDNGGEFLA--FKPYLEAH 621
Query: 240 GILYRVSCPHLHQQNGLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTK 61
GIL++ SCPH QQNG AERK +++ E G L Q+ LP +W +F T+ Y+IN LP K
Sbjct: 622 GILHQFSCPHTPQQNGRAERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAK 681
Query: 60 VLHFQSPYEVLFNTLPDY 7
+LHFQSP + LF+ LP+Y
Sbjct: 682 LLHFQSPTQTLFHKLPNY 699
Score = 53.9 bits (128), Expect(2) = 2e-87
Identities = 27/85 (31%), Positives = 49/85 (57%)
Frame = -1
Query: 1988 LREDGSNYLIWKNQFESVLITTDLFEMVDGTSVQPYETIDLDGETLPNPLFLHWRKMNRF 1809
++ D SNY++WK Q E+V+ + ++GT P + + G+ NP F+ WR+ +R
Sbjct: 32 IKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPPKELPT-GDL--NPDFVQWRRFDRM 88
Query: 1808 VMLCLNATLDETISRGIIGFSTARQ 1734
V+ + +TL+ I I+GF T+ +
Sbjct: 89 VLSWMYSTLNPDIMGQIVGFQTSHE 113
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 322 bits (824), Expect = 1e-84
Identities = 206/614 (33%), Positives = 307/614 (50%), Gaps = 31/614 (5%)
Frame = -3
Query: 1752 VLNCSTD---WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAI 1582
V N ST WV L F + AR+ LR L L + K S Y E K I D+ ++I
Sbjct: 99 VHNLSTSRQIWVSLAENFNKSSVAREFSLRQNLQLLSKKEKPFSVYCREFKTICDALSSI 158
Query: 1581 GETVDESDVVMYALTGLGKEY---MQFVISAKNRETVFSLNEVMSRLLHHEQWLKAEEAE 1411
G+ VDES + L GLG++Y + S+ ++ + N+V+S + + L++ E E
Sbjct: 159 GKPVDESMKIFGFLNGLGRDYDPITTVIQSSLSKLPTPTFNDVVSEVQGFDSKLQSYE-E 217
Query: 1410 TTSVIDXXXXXXXXXXXXXXXSRSKSDNRNTNTVND-----------FSQVE-------- 1288
SV R + N FSQ +
Sbjct: 218 AASVTPHLAFNIERSESGSPQYNPNQKGRGRSGQNKGRGGYSTRGRGFSQHQSSPQVSGP 277
Query: 1287 ---CQICKKKGHTANRCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINS 1117
CQIC + GHTA +C+ R+ N QAF+ + ++
Sbjct: 278 RPVCQICGRTGHTALKCYNRFDNNYQAEI---------------------QAFSTLRVSD 316
Query: 1116 AEVTNSDPNIVSVWLPHSGDTNHITKDAHLLTQ--DYSGSDKVMVGDGTFLPIEKICNIV 943
+ W P S T H+T + L +Y G D V+VGDGT+LPI +
Sbjct: 317 --------DTGKEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTT 368
Query: 942 LDTNTSQFQLDDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKI 763
+ ++ + L++VL VP I+++LLS++K D V F + I ++T++V+ G
Sbjct: 369 IKSSNGKIPLNEVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPR 428
Query: 762 KNNLYPMEGITSFALTATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTSSIQLD-ST 586
+N LY +E AL + A + +WH RLGH + +L+ + ++ +IQ++ S
Sbjct: 429 RNGLYVLENQEFVALYSNRQCAA-----TEEVWHHRLGHANSKALQHLQNSKAIQINKSR 483
Query: 585 DECLSEACQMGKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSR 406
+ E CQMGK+ +LP +S PL IHCD+WGP+P S+ G KYY +F+DDYSR
Sbjct: 484 TSPVCEPCQMGKSSRLPFLISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSR 543
Query: 405 YH*IYPFKCRTKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYR 226
Y YP +++ L+ F F+ EN L+ IK FQ DG E V + K L + GI +R
Sbjct: 544 YSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHR 603
Query: 225 VSCPHLHQQNGLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVLHFQ 46
+SCP+ QQNGLAERKH+++ E+G ++ F + P+ FW +SF T++YIINRLP+ VL
Sbjct: 604 ISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNL 663
Query: 45 SPYEVLFNTLPDYS 4
SPYE LF PDYS
Sbjct: 664 SPYEALFGEKPDYS 677
>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1402
Score = 320 bits (820), Expect = 3e-84
Identities = 205/619 (33%), Positives = 308/619 (49%), Gaps = 36/619 (5%)
Frame = -3
Query: 1752 VLNCSTD---WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAI 1582
V+NC+T W+ + F + +R L+ +L + + +KS+ Y +LK I D A++
Sbjct: 98 VVNCNTSHEVWISVANHFNRVSSSRLFELQRRLQNVSKRDKSMDEYLKDLKTICDQLASV 157
Query: 1581 GETVDESDVVMYALTGLGKEYMQFVISAKNRETVF---SLNEVMSRLLHHEQWLKAEEAE 1411
G V E + AL GLG+EY + +N SL +V+ +L ++ L+ E
Sbjct: 158 GSPVTEKMKIFAALNGLGREYEPIKTTIENSMDALPGPSLEDVIPKLTGYDDRLQGYLEE 217
Query: 1410 TT---------SVIDXXXXXXXXXXXXXXXSRSK------------------SDNRNTNT 1312
T + D +S S N ++ +
Sbjct: 218 TAVSPHVAFNITTSDDSNASGYFNAYNRGKGKSNRGRNSFSTRGRGFHQQISSTNSSSGS 277
Query: 1311 VNDFSQVECQICKKKGHTANRCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAA 1132
+ + V CQIC K GH A +C R+ L +A AA
Sbjct: 278 QSGGTSVVCQICGKMGHPALKCWHRF-------------------NNSYQYEELPRALAA 318
Query: 1131 IHINSAEVTNSDPNIVSVWLPHSGDTNHITKDAHLL--TQDYSGSDKVMVGDGTFLPIEK 958
+ I ++T+ N WLP S T H+T L +Q Y GSD VMV DG FLPI
Sbjct: 319 MRIT--DITDQHGN---EWLPDSAATAHVTNSPRSLQQSQPYHGSDAVMVADGNFLPITH 373
Query: 957 ICNIVLDTNTSQFQLDDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVL 778
+ L +++ L DVL P+I ++LLS++K T+D +VEF I T+++L
Sbjct: 374 TGSTNLASSSGNVPLTDVLVCPSITKSLLSVSKLTQDYPCTVEFDSDGVRINDKATKKLL 433
Query: 777 AEGKIKNNLYPMEGITSFALTATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTSSIQ 598
G + LY ++ + F +T + S+ +WHRRLGH L+++ T+SI
Sbjct: 434 IMGSTCDGLYCLKDDSQFKAFFSTRQQS----ASDEVWHRRLGHPHPQVLQQLVKTNSIS 489
Query: 597 LDSTDECLSEACQMGKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFID 418
++ T + L EACQ+GK+ +LP S T++ PL +HCD+WGP+P TS GF+YY +FID
Sbjct: 490 INKTSKSLCEACQLGKSTRLPFVSSSFTSNRPLERVHCDLWGPSPITSVQGFRYYAVFID 549
Query: 417 DYSRYH*IYPFKCRTKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSG 238
YSR+ IYP K ++ F F EN L+ I FQCDG E V +F + L G
Sbjct: 550 HYSRFSWIYPLKLKSDFYNIFVAFHKLVENQLNHKISVFQCDGGGEFVNHKFLQHLQNHG 609
Query: 237 ILYRVSCPHLHQQNGLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKV 58
I +S PH QQNGLAERKH+++ E+G ++ FQ+ +P FW ++F T++++IN LPT
Sbjct: 610 IQQHISYPHTPQQNGLAERKHRHLVELGLSMLFQSKVPLKFWVEAFFTANFLINLLPTSA 669
Query: 57 LHFQ-SPYEVLFNTLPDYS 4
+ SPYE L T PDY+
Sbjct: 670 VEDAISPYEKLHQTTPDYT 688
>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
Length = 1453
Score = 287 bits (735), Expect(2) = 7e-84
Identities = 192/583 (32%), Positives = 282/583 (48%), Gaps = 8/583 (1%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W+ LE F + ++ L +KRG +S++ Y K + D A+G +VD++D V
Sbjct: 104 WLALENSFSHISKTCELRIKDDLQLIKRGTRSVTEYSRSFKALCDQLTAMGRSVDDTDKV 163
Query: 1551 MYALTGLGKEYMQFVISAKNRETVFSLNEVMSRLLHHEQWLKAEEAETTSVIDXXXXXXX 1372
+ L GLG ++ F + + + +++ + AE+ +
Sbjct: 164 HWYLRGLGADFANFSTAQMSLTPLPVFKDLVPK------------AESFEIFQKSLGSSF 211
Query: 1371 XXXXXXXXSRSKSDNRNTNTVNDFSQVECQICKKKGHTANRCHFRYIPNKVXXXXXXXXX 1192
SR T T CQICK +GHTA+RC RY
Sbjct: 212 PFLQVPSFSRWLPWRPWTWTFP-----RCQICKTEGHTADRCRSRY-------------- 252
Query: 1191 XXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNIVSVWLPHSGDTNHITKDAHLL--TQ 1018
L +AF + ++N S W +G + H+T D L +
Sbjct: 253 -----DRAEPTAQLAEAFTT----TCSLSNGSE---SDWFTDTGASAHMTPDPSQLDKVE 300
Query: 1017 DYSGSDKVMVGDGTFLPIEKICNIVLDTNTSQFQLDDVLYVPTIKQNLLSITKFTKDNKV 838
Y G D V+VG+G LPI + +++S QL DVL VP + +NLLSI+K T D +
Sbjct: 301 PYHGKDCVIVGNGASLPITHTGTL---SSSSNLQLLDVLVVPRLTKNLLSISKLTSDFPL 357
Query: 837 SVEFFEWRYEIKCVRTRRVLAEGKIKNNLYPME-GITSFALTATTIPTAFTSKTSNA--- 670
SV F + ++ T +A+GK LY +E G ++FA + +K +A
Sbjct: 358 SVTFSHDNFVVQNRITGMAVAKGKRAGGLYVLERGHSAFA-------SVLRNKNLHASFE 410
Query: 669 LWHRRLGHTTALSLKKIASTSSIQLDST--DECLSEACQMGKNHKLPLFLSKRTTSTPLH 496
LWH RLGH L + + L S L CQ+ K+H+LP + ++ L
Sbjct: 411 LWHARLGHVNHSILSLLNKKGQLFLTSLLPTPSLCSTCQLAKSHRLPFSSNTTRSNVVLG 470
Query: 495 LIHCDIWGPAPTTSSLGFKYYILFIDDYSRYH*IYPFKCRTKSLACFQHFKNTTENILSA 316
L+HCDIWG AP S+LGF YY+LFIDDYSR+ +YP K ++ F F+ EN S
Sbjct: 471 LVHCDIWGLAPVKSNLGFNYYVLFIDDYSRFTWLYPLKLKSDFFDIFLQFQKLVENQYST 530
Query: 315 SIKFFQCDGALELVKGQFKEFLDKSGILYRVSCPHLHQQNGLAERKHKYITEMGNTLSFQ 136
IK FQ DG E +F+ L + GI +++SCP+ QNG AERKH+++TE G L F
Sbjct: 531 KIKIFQSDGGAEFTSNRFQSHLQQFGIHHQMSCPYTPSQNGRAERKHRHVTETGLALLFH 590
Query: 135 ASLPKYFWNDSFLTSSYIINRLPTKVLHFQSPYEVLFNTLPDY 7
+ +P +W D+F T++YIINRLP VL SP+EVLF P+Y
Sbjct: 591 SHVPPRYWVDAFSTATYIINRLPLPVLGGLSPFEVLFGKSPNY 633
Score = 53.9 bits (128), Expect(2) = 7e-84
Identities = 27/96 (28%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = -1
Query: 1994 VKLREDGSNYLIWKNQFESVLITTDLFEMVDGTSVQPYETIDLD-GETLPNPLFLHWRKM 1818
+ ++ +NYL+W+NQ +L +L VDG+ P TI +D + PNP ++ W+
Sbjct: 15 ITIKLSSTNYLLWRNQLLPLLQCQNLLSHVDGSVAPPPITIAVDSSSSQPNPQYVAWQLQ 74
Query: 1817 NRFVMLCLNATLDETISRGIIGFSTARQIGFILKGN 1710
++ ++ L ++L E ++G +TAR + L+ +
Sbjct: 75 DQRLLSLLFSSLTEEAMTEVLGLTTARDVWLALENS 110
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 316 bits (810), Expect = 4e-83
Identities = 205/615 (33%), Positives = 314/615 (51%), Gaps = 32/615 (5%)
Frame = -3
Query: 1752 VLNCSTD---WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAI 1582
V+NC T W+ L F + +R L+ +L L++ + ++ + +LK I D A++
Sbjct: 97 VVNCFTSHQVWLTLANHFNRVSSSRLFELQRRLQTLEKKDNTMEVFLKDLKHICDQLASV 156
Query: 1581 GETVDESDVVMYALTGLGKEYMQFVISAKNR---ETVFSLNEVMSRLLHHEQWLKAEEAE 1411
G V E + AL GLG+EY + +N SL+EV S+L ++ L++ E
Sbjct: 157 GSPVPEKMKIFSALNGLGREYEPIKTTIENSVDSNPSLSLDEVASKLRGYDDRLQSYVTE 216
Query: 1410 TT-SVIDXXXXXXXXXXXXXXXSRSKSDNRNTNTVNDFSQ-------------------- 1294
T S +R K + + + + FS
Sbjct: 217 PTISPHVAFNVTHSDSGYYHNNNRGKGRSNSGSGKSSFSTRGRGFHQQISPTSGSQAGNS 276
Query: 1293 -VECQICKKKGHTANRCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINS 1117
+ CQIC K GH A +C R+ L A A + I
Sbjct: 277 GLVCQICGKAGHHALKCWHRF-------------------DNSYQHEDLPMALATMRIT- 316
Query: 1116 AEVTNSDPNIVSVWLPHSGDTNHITKDAHLL--TQDYSGSDKVMVGDGTFLPIEKICNIV 943
+VT+ + W+P S + H+T + H+L +Q Y GSD +MV DG FLPI +
Sbjct: 317 -DVTDHHGH---EWIPDSAASAHVTNNRHVLQQSQPYHGSDSIMVADGNFLPITHTGSGS 372
Query: 942 LDTNTSQFQLDDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKI 763
+ +++ + L +VL P I ++LLS++K T D SVEF I T+++L G+
Sbjct: 373 IASSSGKIPLKEVLVCPDIVKSLLSVSKLTSDYPCSVEFDADSVRINDKATKKLLVMGRN 432
Query: 762 KNNLYPMEGITSFALTATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTSSIQL-DST 586
++ LY +E L +T +A S+ +WHRRLGH A L ++AS+ SI + +
Sbjct: 433 RDGLYSLEEPKLQVLYSTRQNSA-----SSEVWHRRLGHANAEVLHQLASSKSIIIINKV 487
Query: 585 DECLSEACQMGKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSR 406
+ + EAC +GK+ +LP LS S PL IHCD+WGP+PT+S GF+YY++FID YSR
Sbjct: 488 VKTVCEACHLGKSTRLPFMLSTFNASRPLERIHCDLWGPSPTSSVQGFRYYVVFIDHYSR 547
Query: 405 YH*IYPFKCRTKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYR 226
+ YP K ++ + F F+ EN L IK FQCDG E + QF + L GI
Sbjct: 548 FTWFYPLKLKSDFFSTFVMFQKLVENQLGHKIKIFQCDGGGEFISSQFLKHLQDHGIQQN 607
Query: 225 VSCPHLHQQNGLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVL-HF 49
+SCP+ QQNG+AERKH++I E+G ++ FQ+ LP +W +SF T++++IN LPT L +
Sbjct: 608 MSCPYTPQQNGMAERKHRHIVELGLSMIFQSKLPLKYWLESFFTANFVINLLPTSSLDNN 667
Query: 48 QSPYEVLFNTLPDYS 4
+SPY+ L+ P+YS
Sbjct: 668 ESPYQKLYGKAPEYS 682
>emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]
Length = 1394
Score = 285 bits (729), Expect(2) = 2e-82
Identities = 197/622 (31%), Positives = 297/622 (47%), Gaps = 47/622 (7%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W+ L + F AR LR + K+G + Y ++K I+++ AAIGE V E+D +
Sbjct: 114 WMALHKIFSASSKARILQLRLEFQTTKKGADPMLEYILKIKTISNNLAAIGEPVKETDHI 173
Query: 1551 MYALTGLGKEYMQFVISAKNRETVFSLNEVMSRLL------------------------- 1447
+ L GLG EY V S RE SL+ V S LL
Sbjct: 174 LQLLGGLGSEYNSIVASLTAREDDLSLHSVHSILLTHEQCLNHQHTSSVDLPFAAAHIAA 233
Query: 1446 ---------HHEQWLKAEEAETTSVIDXXXXXXXXXXXXXXXSRSKSDNRNTNTVNDF-- 1300
HH ++ + + ++ NR++++
Sbjct: 234 APSTQHPKPHHPRFQSPQPRFQSHYSGNHQHVXFSHTRPHNRPHNRPANRSSSSAPHRPP 293
Query: 1299 ---SQVECQICKKKGHTANRCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAI 1129
++ +CQ+C K GHT +C+ + LQ AA
Sbjct: 294 HLPTRPQCQLCGKFGHTVVKCYHXF---------DITYQGTNGVSSSQDSSPLQAMLAAT 344
Query: 1128 HINSAEVTNSDPNIVSVWLPHSGDTNHITKDAHLLT--QDYSGSDKVMVGDGTFLPIEKI 955
PN W +G T+H++ A L+ Q YSG+D+V +GDG LPI
Sbjct: 345 -----------PNHQYSWFFDTGATHHLSHSAQTLSHVQPYSGADQVTIGDGHSLPILNT 393
Query: 954 CNIVLDTNTSQFQLDDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLA 775
N ++ F L+ VL+VP + NL+S++KF DN V EF + +K T++ L
Sbjct: 394 GNKSFFFHSKVFCLNQVLHVPQLSTNLISVSKFCTDNAVFFEFHSTHFFVKDQVTKQTLL 453
Query: 774 EGKIKNNLY--PMEGITSFALTATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTS-- 607
+G +++ LY P T ++ +++P T A+WH RLGH L K ++
Sbjct: 454 KGWLRDGLYEFPSSSSTHAFVSTSSVPAL----TPGAIWHSRLGHPAXPILSKALASCNP 509
Query: 606 --SIQLDSTDECLSEACQMGKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYY 433
S Q++ C + C + K+H L LS S PL LIH D+WG AP+ S+ G Y+
Sbjct: 510 SVSFQINKIAPC--KICPLAKSHSLXYSLSSSHASQPLALIHTDLWGXAPSPSTSGAXYF 567
Query: 432 ILFIDDYSRYH*IYPFKCRTKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEF 253
+LFIDDYSRY IY + ++L+ F F+ EN L+++IK Q D E + FK +
Sbjct: 568 LLFIDDYSRYTWIYFLSTKDQALSTFITFRKMIENQLNSTIKCIQSDNGGEFIA--FKPY 625
Query: 252 LDKSGILYRVSCPHLHQQNGLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINR 73
L+ GI+++ SCPH QQNG AERK ++ E G L Q+ LP +W+ +F TS Y+IN
Sbjct: 626 LEAHGIVHQFSCPHTPQQNGRAERKICHLVETGMALLAQSFLPSKYWSFAFQTSVYLINL 685
Query: 72 LPTKVLHFQSPYEVLFNTLPDY 7
LP K+L+FQSP +VLF+ +P+Y
Sbjct: 686 LPAKLLNFQSPLQVLFHKIPNY 707
Score = 51.6 bits (122), Expect(2) = 2e-82
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = -1
Query: 1988 LREDGSNYLIWKNQFESVLITTDLFEMVDGTSVQPYETIDLDGETLPNPLFLHWRKMNRF 1809
++ D +NY++WK Q E+V+ E +D T P + + GE NP F+ WR+ +R
Sbjct: 31 IKLDRNNYILWKTQMENVVYANGFEEYIDDTKPCPPQELHT-GEL--NPDFVQWRRFDRM 87
Query: 1808 VMLCLNATLDETISRGIIGFSTA 1740
V+ L + L I IIGF T+
Sbjct: 88 VLSWLYSMLTPDIMGQIIGFQTS 110
>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
putative protein [Arabidopsis thaliana]
Length = 1415
Score = 310 bits (795), Expect = 2e-81
Identities = 196/582 (33%), Positives = 295/582 (50%), Gaps = 6/582 (1%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W L +++ + +RKS L+ +L+ + + KS+ Y + +K I D +IG V E++ +
Sbjct: 109 WFSLAKKYNRVSASRKSDLQRRLNPVSKNEKSMLEYLNCVKQICDQLDSIGCPVPENEKI 168
Query: 1551 MYALTGLGKEYMQFVISAKNRETVF--SLNEVMSRLLHHEQWLK-AEEAETTSVIDXXXX 1381
L GLG+EYM K + S +V+ +L++ + L+ + +
Sbjct: 169 FGVLNGLGQEYMLVSTMIKGSMDTYPMSFEDVVFKLINFDDKLQNGQSGGNRGRNNYTTK 228
Query: 1380 XXXXXXXXXXXSRSKSDNRNTNTVNDFSQVECQICKKKGHTANRCHFRYIPNKVXXXXXX 1201
S S S R T CQIC K GH+A +C R+
Sbjct: 229 GRGFPQQISSGSPSDSGTRPT----------CQICNKYGHSAYKCWKRF----------- 267
Query: 1200 XXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNIVSVWLPHSGDTNHITKDAHLL- 1024
+AFAA+ ++ + S+P W+ SG T+HIT L
Sbjct: 268 --------DHAFQSEDFSKAFAAMRVSDQK---SNP-----WVTDSGATSHITNSTSQLQ 311
Query: 1023 -TQDYSGSDKVMVGDGTFLPIEKICNIVLDTNTSQFQLDDVLYVPTIKQNLLSITKFTKD 847
Q YSG D V+VG+ FLPI I + VL +N L DVL P I ++LLS++K T D
Sbjct: 312 SAQPYSGEDSVIVGNSDFLPITHIGSAVLTSNQGNLPLRDVLVCPNITKSLLSVSKLTSD 371
Query: 846 NKVSVEFFEWRYEIKCVRTRRVLAEGKIKNNLYPMEGITSFALTATTIPTAFTSKTSNAL 667
+EF +K T+++L +G N+LY +E A ++ TS+ +
Sbjct: 372 YPCVIEFDSDGVIVKDKLTKQLLTKGTRHNDLYLLENPKFMACYSSR-----QQATSDEV 426
Query: 666 WHRRLGHTTALSLKKIASTSSIQLDSTDECLSEACQMGKNHKLPLFLSKRTTSTPLHLIH 487
WH RLGH L+++ +I + T L +ACQMGK KLP S +S L +H
Sbjct: 427 WHMRLGHPNQDVLQQLLRNKAIVISKTSHSLCDACQMGKICKLPFASSDFVSSRLLERVH 486
Query: 486 CDIWGPAPTTSSLGFKYYILFIDDYSRYH*IYPFKCRTKSLACFQHFKNTTENILSASIK 307
CD+WGPAP SS GF+YY++FID+YSR+ YP + ++ + F F+ EN I
Sbjct: 487 CDLWGPAPVVSSQGFRYYVIFIDNYSRFTWFYPLRLKSDFFSVFLTFQKMVENQCQQKIA 546
Query: 306 FFQCDGALELVKGQFKEFLDKSGILYRVSCPHLHQQNGLAERKHKYITEMGNTLSFQASL 127
FQCDG E + QF L + GI +SCP+ QQNG+AERKH++ITE+G+++ FQ +
Sbjct: 547 SFQCDGGGEFISNQFVSHLAECGIRQLISCPYTPQQNGIAERKHRHITELGSSMMFQGKV 606
Query: 126 PKYFWNDSFLTSSYIINRLPTKVLHFQ-SPYEVLFNTLPDYS 4
P++ W ++F TS+++ N LP+ VL Q SPYEVL P Y+
Sbjct: 607 PQFLWVEAFYTSNFLCNLLPSSVLKDQKSPYEVLMGKAPVYT 648
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 310 bits (794), Expect = 3e-81
Identities = 202/599 (33%), Positives = 289/599 (48%), Gaps = 24/599 (4%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W L+ +F + +R S L+ QL L +G KS S Y + K + D AA G+ VD+ D++
Sbjct: 107 WTALQTRFSSQSRSRISHLKRQLQTLTQGTKSCSEYLESAKTLADQLAAAGKPVDDQDLI 166
Query: 1551 MYALTGLGKEYMQFVISAK--NRETVFSLNEVMSRLLHHEQWLKAEE------------- 1417
+ L GL Y FV S +RET F+ + + LL +E L
Sbjct: 167 SFLLGGLQSSYTPFVTSFNFASRETDFTFEDFQAELLGYENLLDVNHSVHNTDGPHFAFA 226
Query: 1416 AETTSVIDXXXXXXXXXXXXXXXSRSKSDNRNTNTVNDFSQVE-----CQICKKKGHTAN 1252
A + + + S+ R+ T + SQ+ CQIC K GHTA
Sbjct: 227 ANKSKAPTYVQKKGPPLPPTKMQNAASSNYRSQQTRSTPSQLPNNRPVCQICGKSGHTAI 286
Query: 1251 RCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNIVSVWL 1072
C R+ + Q F + + + VW
Sbjct: 287 DCFHRF------------------------DYSYQGRFPPQDLAAMVAETNATFDHQVWY 322
Query: 1071 PHSGDTNHITKDAHLLT--QDYSGSDKVMVGDGTFLPIEKICNIVLDTNTSQFQLDDVLY 898
SG HIT DA LT Q + S+ V VG+G+ L + + + S F L+ +L+
Sbjct: 323 MDSGANAHITSDATNLTHQQPFCESETVTVGNGSGLQVLNTGSTTFNFGQSNFHLNKILH 382
Query: 897 VPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKIKNNLYPMEGITSFAL 718
P NL+SI +F DN + +K T R+L +G ++N LYP+ G +F
Sbjct: 383 CPQAATNLISINQFCLDNNCYFILTANGFVVKENLTGRILLQGVVENGLYPLAGCKTFHK 442
Query: 717 TATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTS--SIQLDSTDECLSEACQMGKNH 544
+ T + T + + WH RLGH +++ + ++ S++ ST ACQ+GK
Sbjct: 443 SLTCLSTTIGVRANADTWHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAK 502
Query: 543 KLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSRYH*IYPFKCRTKSL 364
+LP S R +S PL LIH D+W +P S+ G YY+LFIDDYSRY +YP ++
Sbjct: 503 QLPFPESSRQSSVPLALIHSDVW-VSPVQSTGGCSYYVLFIDDYSRYSWLYPLHRKSDVF 561
Query: 363 ACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYRVSCPHLHQQNGLAE 184
A F FK E + S SIK Q D E QFK+FL GI +R++CPH QQNG+ E
Sbjct: 562 ATFVKFKTIAEKLFSTSIKQIQTDNGGEFTSNQFKQFLTAQGIFHRLTCPHTSQQNGIVE 621
Query: 183 RKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVLHFQSPYEVLFNTLPDY 7
RKH++I EMG TL Q+SL +W D+FLTS ++INRLPTKVL +PY +L T P Y
Sbjct: 622 RKHRHIQEMGLTLLAQSSLSPQYWVDAFLTSVFLINRLPTKVLDNLTPYFLLHKTEPTY 680
>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7267767|emb|CAB81170.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1515
Score = 308 bits (790), Expect = 9e-81
Identities = 198/604 (32%), Positives = 294/604 (48%), Gaps = 28/604 (4%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W+ L R+F + RK L+ +L + K++ Y E+K I D +IG V E + +
Sbjct: 105 WLGLARRFNRFSTTRKYDLQKRLGTCSKAGKTMDAYLSEVKNICDQLDSIGFPVTEQEKI 164
Query: 1551 MYALTGLGKEYMQFVISAKNRETVFS---LNEVMSRLLHHEQWLKAEEAETT-------- 1405
L GLGKEY ++ V+ ++V+ +L + L A +
Sbjct: 165 FGVLNGLGKEYESIATVIEHSLDVYPGPCFDDVVYKLTTFDDKLSTYTANSEVTPHLAFY 224
Query: 1404 ---SVIDXXXXXXXXXXXXXXXSRSKSDNR-----------NTNTVNDFSQVECQICKKK 1267
S R +R + N + S+ CQIC+K
Sbjct: 225 TDKSYSSRGNNNSRGGRYGNFRGRGSYSSRGRGFHQQFGSGSNNGSGNGSKPTCQICRKY 284
Query: 1266 GHTANRCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNI 1087
GH+A +C+ R+ N + L AFAA+ ++ +S
Sbjct: 285 GHSAFKCYTRFEENYLPED-------------------LPNAFAAMRVSDQNQASSHE-- 323
Query: 1086 VSVWLPHSGDTNHITKDAHLL--TQDYSGSDKVMVGDGTFLPIEKICNIVLDTNTSQFQL 913
WLP S T HIT L +Q YSG D V+VG+G FLPI I I L+ + L
Sbjct: 324 ---WLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLPITHIGTIPLNISQGTLPL 380
Query: 912 DDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKIKNNLYPMEGI 733
+DVL P I ++LLS++K T D S F IK RT+++L +G LY ++ +
Sbjct: 381 EDVLVCPGITKSLLSVSKLTDDYPCSFTFDSDSVVIKDKRTQQLLTQGNKHKGLYVLKDV 440
Query: 732 TSFALTATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTSSIQLDSTDECLSEACQMG 553
+T + + +WH+RLGH L+ + T +I ++ T + EACQMG
Sbjct: 441 PFQTYYSTR-----QQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSNMCEACQMG 495
Query: 552 KNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSRYH*IYPFKCRT 373
K +LP S+ +S PL IHCD+WGPAP TS+ GF+YY++FID+YSR+ YP K ++
Sbjct: 496 KVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDNYSRFTWFYPLKLKS 555
Query: 372 KSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYRVSCPHLHQQNG 193
+ F F+ EN I FQCDG E V +F L GI +SCPH QQNG
Sbjct: 556 DFFSVFVLFQQLVENQYQHKIAMFQCDGGGEFVSYKFVAHLASCGIKQLISCPHTPQQNG 615
Query: 192 LAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVL-HFQSPYEVLFNTL 16
+AER+H+Y+TE+G +L F + +P W ++F TS+++ N LP+ L +SPYE+L T
Sbjct: 616 IAERRHRYLTELGLSLMFHSKVPHKLWVEAFFTSNFLSNLLPSSTLSDNKSPYEMLHGTP 675
Query: 15 PDYS 4
P Y+
Sbjct: 676 PVYT 679
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 281 bits (718), Expect(2) = 2e-80
Identities = 184/597 (30%), Positives = 288/597 (48%), Gaps = 22/597 (3%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W L + + ++ LR Q+ K+ KSI +F L + D A +G+ ++ + +
Sbjct: 211 WTKLMDTYAKPSWSHIQQLRQQIKQWKKDTKSIDEFFQGLVMRFDQLALLGKPMESEEQM 270
Query: 1551 MYALTGLGKEYMQFVISAKNRETVFSLNEVMSRLLHHEQWLKAEEAETTSVIDXXXXXXX 1372
+ GL +Y Q + + RE SL E+ +LL+HE L+A + +
Sbjct: 271 EVIVEGLSDDYKQVIDQIQGREVPPSLTEIHEKLLNHEVKLQAAASSLPISANAASYRPP 330
Query: 1371 XXXXXXXXSRSKSDNRNTNT--VNDFSQV------------ECQICKKKGHTANRCHFRY 1234
+ + NRN N N + Q +CQIC GH+A RC
Sbjct: 331 ANNKHNNSNNYRGQNRNNNNRGANSYQQPRNDQPSSRGYQGKCQICGVFGHSARRC---- 386
Query: 1233 IPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNIVSVWLPHSGDT 1054
+++ + AA+ N WL SG T
Sbjct: 387 --SQLQMSGAYSTPSPSQYPNATVPWQPRANMAAMSYNP-------------WLLDSGAT 431
Query: 1053 NHITKDAHLLT--QDYSGSDKVMVGDGTFLPIEKICNIVLDTNTSQFQLDDVLYVPTIKQ 880
+H+T D + L Q Y+G ++V + DG+ LPI + L T + L+++LYVP + +
Sbjct: 432 HHLTTDLNNLALHQPYNGGEEVTIADGSTLPITHTGSSTLSTQSRSLALNNILYVPNLHK 491
Query: 879 NLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKIKNNLY--PMEGITSFALTATT 706
NL+S+ K NKVSVEFF +++K + T L +G+ K+ LY P+ T +L A+
Sbjct: 492 NLISVYKLCNANKVSVEFFPAHFQVKDLSTGARLLQGRTKDELYEWPVPSNTPISLFASP 551
Query: 705 IPTAFTSKTSNALWHRRLGHTTALSLKKIASTSSIQLDSTDE----CLSEACQMGKNHKL 538
P KT+ WH RLGH + LK + S S+ + ++ + C C + K+HKL
Sbjct: 552 TP-----KTTLPSWHSRLGHPSPPVLKSLVSQFSLPVSNSSQKHFPC--SHCLINKSHKL 604
Query: 537 PLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSRYH*IYPFKCRTKSLAC 358
P + + + TPL ++ D+W +P TS FKYY++ +D Y+RY +YP K +++
Sbjct: 605 PFYSNTIISYTPLEYVYSDVW-TSPVTSVDNFKYYLILVDHYTRYTWLYPLKQKSQVRET 663
Query: 357 FQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYRVSCPHLHQQNGLAERK 178
F FK EN I+ D E + ++FL GI + S PH + NG+AERK
Sbjct: 664 FVAFKALVENRFQTKIRTLYSDNGGEFIA--LRQFLLTHGISHLTSLPHTPEHNGIAERK 721
Query: 177 HKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVLHFQSPYEVLFNTLPDY 7
H++I E G TL QAS+P +W +F T+ Y+INRLP+ VL+ +SPY LF T P+Y
Sbjct: 722 HRHILETGLTLLTQASIPTSYWTYAFGTAVYLINRLPSSVLNNESPYSKLFKTSPNY 778
Score = 49.3 bits (116), Expect(2) = 2e-80
Identities = 23/81 (28%), Positives = 44/81 (54%)
Frame = -1
Query: 1973 SNYLIWKNQFESVLITTDLFEMVDGTSVQPYETIDLDGETLPNPLFLHWRKMNRFVMLCL 1794
SN+L+W+ Q +++L DL +DG+ V P TI +G NP F HW++ ++ + L
Sbjct: 130 SNFLMWRRQVQALLNGYDLTGYIDGSIVVPPATITANGAVTVNPAFKHWQRQDQLIYSAL 189
Query: 1793 NATLDETISRGIIGFSTARQI 1731
+ ++ + +T+ +I
Sbjct: 190 LGAISISVQPILSRTTTSAEI 210
>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1149
Score = 305 bits (781), Expect = 1e-79
Identities = 197/601 (32%), Positives = 300/601 (49%), Gaps = 25/601 (4%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W++L + F + +R L+ +LH+L + K++ Y LK I D A++G V E +
Sbjct: 105 WMNLAKHFNRISSSRIFELQRRLHSLSKEGKTMEEYLRYLKTICDQLASVGSPVAEKMKI 164
Query: 1551 MYALTGLGKEYMQFVISAKNRETVF---SLNEVMSRLLHHEQWLKAEEAETTSVIDXXXX 1381
+ GL +EY + S + F S +V+ RL + + L+ +V D
Sbjct: 165 FAMVHGLTREYEPLITSLEGTLDAFPGPSYEDVVYRLKNFDDRLQGY-----TVTDVSPH 219
Query: 1380 XXXXXXXXXXXSRSKSDNR------------------NTNTVNDFSQVECQICKKKGHTA 1255
R +NR ++++V+ + CQIC K+GH A
Sbjct: 220 LAFNTFRSSNRGRGGRNNRGKGNFSTRGRGFQQQFSSSSSSVSASEKPMCQICGKRGHYA 279
Query: 1254 NRCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNIVSVW 1075
+C R+ + AF+A+HI +D + S W
Sbjct: 280 LQCWHRFDDS------------------YQHSEAAAAAFSALHI-------TDVSDDSGW 314
Query: 1074 LPHSGDTNHITKDAHLLTQ--DYSGSDKVMVGDGTFLPIEKICNIVLDTNTSQFQLDDVL 901
+P S T HIT ++ L Q Y G+D VM DG FLPI I + L + + L DVL
Sbjct: 315 VPDSAATAHITNNSSRLQQMQPYLGNDTVMASDGNFLPITHIGSANLPSTSGNLPLKDVL 374
Query: 900 YVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGK-IKNNLYPMEGITSF 724
P I ++LLS++K TKD S F +K T +VL +G LY +E F
Sbjct: 375 VCPNIAKSLLSVSKLTKDYPCSFTFDADGVLVKDKATCKVLTKGSSTSEGLYKLEN-PKF 433
Query: 723 ALTATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTSSIQLDSTDECLSEACQMGKNH 544
+ +T K ++ +WH RLGH L+ +A+ +IQ++ + + E+C++GK+
Sbjct: 434 QMFYSTRQV----KATDEVWHMRLGHPNPQVLQLLANKKAIQINKSTSKMCESCRLGKSS 489
Query: 543 KLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSRYH*IYPFKCRTKSL 364
+LP S S PL +HCD+WGPAP +S GF+YY++FID+ SR+ YP K ++
Sbjct: 490 RLPFIASDFIASRPLERVHCDLWGPAPVSSIQGFQYYVIFIDNRSRFCWFYPLKHKSDFC 549
Query: 363 ACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYRVSCPHLHQQNGLAE 184
+ F F++ EN+L I FQ DG E +F + L +SGI + +SCPH QQNGLAE
Sbjct: 550 SLFMKFQSFVENLLQTKIGTFQSDGGGEFTSNRFLQHLQESGIQHYISCPHTPQQNGLAE 609
Query: 183 RKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVLHFQ-SPYEVLFNTLPDY 7
RKH+ +TE G TL FQ+ P+ FW ++F T++++ N LPT L +PY+VLF PDY
Sbjct: 610 RKHRQLTERGLTLMFQSKAPQRFWVEAFFTANFLSNLLPTSALDSSTTPYQVLFGKAPDY 669
Query: 6 S 4
S
Sbjct: 670 S 670
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 301 bits (770), Expect = 2e-78
Identities = 198/612 (32%), Positives = 289/612 (47%), Gaps = 37/612 (6%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W LE F AR LR +L + K+G+ S+ Y ++K D+ AAIGE V E D V
Sbjct: 121 WNALESIFSSSSRARIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQV 180
Query: 1551 MYALTGLGKEYMQFVISAKNRETVFSLNEVMSRLLHHEQWLKAE---EAETTSVIDXXXX 1381
M L GLG +Y V + R+ SL + S LL E L+ + E + +
Sbjct: 181 MNLLGGLGSDYNAVVTAINIRDDKISLEAIHSMLLAFEHRLEQQSSIEQMSANYASSSNN 240
Query: 1380 XXXXXXXXXXXSRSKSDNRNTNTV-----------------NDFSQVECQICKKKGHTAN 1252
+ S N N T + + +CQ+C K GHTA
Sbjct: 241 RGGGRKFNGGRGQGYSPNNNNYTYRGRGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQ 300
Query: 1251 RCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNIVSV-- 1078
C+ R+ Q + +N+ N + S
Sbjct: 301 ICYHRF----------------------DISFQGGQTTISHSLNNGNQNNIPAMVASASN 338
Query: 1077 ------WLPHSGDTNHITKDAHLLTQD--YSGSDKVMVGDGTFLPIEKICNIVLDTNTSQ 922
W SG ++H+T++ LT Y+G+DKV +G+G L I I + L ++T
Sbjct: 339 NPADESWYLDSGASHHLTQNLGNLTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHS 398
Query: 921 FQLDDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKIKNNLYPM 742
F+L V +VP I NL+S+ KF +N +EF + +K + T+ VLA+GK++N LY
Sbjct: 399 FRLKKVFHVPFISANLISVAKFCSENNALIEFHSNAFFVKDLHTKMVLAQGKLENGLYKF 458
Query: 741 EGIT-----SFALTATTIPTAFTSKTSNA--LWHRRLGHTTALSLKKIASTSSIQLDSTD 583
+ S A+ + F+S N LWH RLGH + + K+ +T ++
Sbjct: 459 PVFSNLKPYSSINNASAFHSQFSSTVENKAELWHNRLGHASFDIVSKVMNTCNVASGKYK 518
Query: 582 ECLSEACQMGKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSRY 403
+ CQ+ K+H+LP LS S PL L++ DIWGPA S+ G +Y+ILF+DDYSRY
Sbjct: 519 SFVCSDCQLAKSHRLPTQLSNFHASKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRY 578
Query: 402 H*IYPFKCRTKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYRV 223
Y + + ++L F+ FK EN IK Q D E F FL GI +R
Sbjct: 579 TWFYSLQTKDQALPIFKXFKLQMENQFDTKIKCLQSDNGGEF--RSFTSFLQAVGIAHRF 636
Query: 222 SCPHLHQQNGLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVLHFQS 43
SCP+ QNG ERKH+++ E G L ASLP +W+ +F T +++INR+P+KVL + S
Sbjct: 637 SCPYNSXQNGRVERKHRHVVETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDS 696
Query: 42 PYEVLFNTLPDY 7
PY LF PDY
Sbjct: 697 PYFTLFRRHPDY 708
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 300 bits (768), Expect = 3e-78
Identities = 193/604 (31%), Positives = 304/604 (50%), Gaps = 28/604 (4%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W+ L F + AR+ LR L L + +KS+S Y + K+I DS ++IG+ V+ES +
Sbjct: 109 WISLAENFNKSSIAREFSLRRNLQLLTKKDKSLSVYCRDFKIICDSLSSIGKPVEESMKI 168
Query: 1551 MYALTGLGKEY---MQFVISAKNRETVFSLNEVMSRLLHHEQWLKAEEAETTSVIDXXXX 1381
L GLG+EY + S+ ++ + N+V+S + + L++ + +T SV
Sbjct: 169 FGFLNGLGREYDPITTVIQSSLSKLPAPTFNDVISEVQGFDSKLQSYD-DTVSVNPHLAF 227
Query: 1380 XXXXXXXXXXXSRSKSDNRNTNTVN-----------DFSQVE-----------CQICKKK 1267
S S R + N FSQ + CQIC +
Sbjct: 228 NTERSNSGAPQYNSNSRGRGRSGQNRGRGGYSTRGRGFSQHQSASPSSGQRPVCQICGRI 287
Query: 1266 GHTANRCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNI 1087
GHTA +C+ R+ N QAF+A+ ++ + T +
Sbjct: 288 GHTAIKCYNRFDNNYQSEVPT-------------------QAFSALRVS--DETGKE--- 323
Query: 1086 VSVWLPHSGDTNHITKDAHLLTQ--DYSGSDKVMVGDGTFLPIEKICNIVLDTNTSQFQL 913
W P S T HIT L Y G+D V+VGDGT+LPI + + + ++ L
Sbjct: 324 ---WYPDSAATAHITASTSGLQNATTYEGNDAVLVGDGTYLPITHVGSTTISSSKGTIPL 380
Query: 912 DDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKIKNNLYPMEGI 733
++VL P I+++LLS++K D V F + I + T++V+++G N LY +E
Sbjct: 381 NEVLVCPAIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLTTQKVVSKGPRNNGLYMLENS 440
Query: 732 TSFALTATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTSSIQLD-STDECLSEACQM 556
AL + A S WH RLGH+ + L+++ + IQ++ S + E CQM
Sbjct: 441 EFVALYSNRQCAA-----SMETWHHRLGHSNSKILQQLLTRKEIQVNKSRTSPVCEPCQM 495
Query: 555 GKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSRYH*IYPFKCR 376
GK+ +L F S PL +HCD+WGP+P S+ GFKYY +F+DD+SR+ +P + +
Sbjct: 496 GKSTRLQFFSSDFRALKPLDRVHCDLWGPSPVVSNQGFKYYAVFVDDFSRFSWFFPLRMK 555
Query: 375 TKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYRVSCPHLHQQN 196
+K ++ F ++ EN L IK FQ DG E + KE + GI +R+SCP+ QQN
Sbjct: 556 SKFISVFIAYQKLVENQLGTKIKEFQSDGGGEFTSNKLKEHFREHGIHHRISCPYTPQQN 615
Query: 195 GLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVLHFQSPYEVLFNTL 16
G+AERKH+++ E+G ++ + + P FW ++F T++Y+ N LP+ VL SPYE LF
Sbjct: 616 GVAERKHRHLVELGLSMLYHSHTPLKFWVEAFFTANYLSNLLPSSVLKEISPYETLFQQK 675
Query: 15 PDYS 4
DY+
Sbjct: 676 VDYT 679
>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 298 bits (763), Expect = 1e-77
Identities = 190/604 (31%), Positives = 296/604 (49%), Gaps = 28/604 (4%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W+ L F + AR+ LR L L + +K++S Y E + D+ ++IG+ VDES +
Sbjct: 109 WISLAENFNKSSVAREFTLRRTLQLLSKKDKTLSAYCREFIAVCDALSSIGKPVDESMKI 168
Query: 1551 MYALTGLGKEY---MQFVISAKNRETVFSLNEVMS-------RLLHHEQWLKA------- 1423
L GLG+EY + S+ ++ + + +V+S +L +E+ + A
Sbjct: 169 FGFLNGLGREYDPITTVIQSSLSKISPPTFRDVISEVKGFDVKLQSYEESVTANPHMAFN 228
Query: 1422 -EEAETTSVIDXXXXXXXXXXXXXXXSRSKSDNRN-------TNTVNDFSQVECQICKKK 1267
+ +E T RS R TN+ N + CQIC +
Sbjct: 229 TQRSEYTDNYTSGNRGKGRGGYGQNRGRSGYSTRGRGFSQHQTNSNNTGERPVCQICGRT 288
Query: 1266 GHTANRCHFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNI 1087
GHTA +C+ R+ N QAF+++ ++ +
Sbjct: 289 GHTALKCYNRFDHN-------------------YQSVDTAQAFSSLRVSDSSGKE----- 324
Query: 1086 VSVWLPHSGDTNHITKDAHLL--TQDYSGSDKVMVGDGTFLPIEKICNIVLDTNTSQFQL 913
W+P S T H+T + L Y+GSD V+VGDG +LPI + + + +++ L
Sbjct: 325 ---WVPDSAATAHVTSSTNNLQAASPYNGSDTVLVGDGAYLPITHVGSTTISSDSGTLPL 381
Query: 912 DDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKIKNNLYPMEGI 733
++VL P I+++LLS++K D V F + I + T++V+++G N LY +E
Sbjct: 382 NEVLVCPDIQKSLLSVSKLCDDYPCGVYFDANKVCIIDINTQKVVSKGPRSNGLYVLENQ 441
Query: 732 TSFALTATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTSSIQLD-STDECLSEACQM 556
A + A S +WH RLGH+ + L+++ S+ I + S + E CQM
Sbjct: 442 EFVAFYSNRQCAA-----SEEIWHHRLGHSNSRILQQLKSSKEISFNKSRMSPVCEPCQM 496
Query: 555 GKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSRYH*IYPFKCR 376
GK+ KL F S L IHCD+WGP+P S GFKYY++F+DDYSRY YP K +
Sbjct: 497 GKSSKLQFFSSNSRELDLLGRIHCDLWGPSPVVSKQGFKYYVVFVDDYSRYSWFYPLKAK 556
Query: 375 TKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYRVSCPHLHQQN 196
+ A F F+N EN + IK FQ DG E K+ L GI +R+SCP+ QQN
Sbjct: 557 SDFFAVFVAFQNLVENQFNTKIKVFQSDGGGEFTSNLMKKHLTDCGIQHRISCPYTPQQN 616
Query: 195 GLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVLHFQSPYEVLFNTL 16
G+AERKH++ E+G ++ F + P FW ++F T+S++ N LP+ L SP E L
Sbjct: 617 GIAERKHRHFVELGLSMMFHSHTPLQFWVEAFFTASFLSNMLPSPSLGNVSPLEALLKQK 676
Query: 15 PDYS 4
P+Y+
Sbjct: 677 PNYA 680
>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 276 bits (705), Expect(2) = 3e-77
Identities = 191/604 (31%), Positives = 289/604 (47%), Gaps = 29/604 (4%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W L + + Y + LR+QL +G K+I Y D A +G+ +D + V
Sbjct: 110 WETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQV 169
Query: 1551 MYALTGLGKEYMQFVISAKNRETVFSLNEVMSRLLHHEQWLKA-EEAETTSVIDXXXXXX 1375
L L +Y + ++T SL E+ RL++ E L A AE +
Sbjct: 170 ERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINQESKLLALNSAEVVPIT--ANVVT 227
Query: 1374 XXXXXXXXXSRSKSDNRNTNTVNDFSQV--------------------ECQICKKKGHTA 1255
++ DNRN N N+ S CQIC +GH+A
Sbjct: 228 HRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSA 287
Query: 1254 NRC----HFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNI 1087
RC F+ N+ Q A + +NS N+
Sbjct: 288 KRCPQLHQFQSTTNQQQSTSPFTPW---------------QPRANLAVNSPYNANN---- 328
Query: 1086 VSVWLPHSGDTNHITKDAHLLT--QDYSGSDKVMVGDGTFLPIEKICNIVLDTNTSQFQL 913
WL SG T+HIT D + L+ Q Y+G D VM+ DG+ +PI + L T++ L
Sbjct: 329 ---WLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDL 385
Query: 912 DDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKIKNNLYPMEGI 733
+ VLYVP I +NL+S+ + N+VSVEFF +++K + T L +GK K+ LY
Sbjct: 386 NKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIA 445
Query: 732 TSFALTATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTSSIQ-LDSTDECLS-EACQ 559
+S A++ P SK ++ LWH RLGH + L + S S+ L+ + + LS C
Sbjct: 446 SSQAVSMFASPC---SKATHCLWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCF 502
Query: 558 MGKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSRYH*IYPFKC 379
+ K+HK+P S T+S PL I+ D+W +P S ++YY++F+D ++RY +YP K
Sbjct: 503 INKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQ 561
Query: 378 RTKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYRVSCPHLHQQ 199
+++ F FK+ EN I D E V +++L + GI + S PH +
Sbjct: 562 KSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVV--LRDYLSQHGISHFTSPPHTPEH 619
Query: 198 NGLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVLHFQSPYEVLFNT 19
NGL+ERKH++I EMG TL AS+PK +W +F + Y+INRLPT +L QSP++ LF
Sbjct: 620 NGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQ 679
Query: 18 LPDY 7
P+Y
Sbjct: 680 PPNY 683
Score = 43.5 bits (101), Expect(2) = 3e-77
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = -1
Query: 1973 SNYLIWKNQFESVLITTDLFEMVDGTSVQPYETIDLDGETLPNPLFLHWRKMNRFVMLCL 1794
+NYL+W Q ++ +L +DG++ P TI D NP + WR+ ++ + +
Sbjct: 29 TNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAI 88
Query: 1793 NATLDETISRGIIGFSTARQI 1731
+ ++ + +TA QI
Sbjct: 89 LGAISMSVQPAVSRATTAAQI 109
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 274 bits (701), Expect(2) = 8e-77
Identities = 190/604 (31%), Positives = 289/604 (47%), Gaps = 29/604 (4%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W L + + Y + LR+QL +G K+I Y D A +G+ +D + V
Sbjct: 110 WETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQV 169
Query: 1551 MYALTGLGKEYMQFVISAKNRETVFSLNEVMSRLLHHEQWLKA-EEAETTSVIDXXXXXX 1375
L L +Y + ++T SL E+ RL++ E L A AE +
Sbjct: 170 ERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINQESKLLALNSAEVVPIT--ANVVT 227
Query: 1374 XXXXXXXXXSRSKSDNRNTNTVNDFSQV--------------------ECQICKKKGHTA 1255
++ DNRN N N+ S CQIC +GH+A
Sbjct: 228 HRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSA 287
Query: 1254 NRC----HFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNI 1087
RC F+ N+ Q A + +NS N+
Sbjct: 288 KRCPQLHQFQSTTNQQQSTSPFTPW---------------QPRANLAVNSPYNANN---- 328
Query: 1086 VSVWLPHSGDTNHITKDAHLLT--QDYSGSDKVMVGDGTFLPIEKICNIVLDTNTSQFQL 913
WL SG T+HIT D + L+ Q Y+G D VM+ DG+ +PI + L T++ L
Sbjct: 329 ---WLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDL 385
Query: 912 DDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKIKNNLYPMEGI 733
+ VLYVP I +NL+S+ + N+VSVEFF +++K + T L +GK K+ LY
Sbjct: 386 NKVLYVPNINKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIA 445
Query: 732 TSFALTATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTSSIQ-LDSTDECLS-EACQ 559
+S A++ P SK +++ WH RLGH + L + S S+ L+ + + LS C
Sbjct: 446 SSQAVSMFASPC---SKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCF 502
Query: 558 MGKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSRYH*IYPFKC 379
+ K+HK+P S T+S PL I+ D+W +P S ++YY++F+D ++RY +YP K
Sbjct: 503 INKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQ 561
Query: 378 RTKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYRVSCPHLHQQ 199
+++ F FK+ EN I D E V +++L + GI + S PH +
Sbjct: 562 KSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVV--LRDYLSQHGISHFTSPPHTPEH 619
Query: 198 NGLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVLHFQSPYEVLFNT 19
NGL+ERKH++I EMG TL AS+PK +W +F + Y+INRLPT +L QSP++ LF
Sbjct: 620 NGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQ 679
Query: 18 LPDY 7
P+Y
Sbjct: 680 PPNY 683
Score = 43.5 bits (101), Expect(2) = 8e-77
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = -1
Query: 1973 SNYLIWKNQFESVLITTDLFEMVDGTSVQPYETIDLDGETLPNPLFLHWRKMNRFVMLCL 1794
+NYL+W Q ++ +L +DG++ P TI D NP + WR+ ++ + +
Sbjct: 29 TNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAI 88
Query: 1793 NATLDETISRGIIGFSTARQI 1731
+ ++ + +TA QI
Sbjct: 89 LGAISMSVQPAVSRATTAAQI 109
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 274 bits (701), Expect(2) = 8e-77
Identities = 190/604 (31%), Positives = 289/604 (47%), Gaps = 29/604 (4%)
Frame = -3
Query: 1731 WVHLERQFIQKFYARKSLLRSQLHALKRGNKSISTYFDELKVITDSPAAIGETVDESDVV 1552
W L + + Y + LR+QL +G K+I Y D A +G+ +D + V
Sbjct: 110 WETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQV 169
Query: 1551 MYALTGLGKEYMQFVISAKNRETVFSLNEVMSRLLHHEQWLKA-EEAETTSVIDXXXXXX 1375
L L +Y + ++T SL E+ RL++ E L A AE +
Sbjct: 170 ERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINQESKLLALNSAEVVPIT--ANVVT 227
Query: 1374 XXXXXXXXXSRSKSDNRNTNTVNDFSQV--------------------ECQICKKKGHTA 1255
++ DNRN N N+ S CQIC +GH+A
Sbjct: 228 HRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSA 287
Query: 1254 NRC----HFRYIPNKVXXXXXXXXXXXXXXXXXXXXXTLQQAFAAIHINSAEVTNSDPNI 1087
RC F+ N+ Q A + +NS N+
Sbjct: 288 KRCPQLHQFQSTTNQQQSTSPFTPW---------------QPRANLAVNSPYNANN---- 328
Query: 1086 VSVWLPHSGDTNHITKDAHLLT--QDYSGSDKVMVGDGTFLPIEKICNIVLDTNTSQFQL 913
WL SG T+HIT D + L+ Q Y+G D VM+ DG+ +PI + L T++ L
Sbjct: 329 ---WLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDL 385
Query: 912 DDVLYVPTIKQNLLSITKFTKDNKVSVEFFEWRYEIKCVRTRRVLAEGKIKNNLYPMEGI 733
+ VLYVP I +NL+S+ + N+VSVEFF +++K + T L +GK K+ LY
Sbjct: 386 NKVLYVPNINKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIA 445
Query: 732 TSFALTATTIPTAFTSKTSNALWHRRLGHTTALSLKKIASTSSIQ-LDSTDECLS-EACQ 559
+S A++ P SK +++ WH RLGH + L + S S+ L+ + + LS C
Sbjct: 446 SSQAVSMFASPC---SKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCF 502
Query: 558 MGKNHKLPLFLSKRTTSTPLHLIHCDIWGPAPTTSSLGFKYYILFIDDYSRYH*IYPFKC 379
+ K+HK+P S T+S PL I+ D+W +P S ++YY++F+D ++RY +YP K
Sbjct: 503 INKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQ 561
Query: 378 RTKSLACFQHFKNTTENILSASIKFFQCDGALELVKGQFKEFLDKSGILYRVSCPHLHQQ 199
+++ F FK+ EN I D E V +++L + GI + S PH +
Sbjct: 562 KSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVV--LRDYLSQHGISHFTSPPHTPEH 619
Query: 198 NGLAERKHKYITEMGNTLSFQASLPKYFWNDSFLTSSYIINRLPTKVLHFQSPYEVLFNT 19
NGL+ERKH++I EMG TL AS+PK +W +F + Y+INRLPT +L QSP++ LF
Sbjct: 620 NGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQ 679
Query: 18 LPDY 7
P+Y
Sbjct: 680 PPNY 683
Score = 43.5 bits (101), Expect(2) = 8e-77
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = -1
Query: 1973 SNYLIWKNQFESVLITTDLFEMVDGTSVQPYETIDLDGETLPNPLFLHWRKMNRFVMLCL 1794
+NYL+W Q ++ +L +DG++ P TI D NP + WR+ ++ + +
Sbjct: 29 TNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAI 88
Query: 1793 NATLDETISRGIIGFSTARQI 1731
+ ++ + +TA QI
Sbjct: 89 LGAISMSVQPAVSRATTAAQI 109