BLASTX nr result

ID: Papaver30_contig00051007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00051007
         (426 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013180304.1| PREDICTED: nuclear pore complex protein NUP9...    64   3e-08
gb|EOB11700.1| Nuclear pore complex protein Nup98-Nup96 [Nosema ...    64   6e-08
ref|XP_013171256.1| PREDICTED: nuclear pore complex protein NUP9...    62   1e-07
ref|XP_013170347.1| PREDICTED: nuclear pore complex protein NUP9...    62   1e-07
gb|EOB15424.1| nuclear pore complex protein Nup98-Nup96 [Nosema ...    62   1e-07
ref|XP_013169603.1| PREDICTED: nuclear pore complex protein NUP9...    61   3e-07

>ref|XP_013180304.1| PREDICTED: nuclear pore complex protein NUP98A-like [Papilio
           xuthus]
          Length = 681

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 42/104 (40%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
 Frame = -2

Query: 284 LPAV-GNTASAPVSSFGTTPAFGTT----------SAFAGTSIFGQKPASXXXXXXXXXX 138
           LPA   NT   P SS+GTT +FG+T          +AF  TS FG  P S          
Sbjct: 117 LPAPQSNTFGTPASSWGTTQSFGSTPTPTNTFGTSTAFGTTSAFGNTPTS---------- 166

Query: 137 XXXXXXXXPVFGSQPNTLFGSQPNTGFGSQPTAGFGSQQNTGFG 6
                     FGS P T FGS P+T FGS PT+ FGS   + FG
Sbjct: 167 ---------TFGSTPTTTFGSTPSTTFGSTPTSAFGSTPTSAFG 201



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
 Frame = -2

Query: 254 PVSSFGTTPAFGTTSAFAGT--SIFGQKPASXXXXXXXXXXXXXXXXXXPVFGSQPNTLF 81
           P ++FGT+ AFGTTSAF  T  S FG  P +                    FGS P + F
Sbjct: 144 PTNTFGTSTAFGTTSAFGNTPTSTFGSTPTTTFGSTPST-----------TFGSTPTSAF 192

Query: 80  GSQPNTGFGSQPTAGFGSQQNTGFG 6
           GS P + FG+ PT+ FGS+  T FG
Sbjct: 193 GSTPTSAFGTTPTSTFGSKPTTSFG 217


>gb|EOB11700.1| Nuclear pore complex protein Nup98-Nup96 [Nosema bombycis CQ1]
          Length = 676

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 42/105 (40%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
 Frame = -2

Query: 287 SLPAV-GNTASAPVSSFGTTPAFGTT----------SAFAGTSIFGQKPASXXXXXXXXX 141
           SLPA   NT   P SS+GTT  FG+T          +AF  TS FG  P +         
Sbjct: 104 SLPAPQSNTFGTPASSWGTTQTFGSTPTPTNTFGTSTAFGSTSAFGNTPTTT-------- 155

Query: 140 XXXXXXXXXPVFGSQPNTLFGSQPNTGFGSQPTAGFGSQQNTGFG 6
                      FGS P+T FGS P+T FGS PT+ FGS   + FG
Sbjct: 156 ----------AFGSTPSTSFGSTPSTTFGSTPTSTFGSTPTSTFG 190


>ref|XP_013171256.1| PREDICTED: nuclear pore complex protein NUP98A-like [Papilio
           xuthus]
          Length = 680

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
 Frame = -2

Query: 284 LPAV-GNTASAPVSSFGTTPAFGTT----------SAFAGTSIFGQKPASXXXXXXXXXX 138
           LPA   NT   P SS+GTT +FG+T          +AF  TS FG  P +          
Sbjct: 105 LPAPQSNTFGTPASSWGTTQSFGSTPTPTNTFGTSTAFGSTSAFGNTPTTT--------- 155

Query: 137 XXXXXXXXPVFGSQPNTLFGSQPNTGFGSQPTAGFGSQQNTGFG 6
                     FGS P+T FGS P T FGS PT+ FGS   + FG
Sbjct: 156 ---------AFGSTPSTAFGSTPTTTFGSTPTSTFGSTPTSTFG 190


>ref|XP_013170347.1| PREDICTED: nuclear pore complex protein NUP98A-like [Papilio
           xuthus]
          Length = 674

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 41/104 (39%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
 Frame = -2

Query: 284 LPAV-GNTASAPVSSFGTTPAFGTT----------SAFAGTSIFGQKPASXXXXXXXXXX 138
           LPA   NT   P SS+GTT +FG+T          +AF  TS FG  P +          
Sbjct: 103 LPAPQSNTFGTPASSWGTTQSFGSTPTPTTTFGTSTAFGSTSAFGNTPTTT--------- 153

Query: 137 XXXXXXXXPVFGSQPNTLFGSQPNTGFGSQPTAGFGSQQNTGFG 6
                     FGS P+T FGS P+T FGS PT  FG+  +T FG
Sbjct: 154 ---------AFGSTPSTSFGSTPSTTFGSTPTPPFGTTPSTTFG 188


>gb|EOB15424.1| nuclear pore complex protein Nup98-Nup96 [Nosema bombycis CQ1]
          Length = 670

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 41/104 (39%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
 Frame = -2

Query: 284 LPAV-GNTASAPVSSFGT----------TPAFGTTSAFAGTSIFGQKPASXXXXXXXXXX 138
           LPA   NT   P SS+GT          T  FGT++AF  TS FG  PA+          
Sbjct: 99  LPAPQSNTFGTPASSWGTSQSFGNTPTPTNTFGTSTAFGSTSAFGNTPATTAFGSTPSTS 158

Query: 137 XXXXXXXXPVFGSQPNTLFGSQPNTGFGSQPTAGFGSQQNTGFG 6
                     FG+ P T FG  P T FGS PT+ FGS  +T FG
Sbjct: 159 ----------FGNTPTTSFGCTPTTAFGSTPTSTFGSTPSTAFG 192



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
 Frame = -2

Query: 272 GNTASAPVSSFGTTPAFGTTSAFAGT---SIFGQKPASXXXXXXXXXXXXXXXXXXPVFG 102
           GNT + P ++FGT+ AFG+TSAF  T   + FG  P++                    FG
Sbjct: 121 GNTPT-PTNTFGTSTAFGSTSAFGNTPATTAFGSTPSTSFGNTPTTSFGCTPTT---AFG 176

Query: 101 SQPNTLFGSQPNTGFGSQPTAGFGS 27
           S P + FGS P+T FGS+P+  FGS
Sbjct: 177 STPTSTFGSTPSTAFGSKPSTSFGS 201


>ref|XP_013169603.1| PREDICTED: nuclear pore complex protein NUP98B-like [Papilio
           xuthus]
          Length = 674

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
 Frame = -2

Query: 284 LPAV-GNTASAPVSSFGT----------TPAFGTTSAFAGTSIFGQKPASXXXXXXXXXX 138
           LPA   NT   P SS+GT          T  FGT++AF  TS FG  P++          
Sbjct: 111 LPAPQSNTFGTPASSWGTSQSFGSTPTPTNTFGTSTAFGSTSAFGNTPSTTAFGSTPST- 169

Query: 137 XXXXXXXXPVFGSQPNTLFGSQPNTGFGSQPTAGFGSQQNTGFG 6
                     FGS P + FGS P + FG+ PT+ FGS+  T FG
Sbjct: 170 ---------AFGSTPTSTFGSTPTSAFGTTPTSTFGSKPTTSFG 204


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