BLASTX nr result
ID: Papaver30_contig00050943
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver30_contig00050943 (1071 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 267 1e-68 gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 260 2e-66 dbj|BAA22288.1| polyprotein [Oryza australiensis] 252 4e-64 gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 252 4e-64 gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 250 1e-63 emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group] 244 9e-62 gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 241 6e-61 emb|CBI20118.3| unnamed protein product [Vitis vinifera] 241 7e-61 gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 238 6e-60 gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 238 8e-60 gb|ABF94883.1| transposon protein, putative, unclassified [Oryza... 237 1e-59 gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 236 2e-59 emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group] 236 3e-59 emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group] 236 3e-59 gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 236 3e-59 emb|CAH67504.1| OSIGBa0134H18.6 [Oryza sativa Indica Group] 236 3e-59 gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group] 236 3e-59 gb|AAD12998.1| pol polyprotein [Zea mays] 234 7e-59 emb|CAE03910.2| OSJNBb0015G09.4 [Oryza sativa Japonica Group] 234 9e-59 emb|CDF77009.1| hypothetical transposable element-related protei... 233 2e-58 >gb|ADJ18449.1| gag/pol protein [Bryonia dioica] Length = 1292 Score = 267 bits (682), Expect = 1e-68 Identities = 146/291 (50%), Positives = 186/291 (63%), Gaps = 6/291 (2%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLF-GTAKRASEPLQLVH 179 H RLGHI R+ RL + G L + SLP CE CL GK ++ F G RA PL+LVH Sbjct: 446 HLRLGHINLNRIERLVKSGILNQLEDNSLPPCESCLEGKMTKRSFTGKGLRAKVPLELVH 505 Query: 180 SDICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIK 359 SD+CGPMNVKA G YFI+FIDDF+RYGH+YL+ +KSE+ + F+ EVEN++ ++IK Sbjct: 506 SDLCGPMNVKARGGYEYFISFIDDFSRYGHVYLLHHKSESFEKFKEYKAEVENEIGKTIK 565 Query: 360 ALRTDRGREYLSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVRSMMAQTHL 539 LR+DRG EY+ F+ Y E GI QL+ P TPQQNGV+ERRNRTLLDMVRSMM+ L Sbjct: 566 TLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSYAQL 625 Query: 540 PISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIHNSSHRYGK 704 P SFWG AL TA ++LN V S TPYELW GRK L R G A++ + + K Sbjct: 626 PDSFWGYALETAIHILNNVPSKSVLETPYELWKGRKSSLRYFRIWGCPAHVLVQNPK--K 683 Query: 705 LGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNE 857 L PR+K C+F+ Y S+ +F Q + S +A FLE D R ++ Sbjct: 684 LEPRSKLCLFVGYPKESRGGLFYHPQEN---KVFVSTNATFLEEDHXRNHQ 731 >gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group] gi|62701883|gb|AAX92956.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|108864259|gb|ABA92827.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1184 Score = 260 bits (664), Expect = 2e-66 Identities = 145/306 (47%), Positives = 196/306 (64%), Gaps = 6/306 (1%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLF-GTAKRASEPLQLVH 179 H RLGHI ++RM ++ R+G L S TCE CL GK + F G ++RASE L LVH Sbjct: 417 HCRLGHINEKRMEKIHRDGLLHSFDFESFETCESCLLGKMTKAPFTGQSERASELLALVH 476 Query: 180 SDICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIK 359 +D+CGPM+ A G YF TF DDF+RYG++YL+ +KSE+ + F+ EV+N L ++IK Sbjct: 477 TDVCGPMSSTARGGFGYFFTFTDDFSRYGYVYLMRHKSESFEKFKEFHNEVQNHLGKTIK 536 Query: 360 ALRTDRGREYLSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVRSMMAQTHL 539 LR+DRG EYLS F + +E GI+ QLT PGTPQ NGV+E RNRTLLDMVRSMM+QT+L Sbjct: 537 YLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSEWRNRTLLDMVRSMMSQTNL 596 Query: 540 PISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIHNSSHRYGK 704 +SFWG AL T A+ LN V S TPYE+WTG++P L L+ G Y+ + K Sbjct: 597 LLSFWGYALETTAFTLNSVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEVYVKRL--QSDK 654 Query: 705 LGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEVGEILASLR 884 L P++ KC F+ Y +K + F Q +G V +R FLE +F R ++G +L Sbjct: 655 LTPKSDKCFFVGYPKETKGYYFY-NQEEGKV--FVARHGVFLEKEFISRKDIGSML---- 707 Query: 885 WKSQWK 902 WK +++ Sbjct: 708 WKHRFR 713 >dbj|BAA22288.1| polyprotein [Oryza australiensis] Length = 1317 Score = 252 bits (643), Expect = 4e-64 Identities = 140/293 (47%), Positives = 185/293 (63%), Gaps = 6/293 (2%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLF-GTAKRASEPLQLVH 179 H RLGHI ++RM +L ++G L S TCE CL GK + F G ++RAS+ L LVH Sbjct: 441 HCRLGHINKKRMEKLHKDGLLHSFDFESFETCESCLLGKMTKAPFTGHSERASDLLALVH 500 Query: 180 SDICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIK 359 +D+CGPM+ A G YFITF DDF+RYG+IYL+ +KSE+ + F+ EV+N L ++IK Sbjct: 501 TDVCGPMSSTARGGYQYFITFTDDFSRYGYIYLMRHKSESFEKFKEFQNEVQNHLGKTIK 560 Query: 360 ALRTDRGREYLSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVRSMMAQTHL 539 LR+DRG EY+S F + ++ GI+ QLT PGTPQ NGV+ERRNRTLLDMVRSMM+Q+ L Sbjct: 561 FLRSDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQSDL 620 Query: 540 PISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIHNSSHRYGK 704 P+SFWG AL TAA LN V S TPYE+WTG+ P L L+ G AY+ + K Sbjct: 621 PLSFWGYALETAALTLNRVPSKSVEKTPYEIWTGQPPSLSFLKIWGCEAYVKRL--QSDK 678 Query: 705 LGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEVG 863 L P++ KC + Y +K + F + +R FLE +F R G Sbjct: 679 LTPKSDKCFVVGYPKETKGYYFYNRE---QAKVFVARHGVFLEKEFLSRRVSG 728 >gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1745 Score = 252 bits (643), Expect = 4e-64 Identities = 140/296 (47%), Positives = 192/296 (64%), Gaps = 6/296 (2%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLF-GTAKRASEPLQLVH 179 H RLGHI ++RM +L R+G L + S TCE CL GK + F G ++R SE L LVH Sbjct: 917 HCRLGHINEKRMEKLHRDGLLHSLDFESFETCESCLLGKMTKAPFTGQSERTSELLVLVH 976 Query: 180 SDICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIK 359 +D+CGPM+ A G YFITF DDF+RYG++YL+ +KSE+ + F+ EV+N L ++IK Sbjct: 977 TDVCGPMSSTARCGFGYFITFTDDFSRYGYVYLMRHKSESFEKFKEFQNEVQNHLRKTIK 1036 Query: 360 ALRTDRGREYLSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVRSMMAQTHL 539 LR+D G EYLS F + + GI+ QLT PGTPQ NGV+ERRNRTLL+MVRSMM+QT+L Sbjct: 1037 YLRSDHGGEYLSLEFGNHLKGCGIVPQLTPPGTPQWNGVSERRNRTLLNMVRSMMSQTNL 1096 Query: 540 PISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIHNSSHRYGK 704 +SFWG AL TAA+ LN V S TPYE+WTG++P L L+ G Y+ + K Sbjct: 1097 LLSFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEVYVKRL--QSDK 1154 Query: 705 LGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEVGEIL 872 L P++ KC F+ Y +K + ++ + +G V +R FL+ +F R + G I+ Sbjct: 1155 LTPKSNKCFFVGYPKETKGY-YLYNREEGKV--FVARHGVFLKKEFISRKDSGSIV 1207 >gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score 19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1| putative retrotransposon protein [Arabidopsis thaliana] Length = 964 Score = 250 bits (639), Expect = 1e-63 Identities = 137/293 (46%), Positives = 183/293 (62%), Gaps = 6/293 (2%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLF-GTAKRASEPLQLVH 179 H RLGHI ++ + +L +G L S TCE CL GK + F G ++RAS+ L L+H Sbjct: 85 HCRLGHINEKHIQKLHSDGLLNSFDYESYETCESCLLGKMTKAPFTGHSERASDLLGLIH 144 Query: 180 SDICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIK 359 +D+CGPM+ A YFITF DDF+RYG++YL+ +KS++ + F+ EV+NQ +SIK Sbjct: 145 TDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMKHKSKSFENFKEFQNEVQNQFGKSIK 204 Query: 360 ALRTDRGREYLSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVRSMMAQTHL 539 ALR+DRG EYLS +F + E GI+ QLT PGTPQ NGV+ERRNRTLLDMVRSMM+ T L Sbjct: 205 ALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHTDL 264 Query: 540 PISFWGDALLTAAYVLN-----LVSSTPYELWTGRKPELGNLRP*GSAAYIHNSSHRYGK 704 P FWG AL T+A++LN V TPYE+WTG+ P L L+ G +Y K Sbjct: 265 PSPFWGYALETSAFMLNRCPSKSVEKTPYEIWTGKVPNLSFLKIWGCESYAKRLI--TDK 322 Query: 705 LGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEVG 863 LGP++ KC F+ Y +K + F D V + R+ FLE +F + G Sbjct: 323 LGPKSDKCYFVGYPKETKGYYFY-HPTDNKVFVV--RNGAFLEREFLSKGTSG 372 >emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group] Length = 873 Score = 244 bits (623), Expect = 9e-62 Identities = 138/296 (46%), Positives = 188/296 (63%), Gaps = 6/296 (2%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLF-GTAKRASEPLQLVH 179 H RLGHI ++RM +L R+G L S T E+CL GK + F G ++R+SE L LVH Sbjct: 235 HCRLGHINEKRMEKLHRDGLLHSFDFESFETYEFCLLGKMTKAPFTGQSERSSELLGLVH 294 Query: 180 SDICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIK 359 D+C PM+ A G YFITF DDF+RY ++YL+ +KSE+ + F+ EV+N L ++IK Sbjct: 295 IDVCEPMSSTARGGFGYFITFTDDFSRYVYVYLMRHKSESFEKFKEFQNEVQNHLGKTIK 354 Query: 360 ALRTDRGREYLSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVRSMMAQTHL 539 LR+DRG EYLS F + +E GI+ QLT PGTPQ N V+ERRNRTLLDMV+SMM+QT L Sbjct: 355 YLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNRVSERRNRTLLDMVQSMMSQTDL 414 Query: 540 PISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIHNSSHRYGK 704 P+ FWG AL TAA+ LN V S T YE+WTG++P L L+ G Y+ + K Sbjct: 415 PLCFWGYALETAAFTLNRVPSKSVDKTSYEIWTGKRPSLSFLKIWGCEVYVKRL--QSDK 472 Query: 705 LGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEVGEIL 872 L P++ KC F+ Y +K + F + +G V +R + FLE +F R + G ++ Sbjct: 473 LTPKSDKCFFVGYPKETKGYYFYNRE-EGKV--FVARHSVFLEKEFISRKDSGSMV 525 >gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w] Length = 1303 Score = 241 bits (616), Expect = 6e-61 Identities = 132/296 (44%), Positives = 185/296 (62%), Gaps = 6/296 (2%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLF-GTAKRASEPLQLVH 179 H+RLGHI ++R+ +L ++G L S CE CL GK + F G+ +R L ++H Sbjct: 416 HSRLGHISKKRIAQLQKDGVLESFDLKSDDVCESCLLGKMTKSPFKGSFERGEGLLDIIH 475 Query: 180 SDICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIK 359 +D+CGP GT +++TF DDF+RYG+IYLI +KS+ + F+ EVENQL R IK Sbjct: 476 TDVCGPFRSTTKDGTRFYVTFTDDFSRYGYIYLIKHKSDTFEKFKEFKNEVENQLGRKIK 535 Query: 360 ALRTDRGREYLSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVRSMMAQTHL 539 LR+DRG EYLS F Y +E GI+ QLT P TPQ NGVAERRNRTLLDMVRSMM++ L Sbjct: 536 MLRSDRGGEYLSIEFLDYLKECGIVSQLTPPRTPQLNGVAERRNRTLLDMVRSMMSRASL 595 Query: 540 PISFWGDALLTAAYVLNL-----VSSTPYELWTGRKPELGNLRP*GSAAYIHNSSHRYGK 704 PI FWG AL TAA++LNL V+ TP+E+WTG+ P L +++ G A++ + K Sbjct: 596 PIHFWGYALETAAHILNLVPTKKVAKTPHEMWTGKVPSLAHIKVWGCEAFVRRETQ--DK 653 Query: 705 LGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEVGEIL 872 L R+++C F+ Y S ++F +P V + +R A F E + + + G + Sbjct: 654 LAERSERCFFLGYPKQSFGYLFY--RPSEDVVFV-ARRAVFRERELIFKEDSGSTI 706 >emb|CBI20118.3| unnamed protein product [Vitis vinifera] Length = 1354 Score = 241 bits (615), Expect = 7e-61 Identities = 136/309 (44%), Positives = 186/309 (60%), Gaps = 20/309 (6%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLFGTAKRASEPLQLVHS 182 H RLGHI +ER+ RL +EG L + C C+ GK + A R++E L+++H+ Sbjct: 808 HRRLGHISRERIERLVKEGILQNLDFTDFHVCVNCIKGKQTKHTKKGATRSNELLEIIHT 867 Query: 183 DICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIKA 362 DICGP+++ G YFITFIDD +RYG++YL+ KS+A+D F + EVE QL + IK Sbjct: 868 DICGPLSIPCFTGEKYFITFIDDLSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIKI 927 Query: 363 LRTDRGREYLSDL---------FKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVR 515 +R+D+G EY F + E+ GI Q T+PGTPQQNGVAERRNRTL++MVR Sbjct: 928 VRSDQGGEYYGRYDESGQNPGPFAKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMVR 987 Query: 516 SMMAQTHLPISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIH 680 SMM+ + +PIS WG+AL TA Y+LN V S TP+ELWTGRKP L ++ G A Sbjct: 988 SMMSYSSVPISLWGEALKTAMYILNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPAEAR 1047 Query: 681 NSSHRYGKLGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEH------DF 842 + KL R FI Y D SK + F P+ SV +E+ +A FLE+ + Sbjct: 1048 IYNPHEKKLDSRTVSGYFIGYPDKSKGYRFY--CPNHSVRIVETGNARFLENGEISGSNE 1105 Query: 843 PRRNEVGEI 869 PR+ ++ EI Sbjct: 1106 PRKVDIEEI 1114 >gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1142 Score = 238 bits (607), Expect = 6e-60 Identities = 130/256 (50%), Positives = 170/256 (66%), Gaps = 6/256 (2%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLF-GTAKRASEPLQLVH 179 H RLGHI ++RM +L R+G L S T E CL GK + F G ++RASE L LVH Sbjct: 493 HCRLGHINEKRMEKLHRDGLLHSFDFESFKTYESCLLGKMTKGPFTGQSERASELLGLVH 552 Query: 180 SDICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIK 359 +D+CGPM+ A G YFITF DDF++YG++YL+ +KSE+ + F+ EV+N L ++IK Sbjct: 553 TDVCGPMSSTARGGFGYFITFTDDFSKYGYVYLMRHKSESFEKFKEFQNEVQNHLGKTIK 612 Query: 360 ALRTDRGREYLSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVRSMMAQTHL 539 LR+DRG EYLS F + +E GI+ QLT PGTPQ N V+ERRNRTLLDMVRSMM+QT+L Sbjct: 613 YLRSDRGGEYLSLEFGNHRKECGIVPQLTPPGTPQWNAVSERRNRTLLDMVRSMMSQTNL 672 Query: 540 PISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIHNSSHRYGK 704 P+SF G AL T A+ LN V S TPYE+WTG +P L L+ G Y+ + K Sbjct: 673 PLSFSGYALETTAFTLNWVPSKSVDKTPYEIWTGNRPSLSFLKIWGYEVYVKRL--QSDK 730 Query: 705 LGPRAKKCIFIKYFDH 752 L P++ KC F+ + H Sbjct: 731 LTPKSDKCFFVGLWKH 746 >gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 655 Score = 238 bits (606), Expect = 8e-60 Identities = 138/293 (47%), Positives = 184/293 (62%), Gaps = 8/293 (2%) Frame = +3 Query: 36 MTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLF-GTAKRASEPLQLVHSDICGPMNVKA 212 M +L R+G L S TCE CL GK + F G ++RASE L+LVH+D+CGPM+ A Sbjct: 1 MEKLHRDGLLHSFDFESFETCESCLLGKITKAPFTGQSERASELLRLVHTDVCGPMSSTA 60 Query: 213 IHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIKALRTDRGREYL 392 G YFI F DDF+RYG++YL+ +KSE+ + F+ EV+N L ++IK LR+DRG EY Sbjct: 61 RGGFGYFIIFTDDFSRYGYVYLMRHKSESFEKFKEFHNEVQNHLDKTIKYLRSDRGGEYW 120 Query: 393 SDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVRSMMAQTHLPISFWGDALLT 572 S F + +E GI+ QLT PGTPQ NGV++RRNRTLLDMVRSMM+QT LP+SFWG AL T Sbjct: 121 SLEFGNHLKECGIVPQLTPPGTPQLNGVSKRRNRTLLDMVRSMMSQTDLPLSFWGYALET 180 Query: 573 AAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIHNSSHRYGKLGPRAK--KCI 731 A + +N V S TPYE+WTG++P L L+ G Y+ + KL P++K KC Sbjct: 181 AVFTVNRVPSKSMDKTPYEIWTGKRPSLSFLKIWGCEVYVKRL--QSDKLTPKSKSDKCF 238 Query: 732 FIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEVGEILASLRWK 890 F+ Y +K + F + +G V +R FLE F R + G +L WK Sbjct: 239 FVGYPKETKGYYFYNRE-EGKV--FVARHGVFLEKKFISRKDSGSML----WK 284 >gb|ABF94883.1| transposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1390 Score = 237 bits (604), Expect = 1e-59 Identities = 135/300 (45%), Positives = 180/300 (60%), Gaps = 14/300 (4%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLFGTAKRASEPLQLVHS 182 H RLGHI + R+ RL + L P+ L C C+ GK ++ + AKR++ L+++H+ Sbjct: 455 HYRLGHISRGRIERLVKNEILPPLEFSDLEQCIECIKGKFVKSIKKGAKRSAGILEIIHT 514 Query: 183 DICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIKA 362 DICGP VK++ G FITF DD++RYG+IY I +SEA+D F+ EVENQL IK Sbjct: 515 DICGPFPVKSVDGYDSFITFTDDYSRYGYIYPIKERSEAMDKFKIFKAEVENQLDIKIKV 574 Query: 363 LRTDRGREY---------LSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVR 515 +R+DRG EY + F + E GI+ Q + PG PQQNGVAERRNRTL+DMVR Sbjct: 575 VRSDRGGEYYGRHTPYGQVPGPFARFLLENGIVAQYSTPGEPQQNGVAERRNRTLMDMVR 634 Query: 516 SMMAQTHLPISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIH 680 SMM+ + LP+ W +AL TA ++LN V S TPYELWTGR P L +LR GS A Sbjct: 635 SMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHLRVWGSPAEAK 694 Query: 681 NSSHRYGKLGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEV 860 + GKL P+ C FI Y + SK + F P+ +E+R A FLE + R + V Sbjct: 695 VFNPNIGKLDPKTVSCHFIGYPERSKGYRFY--CPNSYTKFVETRHAVFLEDEMIRGSSV 752 >gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77550379|gb|ABA93176.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 938 Score = 236 bits (602), Expect = 2e-59 Identities = 125/235 (53%), Positives = 161/235 (68%), Gaps = 6/235 (2%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLF-GTAKRASEPLQLVH 179 H RLGHI + RM +L R+G L S TCE CL GK + F G +++ASE L LVH Sbjct: 326 HCRLGHINERRMEKLHRDGLLHSFDFESFETCESCLLGKMTKAPFTGQSEKASELLGLVH 385 Query: 180 SDICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIK 359 +D+CGPM+ A G YFITF +DF+RYG++YL+ +KS++ + F+ EV+N L ++IK Sbjct: 386 TDVCGPMSSTARGGFGYFITFTNDFSRYGYVYLMRHKSDSFEKFKEFQNEVQNHLGKTIK 445 Query: 360 ALRTDRGREYLSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVRSMMAQTHL 539 LR+DRG EYLS F + +E GI+ QLT PGTPQ NGV+ERRNRTLLDMVRSMM+QT L Sbjct: 446 YLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQTDL 505 Query: 540 PISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIHNSS 689 P+SFWG L TAA+ LN V S TPYE+WTG++P L L+ G N+S Sbjct: 506 PLSFWGYTLETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEETPENAS 560 >emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group] Length = 1405 Score = 236 bits (601), Expect = 3e-59 Identities = 135/300 (45%), Positives = 179/300 (59%), Gaps = 14/300 (4%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLFGTAKRASEPLQLVHS 182 H RLGHI + R+ RL + L P+ L C C+ GK ++ + AKR++ L+++H+ Sbjct: 460 HCRLGHISRGRIERLVKNEILPPLEFSDLEQCIECIKGKFVKSIKKGAKRSAGILEIIHT 519 Query: 183 DICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIKA 362 DICGP VK++ G FITF DD++RYG+IY I +SEALD F+ EVENQ IK Sbjct: 520 DICGPFPVKSVDGYDSFITFTDDYSRYGYIYPIKERSEALDKFKIFKAEVENQHDIKIKV 579 Query: 363 LRTDRGREY---------LSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVR 515 +R+DRG EY + F + E GI+ Q + PG PQQNGVAERRNRTL+DMVR Sbjct: 580 VRSDRGGEYYGRHTPYGQVPGPFARFLLENGIVAQYSTPGEPQQNGVAERRNRTLMDMVR 639 Query: 516 SMMAQTHLPISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIH 680 SMM+ + LP+ W +AL TA ++LN V S TPYELWTGR P L +LR GS A Sbjct: 640 SMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHLRVWGSPAEAK 699 Query: 681 NSSHRYGKLGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEV 860 + GKL P+ C FI Y + SK + F P+ +E+R A FLE + R + V Sbjct: 700 VFNPNIGKLDPKTVSCHFIGYPERSKGYRFY--CPNSYTKFVETRHAVFLEDEMIRGSSV 757 >emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group] Length = 1405 Score = 236 bits (601), Expect = 3e-59 Identities = 135/300 (45%), Positives = 179/300 (59%), Gaps = 14/300 (4%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLFGTAKRASEPLQLVHS 182 H RLGHI + R+ RL + L P+ L C C+ GK ++ + AKR++ L+++H+ Sbjct: 460 HCRLGHISRGRIERLVKNEILPPLEFSDLEQCIECIKGKFVKSIKKGAKRSAGILEIIHT 519 Query: 183 DICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIKA 362 DICGP VK++ G FITF DD++RYG+IY I +SEALD F+ EVENQ IK Sbjct: 520 DICGPFPVKSVDGYDSFITFTDDYSRYGYIYPIKERSEALDKFKIFKAEVENQHDIKIKV 579 Query: 363 LRTDRGREY---------LSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVR 515 +R+DRG EY + F + E GI+ Q + PG PQQNGVAERRNRTL+DMVR Sbjct: 580 VRSDRGGEYYGRHTPYGQVPGPFARFLLENGIVAQYSTPGEPQQNGVAERRNRTLMDMVR 639 Query: 516 SMMAQTHLPISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIH 680 SMM+ + LP+ W +AL TA ++LN V S TPYELWTGR P L +LR GS A Sbjct: 640 SMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHLRVWGSPAEAK 699 Query: 681 NSSHRYGKLGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEV 860 + GKL P+ C FI Y + SK + F P+ +E+R A FLE + R + V Sbjct: 700 VFNPNIGKLDPKTVSCHFIGYPERSKGYRFY--CPNSYTKFVETRHAVFLEDEMIRGSSV 757 >gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group] Length = 700 Score = 236 bits (601), Expect = 3e-59 Identities = 135/286 (47%), Positives = 181/286 (63%), Gaps = 8/286 (2%) Frame = +3 Query: 36 MTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLF-GTAKRASEPLQLVHSDICGPMNVKA 212 M +L R+G L S TCE CL GK + F G ++RASE L+LVH+D+CGPM+ A Sbjct: 1 MEKLHRDGLLHSFDFESFETCESCLLGKITKAPFTGQSERASELLRLVHTDVCGPMSSTA 60 Query: 213 IHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIKALRTDRGREYL 392 G YFI F DDF+RYG++YL+ +KSE+ + F+ EV+N L ++IK LR+DRG EY Sbjct: 61 RGGFGYFIIFTDDFSRYGYVYLMRHKSESFEKFKEFHNEVQNHLDKTIKYLRSDRGGEYW 120 Query: 393 SDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVRSMMAQTHLPISFWGDALLT 572 S F + +E GI+ QLT PGTPQ NGV++RRNRTLLDMVRSMM+QT LP+SFWG AL T Sbjct: 121 SLEFGNHLKECGIVPQLTPPGTPQLNGVSKRRNRTLLDMVRSMMSQTDLPLSFWGYALET 180 Query: 573 AAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIHNSSHRYGKLGPRAK--KCI 731 A + +N V S TPYE+WTG++P L L+ G Y+ + KL P++K KC Sbjct: 181 AVFTVNRVPSKSMDKTPYEIWTGKRPSLSFLKIWGCEVYVKRL--QSDKLTPKSKSDKCF 238 Query: 732 FIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEVGEI 869 F+ Y +K + F + +G V +R FLE F R + G + Sbjct: 239 FVGYPKETKGYYFYNRE-EGKV--FVARHGVFLEKKFISRKDSGSM 281 >emb|CAH67504.1| OSIGBa0134H18.6 [Oryza sativa Indica Group] Length = 1261 Score = 236 bits (601), Expect = 3e-59 Identities = 135/300 (45%), Positives = 179/300 (59%), Gaps = 14/300 (4%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLFGTAKRASEPLQLVHS 182 H RLGHI + R+ RL + L P+ L C C+ GK ++ + AKR++ L+++H+ Sbjct: 316 HCRLGHISRGRIERLVKNEILPPLEFSDLEQCIECIKGKFVKSIKKGAKRSAGILEIIHT 375 Query: 183 DICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIKA 362 DICGP VK++ G FITFIDD++RYG+IY I +SEALD F+ EVENQ IK Sbjct: 376 DICGPFPVKSVDGYDSFITFIDDYSRYGYIYPIKERSEALDKFKIFKAEVENQHDIKIKV 435 Query: 363 LRTDRGREY---------LSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVR 515 +R+DRG EY + F + E GI+ Q + PG PQQNGVAERRNRTL+DMVR Sbjct: 436 VRSDRGGEYYGRHTPYGQVPGPFARFLLENGIVAQYSTPGEPQQNGVAERRNRTLMDMVR 495 Query: 516 SMMAQTHLPISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIH 680 SMM+ + LP+ W +AL TA ++LN V S PYELWTGR P L +LR GS A Sbjct: 496 SMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKAPYELWTGRVPSLTHLRVWGSPAEAK 555 Query: 681 NSSHRYGKLGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEV 860 + GKL P+ C FI Y + SK + F P+ +E+R A FLE + R + V Sbjct: 556 VFNPNIGKLDPKTVSCHFIGYPERSKGYRFY--CPNSYTKFVETRHAVFLEDEMIRGSSV 613 >gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1358 Score = 236 bits (601), Expect = 3e-59 Identities = 135/300 (45%), Positives = 179/300 (59%), Gaps = 14/300 (4%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLFGTAKRASEPLQLVHS 182 H RLGHI + R+ RL + L P+ L C C+ GK ++ + AKR++ L+++H+ Sbjct: 413 HCRLGHISRGRIERLVKNEILPPLEFSDLEQCIECIKGKFVKSIKKGAKRSAGILEIIHT 472 Query: 183 DICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIKA 362 DICGP VK++ G FITF DD++RYG+IY I +SEALD F+ EVENQ IK Sbjct: 473 DICGPFPVKSVDGYDSFITFTDDYSRYGYIYPIKERSEALDKFKIFKAEVENQHDIKIKV 532 Query: 363 LRTDRGREY---------LSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVR 515 +R+DRG EY + F + E GI+ Q + PG PQQNGVAERRNRTL+DMVR Sbjct: 533 VRSDRGGEYYGRHTPYGQVPGPFARFLLENGIVAQYSTPGEPQQNGVAERRNRTLMDMVR 592 Query: 516 SMMAQTHLPISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIH 680 SMM+ + LP+ W +AL TA ++LN V S TPYELWTGR P L +LR GS A Sbjct: 593 SMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHLRVWGSPAEAK 652 Query: 681 NSSHRYGKLGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEV 860 + GKL P+ C FI Y + SK + F P+ +E+R A FLE + R + V Sbjct: 653 VFNPNIGKLDPKTVSCHFIGYPERSKGYRFY--CPNSYTKFVETRHAVFLEDEMIRGSSV 710 >gb|AAD12998.1| pol polyprotein [Zea mays] Length = 998 Score = 234 bits (598), Expect = 7e-59 Identities = 133/300 (44%), Positives = 177/300 (59%), Gaps = 14/300 (4%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLFGTAKRASEPLQLVHS 182 H RLGHI + R+ L +E L P+ L C C+ GK +++ AK ++ L+++H+ Sbjct: 41 HYRLGHISRGRIESLVKEQILHPLDFTDLEQCRDCIKGKFAKQIKKDAKHSTRVLEIIHT 100 Query: 183 DICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIKA 362 DICGP V+ + G + FITF DD++RYG+IY I +SEALD F++ EVENQ IK Sbjct: 101 DICGPFPVRTVDGFNSFITFTDDYSRYGYIYPIKERSEALDKFKQFKAEVENQHDLKIKI 160 Query: 363 LRTDRGREY---------LSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVR 515 +R+DRG EY + F + E GI+ Q + PG PQQNGVAERRNRTL+DMVR Sbjct: 161 VRSDRGGEYYGRHTEYGQVPGPFARFLRENGIVAQYSTPGEPQQNGVAERRNRTLMDMVR 220 Query: 516 SMMAQTHLPISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIH 680 SM++ ++LP+ W +AL TA ++LN V S TPYELWTGRKP L G A Sbjct: 221 SMLSYSNLPLGLWMEALKTAMHILNRVPSKSVARTPYELWTGRKPTLNYFHIWGCPAEAR 280 Query: 681 NSSHRYGKLGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEV 860 + GKL R C FI Y D SK + F PD IE+R A FLE D + ++V Sbjct: 281 IFNPGQGKLDERTTSCHFIGYPDRSKGYRFY--CPDRQTKFIETRHAIFLEDDMIKGSKV 338 >emb|CAE03910.2| OSJNBb0015G09.4 [Oryza sativa Japonica Group] Length = 1393 Score = 234 bits (597), Expect = 9e-59 Identities = 134/300 (44%), Positives = 178/300 (59%), Gaps = 14/300 (4%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLFGTAKRASEPLQLVHS 182 H RLGHI + R+ RL + L P+ L C C+ GK ++ + AKR++ L+++H+ Sbjct: 460 HCRLGHISRGRIERLVKNEILPPLEFSDLEQCIECIKGKFVKSIKKGAKRSAGILEIIHT 519 Query: 183 DICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIKA 362 DICGP VK++ G FITF DD++RYG+IY I +SEALD F+ EVENQ IK Sbjct: 520 DICGPFPVKSVDGYDSFITFTDDYSRYGYIYPIKERSEALDKFKIFKAEVENQHDIKIKV 579 Query: 363 LRTDRGREY---------LSDLFKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMVR 515 +R+DRG EY + F + E GI+ Q + PG PQQNGVAERRNRTL+DMVR Sbjct: 580 VRSDRGGEYYGRHTPYGQVPGPFARFLLENGIVAQYSTPGEPQQNGVAERRNRTLMDMVR 639 Query: 516 SMMAQTHLPISFWGDALLTAAYVLNLVSS-----TPYELWTGRKPELGNLRP*GSAAYIH 680 SMM+ + LP+ W +AL TA ++LN V S TPYELWTGR P L +LR GS Sbjct: 640 SMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHLRVWGSPTEAK 699 Query: 681 NSSHRYGKLGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEIESRDADFLEHDFPRRNEV 860 + GKL P+ C FI Y + SK + F P+ +E+R A FLE + R + V Sbjct: 700 VFNPNIGKLDPKTVSCHFIGYPERSKGYRFY--CPNSYTKFVETRHAVFLEDEMIRGSSV 757 >emb|CDF77009.1| hypothetical transposable element-related protein, partial [Boechera divaricarpa] Length = 1350 Score = 233 bits (594), Expect = 2e-58 Identities = 137/307 (44%), Positives = 179/307 (58%), Gaps = 17/307 (5%) Frame = +3 Query: 3 HARLGHIGQERMTRLAREGFLGPVAKVSLPTCEYCLAGKAIRKLFGTAKRASEPLQLVHS 182 H RLGHI ++R+ RL EG L + + C C+ GK + A RA+E L+L+H+ Sbjct: 435 HKRLGHISRDRIERLVSEGILSSIDFTNCEICVDCIKGKQTKHKKSGAYRATEVLELIHT 494 Query: 183 DICGPMNVKAIHGTSYFITFIDDFTRYGHIYLISYKSEALDCFRRCVREVENQLSRSIKA 362 DICGP + +G YFI+FIDD++RY +I+LI KSE+LD FR+ EVENQL R IK Sbjct: 495 DICGPFPTASWNGQQYFISFIDDYSRYAYIFLIHEKSESLDVFRKFKAEVENQLERKIKF 554 Query: 363 LRTDRGREYLSDL----------FKGYCEEKGILRQLTIPGTPQQNGVAERRNRTLLDMV 512 +R+DRG EY F Y EE GI+ Q T+PG+P NGV+ERRNRTL DMV Sbjct: 555 VRSDRGGEYYGRYDGSGEQRPGPFAKYLEECGIVPQYTMPGSPSMNGVSERRNRTLKDMV 614 Query: 513 RSMMAQTHLPISFWGDALLTAAYVLNLV-----SSTPYELWTGRKPELGNLRP*GSAAYI 677 RSM+ + LP S WG+AL TAAY+LN V + TPYELWTGRKP L + G A Sbjct: 615 RSMICHSTLPDSLWGEALKTAAYILNRVPTEATAKTPYELWTGRKPSLKHFHIWGCPAEA 674 Query: 678 HNSSHRYGKLGPRAKKCIFIKYFDHSKSHVFIGEQPDGSVTEI-ESRDADFLE-HDFPRR 851 KL R FI Y + S+ + F D ++ I E+ A F E ++F R Sbjct: 675 RPYRPHEKKLDSRTVSSYFIGYSERSRGYKFY----DPTLRNIFETGTATFFEDNEFRGR 730 Query: 852 NEVGEIL 872 N+V I+ Sbjct: 731 NKVRNII 737