BLASTX nr result
ID: Papaver30_contig00050761
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00050761
(403 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD89878.1| RNA polymerase II, second largest subunit [Doron... 52 9e-09
emb|CAD89597.1| RNA polymerase II, second largest subunit [Senec... 52 9e-09
emb|CAB43065.2| RNA polymerase II [Fagraea sp. Bremer 900109] 50 2e-08
emb|CAB43058.2| RNA polymerase II [Anthocleista grandiflora] 50 2e-08
emb|CAB43081.2| RNA polymerase II [Potalia resinifera] 50 2e-08
gb|AJS14112.1| RNA polymerase II second largest subunit, partial... 50 2e-08
gb|AAC64013.1| RNA polymerase II subunit 2 [Chironia linoides] 50 3e-08
gb|AFV74904.1| RNA polymerase II second largest subunit, partial... 50 3e-08
gb|AJS14110.1| RNA polymerase II second largest subunit, partial... 50 3e-08
emb|CAB43084.1| RNA polymerase II [Spigelia anthelmia] 50 3e-08
gb|AAT69132.1| RNA polymerase II, partial [Cuscuta europaea] 49 3e-08
dbj|BAG72391.1| RNA polymerase II second largest subunit [Machil... 50 3e-08
gb|AAW22921.1| RNA polymerase II second largest subunit, partial... 49 4e-08
emb|CAD92460.1| RNA polymerase II [Escallonia sp. Oxelman 2340] 49 4e-08
gb|AAW22920.1| RNA polymerase II second largest subunit, partial... 49 4e-08
emb|CAD89691.1| RNA polymerase II, second largest subunit [Escal... 49 4e-08
emb|CAB43074.1| RNA polymerase II [Mitreola petiolata] 49 4e-08
emb|CAB43085.1| RNA polymerase II, partial [Stephanotis floribunda] 49 4e-08
emb|CAB43089.1| RNA polymerase II [Wrightia arborea] 49 4e-08
gb|ABC96796.1| RNA polymerase II [Gentiana lutea] 49 4e-08
>emb|CAD89878.1| RNA polymerase II, second largest subunit [Doronicum orientale]
Length = 326
Score = 51.6 bits (122), Expect(2) = 9e-09
Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = -2
Query: 402 DDAHQG*AFGQN*HDNSNIMRHNERGAGNPCIKSIKY*IYACR*ANIRVLFVGQCSLGLR 223
DDA QG A D+S +RH+E G + + + R +RV
Sbjct: 151 DDAAQGQASRYTRRDHSTSLRHSETGMVDQVLLTTN--ADGLRFVKVRV----------- 197
Query: 222 VGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
RSVRI +GDKF RHGQK TV MT ++ + E IT DIIVNPH
Sbjct: 198 ---RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPH 244
Score = 34.7 bits (78), Expect(2) = 9e-09
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 246 IPSRMTIGQLIECIMGKVAAHMGKEG 271
>emb|CAD89597.1| RNA polymerase II, second largest subunit [Senecio vulgaris]
Length = 325
Score = 51.6 bits (122), Expect(2) = 9e-09
Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = -2
Query: 402 DDAHQG*AFGQN*HDNSNIMRHNERGAGNPCIKSIKY*IYACR*ANIRVLFVGQCSLGLR 223
DDA QG A D+S +RH+E G + + + R +RV
Sbjct: 149 DDAAQGQASRYTRRDHSTSLRHSETGMVDQVLLTTN--ADGLRFVKVRV----------- 195
Query: 222 VGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
RSVRI +GDKF RHGQK TV MT ++ + E IT DIIVNPH
Sbjct: 196 ---RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPH 242
Score = 34.7 bits (78), Expect(2) = 9e-09
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 244 IPSRMTIGQLIECIMGKVAAHMGKEG 269
>emb|CAB43065.2| RNA polymerase II [Fagraea sp. Bremer 900109]
Length = 258
Score = 50.4 bits (119), Expect(2) = 2e-08
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = -2
Query: 228 LRVGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
++V RSVRI +GDKF RHGQK TV MT ++ F SE IT DIIVNPH
Sbjct: 48 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTSEGITPDIIVNPH 99
Score = 34.7 bits (78), Expect(2) = 2e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 101 IPSRMTIGQLIECIMGKVAAHMGKEG 126
>emb|CAB43058.2| RNA polymerase II [Anthocleista grandiflora]
Length = 257
Score = 50.4 bits (119), Expect(2) = 2e-08
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = -2
Query: 228 LRVGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
++V RSVRI +GDKF RHGQK TV MT ++ F SE IT DIIVNPH
Sbjct: 46 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTSEGITPDIIVNPH 97
Score = 34.7 bits (78), Expect(2) = 2e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 99 IPSRMTIGQLIECIMGKVAAHMGKEG 124
>emb|CAB43081.2| RNA polymerase II [Potalia resinifera]
Length = 250
Score = 50.4 bits (119), Expect(2) = 2e-08
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = -2
Query: 228 LRVGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
++V RSVRI +GDKF RHGQK TV MT ++ F SE IT DIIVNPH
Sbjct: 50 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTSEGITPDIIVNPH 101
Score = 34.7 bits (78), Expect(2) = 2e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 103 IPSRMTIGQLIECIMGKVAAHMGKEG 128
>gb|AJS14112.1| RNA polymerase II second largest subunit, partial [Lophophytum
leandrii]
Length = 570
Score = 50.1 bits (118), Expect(2) = 2e-08
Identities = 42/110 (38%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = -2
Query: 402 DDAHQG*AFGQN*HDNSNIMRHNERGAGNPCIKSIKY*IYACR*ANIRVLFVGQCSLGLR 223
+DA QG A D+S+ +RH+E G + + + R +RV
Sbjct: 362 EDAGQGQAARYTRRDHSSSLRHSETGIIDQVLLTTN--ADGLRFVKVRV----------- 408
Query: 222 VGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
RSVRI +GDKF RHGQK TV MT ++ + E IT DIIVNPH
Sbjct: 409 ---RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPH 455
Score = 34.7 bits (78), Expect(2) = 2e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 457 IPSRMTIGQLIECLMGKVAAHMGKEG 482
>gb|AAC64013.1| RNA polymerase II subunit 2 [Chironia linoides]
Length = 256
Score = 50.1 bits (118), Expect(2) = 3e-08
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = -2
Query: 228 LRVGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
++V RSVR+ +GDKF RHGQK TV MT ++ F SE IT DIIVNPH
Sbjct: 24 VKVRVRSVRVPQIGDKFSSRHGQKGTVGMTYTQEDMPFTSEGITPDIIVNPH 75
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 77 IPSRMTIGQLIECIMGKVAAHMGKEG 102
>gb|AFV74904.1| RNA polymerase II second largest subunit, partial [Viscum
alniformosanae]
Length = 569
Score = 49.7 bits (117), Expect(2) = 3e-08
Identities = 41/109 (37%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = -2
Query: 399 DAHQG*AFGQN*HDNSNIMRHNERGAGNPCIKSIKY*IYACR*ANIRVLFVGQCSLGLRV 220
D QG +F D+S +RH+E G + + + R +RV
Sbjct: 362 DESQGQSFRYTKRDHSTSLRHSETGIVDQVLLTTN--ADGLRFVKVRV------------ 407
Query: 219 GRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
RSVRI +GDKF RHGQK TV MT ++ + E IT DIIVNPH
Sbjct: 408 --RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPH 454
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 456 IPSRMTIGQLIECIMGKVAAHMGKEG 481
>gb|AJS14110.1| RNA polymerase II second largest subunit, partial [Korthalsella
japonica]
Length = 505
Score = 49.7 bits (117), Expect(2) = 3e-08
Identities = 41/109 (37%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = -2
Query: 399 DAHQG*AFGQN*HDNSNIMRHNERGAGNPCIKSIKY*IYACR*ANIRVLFVGQCSLGLRV 220
D QG + HD+S +RH+E G + + + R +RV
Sbjct: 298 DESQGQSSRYTKHDHSTSLRHSETGIVDQVLLTTN--ADGLRFVKVRV------------ 343
Query: 219 GRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
RSVRI +GDKF RHGQK TV MT ++ + E IT DIIVNPH
Sbjct: 344 --RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPH 390
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 392 IPSRMTIGQLIECIMGKVAAHMGKEG 417
>emb|CAB43084.1| RNA polymerase II [Spigelia anthelmia]
Length = 260
Score = 49.7 bits (117), Expect(2) = 3e-08
Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = -2
Query: 360 DNSNIMRHNERGAGNPCIKSIKY*IYACR*ANIRVLFVGQCSLGLRVGRRSVRIYHVGDK 181
D+S +RHNE G + + + R +RV RSVRI +GDK
Sbjct: 20 DHSTSLRHNENGIVDQVLLTTN--ADGLRFVKVRV--------------RSVRIPQIGDK 63
Query: 180 F--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
F RHGQK TV MT ++ F E +T DIIVNPH
Sbjct: 64 FSSRHGQKGTVGMTYTQEDMPFTXEGVTPDIIVNPH 99
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 101 IPSRMTIGQLIECIMGKVAAHMGKEG 126
>gb|AAT69132.1| RNA polymerase II, partial [Cuscuta europaea]
Length = 191
Score = 48.5 bits (114), Expect(2) = 3e-08
Identities = 43/110 (39%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = -2
Query: 402 DDAHQG*AFGQN*HDNSNIMRHNERGAGNPCIKSIKY*IYACR*ANIRVLFVGQCSLGLR 223
DDA QG A D+S I+ H+E G + + + R +RV
Sbjct: 61 DDA-QGQAARYTKRDHSTILPHSETGMVDQVLLTTN--ADGLRFVKVRV----------- 106
Query: 222 VGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
RSVRI +GDKF RHGQK TV MT ++ + +E IT DIIVNPH
Sbjct: 107 ---RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTAEGITPDIIVNPH 153
Score = 35.8 bits (81), Expect(2) = 3e-08
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI QVIE GK A H+GKEG
Sbjct: 155 IPSRMTIGQVIECIMGKVAAHMGKEG 180
>dbj|BAG72391.1| RNA polymerase II second largest subunit [Machilus rimosa]
Length = 167
Score = 49.7 bits (117), Expect(2) = 3e-08
Identities = 44/113 (38%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Frame = -2
Query: 402 DDAHQG*AFGQN*HDNSNIMRHNERGAGNPCIKSIKY*IYACR*ANIRVLFVGQCSLGLR 223
D+ QG D+S +RH+E G N +VL GLR
Sbjct: 38 DETQQGQTSRYTRRDHSTSLRHSESGMVN------------------QVLLTTNAD-GLR 78
Query: 222 ---VGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
V RSVRI +GDKF RHGQK TV MT ++ + E IT DIIVNPH
Sbjct: 79 FVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPH 131
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 133 IPSRMTIGQLIECIMGKVAAHMGKEG 158
>gb|AAW22921.1| RNA polymerase II second largest subunit, partial [Pseudotsuga
menziesii]
Length = 554
Score = 49.3 bits (116), Expect(2) = 4e-08
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = -2
Query: 228 LRVGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
++V RSVRI +GDKF RHGQK TV MT ++ + SE IT DIIVNPH
Sbjct: 396 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTSEGITPDIIVNPH 447
Score = 34.7 bits (78), Expect(2) = 4e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 449 IPSRMTIGQLIECIMGKVAAHMGKEG 474
>emb|CAD92460.1| RNA polymerase II [Escallonia sp. Oxelman 2340]
Length = 543
Score = 49.3 bits (116), Expect(2) = 4e-08
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = -2
Query: 402 DDAHQG*AFGQN*HDNSNIMRHNERGAGNPCIKSIKY*IYACR*ANIRVLFVGQCSLGLR 223
DDA QG A + D+S +RH+E G + + + R +RV
Sbjct: 362 DDA-QGQASRYSKRDHSTSLRHSETGMVDQVLLTTN--ADGLRFVKVRV----------- 407
Query: 222 VGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
RSVRI +GDKF RHGQK TV MT ++ + +E IT DIIVNPH
Sbjct: 408 ---RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTAEGITPDIIVNPH 454
Score = 34.7 bits (78), Expect(2) = 4e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 456 IPSRMTIGQLIECIMGKVAAHMGKEG 481
>gb|AAW22920.1| RNA polymerase II second largest subunit, partial [Larix
occidentalis]
Length = 534
Score = 49.3 bits (116), Expect(2) = 4e-08
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = -2
Query: 228 LRVGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
++V RSVRI +GDKF RHGQK TV MT ++ + SE IT DIIVNPH
Sbjct: 394 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTSEGITPDIIVNPH 445
Score = 34.7 bits (78), Expect(2) = 4e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 447 IPSRMTIGQLIECIMGKVAAHMGKEG 472
>emb|CAD89691.1| RNA polymerase II, second largest subunit [Escallonia sp. Oxelman
2340]
Length = 508
Score = 49.3 bits (116), Expect(2) = 4e-08
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = -2
Query: 402 DDAHQG*AFGQN*HDNSNIMRHNERGAGNPCIKSIKY*IYACR*ANIRVLFVGQCSLGLR 223
DDA QG A + D+S +RH+E G + + + R +RV
Sbjct: 305 DDA-QGQASRYSKRDHSTSLRHSETGMVDQVLLTTN--ADGLRFVKVRV----------- 350
Query: 222 VGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
RSVRI +GDKF RHGQK TV MT ++ + +E IT DIIVNPH
Sbjct: 351 ---RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTAEGITPDIIVNPH 397
Score = 34.7 bits (78), Expect(2) = 4e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 399 IPSRMTIGQLIECIMGKVAAHMGKEG 424
>emb|CAB43074.1| RNA polymerase II [Mitreola petiolata]
Length = 261
Score = 49.3 bits (116), Expect(2) = 4e-08
Identities = 43/112 (38%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Frame = -2
Query: 402 DDAH--QG*AFGQN*HDNSNIMRHNERGAGNPCIKSIKY*IYACR*ANIRVLFVGQCSLG 229
DDAH A D+S +RH+E G + + + R +RV
Sbjct: 5 DDAHVPSSLASRYTKRDHSTSLRHSENGIVDQVLLTTN--ADGLRFVKVRV--------- 53
Query: 228 LRVGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
RSVRI +GDKF RHGQK TV MT ++ F E IT DIIVNPH
Sbjct: 54 -----RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPH 100
Score = 34.7 bits (78), Expect(2) = 4e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 102 IPSRMTIGQLIECIMGKVAAHMGKEG 127
>emb|CAB43085.1| RNA polymerase II, partial [Stephanotis floribunda]
Length = 261
Score = 49.3 bits (116), Expect(2) = 4e-08
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = -2
Query: 228 LRVGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
++V RSVRI +GDKF RHGQK TV MT ++ F +E IT DIIVNPH
Sbjct: 50 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTAEGITPDIIVNPH 101
Score = 34.7 bits (78), Expect(2) = 4e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 103 IPSRMTIGQLIECIMGKVAAHMGKEG 128
>emb|CAB43089.1| RNA polymerase II [Wrightia arborea]
Length = 249
Score = 49.3 bits (116), Expect(2) = 4e-08
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = -2
Query: 228 LRVGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
++V RSVRI +GDKF RHGQK TV MT ++ F +E IT DIIVNPH
Sbjct: 37 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTAEGITPDIIVNPH 88
Score = 34.7 bits (78), Expect(2) = 4e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 90 IPSRMTIGQLIECIMGKVAAHMGKEG 115
>gb|ABC96796.1| RNA polymerase II [Gentiana lutea]
Length = 206
Score = 49.3 bits (116), Expect(2) = 4e-08
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = -2
Query: 228 LRVGRRSVRIYHVGDKF--RHGQKRTVVMT*HEKR--FHSESITQDIIVNPH 85
++V RSVRI +GDKF RHGQK TV MT ++ F +E IT DIIVNPH
Sbjct: 21 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTAEGITPDIIVNPH 72
Score = 34.7 bits (78), Expect(2) = 4e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 82 IPFRLTIVQVIESTTGKAADHVGKEG 5
IP R+TI Q+IE GK A H+GKEG
Sbjct: 74 IPSRMTIGQLIECIMGKVAAHMGKEG 99