BLASTX nr result
ID: Papaver30_contig00046972
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00046972
(551 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [... 147 4e-33
ref|XP_008462812.1| PREDICTED: RNA polymerase sigma factor sigA ... 145 9e-33
gb|AKC88628.1| sigma factor [Francoa sonchifolia] 145 1e-32
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA ... 145 2e-32
gb|AKC88633.1| sigma factor [Melianthus villosus] 144 3e-32
ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA ... 144 3e-32
ref|XP_010662045.1| PREDICTED: RNA polymerase sigma factor sigA ... 143 5e-32
ref|XP_010662046.1| PREDICTED: RNA polymerase sigma factor sigA ... 143 5e-32
ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-... 143 5e-32
emb|CBI26421.3| unnamed protein product [Vitis vinifera] 143 5e-32
ref|XP_011075762.1| PREDICTED: RNA polymerase sigma factor sigA ... 143 6e-32
ref|XP_009629626.1| PREDICTED: RNA polymerase sigma factor sigA-... 143 6e-32
ref|XP_009629625.1| PREDICTED: RNA polymerase sigma factor sigA-... 143 6e-32
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu... 143 6e-32
dbj|BAA88922.1| sigma factor [Nicotiana tabacum] 143 6e-32
gb|AAB81958.1| RNA polymerase sigma subunit 1 [Arabidopsis thali... 142 8e-32
ref|NP_176666.1| RNA polymerase sigma subunit 1 [Arabidopsis tha... 142 8e-32
dbj|BAA22214.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 142 8e-32
emb|CAA74896.1| sigma factorB [Arabidopsis thaliana] 142 8e-32
gb|AAG40388.1|AF325036_1 At1g64860 [Arabidopsis thaliana] 142 8e-32
>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 508
Score = 147 bits (370), Expect = 4e-33
Identities = 81/127 (63%), Positives = 85/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEAVSK+FSLDREAFPS+NGLPGET HSYIAD CLENNPWH
Sbjct: 382 KVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGVDDWALKDEVNKL 441
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
LTWEDIS+RI LSRERVRQVGLVALEKLK AARK+KL
Sbjct: 442 INLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKL 501
Query: 239 EAMLVKH 219
EAMLVKH
Sbjct: 502 EAMLVKH 508
>ref|XP_008462812.1| PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo]
Length = 509
Score = 145 bits (367), Expect = 9e-33
Identities = 77/127 (60%), Positives = 85/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEA+SK+FSLDREAFPS+NGLPGET HSYIAD CLENNPWH
Sbjct: 383 KVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKL 442
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWE+IS+RI LSRERVRQVGLVALEKLK AA+ RK+
Sbjct: 443 INMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKM 502
Query: 239 EAMLVKH 219
EAML+KH
Sbjct: 503 EAMLIKH 509
>gb|AKC88628.1| sigma factor [Francoa sonchifolia]
Length = 508
Score = 145 bits (366), Expect = 1e-32
Identities = 77/127 (60%), Positives = 85/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEA+SK+FSLDR+AFPS+NGLPGET HSYIAD CL+NNPWH
Sbjct: 382 KVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIADNCLDNNPWHGVDEWALKDEVNKL 441
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDIS+RI LSRERVRQVGLVALEKLK AARK+ +
Sbjct: 442 IKMTLGEREREIIRLYYGLDGECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKNM 501
Query: 239 EAMLVKH 219
EAMLVKH
Sbjct: 502 EAMLVKH 508
>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA [Cucumis sativus]
gi|700208220|gb|KGN63339.1| hypothetical protein
Csa_2G431090 [Cucumis sativus]
Length = 508
Score = 145 bits (365), Expect = 2e-32
Identities = 77/127 (60%), Positives = 85/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEA+SK+FSLDREAFPS+NGLPGET HSYIAD CLENNPWH
Sbjct: 382 KVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQL 441
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWE+IS+RI LSRERVRQVGLVALEKLK AA+ RK+
Sbjct: 442 INMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKM 501
Query: 239 EAMLVKH 219
EAML+KH
Sbjct: 502 EAMLLKH 508
>gb|AKC88633.1| sigma factor [Melianthus villosus]
Length = 506
Score = 144 bits (362), Expect = 3e-32
Identities = 75/127 (59%), Positives = 85/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
K+ NATEA+SK+FSLDREAFPS+NGLPGET HSYIAD CL+NNPWH
Sbjct: 380 KIRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLDNNPWHGVDEWALKDEVKKL 439
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDIS+RI LSRERVRQVGLVA+EKLK AAR++ +
Sbjct: 440 IEMTLGEREREIIRLYHGLDNECLTWEDISKRIGLSRERVRQVGLVAMEKLKHAARRKHM 499
Query: 239 EAMLVKH 219
EAMLVKH
Sbjct: 500 EAMLVKH 506
>ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA [Jatropha curcas]
gi|802585167|ref|XP_012070279.1| PREDICTED: RNA
polymerase sigma factor sigA [Jatropha curcas]
gi|643732469|gb|KDP39565.1| hypothetical protein
JCGZ_02585 [Jatropha curcas]
Length = 508
Score = 144 bits (362), Expect = 3e-32
Identities = 79/127 (62%), Positives = 84/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEA+SK+FSLDREAFPS+NGLPGET HSYIAD C ENNPWH
Sbjct: 382 KVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCPENNPWHGVDEWALKDEVNKL 441
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
LTWEDIS+RI LSRERVRQVGLVALEKLK AARK+KL
Sbjct: 442 IDLTLQQREREIIRLYYGLDNETLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKL 501
Query: 239 EAMLVKH 219
EAMLVKH
Sbjct: 502 EAMLVKH 508
>ref|XP_010662045.1| PREDICTED: RNA polymerase sigma factor sigA isoform X1 [Vitis
vinifera]
Length = 513
Score = 143 bits (361), Expect = 5e-32
Identities = 78/127 (61%), Positives = 85/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEA+SK+FSLDREAFPS+NGLPGETLHSYIAD LENNPWH
Sbjct: 387 KVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRLENNPWHGVDEWALKDEVNKL 446
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDIS+RI LSRERVRQVGLVALEKLK AARK ++
Sbjct: 447 INTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKNAARKGRM 506
Query: 239 EAMLVKH 219
EAMLVK+
Sbjct: 507 EAMLVKY 513
>ref|XP_010662046.1| PREDICTED: RNA polymerase sigma factor sigA isoform X2 [Vitis
vinifera]
Length = 507
Score = 143 bits (361), Expect = 5e-32
Identities = 78/127 (61%), Positives = 85/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEA+SK+FSLDREAFPS+NGLPGETLHSYIAD LENNPWH
Sbjct: 381 KVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRLENNPWHGVDEWALKDEVNKL 440
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDIS+RI LSRERVRQVGLVALEKLK AARK ++
Sbjct: 441 INTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKNAARKGRM 500
Query: 239 EAMLVKH 219
EAMLVK+
Sbjct: 501 EAMLVKY 507
>ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
gi|720061510|ref|XP_010275190.1| PREDICTED: RNA
polymerase sigma factor sigA-like [Nelumbo nucifera]
gi|720061513|ref|XP_010275191.1| PREDICTED: RNA
polymerase sigma factor sigA-like [Nelumbo nucifera]
Length = 516
Score = 143 bits (361), Expect = 5e-32
Identities = 78/127 (61%), Positives = 85/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEAV+K+ SLDREAFPS+NGLPGETLHSYIAD +ENNPWH
Sbjct: 390 KVRNATEAVNKVISLDREAFPSLNGLPGETLHSYIADNRIENNPWHGVDEWSLKDEVNNL 449
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDISRRI LSRERVRQVGLVALEKLK AARK++L
Sbjct: 450 LNTTLRERERDIIRLYYGLDEECLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKKRL 509
Query: 239 EAMLVKH 219
+AMLVKH
Sbjct: 510 DAMLVKH 516
>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 143 bits (361), Expect = 5e-32
Identities = 78/127 (61%), Positives = 85/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEA+SK+FSLDREAFPS+NGLPGETLHSYIAD LENNPWH
Sbjct: 429 KVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRLENNPWHGVDEWALKDEVNKL 488
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDIS+RI LSRERVRQVGLVALEKLK AARK ++
Sbjct: 489 INTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKNAARKGRM 548
Query: 239 EAMLVKH 219
EAMLVK+
Sbjct: 549 EAMLVKY 555
>ref|XP_011075762.1| PREDICTED: RNA polymerase sigma factor sigA [Sesamum indicum]
Length = 505
Score = 143 bits (360), Expect = 6e-32
Identities = 77/127 (60%), Positives = 85/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEA++K+FSLDREAFPS+NGLPGETLHSYIAD +ENNPWH
Sbjct: 379 KVKNATEAITKVFSLDREAFPSLNGLPGETLHSYIADNHVENNPWHGVDEWALKDEVDKL 438
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDISRRI LSRERVRQVGLVALEKLK AARKR+L
Sbjct: 439 INLTLREREREIIRLYYGLDNECLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRL 498
Query: 239 EAMLVKH 219
+ MLV+H
Sbjct: 499 DTMLVQH 505
>ref|XP_009629626.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
[Nicotiana tomentosiformis]
Length = 502
Score = 143 bits (360), Expect = 6e-32
Identities = 80/127 (62%), Positives = 84/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEA SK+FSLDREAFPS+NGLPGETLHSYIAD LEN PWH
Sbjct: 376 KVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRLENIPWHGVDEWMLKDEVNNL 435
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDISRRI LSRERVRQVGLVALEKLK AARKR+L
Sbjct: 436 ISSTLREREREIVRLYYGLDNECLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRL 495
Query: 239 EAMLVKH 219
+AMLVKH
Sbjct: 496 DAMLVKH 502
>ref|XP_009629625.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
[Nicotiana tomentosiformis]
Length = 513
Score = 143 bits (360), Expect = 6e-32
Identities = 80/127 (62%), Positives = 84/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEA SK+FSLDREAFPS+NGLPGETLHSYIAD LEN PWH
Sbjct: 387 KVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRLENIPWHGVDEWMLKDEVNNL 446
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDISRRI LSRERVRQVGLVALEKLK AARKR+L
Sbjct: 447 ISSTLREREREIVRLYYGLDNECLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRL 506
Query: 239 EAMLVKH 219
+AMLVKH
Sbjct: 507 DAMLVKH 513
>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
gi|550325184|gb|EEE95160.2| hypothetical protein
POPTR_0013s07290g [Populus trichocarpa]
Length = 499
Score = 143 bits (360), Expect = 6e-32
Identities = 79/127 (62%), Positives = 84/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEA+SK+FSLDREAFPS+NGLPGET HSYIAD LENNPWH
Sbjct: 373 KVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGVDEWALKEEVNKL 432
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDIS+R+ LSRERVRQVGLVALEKLK AARK KL
Sbjct: 433 IDSALQEREREIIRLYHGLDKECLTWEDISKRMGLSRERVRQVGLVALEKLKHAARKGKL 492
Query: 239 EAMLVKH 219
EAMLVKH
Sbjct: 493 EAMLVKH 499
>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
Length = 502
Score = 143 bits (360), Expect = 6e-32
Identities = 80/127 (62%), Positives = 84/127 (66%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEA SK+FSLDREAFPS+NGLPGETLHSYIAD LEN PWH
Sbjct: 376 KVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRLENIPWHGVDEWMLKDEVNNL 435
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDISRRI LSRERVRQVGLVALEKLK AARKR+L
Sbjct: 436 ISSTLREREREIVRLYYGLDNECLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRL 495
Query: 239 EAMLVKH 219
+AMLVKH
Sbjct: 496 DAMLVKH 502
>gb|AAB81958.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
Length = 502
Score = 142 bits (359), Expect = 8e-32
Identities = 78/127 (61%), Positives = 86/127 (67%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEAVSK+FSLDR+AFPS+NGLPGET HSYIADT LENNPWH
Sbjct: 376 KVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTRLENNPWHGYDDLALKEEVSKL 435
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDIS+RI LSRERVRQVGLVALEKLK AARKRK+
Sbjct: 436 ISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 495
Query: 239 EAMLVKH 219
EAM++K+
Sbjct: 496 EAMILKN 502
>ref|NP_176666.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
gi|75098242|sp|O24629.1|SIGA_ARATH RecName: Full=RNA
polymerase sigma factor sigA; Short=Sigma factor A;
Short=Sigma-A; AltName: Full=RNA polymerase sigma factor
sig1; Short=Atsig1; Short=Sigma factor 1; AltName:
Full=RNA polymerase sigma factor sig2; Short=Atsig2;
Short=Sigma factor 2; AltName: Full=RNA polymerase sigma
factor sigB; Short=Sigma factor B; Short=Sigma-B; Flags:
Precursor gi|5042421|gb|AAD38260.1|AC006193_16 RNA
polymerase sigma subunit 1 [Arabidopsis thaliana]
gi|2353171|gb|AAB69384.1| sigma factor 1 [Arabidopsis
thaliana] gi|2443408|dbj|BAA22421.1| SigA [Arabidopsis
thaliana] gi|2558514|emb|CAA74640.1| plastid RNA
polymerase sigma factor [Arabidopsis thaliana]
gi|5478439|dbj|BAA82448.1| sigma factor SigA
[Arabidopsis thaliana] gi|17064900|gb|AAL32604.1| RNA
polymerase sigma subunit 1 [Arabidopsis thaliana]
gi|20259916|gb|AAM13305.1| RNA polymerase sigma subunit
1 [Arabidopsis thaliana] gi|222423019|dbj|BAH19492.1|
AT1G64860 [Arabidopsis thaliana]
gi|332196177|gb|AEE34298.1| RNA polymerase sigma subunit
1 [Arabidopsis thaliana]
Length = 502
Score = 142 bits (359), Expect = 8e-32
Identities = 78/127 (61%), Positives = 86/127 (67%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEAVSK+FSLDR+AFPS+NGLPGET HSYIADT LENNPWH
Sbjct: 376 KVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTRLENNPWHGYDDLALKEEVSKL 435
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDIS+RI LSRERVRQVGLVALEKLK AARKRK+
Sbjct: 436 ISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 495
Query: 239 EAMLVKH 219
EAM++K+
Sbjct: 496 EAMILKN 502
>dbj|BAA22214.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Length = 502
Score = 142 bits (359), Expect = 8e-32
Identities = 78/127 (61%), Positives = 86/127 (67%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEAVSK+FSLDR+AFPS+NGLPGET HSYIADT LENNPWH
Sbjct: 376 KVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTRLENNPWHGYDDLALKEEVSKL 435
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDIS+RI LSRERVRQVGLVALEKLK AARKRK+
Sbjct: 436 ISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 495
Query: 239 EAMLVKH 219
EAM++K+
Sbjct: 496 EAMILKN 502
>emb|CAA74896.1| sigma factorB [Arabidopsis thaliana]
Length = 500
Score = 142 bits (359), Expect = 8e-32
Identities = 78/127 (61%), Positives = 86/127 (67%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEAVSK+FSLDR+AFPS+NGLPGET HSYIADT LENNPWH
Sbjct: 374 KVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTRLENNPWHGYDDLALKEEVSKL 433
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDIS+RI LSRERVRQVGLVALEKLK AARKRK+
Sbjct: 434 ISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 493
Query: 239 EAMLVKH 219
EAM++K+
Sbjct: 494 EAMILKN 500
>gb|AAG40388.1|AF325036_1 At1g64860 [Arabidopsis thaliana]
Length = 502
Score = 142 bits (359), Expect = 8e-32
Identities = 78/127 (61%), Positives = 86/127 (67%), Gaps = 16/127 (12%)
Frame = -1
Query: 551 KVTNATEAVSKIFSLDREAFPSINGLPGETLHSYIADTCLENNPWH-------------- 414
KV NATEAVSK+FSLDR+AFPS+NGLPGET HSYIADT LENNPWH
Sbjct: 376 KVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTRLENNPWHGYDDLALKEEVSKL 435
Query: 413 --XXXXXXXXXXXXXXXXXXXXCLTWEDISRRIELSRERVRQVGLVALEKLKTAARKRKL 240
CLTWEDIS+RI LSRERVRQVGLVALEKLK AARKRK+
Sbjct: 436 ISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 495
Query: 239 EAMLVKH 219
EAM++K+
Sbjct: 496 EAMILKN 502