BLASTX nr result
ID: Papaver30_contig00045358
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00045358
(489 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prun... 75 1e-15
ref|XP_007226707.1| hypothetical protein PRUPE_ppa020120mg [Prun... 72 1e-13
ref|XP_013738879.1| PREDICTED: uncharacterized protein LOC106441... 78 4e-13
ref|XP_009118154.1| PREDICTED: putative ribonuclease H protein A... 79 2e-12
ref|XP_013738597.1| PREDICTED: uncharacterized protein LOC106441... 64 3e-12
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum] 70 5e-12
ref|XP_013645014.1| PREDICTED: uncharacterized protein LOC106349... 77 7e-12
ref|XP_009148188.1| PREDICTED: uncharacterized protein LOC103871... 77 7e-12
ref|XP_009120002.1| PREDICTED: putative ribonuclease H protein A... 74 2e-11
gb|EMS48207.1| U4/U6 small nuclear ribonucleoprotein Prp31 [Trit... 75 2e-11
ref|XP_013645166.1| PREDICTED: uncharacterized protein LOC106349... 61 2e-11
ref|XP_008228453.1| PREDICTED: putative ribonuclease H protein A... 67 3e-11
ref|XP_009140200.1| PREDICTED: putative ribonuclease H protein A... 70 4e-11
ref|XP_010462630.1| PREDICTED: uncharacterized protein LOC104743... 74 4e-11
ref|XP_013616732.1| PREDICTED: uncharacterized protein LOC106323... 73 5e-11
ref|XP_013732551.1| PREDICTED: uncharacterized mitochondrial pro... 73 6e-11
ref|XP_013654532.1| PREDICTED: uncharacterized protein LOC106359... 73 8e-11
ref|XP_009125370.1| PREDICTED: putative ribonuclease H protein A... 73 8e-11
ref|XP_013624219.1| PREDICTED: uncharacterized protein LOC106330... 72 1e-10
ref|XP_013617132.1| PREDICTED: uncharacterized protein LOC106323... 72 1e-10
>ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
gi|462424248|gb|EMJ28511.1| hypothetical protein
PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 74.7 bits (182), Expect(2) = 1e-15
Identities = 39/119 (32%), Positives = 62/119 (52%)
Frame = +2
Query: 107 FWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVTKIGWRLEKDKDSL*YQL 286
+W S N K +++ +W +C K+ GGL F N+ FN +++ K GWRL ++ DSL ++
Sbjct: 471 WWNSSTENKKIHWM-AWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQNPDSLVTKV 529
Query: 287 MDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWKIGNAKKNIIWEDIWIP 463
+ KY R+ L P W K + + I S W++G+ IWED W+P
Sbjct: 530 LKAKYFPTRSFLETTVSPYASVVW--KSLCDARTVIIQGSRWQVGSGDTIGIWEDRWLP 586
Score = 34.7 bits (78), Expect(2) = 1e-15
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 9 LISCLTSTTSIY*MNCFKLPKQSCQDLNKV 98
LI + IY M+CF LPK C+DLNK+
Sbjct: 437 LIKVVAQAIPIYTMSCFLLPKYVCEDLNKL 466
>ref|XP_007226707.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
gi|462423643|gb|EMJ27906.1| hypothetical protein
PRUPE_ppa020120mg [Prunus persica]
Length = 1011
Score = 72.0 bits (175), Expect(2) = 1e-13
Identities = 39/119 (32%), Positives = 61/119 (51%)
Frame = +2
Query: 107 FWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVTKIGWRLEKDKDSL*YQL 286
+W S N K +++ +W +C K+ GGL F N+ FN +++ K GWRL ++ DSL ++
Sbjct: 719 WWNSSTENKKIHWM-AWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQNPDSLITKV 777
Query: 287 MDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWKIGNAKKNIIWEDIWIP 463
+ KY R+ L W K + E I S W++G+ IWED W+P
Sbjct: 778 LKAKYFPTRSFLETAVSLHASVVW--KSLYEARTVIIQGSRWQVGSGDTIGIWEDRWLP 834
Score = 30.4 bits (67), Expect(2) = 1e-13
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 9 LISCLTSTTSIY*MNCFKLPKQSCQDLNKV 98
LI + IY M+ F LPK C+DLNK+
Sbjct: 685 LIKVVAQAIPIYTMSYFLLPKYVCEDLNKL 714
>ref|XP_013738879.1| PREDICTED: uncharacterized protein LOC106441630 [Brassica napus]
Length = 1222
Score = 77.8 bits (190), Expect(2) = 4e-13
Identities = 42/143 (29%), Positives = 69/143 (48%)
Frame = +2
Query: 56 FQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVT 235
F+ P ++ R Q TRFW S + + SWT + + K GGL F +++ FN +++
Sbjct: 690 FKLPTSLCKRIQSALTRFWWDSDPDQRKISWISWTTMTRAKQDGGLGFRDIQCFNDALLG 749
Query: 236 KIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWK 415
K+ WRL + D L +++ KY +L + W + I G + + +H W
Sbjct: 750 KLSWRLINNPDGLLARILRGKYCKYNPILEVQAASNCSHGW--RSILIGRDLVKEHLGWA 807
Query: 416 IGNAKKNIIWEDIWIPTIYSEVP 484
IGN + IW D W+ T + P
Sbjct: 808 IGNGESVKIWSDAWLSTSHGAQP 830
Score = 23.1 bits (48), Expect(2) = 4e-13
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 9 LISCLTSTTSIY*MNCFKLPKQSCQ 83
L+ + S + M+CFKLP C+
Sbjct: 674 LLKTVLSAMPTHSMSCFKLPTSLCK 698
>ref|XP_009118154.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 538
Score = 78.6 bits (192), Expect = 2e-12
Identities = 45/143 (31%), Positives = 70/143 (48%)
Frame = +2
Query: 56 FQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVT 235
F+ P ++ R Q TRFW +S N K +W + K K GGL F + + FN S++
Sbjct: 238 FKLPVSLCKRIQSIVTRFWWESNENEKKMAWVAWDRIAKPKSCGGLGFRDFQKFNDSLLA 297
Query: 236 KIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWK 415
KIGWR+ + DSL + + KY E +LN W + I G + + ++ W
Sbjct: 298 KIGWRMYQKPDSLLCKTLLGKYCPEGTILNATASSTMSHGW--RGILIGRDLLLENMGWV 355
Query: 416 IGNAKKNIIWEDIWIPTIYSEVP 484
+G+ + +W D W+ T E P
Sbjct: 356 VGDGRAINVWRDPWLATTKRESP 378
>ref|XP_013738597.1| PREDICTED: uncharacterized protein LOC106441311 [Brassica napus]
Length = 1965
Score = 63.5 bits (153), Expect(2) = 3e-12
Identities = 34/118 (28%), Positives = 56/118 (47%)
Frame = +2
Query: 107 FWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVTKIGWRLEKDKDSL*YQL 286
FW SL + + + SW +C K+ GGL F +++ FN +++ K WR+ +SL +L
Sbjct: 825 FWWNSLEHKRKIHWLSWNTLCLAKELGGLGFKDLQSFNQALLAKQAWRILNHPESLFARL 884
Query: 287 MDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWKIGNAKKNIIWEDIWI 460
+Y ++LN P+ W + I G + IGN + +W D WI
Sbjct: 885 FKSRYFEHNDLLNAKNGPRPSYAW--RSIQFGKELLVQGLRKHIGNGETISVWVDNWI 940
Score = 34.7 bits (78), Expect(2) = 3e-12
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 9 LISCLTSTTSIY*MNCFKLPKQSCQDLNKVQRD 107
LI + +Y M+CFK+ K+SCQ+L K D
Sbjct: 792 LIKAVAMAMPVYAMSCFKMTKKSCQNLTKAMAD 824
>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
Length = 593
Score = 70.5 bits (171), Expect(2) = 5e-12
Identities = 38/127 (29%), Positives = 62/127 (48%)
Frame = +2
Query: 107 FWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVTKIGWRLEKDKDSL*YQL 286
+WG K ++ +SW +C+ K GGL F +++FN +M+ K GWRL +SL +
Sbjct: 66 YWGGDRNGSKMHW-RSWEKLCRSKRNGGLGFRRLKNFNRAMLAKQGWRLLTLPNSLAATI 124
Query: 287 MDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWKIGNAKKNIIWEDIWIPT 466
+ KY ++ L + + P W + I +G + W+IG W D WIP
Sbjct: 125 LRAKYYPRKSPLEISSSPYSSYTW--RSILKGSQLLQKGIEWRIGQGNTVRTWSDPWIPG 182
Query: 467 IYSEVPK 487
+ +PK
Sbjct: 183 SDTGLPK 189
Score = 26.9 bits (58), Expect(2) = 5e-12
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 9 LISCLTSTTSIY*MNCFKLPKQSCQDLNKV 98
+I + + S Y M CF+LP+ +C + K+
Sbjct: 32 MIKSVLQSISTYIMGCFELPEGTCDRIEKM 61
>ref|XP_013645014.1| PREDICTED: uncharacterized protein LOC106349563 [Brassica napus]
Length = 741
Score = 76.6 bits (187), Expect = 7e-12
Identities = 43/143 (30%), Positives = 68/143 (47%)
Frame = +2
Query: 56 FQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVT 235
F P ++ R Q +TRFW N + SW + + K GGL F + + FN +++
Sbjct: 202 FLMPVSLCKRLQSAATRFWWDRDENERKMAWISWDSMAQPKANGGLGFRDFQSFNIALLA 261
Query: 236 KIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWK 415
KIGWRL ++ D L +++ KY + N+L W + + G N + ++ W
Sbjct: 262 KIGWRLFQNPDCLLGKVLFGKYCHDSNILQATESSSMSHGW--RSVLAGRNLLLENLGWV 319
Query: 416 IGNAKKNIIWEDIWIPTIYSEVP 484
+GN IW D W+ Y E P
Sbjct: 320 VGNGTSINIWNDPWLSLAYQERP 342
>ref|XP_009148188.1| PREDICTED: uncharacterized protein LOC103871664 [Brassica rapa]
Length = 743
Score = 76.6 bits (187), Expect = 7e-12
Identities = 43/143 (30%), Positives = 68/143 (47%)
Frame = +2
Query: 56 FQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVT 235
F P ++ R Q +TRFW N + SW + + K GGL F + + FN +++
Sbjct: 202 FLMPVSLCKRLQSAATRFWWDRDENERKMAWISWDSMAQPKANGGLGFRDFQSFNIALLA 261
Query: 236 KIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWK 415
KIGWRL ++ D L +++ KY + N+L W + + G N + ++ W
Sbjct: 262 KIGWRLFQNPDCLLGKVLFGKYCHDSNILQATESSSMSHGW--RSVLAGRNLLLENLGWV 319
Query: 416 IGNAKKNIIWEDIWIPTIYSEVP 484
+GN IW D W+ Y E P
Sbjct: 320 VGNGTSINIWNDPWLSLAYQERP 342
>ref|XP_009120002.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa] gi|685302818|ref|XP_009142112.1| PREDICTED:
putative ribonuclease H protein At1g65750 [Brassica
rapa] gi|685350481|ref|XP_009110743.1| PREDICTED:
putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 612
Score = 73.9 bits (180), Expect(2) = 2e-11
Identities = 40/143 (27%), Positives = 69/143 (48%)
Frame = +2
Query: 56 FQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVT 235
F+ P ++ R Q TRFW + + SW+ + K GGL F +++ FN +++
Sbjct: 81 FKLPTSLCKRIQSALTRFWWDPNQDQQKMAWISWSKMTNSKRDGGLGFRDIQSFNDALLG 140
Query: 236 KIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWK 415
K+ WR+ ++ D L +++ KY +L + W + I G + ++ H W
Sbjct: 141 KLSWRILENPDCLLARILQGKYCKYSPLLEVQASQNCSHGW--RSILIGRDLVNKHLGWA 198
Query: 416 IGNAKKNIIWEDIWIPTIYSEVP 484
IGN + IW D W+ T +E P
Sbjct: 199 IGNGETVQIWSDAWLSTTKAETP 221
Score = 21.6 bits (44), Expect(2) = 2e-11
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 48 MNCFKLPKQSCQ 83
M+CFKLP C+
Sbjct: 78 MSCFKLPTSLCK 89
>gb|EMS48207.1| U4/U6 small nuclear ribonucleoprotein Prp31 [Triticum urartu]
Length = 895
Score = 75.1 bits (183), Expect = 2e-11
Identities = 41/137 (29%), Positives = 71/137 (51%)
Frame = +2
Query: 53 LFQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMV 232
+F+ PK I ++FW N K + +W +C KD G+ F + FN +++
Sbjct: 92 VFKIPKKICKGIINAMSQFWWGDEDNQKRMHWMAWWKMCVPKDQDGMGFRYIHCFNLALL 151
Query: 233 TKIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSW 412
K WRL ++ +SL ++ KY L+ ++ M T K+G F+ + I G+ ++ + W
Sbjct: 152 AKQAWRLLENPESLCATIVRAKYFLKDDL--MSTVLKNGSFFTWQSIMAGVVSLRNGYIW 209
Query: 413 KIGNAKKNIIWEDIWIP 463
++G +K IW D WIP
Sbjct: 210 RVGTGEKIDIWRDAWIP 226
>ref|XP_013645166.1| PREDICTED: uncharacterized protein LOC106349740 [Brassica napus]
Length = 1377
Score = 60.8 bits (146), Expect(2) = 2e-11
Identities = 34/118 (28%), Positives = 56/118 (47%)
Frame = +2
Query: 107 FWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVTKIGWRLEKDKDSL*YQL 286
FW SL + + + SWT + K+ GGL F +++ FN S++ K WR+ +SL +L
Sbjct: 828 FWWNSLEHKRKIHWLSWTKMSMAKEQGGLGFKDIQLFNQSLLAKQAWRILNHPESLFARL 887
Query: 287 MDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWKIGNAKKNIIWEDIWI 460
+Y + L+ P+ W + I G + ++GN K +W D WI
Sbjct: 888 FKSRYFENGDFLSAGNGPRPSYGW--RSIQFGKELLQQGIRKQLGNGKSMSVWVDEWI 943
Score = 34.3 bits (77), Expect(2) = 2e-11
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 9 LISCLTSTTSIY*MNCFKLPKQSCQDLNKVQRD 107
LI + +Y M+CFKL K+SC++L K D
Sbjct: 795 LIKAVAMAMPVYAMSCFKLTKKSCENLTKAMAD 827
>ref|XP_008228453.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 658
Score = 67.0 bits (162), Expect(2) = 3e-11
Identities = 35/119 (29%), Positives = 61/119 (51%)
Frame = +2
Query: 107 FWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVTKIGWRLEKDKDSL*YQL 286
FW + + +W +C+ KD GGL F ++ FN +M+ K GWRL + DSL ++
Sbjct: 195 FWWNGNNGDRKIHWLAWDKLCQPKDVGGLGFRDLYAFNLAMLAKQGWRLIQYPDSLIARV 254
Query: 287 MDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWKIGNAKKNIIWEDIWIP 463
+ KY +++ L D D ++ K I + S W++G+ + IW++ W+P
Sbjct: 255 LRAKYFPDKSFL--DVPVSDNSSYVWKSICAARKILLQGSRWQVGSGAEIDIWKEPWLP 311
Score = 27.7 bits (60), Expect(2) = 3e-11
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 9 LISCLTSTTSIY*MNCFKLPKQSCQDLNKVQRD 107
LI + +Y M+ + LPK C DLN++ D
Sbjct: 162 LIKTVAQAIPLYSMSVYLLPKYFCDDLNRLIAD 194
>ref|XP_009140200.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 1086
Score = 69.7 bits (169), Expect(2) = 4e-11
Identities = 36/135 (26%), Positives = 64/135 (47%)
Frame = +2
Query: 56 FQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVT 235
F+ P+++ R Q TRFW + SW + K K GGL F + E FN + +
Sbjct: 557 FKLPRSLCKRIQSAVTRFWWDGRSGNRKMAWVSWDKMTKSKQDGGLGFRDFESFNDAYLA 616
Query: 236 KIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWK 415
K+GWR+ + L +++ KY + L + + + W + + G + + ++ W
Sbjct: 617 KLGWRIHNNPSGLLSRVLTGKYCTDTPFLQVAHRSAESHGW--RGVLIGRDLMMSNAGWA 674
Query: 416 IGNAKKNIIWEDIWI 460
+GN + IW D W+
Sbjct: 675 LGNGESINIWSDPWL 689
Score = 24.6 bits (52), Expect(2) = 4e-11
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 LISCLTSTTSIY*MNCFKLPKQSCQ 83
L S LT S Y M CFKLP+ C+
Sbjct: 542 LKSVLTPVPS-YSMTCFKLPRSLCK 565
>ref|XP_010462630.1| PREDICTED: uncharacterized protein LOC104743220 [Camelina sativa]
Length = 746
Score = 73.9 bits (180), Expect = 4e-11
Identities = 42/137 (30%), Positives = 67/137 (48%)
Frame = +2
Query: 56 FQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVT 235
F+ P ++ R Q TRFW + + +WT + + K+ GGL F +ME FN +++
Sbjct: 216 FKLPGSLCKRIQSVLTRFWWDDKPDKQKMSWVAWTKLTRPKNAGGLGFRDMERFNDALLA 275
Query: 236 KIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWK 415
KI WRL K+ ++L +++ KY + + W + I G N I + W
Sbjct: 276 KIAWRLLKEPNTLLARVLLGKYCHSYSFMECSIPSNPSHGW--RSIMAGRNVIKQGAGWL 333
Query: 416 IGNAKKNIIWEDIWIPT 466
IGN + IW D W+ T
Sbjct: 334 IGNGESVKIWRDPWLST 350
>ref|XP_013616732.1| PREDICTED: uncharacterized protein LOC106323109 [Brassica oleracea
var. oleracea]
Length = 1090
Score = 73.2 bits (178), Expect(2) = 5e-11
Identities = 41/135 (30%), Positives = 66/135 (48%)
Frame = +2
Query: 56 FQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVT 235
F+ PK++++R Q TRFW K SWT + + KD GGL F + E FN + +
Sbjct: 580 FKLPKSLITRIQSAVTRFWWDDKDGKKKIDWVSWTKMTQPKDKGGLGFRDFESFNDAYLA 639
Query: 236 KIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWK 415
K+ WRL + L +++ KY + L K + W + + G + I ++ W
Sbjct: 640 KLSWRLIHNPSCLLSRILQGKYFGNSSFLEASNKAVESHGW--RGLMIGRDLILKNTGWV 697
Query: 416 IGNAKKNIIWEDIWI 460
+GN + IWE W+
Sbjct: 698 VGNGESINIWEAPWL 712
Score = 20.8 bits (42), Expect(2) = 5e-11
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 9 LISCLTSTTSIY*MNCFKLPK 71
+++ + S + M CFKLPK
Sbjct: 564 MLNSVLSPIPSHAMTCFKLPK 584
>ref|XP_013732551.1| PREDICTED: uncharacterized mitochondrial protein AtMg00310-like
[Brassica napus]
Length = 209
Score = 72.8 bits (177), Expect(2) = 6e-11
Identities = 40/135 (29%), Positives = 67/135 (49%)
Frame = +2
Query: 56 FQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVT 235
F+ PK++++R Q T+FW K SWT + + KD GGL F + E FN + +
Sbjct: 19 FKLPKSLITRIQSAVTKFWWDDKDGKKKIDWVSWTKMTQPKDKGGLGFRDFESFNDAYLA 78
Query: 236 KIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWK 415
K+ WRL + L +++ KY + + L K + W + + G + I ++ W
Sbjct: 79 KLSWRLIHNPSCLLSRILQGKYFGDSSFLEASNKTVESHGW--RGLMIGRDLILKNTGWV 136
Query: 416 IGNAKKNIIWEDIWI 460
+GN + IWE W+
Sbjct: 137 VGNGESINIWEAPWL 151
Score = 20.8 bits (42), Expect(2) = 6e-11
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 9 LISCLTSTTSIY*MNCFKLPK 71
+++ + S + M CFKLPK
Sbjct: 3 MLNSVLSLIPSHAMTCFKLPK 23
>ref|XP_013654532.1| PREDICTED: uncharacterized protein LOC106359365 [Brassica napus]
Length = 1233
Score = 72.8 bits (177), Expect(2) = 8e-11
Identities = 38/143 (26%), Positives = 70/143 (48%)
Frame = +2
Query: 56 FQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVT 235
F+ P ++ R Q TRFW + K +W + + K GGL F +++ FN + +
Sbjct: 697 FELPVSLCKRIQSALTRFWWDDSMDSKKMAWIAWEKLIRPKQQGGLDFRDIQSFNQAFLA 756
Query: 236 KIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWK 415
K+ WR+ + D L +++ KY + ++L + K W + + G + I ++SW+
Sbjct: 757 KLSWRIINNPDCLLGRILIGKYCITEDILTVPAKSAISHGW--RGVLSGRDVIMSNASWE 814
Query: 416 IGNAKKNIIWEDIWIPTIYSEVP 484
+GN + IW+ W+ E P
Sbjct: 815 VGNGESINIWDKPWLSCTAPERP 837
Score = 20.4 bits (41), Expect(2) = 8e-11
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +3
Query: 9 LISCLTSTTSIY*MNCFKLPKQSCQ 83
++ + S + M+CF+LP C+
Sbjct: 681 MLKSVLSAVPSHAMSCFELPVSLCK 705
>ref|XP_009125370.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 943
Score = 72.8 bits (177), Expect(2) = 8e-11
Identities = 38/143 (26%), Positives = 70/143 (48%)
Frame = +2
Query: 56 FQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSMVT 235
F+ P ++ R Q TRFW + K +W + + K GGL F +++ FN + +
Sbjct: 431 FELPVSLCRRIQSALTRFWWDDRMDSKKMAWIAWEKLIRPKQQGGLDFRDIQSFNQAFLA 490
Query: 236 KIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSSWK 415
K+ WR+ + D L +++ KY + ++L + K W + + G + I ++SW+
Sbjct: 491 KLSWRIINNPDCLLGRILIEKYCITEDILTVTAKSAISHGW--RGVLSGRDVIMSNASWE 548
Query: 416 IGNAKKNIIWEDIWIPTIYSEVP 484
+GN + IW+ W+ E P
Sbjct: 549 VGNGESINIWDKPWLSCTAPERP 571
Score = 20.4 bits (41), Expect(2) = 8e-11
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +3
Query: 9 LISCLTSTTSIY*MNCFKLPKQSCQ 83
++ + S + M+CF+LP C+
Sbjct: 415 MLKSVLSAVPSHAMSCFELPVSLCR 439
>ref|XP_013624219.1| PREDICTED: uncharacterized protein LOC106330263 [Brassica oleracea
var. oleracea]
Length = 650
Score = 72.4 bits (176), Expect = 1e-10
Identities = 39/137 (28%), Positives = 66/137 (48%)
Frame = +2
Query: 50 ELFQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSM 229
+ F+ P+++ R Q TRFW S + L +W + K K GGL F +++ FN ++
Sbjct: 197 QCFKLPQSLCKRIQSALTRFWWDSKEGKRGMSLVAWDTMIKSKRDGGLGFRDIQSFNDAL 256
Query: 230 VTKIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSS 409
+ KI WR+ SL ++ KY + L++ W + I G + I++
Sbjct: 257 LAKISWRILSSASSLLASVLAGKYFHNQEFLHVKAPSACSHGW--RGILIGRDLINEQLG 314
Query: 410 WKIGNAKKNIIWEDIWI 460
W IGN + +W D W+
Sbjct: 315 WAIGNGESVSVWNDQWL 331
>ref|XP_013617132.1| PREDICTED: uncharacterized protein LOC106323580 [Brassica oleracea
var. oleracea]
Length = 605
Score = 72.4 bits (176), Expect = 1e-10
Identities = 35/136 (25%), Positives = 67/136 (49%)
Frame = +2
Query: 50 ELFQTPKTIMSRSQ*GSTRFWGKSLYNPKCYYLKSWTVVCKLKDTGGLSFMNMEHFNSSM 229
+ F+ P+++ R Q TRFW + L +W + K K GGL F +++ FN ++
Sbjct: 347 QCFKLPQSLCKRIQSALTRFWWDPKAGDRGMALVAWNTMVKSKSDGGLEFRDIQSFNDAL 406
Query: 230 VTKIGWRLEKDKDSL*YQLMDVKYLLERNVLNMDTKPKDGDFWI*KVIPEGINNIHDHSS 409
+ K+ WR+ L +++ KY ++++L + W + I G + + +H
Sbjct: 407 LAKVSWRILTSPSCLLARVLAGKYFHDQDILTVQPPAACSHGW--RGILIGRDMLKEHLG 464
Query: 410 WKIGNAKKNIIWEDIW 457
W IG+ + + W+D W
Sbjct: 465 WAIGDGQSALAWQDSW 480