BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00045326
         (555 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010246174.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...    65   2e-10
ref|XP_008789679.1| PREDICTED: probable RNA polymerase II transc...    67   4e-09
ref|XP_008789678.1| PREDICTED: probable RNA polymerase II transc...    67   4e-09
gb|KMZ67631.1| General transcription factor IIH subunit [Zostera...    67   6e-09
ref|XP_008800224.1| PREDICTED: probable RNA polymerase II transc...    67   6e-09
ref|XP_008800215.1| PREDICTED: probable RNA polymerase II transc...    67   6e-09
ref|XP_008800208.1| PREDICTED: probable RNA polymerase II transc...    67   6e-09
ref|XP_008800199.1| PREDICTED: probable RNA polymerase II transc...    67   6e-09
ref|XP_010913638.1| PREDICTED: probable RNA polymerase II transc...    65   2e-08
ref|XP_010928645.1| PREDICTED: probable RNA polymerase II transc...    65   3e-08
gb|ERN19104.1| hypothetical protein AMTR_s00061p00135540 [Ambore...    50   1e-06
ref|XP_011628233.1| PREDICTED: probable RNA polymerase II transc...    50   1e-06
ref|XP_004972833.1| PREDICTED: probable RNA polymerase II transc...    58   3e-06

>ref|XP_010246174.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA polymerase II
           transcription factor B subunit 1-1 [Nelumbo nucifera]
          Length = 611

 Score = 65.1 bits (157), Expect(2) = 2e-10
 Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
 Frame = -1

Query: 273 GVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQ---KQALLLY*YRTYIWE**KF* 103
           G+L MTEDK  F+P++   S +L+V F SI+G + ++   KQALL     T   E     
Sbjct: 24  GILRMTEDKFVFTPNEPMSSGKLSVSFGSIKGHKFTKEGSKQALLNL---TQDPEMGGGY 80

Query: 102 TFEFDKFAQRDICLEFVKKVVGKIQATTQS 13
            FEFDKF+ RD+C +FV KV+GKIQ+   S
Sbjct: 81  IFEFDKFSDRDVCRDFVGKVLGKIQSMVSS 110



 Score = 26.9 bits (58), Expect(2) = 2e-10
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 343 MACSLVVMRARYKNNGVMDPGVQG 272
           MA   VVM A+YK     +PG+ G
Sbjct: 1   MAAGQVVMNAKYKKTSPKEPGIPG 24


>ref|XP_008789679.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Phoenix dactylifera]
          Length = 606

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
 Frame = -1

Query: 273 GVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQ---KQALLLY*YRTYIWE**KF* 103
           GVL M+E+K+ F P+D + + +LNV+FRSI+G + S+   KQALL     T   E     
Sbjct: 21  GVLKMSEEKIIFIPNDPRSAMKLNVDFRSIKGHKFSKDGSKQALL---NLTQDSEKGGGY 77

Query: 102 TFEFDKFAQRDICLEFVKKVVGKIQATTQS 13
            FEFDKF+ R++C +FV KV+GK QA   S
Sbjct: 78  IFEFDKFSDRNVCRDFVGKVLGKFQAMMSS 107


>ref|XP_008789678.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Phoenix dactylifera]
          Length = 607

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
 Frame = -1

Query: 273 GVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQ---KQALLLY*YRTYIWE**KF* 103
           GVL M+E+K+ F P+D + + +LNV+FRSI+G + S+   KQALL     T   E     
Sbjct: 21  GVLKMSEEKIIFIPNDPRSAMKLNVDFRSIKGHKFSKDGSKQALL---NLTQDSEKGGGY 77

Query: 102 TFEFDKFAQRDICLEFVKKVVGKIQATTQS 13
            FEFDKF+ R++C +FV KV+GK QA   S
Sbjct: 78  IFEFDKFSDRNVCRDFVGKVLGKFQAMMSS 107


>gb|KMZ67631.1| General transcription factor IIH subunit [Zostera marina]
          Length = 584

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 36/90 (40%), Positives = 54/90 (60%)
 Frame = -1

Query: 273 GVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQKQALLLY*YRTYIWE**KF*TFE 94
           GVL+MTEDK  F+P+D   ++ L+VEFRSI+G + S+  +  +    TY  +      FE
Sbjct: 21  GVLLMTEDKFAFTPNDPNSNANLDVEFRSIKGHKFSKDGSKQILLNLTYDSQKGGGYIFE 80

Query: 93  FDKFAQRDICLEFVKKVVGKIQATTQSSAP 4
           FD FA R+ C ++V  V+GK+Q    +  P
Sbjct: 81  FDNFANRNFCRDYVGTVLGKLQCAPSAVPP 110


>ref|XP_008800224.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X4 [Phoenix dactylifera]
          Length = 567

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
 Frame = -1

Query: 273 GVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQ---KQALLLY*YRTYIWE**KF* 103
           GVL M+EDK  F P+D + + +LNV FR+I+G + S+   KQALL     T   E     
Sbjct: 21  GVLRMSEDKFIFVPNDPRSAMKLNVNFRNIKGHKFSKDGSKQALLNL---TQDSEKGGGY 77

Query: 102 TFEFDKFAQRDICLEFVKKVVGKIQATTQS 13
            FEFD F+ R++C +FV KV+GK QA T S
Sbjct: 78  IFEFDNFSDRNVCRDFVGKVLGKFQAVTSS 107


>ref|XP_008800215.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X3 [Phoenix dactylifera]
          Length = 607

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
 Frame = -1

Query: 273 GVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQ---KQALLLY*YRTYIWE**KF* 103
           GVL M+EDK  F P+D + + +LNV FR+I+G + S+   KQALL     T   E     
Sbjct: 21  GVLRMSEDKFIFVPNDPRSAMKLNVNFRNIKGHKFSKDGSKQALLNL---TQDSEKGGGY 77

Query: 102 TFEFDKFAQRDICLEFVKKVVGKIQATTQS 13
            FEFD F+ R++C +FV KV+GK QA T S
Sbjct: 78  IFEFDNFSDRNVCRDFVGKVLGKFQAVTSS 107


>ref|XP_008800208.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Phoenix dactylifera]
          Length = 626

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
 Frame = -1

Query: 273 GVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQ---KQALLLY*YRTYIWE**KF* 103
           GVL M+EDK  F P+D + + +LNV FR+I+G + S+   KQALL     T   E     
Sbjct: 21  GVLRMSEDKFIFVPNDPRSAMKLNVNFRNIKGHKFSKDGSKQALLNL---TQDSEKGGGY 77

Query: 102 TFEFDKFAQRDICLEFVKKVVGKIQATTQS 13
            FEFD F+ R++C +FV KV+GK QA T S
Sbjct: 78  IFEFDNFSDRNVCRDFVGKVLGKFQAVTSS 107


>ref|XP_008800199.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Phoenix dactylifera]
          Length = 627

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
 Frame = -1

Query: 273 GVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQ---KQALLLY*YRTYIWE**KF* 103
           GVL M+EDK  F P+D + + +LNV FR+I+G + S+   KQALL     T   E     
Sbjct: 21  GVLRMSEDKFIFVPNDPRSAMKLNVNFRNIKGHKFSKDGSKQALLNL---TQDSEKGGGY 77

Query: 102 TFEFDKFAQRDICLEFVKKVVGKIQATTQS 13
            FEFD F+ R++C +FV KV+GK QA T S
Sbjct: 78  IFEFDNFSDRNVCRDFVGKVLGKFQAVTSS 107


>ref|XP_010913638.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Elaeis guineensis]
          Length = 606

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
 Frame = -1

Query: 273 GVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQ---KQALLLY*YRTYIWE**KF* 103
           GVL M+EDK  F P+D + + +LNV+FR+I+G + S+   KQALL     T   E     
Sbjct: 21  GVLRMSEDKFIFVPNDPRSAMKLNVDFRNIKGHKFSKDGSKQALL---NLTQDSEKGGGY 77

Query: 102 TFEFDKFAQRDICLEFVKKVVGKIQATTQS 13
            FEFD F+ R++C +FV KV+GK QA   S
Sbjct: 78  IFEFDNFSDRNVCRDFVGKVLGKFQAMMSS 107


>ref|XP_010928645.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Elaeis guineensis]
          Length = 607

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
 Frame = -1

Query: 273 GVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQ---KQALLLY*YRTYIWE**KF* 103
           GVL M+E+K  F P+D + + +LNV+FRSI+G + S+   KQALL     T   E     
Sbjct: 21  GVLKMSEEKFIFIPNDPRSAMKLNVDFRSIKGHKFSKDGSKQALL---NLTQDSEKGGGY 77

Query: 102 TFEFDKFAQRDICLEFVKKVVGKIQATTQS 13
            FEFD F+ R++C +FV KV+GK QA   S
Sbjct: 78  IFEFDNFSNRNVCRDFVGKVLGKFQALMSS 107


>gb|ERN19104.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
          Length = 626

 Score = 50.1 bits (118), Expect(2) = 1e-06
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
 Frame = -1

Query: 273 GVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQ---KQALLLY*YRTYIWE**KF* 103
           GVL M +D   F P+D   S +L+V FR I+G + S+   KQALL         +     
Sbjct: 24  GVLTMRDDSFIFRPNDPSSSVKLDVSFRCIKGHKFSKEGSKQALL-----NLTQDKGGGY 78

Query: 102 TFEFDKFAQRDICLEFVKKVVGKIQATTQS 13
            FEF  F  RD+C + V +V+G++Q    S
Sbjct: 79  MFEFANFKDRDVCRDLVGRVLGRLQCLPPS 108



 Score = 28.9 bits (63), Expect(2) = 1e-06
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 331 LVVMRARYKNNGVMDPGVQG 272
           +V MRA+YK +G  DPGV G
Sbjct: 5   VVTMRAKYKASGPKDPGVAG 24


>ref|XP_011628233.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-3 [Amborella trichopoda]
          Length = 606

 Score = 50.1 bits (118), Expect(2) = 1e-06
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
 Frame = -1

Query: 273 GVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQ---KQALLLY*YRTYIWE**KF* 103
           GVL M +D   F P+D   S +L+V FR I+G + S+   KQALL         +     
Sbjct: 24  GVLTMRDDSFIFRPNDPSSSVKLDVSFRCIKGHKFSKEGSKQALL-----NLTQDKGGGY 78

Query: 102 TFEFDKFAQRDICLEFVKKVVGKIQATTQS 13
            FEF  F  RD+C + V +V+G++Q    S
Sbjct: 79  MFEFANFKDRDVCRDLVGRVLGRLQCLPPS 108



 Score = 28.9 bits (63), Expect(2) = 1e-06
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 331 LVVMRARYKNNGVMDPGVQG 272
           +V MRA+YK +G  DPGV G
Sbjct: 5   VVTMRAKYKASGPKDPGVAG 24


>ref|XP_004972833.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Setaria italica]
          Length = 604

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 36/98 (36%), Positives = 54/98 (55%)
 Frame = -1

Query: 315 LGIRTMVSWILVFKGVLIMTEDKLDFSPDDLKPSSRLNVEFRSIEGQRISQKQALLLY*Y 136
           +G  T+ +      GVL M ED+  F+P+D + + +LNV+FRSI+  +   KQA  L   
Sbjct: 18  MGSMTIGATYKATPGVLRMDEDEFTFTPNDTRSAMKLNVDFRSIKCHKFGSKQARSLLKL 77

Query: 135 RTYIWE**KF*TFEFDKFAQRDICLEFVKKVVGKIQAT 22
                E   +  FEFD  A RD C +F+ +V+G+ Q T
Sbjct: 78  CRDPGEGGDY-MFEFDNVADRDQCRDFIARVLGQHQGT 114