BLASTX nr result
ID: Papaver30_contig00045256
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00045256
(2972 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera] 669 0.0
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera] 557 0.0
ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392... 565 0.0
emb|CAB75932.1| putative protein [Arabidopsis thaliana] 551 0.0
gb|KOM33859.1| hypothetical protein LR48_Vigan02g000900 [Vigna a... 551 0.0
gb|AIC77183.1| polyprotein [Gossypium barbadense] 546 0.0
emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera] 461 0.0
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 504 0.0
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi... 508 0.0
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768... 508 0.0
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana] 508 0.0
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 444 0.0
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 431 0.0
gb|ABW74566.1| integrase [Boechera divaricarpa] 422 0.0
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 685 0.0
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza... 398 0.0
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group] 447 0.0
ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group] g... 422 0.0
emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group] 417 0.0
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ... 417 0.0
>emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
Length = 1246
Score = 669 bits (1727), Expect(2) = 0.0
Identities = 334/604 (55%), Positives = 423/604 (70%), Gaps = 22/604 (3%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R M+I NKM HG+ +DV I+EK+LRSMT F++VV SIEESHD+D LSID+L SSL++
Sbjct: 101 RTMAIVNKMXIHGDKTEDVTIVEKILRSMTPXFNFVVCSIEESHDIDELSIDELQSSLLV 160
Query: 2790 HEQRINQHETVEQALQL---------------QHXXXXXXXXXXXXXXKHCDENSKDKGS 2656
HE++ NQ E EQAL+ + +H ++++ +G
Sbjct: 161 HERKFNQQEKEEQALKASTENHLATRGDRGRGRSRGRGRGNYDRGNQHQHQRQDNRFQGR 220
Query: 2655 NNKGD-------QPFDKSKMQCRRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETEISL 2497
G+ + DKS ++C R RYGH++ CR N++K+ ER+NFAEK++E +SL
Sbjct: 221 GQGGNYSTTYKSRSTDKSNVECYRCHRYGHYKSECRTNMNKQGEERTNFAEKEEE--VSL 278
Query: 2496 LMACHHQEEIDHRNDMCYLDTGSSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*D 2317
LMACH + H N + Y+DT SNHMCGDKS FSDLDETF ++V FGDNS ++V G
Sbjct: 279 LMACHANQGT-HXN-LWYIDTXCSNHMCGDKSAFSDLDETFRNSVTFGDNSKVSVMGKGS 336
Query: 2316 IKFQAKNNTQQVISNVFYVPGLKSNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQ 2137
++ +K + ++ISNVF+VP LK+ LLSVGQL EKGYE+ +K+GVCRI+D K GLI QV
Sbjct: 337 VRIHSKEKSDKIISNVFFVPDLKTTLLSVGQLQEKGYEIFIKDGVCRIQDEKLGLIAQVN 396
Query: 2136 MTRNRMFPLFLRNDVLPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQ 1957
MT NRMFPL+L N CFS + + WLWH RYGHLNF L L ++MV GLP I
Sbjct: 397 MTTNRMFPLYLDNTTQNCFSVKLMDEGWLWHFRYGHLNFXXLKTLQXKNMVTGLPXIQTX 456
Query: 1956 EQLCEGCVVGKQNRDSFPKESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSR 1777
Q+CE CV GKQ+R FPK WR KVLELVH+DICGPI P SNG KRYFITFI D+S
Sbjct: 457 SQICEECVXGKQHRYQFPKGKSWRXNKVLELVHSDICGPINPTSNGGKRYFITFIXDYSW 516
Query: 1776 KTWVYFLNAKSEAFSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQ 1597
KTWVYFL KSEAFS FK FK+LVEK+A IK RSD GGEY S EF +FC+ GI++Q
Sbjct: 517 KTWVYFLQEKSEAFSTFKSFKMLVEKEAXKPIKIFRSDXGGEYTSQEFVNFCENHGIQKQ 576
Query: 1596 FTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINM 1417
TAA++PQQNG +ERKN TILNMV ++L +P+ FWPE V W++++LNRSPT V N+
Sbjct: 577 LTAAYSPQQNGXSERKNXTILNMVXTILSKGHIPRSFWPEAVIWSIHILNRSPTLVVQNV 636
Query: 1416 TPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPI 1237
TP EAW+G KP V+H R+FGCIAYAH+ D+KR KLDDKG KCIFLG S++SKAYK ++PI
Sbjct: 637 TPEEAWNGXKPSVNHFRIFGCIAYAHIPDQKRNKLDDKGEKCIFLGVSEMSKAYKLYNPI 696
Query: 1236 TKKI 1225
TKKI
Sbjct: 697 TKKI 700
Score = 354 bits (909), Expect(2) = 0.0
Identities = 193/384 (50%), Positives = 237/384 (61%), Gaps = 5/384 (1%)
Frame = -1
Query: 1235 QKKLISRDIVFDETRFWNWKTNDVDEFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHIAT 1056
+K +IS DI+FDE FW W N + ++ +F G E P+ Q I
Sbjct: 698 KKIVISHDIIFDEGSFWKWDDNTTKQ--QIQANFDGENEEERQQPL--------QQRIPA 747
Query: 1055 PNAPTEQGXXXXXXXXXXXXXXXXSVAT--SRPRRTINRPSWMEDYQLQVSGDDSSQ--- 891
P + AT S R RP+WM DY+ V+G D S+
Sbjct: 748 AKIPPNEAPTTAETSPTTPEFDEQVEATVGSSSHRVRKRPAWMSDYE--VTGIDQSEDPL 805
Query: 890 IHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKT 711
H ALF DP +F+ V++ KW AMD EI AI++ +TWEL++LP GHK IGVKWVYKT
Sbjct: 806 THFALFLDCDPTTFESAVKESKWRKAMDXEIVAIERNDTWELSELPXGHKTIGVKWVYKT 865
Query: 710 KYNSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDV 531
K +G VDK KA +V KGY QE VDY EVF+PVARHDTI+L+IALAAQNSWP+FQLDV
Sbjct: 866 KLKENGEVDKYKAXLVAKGYKQEFGVDYKEVFAPVARHDTIRLVIALAAQNSWPIFQLDV 925
Query: 530 KSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGF 351
SAFL+G+L+E V+VDQPPGY++ +E KVYRL+K LYGLKQ PRAWYSRIEAYF+K
Sbjct: 926 ISAFLHGNLEEQVFVDQPPGYIKVKNEHKVYRLKKXLYGLKQGPRAWYSRIEAYFLK--- 982
Query: 350 QKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHY 171
DDLI+T ND +++E FK SMM EFEMSDLGM+HY
Sbjct: 983 -------------------------EDDLIFTGNDSVMFERFKKSMMVEFEMSDLGMMHY 1017
Query: 170 FLGLEVVQSSGGTFLS*KKYVSEI 99
FLG+EVVQS G F+S KKYV EI
Sbjct: 1018 FLGIEVVQSDTGIFISQKKYVQEI 1041
>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
Length = 1265
Score = 557 bits (1435), Expect(2) = 0.0
Identities = 289/569 (50%), Positives = 377/569 (66%), Gaps = 2/569 (0%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R ++IANKM+++GEN DVV++EK+LRSMT KFDYVV SIEES D +TL+ID+L SSL++
Sbjct: 137 RTLTIANKMKANGENKGDVVVVEKILRSMTPKFDYVVCSIEESKDTNTLTIDELQSSLLV 196
Query: 2790 HEQRINQHETVEQALQLQHXXXXXXXXXXXXXXKHCDENSKDKGSNNKGDQPFDKSKMQC 2611
HEQR++ H E AL++ H S +G Q F+K+ ++C
Sbjct: 197 HEQRMSSHVEEEHALKITHGDQYGGRGRG--------RGSFGGRGRGRGRQYFNKATVEC 248
Query: 2610 RRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETEISLLMACHHQEEIDHRNDMCYLDTG 2431
+ G+F+ C SK+N +N+A+ +E LLMA + HR DM +LD+G
Sbjct: 249 YNCHKLGNFKWECP---SKEN--EANYADTQEEM---LLMAYVDMNKA-HREDMWFLDSG 299
Query: 2430 SSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGL 2251
SNHMCG K +F D D +F +VK G+N+++ V G VFYVP L
Sbjct: 300 CSNHMCGTKEYFLDFDGSFRDSVKLGNNTSMVVTG----------------KGVFYVPEL 343
Query: 2250 KSNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLP--CFS 2077
K+NLLS+GQL EKG + ++G C++ P+RG+IT+++M+ NRMF L + + CF+
Sbjct: 344 KNNLLSIGQLQEKGLTILFQSGKCKVFHPERGVITEMKMSSNRMFMLHAISQPIASTCFN 403
Query: 2076 SIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKE 1897
+I + LWH RYGHL+FKGL L Q+ MV GLPQ+ +LC+ C+VGKQ R SFP +
Sbjct: 404 AITEDIVHLWHCRYGHLSFKGLKTLQQKKMVNGLPQLKSPLRLCKDCLVGKQQRYSFPWK 463
Query: 1896 SKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFLNAKSEAFSVFKEF 1717
S WRA ++L LVH DI GPI P+SN KRY ITF DDFSRKTWVYFL KSEAF VFK F
Sbjct: 464 STWRASQILXLVHADIXGPIKPISNSKKRYLITFTDDFSRKTWVYFLIEKSEAFVVFKRF 523
Query: 1716 KVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTI 1537
K+ VEK+ I+ L +DRGGE+ S EF +FC +GI+RQ TAA+TPQQN V ERKNRTI
Sbjct: 524 KIHVEKETNSFIRALXTDRGGEFTSXEFTNFCDVNGIRRQLTAAYTPQQNXVXERKNRTI 583
Query: 1536 LNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFG 1357
+NMVRS++ +PK FWPE V WTV+VLNRSPT +V N TP EAWSG KP V H RVFG
Sbjct: 584 MNMVRSMISEKKIPKPFWPEAVNWTVHVLNRSPTLAVQNKTPXEAWSGVKPSVEHFRVFG 643
Query: 1356 CIAYAHVTDEKRKKLDDKGVKCIFLGYSD 1270
CI++ HV D KR KLDDK + C+ LG S+
Sbjct: 644 CISHVHVPDNKRTKLDDKSLSCVLLGVSE 672
Score = 358 bits (918), Expect(2) = 0.0
Identities = 179/385 (46%), Positives = 250/385 (64%), Gaps = 13/385 (3%)
Frame = -1
Query: 1214 DIVFDETRFWNW------------KTNDVDEFIPVEDDFVGSTSPEIHTPVISPPSSPEP 1071
D+VF+E + W+W + D++E + D+ T ++ + + +
Sbjct: 674 DVVFEEHKNWDWDKTYEKSIVCDLEWGDLEEEATMFDENEEGTESDLEADIEAEEDNFSS 733
Query: 1070 QHIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQL-QVSGDDSS 894
+ ++P+ S R P+WM DY + + ++ +
Sbjct: 734 DSLTEDSSPS-----------------------STAERIRRPPAWMRDYDIGEGLSEEDN 770
Query: 893 QIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYK 714
+ HLA+FA +DP+ F+D V+ KW AMD E+ AI+K TWEL +LP G K IGVKW+YK
Sbjct: 771 EAHLAMFAAADPIHFEDAVKSEKWKKAMDLELAAINKNGTWELTELPEGGKKIGVKWIYK 830
Query: 713 TKYNSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLD 534
TK+N +G VDK KAR+V KGY Q+ VDY EVF+PVAR +TI+L++ALAAQ W ++QLD
Sbjct: 831 TKFNENGEVDKYKARLVAKGYTQQHGVDYTEVFAPVARMETIRLVVALAAQRKWTIYQLD 890
Query: 533 VKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMG 354
VKSAFL+G+L E V+V+QP GYV+KG E+KVY+L+KALYGLKQAP AWYS IEAYF+K G
Sbjct: 891 VKSAFLHGELNEEVFVEQPCGYVQKGHEQKVYKLKKALYGLKQAPXAWYSXIEAYFMKEG 950
Query: 353 FQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLH 174
F+K +E TLF++ + +G L+V LYVDDLI+T ND L++ +FK SM EF+M+DLG +
Sbjct: 951 FEKCDYEHTLFIKTRKEGKVLIVSLYVDDLIFTGNDELMFTDFKRSMKDEFDMTDLGKMR 1010
Query: 173 YFLGLEVVQSSGGTFLS*KKYVSEI 99
YFLGLEV+Q S G F+S KKY E+
Sbjct: 1011 YFLGLEVLQRSDGIFISQKKYALEV 1035
>ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
napus]
Length = 2682
Score = 564 bits (1453), Expect(3) = 0.0
Identities = 292/611 (47%), Positives = 401/611 (65%), Gaps = 25/611 (4%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R +++ N ++ +GE +D+V I+EKVLRS+ SKF+++V IEE+ D++T++++QL SL
Sbjct: 147 RVLTVTNNLKRNGEKLDEVRIMEKVLRSLDSKFEHIVTIIEETKDLETMTMEQLLGSLQA 206
Query: 2790 HEQRINQHET-VEQALQLQ-----------------HXXXXXXXXXXXXXXKHCDE---- 2677
+E++ + E VEQ L+++ H + D
Sbjct: 207 YEEKKKKKEDIVEQVLKMRIDHKEESGRSNLRRGGGHFRGRGCGVNGRGWRPYEDNFNQR 266
Query: 2676 ---NSKDKGSNNKGDQPFDKSKMQCRRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETE 2506
+S+ +G N + +DKS ++C ++GH+ C+ + E+SN+ E+ + E
Sbjct: 267 GENSSRGRGRGNPKSR-YDKSSIKCYSCGKFGHYASECKTPNKNRVEEKSNYVEERSKEE 325
Query: 2505 ISLLMACHHQEEIDHRNDMCYLDTGSSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKG 2326
LLMA ++++ + YLD+G+SNHMCG+KS F +LDE+ + V GD S + VKG
Sbjct: 326 DMLLMA--YKKDEPNEVHKWYLDSGASNHMCGNKSMFVELDESVKTDVALGDESRMEVKG 383
Query: 2325 I*DIKFQAKNNTQQVISNVFYVPGLKSNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLIT 2146
+I + KN Q ISNV+Y+P +K+N+LS+GQLLEKGY++ LK+ + D LIT
Sbjct: 384 KGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNSLSLRDNANNLIT 443
Query: 2145 QVQMTRNRMFPLFLRNDVLPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQI 1966
+V M+ NRMF L ++ND+ C SWLWHLR+GHLNF GL +L +++MVKGLP I
Sbjct: 444 KVPMSSNRMFVLNIQNDIARCLKMCYKEESWLWHLRFGHLNFGGLELLSKKEMVKGLPCI 503
Query: 1965 DLQEQLCEGCVVGKQNRDSFPKESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDD 1786
+ Q+CEGC++GKQ + SFPKES+ RA+K LEL+HTD+CGPI P S G YF+ FIDD
Sbjct: 504 NHPNQVCEGCLLGKQFKMSFPKESETRARKPLELIHTDVCGPIKPSSLGKSNYFLLFIDD 563
Query: 1785 FSRKTWVYFLNAKSEAFSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGI 1606
FSRKTWVYFL KSE F FK+FK VEK++G IK++RSDRGGE+ S EF +C+ +GI
Sbjct: 564 FSRKTWVYFLKQKSEVFENFKKFKAHVEKESGLKIKSMRSDRGGEFMSKEFLKYCEDNGI 623
Query: 1605 KRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSV 1426
+RQ T TPQQNGVAERKNRTIL M RS+L + +PK+ W E V VY+ NRSPT+SV
Sbjct: 624 RRQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKELWAEAVACAVYISNRSPTKSV 683
Query: 1425 INMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFF 1246
+ TP EAWSG KP VSHLRVFG IA+AHV DEKR KLDDK K IF+GY SK YK +
Sbjct: 684 LEKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLY 743
Query: 1245 DPITKKIDQSR 1213
+P TKK SR
Sbjct: 744 NPETKKTIISR 754
Score = 330 bits (846), Expect(3) = 0.0
Identities = 171/381 (44%), Positives = 243/381 (63%), Gaps = 2/381 (0%)
Frame = -1
Query: 1235 QKKLISRDIVFDETRFWNWKTNDVD-EFIP-VEDDFVGSTSPEIHTPVISPPSSPEPQHI 1062
+K +ISR+++FDE W+W++N+ D F P E++ V E TP SP +S +
Sbjct: 748 KKTIISRNVIFDEEGEWDWRSNNEDYNFFPSFEEENVEQPREEPATPPTSPTTSSQGDE- 806
Query: 1061 ATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIHL 882
S RT S + Y++ + D+ +
Sbjct: 807 ------------------------------SSSERTPRFRSLQDIYEVTENQDNLTLF-- 834
Query: 881 ALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYN 702
LFA +P++F++ + W AMD EIK+I K +TWELA LP GHK IGVKWVYK K N
Sbjct: 835 CLFADCEPMNFEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYKAKKN 894
Query: 701 SDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSA 522
S G V++ KAR+V KGY+Q +DYDEVF+PVAR +T++L+I+LAAQ SW + Q+DVKSA
Sbjct: 895 SKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSA 954
Query: 521 FLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGFQKS 342
FLNGDL+E VY++QP GY+ KG E KV RL+KALYGLKQAPRAW +RI+ YF + GF K
Sbjct: 955 FLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKGFIKC 1014
Query: 341 PHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLG 162
P+E L+++ + + + L+ CLYVDDLI+T N+ +++E+FK M EFEM+D+G++ Y+LG
Sbjct: 1015 PYEHALYIKTQ-NNDILIACLYVDDLIFTGNNPIMFEDFKMEMTKEFEMTDIGLMSYYLG 1073
Query: 161 LEVVQSSGGTFLS*KKYVSEI 99
+EV Q G F++ + Y E+
Sbjct: 1074 IEVKQEENGIFITQEGYAKEV 1094
Score = 34.3 bits (77), Expect(3) = 0.0
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -2
Query: 97 LCKFQMDTCNFVRSPAEVGMKLEKDPQGKKVD 2
L KF+MD N V +P E G+KL K+ +G+ VD
Sbjct: 1095 LKKFKMDDSNPVCTPMECGVKLSKEEEGESVD 1126
Score = 565 bits (1456), Expect(3) = 0.0
Identities = 293/610 (48%), Positives = 398/610 (65%), Gaps = 24/610 (3%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R +++ N ++ +GE +DDV I+EKVLRS+ SKF+++V IEE+ D++T++++QL SL
Sbjct: 1486 RVLTVTNNLKRNGEKLDDVRIMEKVLRSLDSKFEHIVTVIEETKDLETMTMEQLLGSLQA 1545
Query: 2790 HEQRINQHE-TVEQALQLQ-----------------HXXXXXXXXXXXXXXKHCD----- 2680
+E++ + E VEQ L+++ H + D
Sbjct: 1546 YEEKKKKKEDIVEQVLKMRIDHKEESGRNHPRRGGGHFRGRGRGVNGRGWRPYEDNFNQR 1605
Query: 2679 -ENSKDKGSNNKGDQPFDKSKMQCRRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETEI 2503
ENS +DKS ++C ++GH+ C+ + + E+SN+ E+ + E
Sbjct: 1606 GENSSRGRGRGNPKSRYDKSSIKCYSCGKFGHYASECKTPNNNRVEEKSNYVEERRKEED 1665
Query: 2502 SLLMACHHQEEIDHRNDMCYLDTGSSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI 2323
LLMA ++++ + YLD+G+SNHMCG+KS F +LDE+ + V GD S + VKG
Sbjct: 1666 MLLMA--YKKDEPNEVHKWYLDSGASNHMCGNKSMFVELDESVKTDVALGDESRMEVKGK 1723
Query: 2322 *DIKFQAKNNTQQVISNVFYVPGLKSNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQ 2143
+I + KN Q ISNV+Y+P +K+N+LS+GQLLEKGY++ LK+ + D LIT+
Sbjct: 1724 GNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNSLSLRDNANNLITK 1783
Query: 2142 VQMTRNRMFPLFLRNDVLPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQID 1963
V M+ NRMF L ++ND+ C SWLWHLR+GHLNF GL +L +++MVKGLP I+
Sbjct: 1784 VPMSSNRMFVLNIQNDIARCLKMCYKEESWLWHLRFGHLNFGGLELLSKKEMVKGLPCIN 1843
Query: 1962 LQEQLCEGCVVGKQNRDSFPKESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDF 1783
Q+CEGC++GKQ + SFPKES+ RA+K LEL+HTD+CGPI P S G YF+ FIDDF
Sbjct: 1844 HPNQVCEGCLLGKQFKMSFPKESETRARKPLELIHTDVCGPIKPSSLGKSNYFLLFIDDF 1903
Query: 1782 SRKTWVYFLNAKSEAFSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIK 1603
SRKTWVYFL KSE F FK+FK VEK++G IK++RSDRGGE+ S EF +C+ +GI+
Sbjct: 1904 SRKTWVYFLKQKSEVFENFKKFKAHVEKESGLKIKSMRSDRGGEFMSKEFLKYCEDNGIR 1963
Query: 1602 RQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVI 1423
RQ T TPQQNGVAERKNRTIL M RS+L + +PK+ W E V VY+ NRSPT+SV+
Sbjct: 1964 RQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKELWAEAVACAVYISNRSPTKSVL 2023
Query: 1422 NMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFD 1243
TP EAWSG KP VSHLRVFG IA+AHV DEKR KLDDK K IF+GY SK YK ++
Sbjct: 2024 EKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYN 2083
Query: 1242 PITKKIDQSR 1213
P TKK SR
Sbjct: 2084 PETKKTIISR 2093
Score = 328 bits (842), Expect(3) = 0.0
Identities = 170/381 (44%), Positives = 243/381 (63%), Gaps = 2/381 (0%)
Frame = -1
Query: 1235 QKKLISRDIVFDETRFWNWKTNDVD-EFIP-VEDDFVGSTSPEIHTPVISPPSSPEPQHI 1062
+K +ISR+++FDE W+W++N+ D F P E++ V E TP SP +S +
Sbjct: 2087 KKTIISRNVIFDEEGEWDWRSNNEDYNFFPSFEEENVEQPREEPATPPTSPTTSSQGDE- 2145
Query: 1061 ATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIHL 882
S RT S + Y++ + D+ +
Sbjct: 2146 ------------------------------SSSERTPRFRSLQDIYEVTENQDNLTLF-- 2173
Query: 881 ALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYN 702
LFA +P++F++ + W AMD EIK+I K +TWELA LP GHK IGVKWVYK K N
Sbjct: 2174 CLFADCEPMNFEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYKAKKN 2233
Query: 701 SDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSA 522
S G V++ KAR+V KGY+Q +DYDEVF+PVAR +T++L+I+LAAQ SW + Q+DVKSA
Sbjct: 2234 SKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSA 2293
Query: 521 FLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGFQKS 342
FLNGDL+E VY++QP GY+ +G E KV RL+KALYGLKQAPRAW +RI+ YF + GF K
Sbjct: 2294 FLNGDLEEEVYIEQPQGYIVEGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKGFIKC 2353
Query: 341 PHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLG 162
P+E L+++ + + + L+ CLYVDDLI+T N+ +++E+FK M EFEM+D+G++ Y+LG
Sbjct: 2354 PYEHALYIKTQ-NNDILIACLYVDDLIFTGNNPIMFEDFKMEMTKEFEMTDIGLMSYYLG 2412
Query: 161 LEVVQSSGGTFLS*KKYVSEI 99
+EV Q G F++ + Y E+
Sbjct: 2413 IEVKQEENGIFITQEGYAKEV 2433
Score = 34.3 bits (77), Expect(3) = 0.0
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -2
Query: 97 LCKFQMDTCNFVRSPAEVGMKLEKDPQGKKVD 2
L KF+MD N V +P E G+KL K+ +G+ VD
Sbjct: 2434 LKKFKMDDSNPVCTPMECGVKLSKEEEGESVD 2465
>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
Length = 1339
Score = 551 bits (1419), Expect(2) = 0.0
Identities = 276/586 (47%), Positives = 395/586 (67%), Gaps = 4/586 (0%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R +++ NKM+++GE M+ I+ K+LRS+T KF+YVV SIEES+D+ TLSID+L SL++
Sbjct: 139 RTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEESNDLSTLSIDELHGSLLV 198
Query: 2790 HEQRINQHETVEQALQLQHXXXXXXXXXXXXXXKHCDENSKDKGSNNKGDQPFDKSKMQC 2611
HEQR+N H EQAL++ H S+ +G +G +++ ++C
Sbjct: 199 HEQRLNGHVQEEQALKVTHEERPSQGRGRGVF-----RGSRGRG-RGRGRSGTNRAIVEC 252
Query: 2610 RRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETEISLLMACHHQEEIDHRNDMCYLDTG 2431
+ GHF+ C + + +N+AE ++E E+ LLMA Q + + R+++ +LD+G
Sbjct: 253 YKCHNLGHFQYEC-----PEWEKNANYAELEEEEEL-LLMAYVEQNQAN-RDEVWFLDSG 305
Query: 2430 SSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGL 2251
SNHM G K +FS+L+E F TVK G+++ ++V G +K + N QVI V+YVP L
Sbjct: 306 CSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKV-NGVTQVIPEVYYVPEL 364
Query: 2250 KSNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFL----RNDVLPC 2083
++NLLS+GQL E+G + +++G C++ P +G I + M+ NRMF L +N +
Sbjct: 365 RNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASKPQKNSLCLQ 424
Query: 2082 FSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFP 1903
+++ + LWH R+GHLN +GL +L + MV GLP + +++C C+ GKQ+R+S
Sbjct: 425 TEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICAICLTGKQHRESMS 484
Query: 1902 KESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFLNAKSEAFSVFK 1723
K++ W++ L+LVH+DICGPITP+S+ KRY ++FIDDF+RKTWVYFL+ KSEAF+ FK
Sbjct: 485 KKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEKSEAFATFK 544
Query: 1722 EFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNR 1543
FK VEK+ G + LR+DRGGE+ SNEF +FC+ GI RQ TAAFTPQQNGVAERKNR
Sbjct: 545 IFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNR 604
Query: 1542 TILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRV 1363
TI+N VRS+L VPK FW E +W+V++ NRSPT +V MTP EAWSG KP V + RV
Sbjct: 605 TIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRV 664
Query: 1362 FGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPITKKI 1225
FGCI Y H+ D+KR KLDDK KC+FLG S+ SKA++ +DP+ KKI
Sbjct: 665 FGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKI 710
Score = 354 bits (908), Expect(2) = 0.0
Identities = 185/383 (48%), Positives = 254/383 (66%), Gaps = 4/383 (1%)
Frame = -1
Query: 1235 QKKLISRDIVFDETRFWNWKTNDVD-EFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHIA 1059
+K +IS+D+VFDE + W+W DV+ + + +E G E ++ V+ P + P H+
Sbjct: 708 KKIVISKDVVFDEDKSWDWDQADVEAKEVTLE---CGDEDDEKNSEVVEPIAVASPNHVG 764
Query: 1058 TPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQL---QVSGDDSSQI 888
+ N + + +R RR P WM DY+ + ++ S +
Sbjct: 765 SDNNVSSS----PILAPSSPAPSPVAAKVTRERRP---PGWMADYETGEGEEIEENLSVM 817
Query: 887 HLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTK 708
L + +DP+ F D V+D W AM+ EI++I K NTWEL LP G PIGVKWVYKTK
Sbjct: 818 LLMMMTEADPIQFDDAVKDKIWREAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTK 877
Query: 707 YNSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVK 528
N DG VDK KAR+V KGYAQ +DY EVF+PVAR DT++ ++A+++Q +W +FQLDVK
Sbjct: 878 LNEDGEVDKYKARLVAKGYAQCYGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVK 937
Query: 527 SAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGFQ 348
SAFL+G+L+E VYV QP G++R+G E+KVY+LRKALYGLKQAPRAWYSRIEAYF+K F+
Sbjct: 938 SAFLHGELKEEVYVRQPEGFIREGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFE 997
Query: 347 KSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYF 168
+ P E TLF + + GN L+V LYVDDLI+T +D+ + +EFK SMM EFEMSDLG + +F
Sbjct: 998 RCPSEHTLFTKTRV-GNILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHF 1056
Query: 167 LGLEVVQSSGGTFLS*KKYVSEI 99
LG+EV QS GG F+ ++Y E+
Sbjct: 1057 LGIEVKQSDGGIFICQRRYAREV 1079
>gb|KOM33859.1| hypothetical protein LR48_Vigan02g000900 [Vigna angularis]
Length = 1349
Score = 551 bits (1420), Expect(2) = 0.0
Identities = 286/593 (48%), Positives = 388/593 (65%), Gaps = 7/593 (1%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R + I KM+S+GE M + I+ K+LRS+T KF+YVV SIEES+D+D L+ID+L SL++
Sbjct: 137 RLLHIVTKMKSNGEEMKENTIVSKILRSLTLKFNYVVCSIEESNDLDVLTIDELHGSLLV 196
Query: 2790 HEQRINQHETVEQALQLQHXXXXXXXXXXXXXXKHCDENSKDKGSNNKGDQPFDKSKMQC 2611
HEQR+ + E L++ H +++ +G Q +KS ++C
Sbjct: 197 HEQRMQDFQIEEHVLKVTHTNDNGSSRGRGGRGAFRG-GGRNRTGRGRGRQSLNKSLIEC 255
Query: 2610 RRYKRYGHFEVNCRVNLSKKNGER-SNFAEKDDETEISLLMACHHQEEIDH--RNDMCYL 2440
+ + GHF+ C + ER +++AE D+E E LL+A EE+ H D+ +L
Sbjct: 256 FKCHKLGHFQYEC------PDWERQAHYAELDEEDEELLLVA---YEELHHTTHEDVWFL 306
Query: 2439 DTGSSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYV 2260
D+G SNHM G K +FSD +E TVK G+N+T+ V G I+ + TQ VIS+V+ V
Sbjct: 307 DSGCSNHMTGSKEWFSDFEEGLCKTVKLGNNTTMKVVGKGCIRVKIHGFTQ-VISDVYLV 365
Query: 2259 PGLKSNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFL----RNDV 2092
P LK+NLLS+GQL EKG + ++ G C+I P++GLI +M NRMF + + +
Sbjct: 366 PELKNNLLSLGQLQEKGLSILIQQGSCKIFHPEKGLIIHSKMKSNRMFYVTACATPKESM 425
Query: 2091 LPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRD 1912
+S + + LWH R+ HL++ GL L ++MV GLP + Q ++CE C++GKQ R+
Sbjct: 426 CMQTNSSFDQETHLWHCRFCHLSYGGLNTLASKEMVTGLPPLKFQNRICETCLIGKQKRE 485
Query: 1911 SFPKESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFLNAKSEAFS 1732
PK+ WRA K L+L+H DICGPITP SN NKRY +TFIDDFSRKTW+YFL KSEA +
Sbjct: 486 PKPKKCLWRASKQLQLIHADICGPITPSSNSNKRYILTFIDDFSRKTWIYFLQEKSEALT 545
Query: 1731 VFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAER 1552
+FK FK VEK+A I LR+DRGGE+ S EF +FCK GI RQ TAA+TPQQNGVAER
Sbjct: 546 MFKRFKASVEKEADMCITCLRTDRGGEFTSMEFEEFCKTQGISRQLTAAYTPQQNGVAER 605
Query: 1551 KNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSH 1372
KN+TI+N VR+ L VPK FWPE +W V+V NRSPT +V TP E W G+KPRV +
Sbjct: 606 KNKTIMNAVRATLNGKQVPKAFWPEAARWCVHVQNRSPTSAVEQKTPEEVWCGKKPRVDY 665
Query: 1371 LRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPITKKIDQSR 1213
RVFGC+A+AH+ ++KR KLDDK +C+FLG SD SKAYK FDP+TKK+ SR
Sbjct: 666 FRVFGCVAHAHIPNQKRSKLDDKSKRCVFLGVSDESKAYKLFDPLTKKVIISR 718
Score = 340 bits (872), Expect(2) = 0.0
Identities = 184/389 (47%), Positives = 242/389 (62%), Gaps = 10/389 (2%)
Frame = -1
Query: 1235 QKKLISRDIVFDETRFWNWK------TNDV----DEFIPVEDDFVGSTSPEIHTPVISPP 1086
+K +ISRD++F+E + W+W+ + DV ++ + S E + +
Sbjct: 712 KKVIISRDVIFEEDKSWDWEGPKETSSTDVLDWDEQMFEARKEDSRSAQQEGNGSITIAV 771
Query: 1085 SSPEPQHIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSG 906
SS +P + + R R P WM DY
Sbjct: 772 SSSDPNDNSNETI----------LPLGEDVDERATQVQGRATRQRREPVWMADYTHFSEE 821
Query: 905 DDSSQIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVK 726
D + LA G DP S+K+ Q KW AM+AEI+AI+K TWEL D P G PIGVK
Sbjct: 822 ADLMALMLAEHGG-DPHSYKEASQSIKWREAMNAEIQAIEKNKTWELTDAPTGITPIGVK 880
Query: 725 WVYKTKYNSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPV 546
WV+KTK N G ++K KAR+V KGY+Q+ VDY EVF+PVAR DT+++L+A+AAQ+ W V
Sbjct: 881 WVFKTKLNEHGNIEKHKARLVAKGYSQQYGVDYTEVFAPVARLDTVRVLLAIAAQHKWEV 940
Query: 545 FQLDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYF 366
FQLDVKSAFL+G+L+E VY+ QP G+V++G E KVYRLRKALYGLKQAPRAWYSRIEAYF
Sbjct: 941 FQLDVKSAFLHGELKEEVYIQQPEGFVKEGKEDKVYRLRKALYGLKQAPRAWYSRIEAYF 1000
Query: 365 IKMGFQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDL 186
+K F+K P E TLF + D N L+V LYVDDLIYT +DR + E+FK SMM EF+M+DL
Sbjct: 1001 VKEQFEKCPSEHTLFTKKSGD-NILIVSLYVDDLIYTGSDRSMCEQFKGSMMLEFDMTDL 1059
Query: 185 GMLHYFLGLEVVQSSGGTFLS*KKYVSEI 99
G + YFLG+EV+QS G F+ ++Y I
Sbjct: 1060 GRMRYFLGIEVIQSKAGLFICQRRYAQTI 1088
>gb|AIC77183.1| polyprotein [Gossypium barbadense]
Length = 1369
Score = 546 bits (1408), Expect(3) = 0.0
Identities = 286/629 (45%), Positives = 390/629 (62%), Gaps = 43/629 (6%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R S+ N+M+ +GE +D+V ++EK+LRS+T KF+YVV +IEES D+ +S+++L SL
Sbjct: 139 RVKSVVNEMKRNGETLDEVRVMEKILRSLTRKFEYVVVAIEESKDLSKMSLEELVGSLQA 198
Query: 2790 HEQRINQHETVEQALQLQHXXXXXXXXXXXXXXKHCDENSKD------------KGSNNK 2647
HEQ++ +E E Q H N + +GS +
Sbjct: 199 HEQKMKLNEDSENLNQALHSKLSIDDGETSNNFSQGRGNRRGYRGGYRGGNRGGRGSRGR 258
Query: 2646 GDQPF----------------------------DKSKMQCRRYKRYGHFEVNCRVNLSKK 2551
G+Q + +KS++QC +YGHF CR + K
Sbjct: 259 GNQSYGRYQENKDYQTSNRGRGSRGRGRGRFQENKSQVQCYNCNKYGHFSYECRS--THK 316
Query: 2550 NGERSNFA---EKDDETEISLLMACHHQEEIDHRNDMCYLDTGSSNHMCGDKSFFSDLDE 2380
ER++ A E +++ E S+ + + E D + + YLD G+SNHMCG K F++LDE
Sbjct: 317 VDERNHVAVAAEGNEKVESSVFLT--YGENEDRKRSVWYLDNGASNHMCGRKELFTELDE 374
Query: 2379 TFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLKSNLLSVGQLLEKGYEL 2200
T + FGDNS +KG + +N ++ IS+V+YVP LKSNL+S+GQLLEKGYE+
Sbjct: 375 TVHGQITFGDNSHAEIKGKGKVVITQRNGEKKYISDVYYVPALKSNLISLGQLLEKGYEV 434
Query: 2199 TLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIVNNPSWLWHLRYGHLNF 2020
+K+ I + L+ +V MTRNR+F L + + + C + + N SWLWHLRYGHL F
Sbjct: 435 HMKDRSLAIRNKSGELVVRVDMTRNRLFTLDIESGEVKCMKTDLKNESWLWHLRYGHLGF 494
Query: 2019 KGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKWRAKKVLELVHTDICGP 1840
GL +L + +MV GLP I+ +QLCE CV GKQ+R F RA++ LE+VHTDI GP
Sbjct: 495 SGLKLLSKTNMVNGLPSINHPDQLCEACVKGKQHRQKFEVGKSRRARRPLEIVHTDISGP 554
Query: 1839 ITPLSNGNKRYFITFIDDFSRKTWVYFLNAKSEAFSVFKEFKVLVEKDAGCLIKTLRSDR 1660
S G RY++TFIDD+SRK WVYFL AKSEA FKEFK +VEK +G +K LRSDR
Sbjct: 555 YDIESLGGNRYYLTFIDDYSRKCWVYFLKAKSEALEKFKEFKAMVEKQSGRYLKILRSDR 614
Query: 1659 GGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWP 1480
GGEY + + FCK GI Q TA TPQQNGVAERKNRTIL+M RS++ +P+ FW
Sbjct: 615 GGEYTAKLYESFCKDHGIIHQLTARRTPQQNGVAERKNRTILDMARSMIKGKHLPRTFWA 674
Query: 1479 EVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKG 1300
E V+ VY+LN+ PT+SV + TP EAWSG KPRV HL++FGCIAYAHV +++RKKLDD+G
Sbjct: 675 EAVECAVYLLNQCPTKSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQRKKLDDRG 734
Query: 1299 VKCIFLGYSDVSKAYKFFDPITKKIDQSR 1213
KCIF+GY SKAY+ ++P+TKK+ SR
Sbjct: 735 EKCIFIGYDKRSKAYRLYNPLTKKLIISR 763
Score = 331 bits (849), Expect(3) = 0.0
Identities = 175/381 (45%), Positives = 234/381 (61%), Gaps = 2/381 (0%)
Frame = -1
Query: 1235 QKKLISRDIVFDETRFWNWKTND--VDEFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHI 1062
+K +ISRD+ FDE +W W + V+ EDD + +P + PSSP
Sbjct: 757 KKLIISRDVEFDEADYWRWSEEEKKVEGLFFNEDDNNQEEQGDDQSPGTTAPSSPT---- 812
Query: 1061 ATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIHL 882
+ G ++ P T DY L
Sbjct: 813 ------SSSGSSSLDEAPTRTRSLNDIYNSTEPVET------QFDYSL-----------F 849
Query: 881 ALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYN 702
L DPV++++ +++ KW AMD EI AI + +TWEL LP GH PIGVKWVYKTK N
Sbjct: 850 CLMTECDPVTYEEAIENNKWKKAMDEEIAAIRRNDTWELTSLPEGHSPIGVKWVYKTKTN 909
Query: 701 SDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSA 522
+G V+K KAR+V KGY Q + VDYDE+F+PVAR DTI+LLIA+AAQ W ++Q+DVKSA
Sbjct: 910 KEGKVEKYKARLVAKGYKQRQGVDYDEIFAPVARIDTIRLLIAVAAQYKWKIYQMDVKSA 969
Query: 521 FLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGFQKS 342
FLNG L+E VY++QPPGY +G E KVYRL+K+LYGLKQAPRAW +RI+ YF + GF KS
Sbjct: 970 FLNGYLEEEVYIEQPPGYSIQGKEDKVYRLKKSLYGLKQAPRAWNTRIDEYFRRNGFIKS 1029
Query: 341 PHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLG 162
PHE TL+ + G+ ++VCLYVDD+I+T N+ + ++FK +M EFEM+D+G + YFLG
Sbjct: 1030 PHEHTLYTKKNGYGDIMIVCLYVDDMIFTGNNPGMSDDFKKAMTKEFEMTDIGEMSYFLG 1089
Query: 161 LEVVQSSGGTFLS*KKYVSEI 99
+EV Q G F+S KKY +I
Sbjct: 1090 VEVKQMQDGIFVSQKKYAEQI 1110
Score = 27.3 bits (59), Expect(3) = 0.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 97 LCKFQMDTCNFVRSPAEVGMKLEKDPQGKKVD 2
L KF+M C V +PA+ GMKL D + ++
Sbjct: 1111 LNKFKMKDCKPVVTPADPGMKLSVDSTRESIN 1142
>emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]
Length = 1041
Score = 461 bits (1186), Expect(3) = 0.0
Identities = 234/405 (57%), Positives = 290/405 (71%), Gaps = 12/405 (2%)
Frame = -3
Query: 2391 DLDETFISTVKFGDNSTIAVKGI*DIKFQAKN---NTQQVIS---------NVFYVPGLK 2248
+++ET I+ + +N+ I +K + + K + ++ TQQ+I NV V LK
Sbjct: 115 EVEETEITMIVGTNNNIIVIKRV-NFKEETEDVEATTQQLIDQSQKTSPMLNVTDVIDLK 173
Query: 2247 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2068
+NLLSVGQL EK YE+ +K+GV +I+D K G+I QV MT NR FPL+L N + CF + +
Sbjct: 174 TNLLSVGQLQEKIYEIFIKDGVFQIQDAKLGIIAQVNMTVNRTFPLYLHNTIHLCFLAKL 233
Query: 2067 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 1888
+WLWH RYGHLNF GL L Q++MV GLPQI Q CE CVV KQ+ + FP+ W
Sbjct: 234 KYEAWLWHFRYGHLNFGGLKTLQQKNMVTGLPQIIASSQFCEECVVSKQHCNQFPQVKSW 293
Query: 1887 RAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFLNAKSEAFSVFKEFKVL 1708
RAKK LELVH+DICGPI P SNG+KRY ITFIDD+SRK WVYFL KSEAF FK +K L
Sbjct: 294 RAKKALELVHSDICGPIIPNSNGSKRYIITFIDDYSRKIWVYFLQEKSEAFVAFKSYKAL 353
Query: 1707 VEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNM 1528
VEK+ G IK R DRGGEY S+EFA+FC+ GI+RQ TA + PQQNGV ERKN TI+NM
Sbjct: 354 VEKEVGNPIKFFRMDRGGEYNSHEFANFCENHGIRRQLTATYIPQQNGVCERKNSTIMNM 413
Query: 1527 VRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIA 1348
VRS+L TSG+PK FW E V W++++LNRSPT V NMTP EAWSG K V+H R+FGCIA
Sbjct: 414 VRSLLTTSGIPKSFWLEAVNWSIHILNRSPTLVVQNMTPKEAWSGRKLVVNHFRIFGCIA 473
Query: 1347 YAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPITKKIDQSR 1213
YA++ DEKR+KLD+KG KCIFLG SD KAYK ++P T KI SR
Sbjct: 474 YAYIPDEKRRKLDNKGEKCIFLGVSDKLKAYKLYNPSTMKIVLSR 518
Score = 354 bits (909), Expect(3) = 0.0
Identities = 190/381 (49%), Positives = 242/381 (63%), Gaps = 3/381 (0%)
Frame = -1
Query: 1232 KKLISRDIVFDETRFWNWKTNDVDEFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHIATP 1053
K ++SRD+VFDE W+WK N V E IPV+ D P E + T
Sbjct: 513 KIVLSRDVVFDEKDTWSWKQNGVKENIPVDFD---------DDEKWQQPMENEQEEEVTQ 563
Query: 1052 NAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQ---IHL 882
N P + + RP+R RP+WM +++ V+G D + +
Sbjct: 564 NVPIVD-------------QSPLATESQRPQRVRKRPAWMTNHE--VTGVDQGEDPLTYF 608
Query: 881 ALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYN 702
A+F+ D + F+ V++PKW AMDAEI AI++ +TWEL DLP G K IGVKWVYKTK
Sbjct: 609 AMFSDCDLIIFETAVKEPKWRKAMDAEIAAIERNDTWELCDLPKGQKTIGVKWVYKTKLK 668
Query: 701 SDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSA 522
+G VDK KA +V KGY QE VDY EVF+ +ARHDTIKLL DVK A
Sbjct: 669 ENGEVDKHKACLVAKGYKQEFGVDYKEVFASIARHDTIKLL--------------DVKLA 714
Query: 521 FLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGFQKS 342
FL+GDL+E V++DQP GY + G+E KVY+L+KALYGLKQ PRAWY+RIE YF+K GFQK
Sbjct: 715 FLHGDLKEEVFIDQPLGYAKLGNEHKVYKLKKALYGLKQTPRAWYNRIETYFLKEGFQKC 774
Query: 341 PHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLG 162
P+E TLF++ + G +VCLYVDDLIYT N+ ++E FK SMMAEFEMSDLGM+HYFLG
Sbjct: 775 PYEHTLFIKIEDGGKMHIVCLYVDDLIYTGNNTAMFESFKKSMMAEFEMSDLGMMHYFLG 834
Query: 161 LEVVQSSGGTFLS*KKYVSEI 99
+E++Q S G +S KKYV EI
Sbjct: 835 IEMMQYSTGILISQKKYVGEI 855
Score = 42.4 bits (98), Expect(3) = 0.0
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -2
Query: 97 LCKFQMDTCNFVRSPAEVGMKLEKDPQGKKVD 2
L +FQM CN V +P+E GMKL KD GKKVD
Sbjct: 856 LDRFQMKDCNPVNTPSEFGMKLNKDNGGKKVD 887
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 504 bits (1299), Expect(2) = 0.0
Identities = 276/599 (46%), Positives = 372/599 (62%), Gaps = 10/599 (1%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R +I N+MRS+GE +D+ +++ KVLRS+T+KF++VV +IEES D+ T S D+L SSL+
Sbjct: 132 RTSAIVNRMRSYGEKIDNQIVVSKVLRSLTTKFEHVVTAIEESKDLSTYSFDELMSSLLA 191
Query: 2790 HEQRINQ--HETVEQALQLQHXXXXXXXXXXXXXXKHCDENSKDKGS-------NNKGDQ 2638
HE R+N+ + E+A Q++ H N + +G N G+
Sbjct: 192 HEDRLNRSREKVQEKAFQVKGEFSYKGKAENSAGRGHGRGNFRGRGRGGSGRGRNQVGEF 251
Query: 2637 PFDKSKMQCRRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETEISLLMACHHQEEIDHR 2458
KS +QCR K++GH EV+C K + +NF + +E E L MA E
Sbjct: 252 RQYKSNIQCRYCKKFGHKEVDCWTK-QKDEQKDANFTQNVEE-ESKLFMASSQITE--SA 307
Query: 2457 NDMCYLDTGSSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVI 2278
N + ++D+G SNHM KS F DLDE+ S V+ GD+ + ++G ++ + + +
Sbjct: 308 NAVWFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKTVQGNVKFL 367
Query: 2277 SNVFYVPGLKSNLLSVGQLLEKGYELTLKNGVCRIEDPKRG-LITQVQMTRNRMFPLFLR 2101
+V YVP L NLLSVGQL+ GY + + C I+D + G I +V MT+N+MFPL +
Sbjct: 368 YDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDIS 427
Query: 2100 NDVLPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQ 1921
N N + LWHLRYGHLN L +L Q+DMV GLP I + LCEGC+ GKQ
Sbjct: 428 NVGNSALVVKEKNETNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIK-ELDLCEGCIYGKQ 486
Query: 1920 NRDSFPKESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFLNAKSE 1741
R SFP WRA LELVH D+CGP+ S G RYF+ F DD+SR +WVYFL KSE
Sbjct: 487 TRKSFPVGKSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFLKFKSE 546
Query: 1740 AFSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGV 1561
F FK+FK VE +G IK+LR+DRGGE+ SN+F FC+++GI+R+ TA +TP+QNGV
Sbjct: 547 TFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGV 606
Query: 1560 AERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPR 1381
AERKNRT++ M RS L G+P FW E V VY LN SPT+ V N TP+EAW+G+KPR
Sbjct: 607 AERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVWNTTPLEAWNGKKPR 666
Query: 1380 VSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPITKKIDQSRYCV 1204
VSHLR+FGCIAYA V KLD+K KCIF+GYS SKAY+ ++PI+ K+ SR V
Sbjct: 667 VSHLRIFGCIAYALV--NFHSKLDEKSTKCIFVGYSLQSKAYRLYNPISGKVIISRNVV 723
Score = 321 bits (822), Expect(2) = 0.0
Identities = 171/381 (44%), Positives = 246/381 (64%), Gaps = 3/381 (0%)
Frame = -1
Query: 1232 KKLISRDIVFDETRFWNWKTNDVD---EFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHI 1062
K +ISR++VF+E WN+ + ++ + +P +++ SP SSP +
Sbjct: 715 KVIISRNVVFNEDVSWNFNSGNMMSNIQLLPTDEESAVDFGN-------SPNSSPVSSSV 767
Query: 1061 ATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIHL 882
++P AP+ SV RR+ Y V+ S Q L
Sbjct: 768 SSPIAPSTT-----------VAPDESSVEPIPLRRSTREKKPNPKYSNTVN--TSCQFAL 814
Query: 881 ALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYN 702
+ SDP+ +++ V+ +W AM EI+AI++ +TWEL D P G IG+KWV++TKYN
Sbjct: 815 LV---SDPICYEEAVEQSEWKNAMIEEIQAIERNSTWELVDAPEGKNVIGLKWVFRTKYN 871
Query: 701 SDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSA 522
+DG + K KAR+V KGY+Q++ VD+DE FSPVAR +T+++++ALAAQ PV+Q DVKSA
Sbjct: 872 ADGSIQKHKARLVAKGYSQQQGVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSA 931
Query: 521 FLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGFQKS 342
FLNGDL+E VYV QP G++ G+E KVY+LRKALYGLKQAPRAWYS+I+++F GF++S
Sbjct: 932 FLNGDLEEEVYVSQPQGFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRS 991
Query: 341 PHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLG 162
+EPTL+++ + FL+VCLYVDD+IY + + L +FK++MM FEMSDLG+L YFLG
Sbjct: 992 DNEPTLYLKKQGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLG 1051
Query: 161 LEVVQSSGGTFLS*KKYVSEI 99
LEV+Q G F+S KKY ++
Sbjct: 1052 LEVIQDKDGIFISQKKYAEDL 1072
>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
thaliana]
Length = 1334
Score = 508 bits (1307), Expect(2) = 0.0
Identities = 260/595 (43%), Positives = 377/595 (63%), Gaps = 9/595 (1%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R M I N MR+ GE+M D ++EK+LR++ KF YVV +IEES+++ L++D L SSLM+
Sbjct: 135 RVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIKELTVDGLQSSLMV 194
Query: 2790 HEQRINQHETVEQALQLQHXXXXXXXXXXXXXXKHCDENSKDKGSNNKGDQPFDKSKMQC 2611
HEQ +++H+ E+ L+ + G +G ++ ++C
Sbjct: 195 HEQNLSRHDVEERVLKAETQWRPDGGRGRGGSP---SRGRGRGGYQGRGRGYVNRDTVEC 251
Query: 2610 RRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETEISLLMACHHQEEIDHRNDMCYLDTG 2431
+ + GH++ C + +N+ E +++ LL+ H ++ D + +LD+G
Sbjct: 252 FKCHKMGHYKAEC-----PSWEKEANYVEMEED----LLLMAHVEQIGDEEKQIWFLDSG 302
Query: 2430 SSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGL 2251
SNHMCG + +F +LD F V+ GD+ +AV+G ++ + Q VIS+V++VPGL
Sbjct: 303 CSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQ-VISDVYFVPGL 361
Query: 2250 KSNLLSVGQLLEKGYELTLKNGVCRI-EDPKRGLITQVQMTRNRMFPLFL------RNDV 2092
K+NL SVGQL +KG ++ VC + ++ ++ MT+NRMF +F +
Sbjct: 362 KNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEE 421
Query: 2091 LPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDL--QEQLCEGCVVGKQN 1918
C ++ + +WH R+GHLN +GL L +++MVKGLP+ DL +E +C+ C+ GKQ
Sbjct: 422 TRCLQ-VIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQI 480
Query: 1917 RDSFPKESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFLNAKSEA 1738
R+S PKES W++ +VL+LVHTDICGPI P S KRY + FIDDFSRK W Y L+ KSE
Sbjct: 481 RESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSET 540
Query: 1737 FSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVA 1558
F FKEFK VE+++G + LRSDRGGEY S EF ++CK+ GIKRQ TAA+TPQQNGVA
Sbjct: 541 FQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVA 600
Query: 1557 ERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRV 1378
ERKNR+++NM R +L VP+KFWPE VQ+ VY+LNRSP++++ ++TP E WS KP V
Sbjct: 601 ERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSV 660
Query: 1377 SHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPITKKIDQSR 1213
HLR+FG +AYA V +KR KLD+K +KC+ G S SKAY+ +DP T KI SR
Sbjct: 661 EHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISR 715
Score = 317 bits (811), Expect(2) = 0.0
Identities = 181/384 (47%), Positives = 242/384 (63%), Gaps = 6/384 (1%)
Frame = -1
Query: 1232 KKLISRDIVFDETRFWNWKTNDVDEFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHIATP 1053
K LISRD+ FDE R W W+ ++E + V S H P + PE H
Sbjct: 710 KILISRDVQFDEERGWEWEDKSLEE------ELVWDNSD--HEP--AGEEGPEINHNGQQ 759
Query: 1052 NAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDY-----QLQVSGDDSSQI 888
+ E+ +V T R+ +P WM+DY ++ ++ D+ ++
Sbjct: 760 DQ--EETEEEEETVAETVHQNLPAVGTGGVRQR-QQPVWMKDYVVGNARVLITQDEEDEV 816
Query: 887 HLALFAG-SDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKT 711
LALF G DPV F++ Q W AM+AEI +I++ NTWEL +LP K IG+KW++KT
Sbjct: 817 -LALFIGPGDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKT 875
Query: 710 KYNSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDV 531
K+N G VDK KAR+V KGY Q VD+ EVF+PVA+ DTI+L++ LAA+ W VFQLDV
Sbjct: 876 KFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDV 935
Query: 530 KSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGF 351
KSAFL+GDL+E V+V+QP G+ + KVY+L+KALYGLKQAPRAWYSRIE +F K GF
Sbjct: 936 KSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGF 995
Query: 350 QKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHY 171
+K E TLFV+ K +FLVV +YVDDLIYT + + E FK SMM EF M+DLG + Y
Sbjct: 996 EKCYCEHTLFVK-KERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKY 1054
Query: 170 FLGLEVVQSSGGTFLS*KKYVSEI 99
FLG+EV+Q G F++ +KY +EI
Sbjct: 1055 FLGVEVIQDERGIFINQRKYAAEI 1078
>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
Length = 1334
Score = 508 bits (1307), Expect(2) = 0.0
Identities = 260/595 (43%), Positives = 377/595 (63%), Gaps = 9/595 (1%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R M I N MR+ GE+M D ++EK+LR++ KF YVV +IEES+++ L++D L SSLM+
Sbjct: 135 RVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIKELTVDGLQSSLMV 194
Query: 2790 HEQRINQHETVEQALQLQHXXXXXXXXXXXXXXKHCDENSKDKGSNNKGDQPFDKSKMQC 2611
HEQ +++H+ E+ L+ + G +G ++ ++C
Sbjct: 195 HEQNLSRHDVEERVLKAETQWRPDGGRGRGGSP---SRGRGRGGYQGRGRGYVNRDTVEC 251
Query: 2610 RRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETEISLLMACHHQEEIDHRNDMCYLDTG 2431
+ + GH++ C + +N+ E +++ LL+ H ++ D + +LD+G
Sbjct: 252 FKCHKMGHYKAEC-----PSWEKEANYVEMEED----LLLMAHVEQIGDEEKQIWFLDSG 302
Query: 2430 SSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGL 2251
SNHMCG + +F +LD F V+ GD+ +AV+G ++ + Q VIS+V++VPGL
Sbjct: 303 CSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQ-VISDVYFVPGL 361
Query: 2250 KSNLLSVGQLLEKGYELTLKNGVCRI-EDPKRGLITQVQMTRNRMFPLFL------RNDV 2092
K+NL SVGQL +KG ++ VC + ++ ++ MT+NRMF +F +
Sbjct: 362 KNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEE 421
Query: 2091 LPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDL--QEQLCEGCVVGKQN 1918
C ++ + +WH R+GHLN +GL L +++MVKGLP+ DL +E +C+ C+ GKQ
Sbjct: 422 TRCLQ-VIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQI 480
Query: 1917 RDSFPKESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFLNAKSEA 1738
R+S PKES W++ +VL+LVHTDICGPI P S KRY + FIDDFSRK W Y L+ KSE
Sbjct: 481 RESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSET 540
Query: 1737 FSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVA 1558
F FKEFK VE+++G + LRSDRGGEY S EF ++CK+ GIKRQ TAA+TPQQNGVA
Sbjct: 541 FQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVA 600
Query: 1557 ERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRV 1378
ERKNR+++NM R +L VP+KFWPE VQ+ VY+LNRSP++++ ++TP E WS KP V
Sbjct: 601 ERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSV 660
Query: 1377 SHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPITKKIDQSR 1213
HLR+FG +AYA V +KR KLD+K +KC+ G S SKAY+ +DP T KI SR
Sbjct: 661 EHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISR 715
Score = 317 bits (811), Expect(2) = 0.0
Identities = 181/384 (47%), Positives = 242/384 (63%), Gaps = 6/384 (1%)
Frame = -1
Query: 1232 KKLISRDIVFDETRFWNWKTNDVDEFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHIATP 1053
K LISRD+ FDE R W W+ ++E + V S H P + PE H
Sbjct: 710 KILISRDVQFDEERGWEWEDKSLEE------ELVWDNSD--HEP--AGEEGPEINHNGQQ 759
Query: 1052 NAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDY-----QLQVSGDDSSQI 888
+ E+ +V T R+ +P WM+DY ++ ++ D+ ++
Sbjct: 760 DQ--EETEEEEETVAETVHQNLPAVGTGGVRQR-QQPVWMKDYVVGNARVLITQDEEDEV 816
Query: 887 HLALFAG-SDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKT 711
LALF G DPV F++ Q W AM+AEI +I++ NTWEL +LP K IG+KW++KT
Sbjct: 817 -LALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKT 875
Query: 710 KYNSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDV 531
K+N G VDK KAR+V KGY Q VD+ EVF+PVA+ DTI+L++ LAA+ W VFQLDV
Sbjct: 876 KFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDV 935
Query: 530 KSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGF 351
KSAFL+GDL+E V+V+QP G+ + KVY+L+KALYGLKQAPRAWYSRIE +F K GF
Sbjct: 936 KSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGF 995
Query: 350 QKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHY 171
+K E TLFV+ K +FLVV +YVDDLIYT + + E FK SMM EF M+DLG + Y
Sbjct: 996 EKCYCEHTLFVK-KERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKY 1054
Query: 170 FLGLEVVQSSGGTFLS*KKYVSEI 99
FLG+EV+Q G F++ +KY +EI
Sbjct: 1055 FLGVEVIQDERGIFINQRKYAAEI 1078
>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
Length = 1207
Score = 508 bits (1307), Expect(2) = 0.0
Identities = 260/595 (43%), Positives = 377/595 (63%), Gaps = 9/595 (1%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R M I N MR+ GE+M D ++EK+LR++ KF YVV +IEES+++ L++D L SSLM+
Sbjct: 40 RVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIKELTVDGLQSSLMV 99
Query: 2790 HEQRINQHETVEQALQLQHXXXXXXXXXXXXXXKHCDENSKDKGSNNKGDQPFDKSKMQC 2611
HEQ +++H+ E+ L+ + G +G ++ ++C
Sbjct: 100 HEQNLSRHDVEERVLKAETQWRPDGGRGRGGSP---SRGRGRGGYQGRGRGYVNRDTVEC 156
Query: 2610 RRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETEISLLMACHHQEEIDHRNDMCYLDTG 2431
+ + GH++ C + +N+ E +++ LL+ H ++ D + +LD+G
Sbjct: 157 FKCHKMGHYKAEC-----PSWEKEANYVEMEED----LLLMAHVEQIGDEEKQIWFLDSG 207
Query: 2430 SSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGL 2251
SNHMCG + +F +LD F V+ GD+ +AV+G ++ + Q VIS+V++VPGL
Sbjct: 208 CSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQ-VISDVYFVPGL 266
Query: 2250 KSNLLSVGQLLEKGYELTLKNGVCRI-EDPKRGLITQVQMTRNRMFPLFL------RNDV 2092
K+NL SVGQL +KG ++ VC + ++ ++ MT+NRMF +F +
Sbjct: 267 KNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEE 326
Query: 2091 LPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDL--QEQLCEGCVVGKQN 1918
C ++ + +WH R+GHLN +GL L +++MVKGLP+ DL +E +C+ C+ GKQ
Sbjct: 327 TRCLQ-VIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQI 385
Query: 1917 RDSFPKESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFLNAKSEA 1738
R+S PKES W++ +VL+LVHTDICGPI P S KRY + FIDDFSRK W Y L+ KSE
Sbjct: 386 RESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSET 445
Query: 1737 FSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVA 1558
F FKEFK VE+++G + LRSDRGGEY S EF ++CK+ GIKRQ TAA+TPQQNGVA
Sbjct: 446 FQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVA 505
Query: 1557 ERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRV 1378
ERKNR+++NM R +L VP+KFWPE VQ+ VY+LNRSP++++ ++TP E WS KP V
Sbjct: 506 ERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSV 565
Query: 1377 SHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPITKKIDQSR 1213
HLR+FG +AYA V +KR KLD+K +KC+ G S SKAY+ +DP T KI SR
Sbjct: 566 EHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISR 620
Score = 317 bits (811), Expect(2) = 0.0
Identities = 181/384 (47%), Positives = 242/384 (63%), Gaps = 6/384 (1%)
Frame = -1
Query: 1232 KKLISRDIVFDETRFWNWKTNDVDEFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHIATP 1053
K LISRD+ FDE R W W+ ++E + V S H P + PE H
Sbjct: 615 KILISRDVQFDEERGWEWEDKSLEE------ELVWDNSD--HEP--AGEEGPEINHNGQQ 664
Query: 1052 NAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDY-----QLQVSGDDSSQI 888
+ E+ +V T R+ +P WM+DY ++ ++ D+ ++
Sbjct: 665 DQ--EETEEEEETVAETVHQNLPAVGTGGVRQR-QQPVWMKDYVVGNARVLITQDEEDEV 721
Query: 887 HLALFAG-SDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKT 711
LALF G DPV F++ Q W AM+AEI +I++ NTWEL +LP K IG+KW++KT
Sbjct: 722 -LALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKT 780
Query: 710 KYNSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDV 531
K+N G VDK KAR+V KGY Q VD+ EVF+PVA+ DTI+L++ LAA+ W VFQLDV
Sbjct: 781 KFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDV 840
Query: 530 KSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGF 351
KSAFL+GDL+E V+V+QP G+ + KVY+L+KALYGLKQAPRAWYSRIE +F K GF
Sbjct: 841 KSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGF 900
Query: 350 QKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHY 171
+K E TLFV+ K +FLVV +YVDDLIYT + + E FK SMM EF M+DLG + Y
Sbjct: 901 EKCYCEHTLFVK-KERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKY 959
Query: 170 FLGLEVVQSSGGTFLS*KKYVSEI 99
FLG+EV+Q G F++ +KY +EI
Sbjct: 960 FLGVEVIQDERGIFINQRKYAAEI 983
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 444 bits (1142), Expect(3) = 0.0
Identities = 222/420 (52%), Positives = 286/420 (68%)
Frame = -3
Query: 2472 EIDHRNDMCYLDTGSSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNN 2293
E D N +C G CG K F +LD+ V FGD+S + ++G I K+
Sbjct: 22 ESDLTNSLC----GVEGVTCGCKEKFVELDKKVKGNVSFGDSSKVQIQGKGTILISLKDG 77
Query: 2292 TQQVISNVFYVPGLKSNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFP 2113
++I++V+YVP LKSN+LS+GQL+EKGYE+ +K+ + D LI +V M+RNRMF
Sbjct: 78 AHKLITDVYYVPKLKSNILSLGQLVEKGYEIHMKDCCLWLRDKNSNLIAKVFMSRNRMFT 137
Query: 2112 LFLRNDVLPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCV 1933
L ++ + C + + + SW WH+R+GHLNF L L + MVKG+PQI+ QLCE C+
Sbjct: 138 LNIKTNEAKCLKASIKDESWCWHMRFGHLNFGALKSLGEEKMVKGMPQINHPNQLCEACL 197
Query: 1932 VGKQNRDSFPKESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFLN 1753
+GK R SFPKE+ RAK+ L+LV+TD+CGPI P S GN +YF+ FIDD+SRKTWVYFL
Sbjct: 198 LGKHARRSFPKEANSRAKEPLQLVYTDVCGPINPPSCGNNKYFLLFIDDYSRKTWVYFLK 257
Query: 1752 AKSEAFSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQ 1573
KSEAF FK FK LVEK++G +IK LRSDRGGE+ S EF +FC+K GI+R T +PQ
Sbjct: 258 QKSEAFVAFKNFKALVEKESGYVIKALRSDRGGEFTSKEFNEFCEKYGIRRPLTVPRSPQ 317
Query: 1572 QNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSG 1393
QNGVAERKNRTILNM R +L +PK+FW E V VY+ NRSPT++V + TP EAWSG
Sbjct: 318 QNGVAERKNRTILNMTRCMLKAKNMPKEFWAEAVACAVYLSNRSPTKNVKDQTPQEAWSG 377
Query: 1392 EKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPITKKIDQSR 1213
KPRV HLRVFG IAYAHV D+ R KLDD+ K +F+GY SK YK ++P K SR
Sbjct: 378 VKPRVDHLRVFGSIAYAHVPDQGRFKLDDRSEKHVFIGYDASSKGYKLYNPNNGKTIVSR 437
Score = 317 bits (813), Expect(3) = 0.0
Identities = 171/382 (44%), Positives = 239/382 (62%), Gaps = 4/382 (1%)
Frame = -1
Query: 1232 KKLISRDIVFDETRFWNWKTN-DVDEFIPVEDDF-VGSTSPEIHTPVISPPSSPEPQHIA 1059
K ++SRD+ F E WNW+ D +F P ++ + +P TP +SP S +
Sbjct: 432 KTIVSRDVEFYEEGTWNWEEKEDTYDFFPYFEEIDEEALTPNDSTPALSPTPSTNEASSS 491
Query: 1058 TPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIH-- 885
+ + +E RPRR N +Q D++ I+
Sbjct: 492 SEGSSSE-----------------------RPRRMRN---------IQELYDETEVINDL 519
Query: 884 LALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKY 705
LF S P++F + ++D +W AM+ EIKAI+K NTWEL+ LP GH+ IGVKWV+K K
Sbjct: 520 FCLFVDSKPLNFDEAMKDKRWRQAMEEEIKAIEKNNTWELSSLPKGHEAIGVKWVFKIKK 579
Query: 704 NSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKS 525
N+ G V++ KAR+V KGY Q+ VDYDEVF+PVAR +TI+LLI+LAAQ W +FQ DVKS
Sbjct: 580 NAKGEVERHKARLVAKGYKQQYEVDYDEVFAPVARMETIRLLISLAAQMKWRIFQFDVKS 639
Query: 524 AFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGFQK 345
AFLNG L+E VYV+QP G+V +G E KV +L KALYGLKQAPRAW + I+ YF GF
Sbjct: 640 AFLNGYLEEDVYVEQPMGFVIEGQEGKVLKLNKALYGLKQAPRAWNTHIDKYFQDNGFVH 699
Query: 344 SPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFL 165
+E L+V+ +G+ L +CLYVDDLI+T N+ L+E+FK SM EF+M+D+G++ Y+L
Sbjct: 700 CQNEYALYVKTFNNGDVLFICLYVDDLIFTGNNPNLFEDFKESMSREFDMTDMGLMSYYL 759
Query: 164 GLEVVQSSGGTFLS*KKYVSEI 99
G+EV Q+ G F+S ++Y E+
Sbjct: 760 GMEVKQTQNGIFVSQERYTKEV 781
Score = 34.7 bits (78), Expect(3) = 0.0
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -2
Query: 97 LCKFQMDTCNFVRSPAEVGMKLEKDPQGKKVD 2
L KF M CN V +P E G+KL K +G+KVD
Sbjct: 782 LKKFNMLDCNPVNTPMEGGLKLSKFDEGEKVD 813
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 431 bits (1109), Expect(2) = 0.0
Identities = 249/620 (40%), Positives = 351/620 (56%), Gaps = 34/620 (5%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R + I N+MR +GE+++D ++EK+L S+ K++Y+V + EES D LS D L S
Sbjct: 133 RVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAATEESKD---LSKDSLES---- 185
Query: 2790 HEQRINQHE--TVEQALQ----------------------LQHXXXXXXXXXXXXXXKHC 2683
HE+R Q E ++E A Q ++
Sbjct: 186 HEERKLQREGSSIENAFQSKLSFRPQNSRFRGNFQKNGFPMRDRGYFQKNGFSRQKEDGQ 245
Query: 2682 DENSKDKGSNNKGDQPFDKS---------KMQCRRYKRYGHFEVNCRVNLSKKNGERSNF 2530
+ K S+N KS KM C + KR GH CR + R+NF
Sbjct: 246 ERREKGTSSSNLWCDICQKSSHTTDMCWKKMTCNKCKRKGHIAKYCRT----REINRANF 301
Query: 2529 AEKDDETEISLLMACHHQEEIDHRNDMCYLDTGSSNHMCGDKSFFSDLDETFISTVKFGD 2350
+++ +++E ++ +CH +E ++D+ +D+G +NHM D + F ++D ++ + + G+
Sbjct: 302 SQEKEKSE-EMVFSCHTAQE--EKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHMGN 358
Query: 2349 NSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLKSNLLSVGQLLEKGYELTLKNGVCRIE 2170
S +G + Q + + I +V VP LK NLLS+GQLLE GY + ++ C+I
Sbjct: 359 GSIAQSEGKGTVAVQTADGPK-FIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKIL 417
Query: 2169 DPKRG-LITQVQMTRNRMFPLFLRNDVLPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQR 1993
D K L+ ++ M +NR F L + + S V+ S LWH R GHLN++ L +L +
Sbjct: 418 DRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSEVDI-SDLWHKRMGHLNYRALKLLRTK 476
Query: 1992 DMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKWRAKKVLELVHTDICGPITPLSNGNK 1813
MV+GLP I L+ CEGCV GKQ R SFP WRA LELVH DI G + +S G
Sbjct: 477 GMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHADIVGKVPTISEGGN 536
Query: 1812 RYFITFIDDFSRKTWVYFLNAKSEAFSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEF 1633
YFITFIDD++R WVYFL KS A +FK+FK +VE + IK LRSD+G EY S EF
Sbjct: 537 WYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGREYISKEF 596
Query: 1632 ADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYV 1453
+C+ GI+RQ TA ++ QQNGVAERKNRTI +M S+L G+PK FW E V VY+
Sbjct: 597 EKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAVYI 656
Query: 1452 LNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYS 1273
LNRSPT++V N TP EAW G+KP + H+RVFGCI YA V +KR K D+K +CIF+GY+
Sbjct: 657 LNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNKSDRCIFVGYA 716
Query: 1272 DVSKAYKFFDPITKKIDQSR 1213
D K Y+ ++ KKI SR
Sbjct: 717 DGIKGYRLYNLEKKKIIISR 736
Score = 321 bits (823), Expect(2) = 0.0
Identities = 176/387 (45%), Positives = 234/387 (60%), Gaps = 8/387 (2%)
Frame = -1
Query: 1235 QKKLISRDIVFDETRFWNWKTNDVDE--FIPV------EDDFVGSTSPEIHTPVISPPSS 1080
+K +ISRD +FDE+ WNWK+ + +P + G+ E HTP P S
Sbjct: 730 KKIIISRDAIFDESATWNWKSPEASSTPLLPTTTITLGQPHMHGTHEVEDHTPSPQPSSP 789
Query: 1079 PEPQHIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDD 900
++ ++P+ + S S PRR + +E Q
Sbjct: 790 MSSSSASSDSSPSSE--------------EQISTPESAPRRVRSMVELLESTSQQRG--- 832
Query: 899 SSQIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWV 720
S Q ++ +P SF++ + W+ AM+ EI I+K NTWEL D P + IGVKWV
Sbjct: 833 SEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGVKWV 892
Query: 719 YKTKYNSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQ 540
YKTK N DG V K KAR+V KG+ Q+ +DY E ++PVAR +TI+ +IALAAQ W ++Q
Sbjct: 893 YKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQ 952
Query: 539 LDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIK 360
LDVKSAFLNG L E +YV+QP G+ +G E KV+RL+KALYGLKQAPRAWYS+I+ YFI+
Sbjct: 953 LDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQ 1012
Query: 359 MGFQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGM 180
GF KS EPTL+V K + L+V LYVDDLIYT N + ++FK MM +EMSDLG+
Sbjct: 1013 KGFAKSISEPTLYVN-KTGTDILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGL 1071
Query: 179 LHYFLGLEVVQSSGGTFLS*KKYVSEI 99
LHYFLG+EV QS G F+S +KY I
Sbjct: 1072 LHYFLGMEVHQSDEGIFISQRKYAENI 1098
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 422 bits (1086), Expect(2) = 0.0
Identities = 233/567 (41%), Positives = 329/567 (58%), Gaps = 22/567 (3%)
Frame = -3
Query: 2847 ESHDVDTLSIDQLTSSLMIHEQRINQ--HETVEQALQLQHXXXXXXXXXXXXXXK----- 2689
E++D+ + S D + SSL+ HE R+ + +T E+A Q++
Sbjct: 2 EANDMSSYSFDTMMSSLLGHEDRLGKKTEKTEEKAFQMKGESSGQKNSSVFEAAGRGRGR 61
Query: 2688 --------------HCDENSKDKGSNNKGDQPFDKSKMQCRRYKRYGHFEVNCRVNLSKK 2551
+ D +S S N+G +KS +QC K+YGH + NC KK
Sbjct: 62 FGGHGNYGRGKGRGYYDNSSSSNQSYNRGT---NKSDIQCHYCKKYGHMQTNCW----KK 114
Query: 2550 NGERSNFAEKDDETEISLLMACHHQEEIDHRNDMCYLDTGSSNHMCGDKSFFSDLDETFI 2371
E + + E E L EE + YLD+G SNHM G KS F +LDE+
Sbjct: 115 QKEEKHACFVEQENEQPRLFMAFESEEAS--KSVWYLDSGCSNHMTGTKSSFKELDESHK 172
Query: 2370 STVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLKSNLLSVGQLLEKGYELTLK 2191
VK G++ + V+G + + ++I V+Y+P L NLLSVGQ++E +
Sbjct: 173 LKVKLGNDKEVQVEGRGVVAVHNGHGNLKLIYGVYYIPDLAHNLLSVGQMVENNCSVLFD 232
Query: 2190 NGVCRIEDPKRGL-ITQVQMTRNRMFPLFLRNDVLPCFSSIVNNPSWLWHLRYGHLNFKG 2014
C I++ K G+ + V+ T N ++PL + + + V++ S L HLRYGHL+ G
Sbjct: 233 GNECVIKEKKSGVTLAMVKKTSNNLYPLEMSSVETKALVAKVSDISKLLHLRYGHLHENG 292
Query: 2013 LGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKWRAKKVLELVHTDICGPIT 1834
L +L Q+DMV GLP+I + LCEGCV GKQ+R SFP RA + LE+VH D+CGP+
Sbjct: 293 LRVLNQKDMVIGLPKIGALK-LCEGCVYGKQSRRSFPVGRARRATQYLEIVHADLCGPMQ 351
Query: 1833 PLSNGNKRYFITFIDDFSRKTWVYFLNAKSEAFSVFKEFKVLVEKDAGCLIKTLRSDRGG 1654
S G +YF+ DD+SR +WVYFL +K EAF +FK FK LVEK + +K LR+DRGG
Sbjct: 352 TASLGGSKYFLMLTDDYSRMSWVYFLKSKGEAFDMFKNFKALVEKQSEQQVKVLRTDRGG 411
Query: 1653 EYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEV 1474
E+ S +F FC+K+GI + T A+TP+QNGVAERKN T++ M RS+L +P +FW E
Sbjct: 412 EFTSTKFNQFCEKEGIHHELTTAYTPEQNGVAERKNTTVVEMARSMLKERNLPNQFWAES 471
Query: 1473 VQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVK 1294
V+ VY+LN SPT++V+N TP EAW G KP VSHLRVFG + Y+ + RKKLD+K K
Sbjct: 472 VRTAVYLLNISPTKAVLNRTPYEAWCGRKPGVSHLRVFGSVCYSLIDAHNRKKLDEKSEK 531
Query: 1293 CIFLGYSDVSKAYKFFDPITKKIDQSR 1213
CIFLGY SK Y+ ++P++ KI +SR
Sbjct: 532 CIFLGYCSQSKGYRLYNPVSGKIVESR 558
Score = 315 bits (808), Expect(2) = 0.0
Identities = 173/379 (45%), Positives = 235/379 (62%), Gaps = 5/379 (1%)
Frame = -1
Query: 1220 SRDIVFDETRFWNWKTNDVDEFIP--VEDDFVGSTSPE---IHTPVISPPSSPEPQHIAT 1056
SR++ FDE W W+ D E + V D+ + SP +TP S PSSP P +
Sbjct: 557 SRNVTFDEEAVWTWREGDNGELVEIFVNDEQEENPSPANSATNTPASSAPSSPGPNN--- 613
Query: 1055 PNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIHLAL 876
N ++ S + S P++ S E Y+ Q +
Sbjct: 614 GNGSSD---------------GEGSSSISPPQKF---RSLREIYEEQHA----------- 644
Query: 875 FAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYNSD 696
F +DPV+ + +W AM+ EI +I+K TW+L +LP IGVKWV+KTKY +D
Sbjct: 645 FFSADPVTVNEAATKEEWRKAMEEEIASIEKNQTWQLVELPEEKHSIGVKWVFKTKYQAD 704
Query: 695 GMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSAFL 516
+ K KAR+VVKGYAQE VDY++ FSPVAR DT++ L+AL A WP++Q DVKSAFL
Sbjct: 705 DNIQKYKARLVVKGYAQEYGVDYEKTFSPVARFDTLRTLLALGAYMHWPIYQFDVKSAFL 764
Query: 515 NGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGFQKSPH 336
NG+L+E VYVDQP G++ +G E VYRL KALYGLKQAPRAWY++I++YF + GF++S
Sbjct: 765 NGELREEVYVDQPEGFIVEGREGFVYRLYKALYGLKQAPRAWYNKIDSYFAETGFERSKS 824
Query: 335 EPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLGLE 156
EPTL+++ + G+ LVVCLYVDD+IY + L EFKASMM +FEM+DLG+L++FLGLE
Sbjct: 825 EPTLYIKKQGAGDILVVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTDLGLLYFFLGLE 884
Query: 155 VVQSSGGTFLS*KKYVSEI 99
V Q G F+S KY ++
Sbjct: 885 VKQVEDGVFVSQHKYACDL 903
>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 685 bits (1768), Expect = 0.0
Identities = 343/608 (56%), Positives = 428/608 (70%), Gaps = 22/608 (3%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R M+I NKMR HG+ +DV I+EK+LRSMT F++VV SIEESHD+D LSID+L SSL++
Sbjct: 101 RTMAIXNKMRIHGDKTEDVTIVEKILRSMTPXFNFVVCSIEESHDIDELSIDELQSSLLV 160
Query: 2790 HEQRINQHETVEQALQL---------------QHXXXXXXXXXXXXXXKHCDENSKDKGS 2656
HE++ NQ E EQAL+ + +H ++++ +G
Sbjct: 161 HERKFNQQEKEEQALKASTENHLATRGDRXRGRSRGRGRGNYDRGNQHQHQRQDNRFQGR 220
Query: 2655 NNKGDQPF-------DKSKMQCRRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETEISL 2497
G+ DKS ++C R RYGH++ CR N++K+ ER+NFAEK++E +SL
Sbjct: 221 GQGGNYSTTYKSXSTDKSNVECYRCHRYGHYKXECRTNMNKQGEERTNFAEKEEE--VSL 278
Query: 2496 LMACHHQEEIDHRNDMCYLDTGSSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*D 2317
LMACH + H N + Y+DTG SNHMCGDKS FSDLDETF +V FGDNS ++V G
Sbjct: 279 LMACH-ANQXTHPN-LWYIDTGCSNHMCGDKSAFSDLDETFRXSVTFGDNSKVSVMGKGS 336
Query: 2316 IKFQAKNNTQQVISNVFYVPGLKSNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQ 2137
+ +K + Q+ISNVF+VP LK+NLLSV QL EKGYE+ +K+GVCRI+D K GLI QV
Sbjct: 337 VXIHSKEKSDQIISNVFFVPDLKTNLLSVXQLQEKGYEIFIKDGVCRIQDEKLGLIAQVN 396
Query: 2136 MTRNRMFPLFLRNDVLPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQ 1957
MT NRMFPL+L N CFS+ + + WLWH RYGHLNF GL L Q++MV GLP I
Sbjct: 397 MTTNRMFPLYLDNTTQNCFSTKLMDEGWLWHFRYGHLNFGGLKTLQQKNMVTGLPPIXTP 456
Query: 1956 EQLCEGCVVGKQNRDSFPKESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSR 1777
Q+CE CVVGKQ+R FPK WR KVLELVH+DICGPI P SNG KRYFITFI D+S
Sbjct: 457 SQICEECVVGKQHRYQFPKGKSWRXNKVLELVHSDICGPINPTSNGGKRYFITFIXDYSX 516
Query: 1776 KTWVYFLNAKSEAFSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQ 1597
KTWVYFL KSEAFS FK FK+LVEK+A IK RSD GGEY S EF +FC+ GI++Q
Sbjct: 517 KTWVYFLQEKSEAFSTFKSFKMLVEKEAXKPIKIFRSDXGGEYTSQEFVNFCENHGIQKQ 576
Query: 1596 FTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINM 1417
TAA++PQQNG + RKNRTILNMVR++L +P+ FWPE V W++++LNRSPT V N+
Sbjct: 577 LTAAYSPQQNGXSXRKNRTILNMVRTILSKGHIPRSFWPEAVIWSIHILNRSPTLVVQNV 636
Query: 1416 TPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPI 1237
TP EAW+G KP V+H R+FGCIAYAH+ +KRKKLDDKG KCIFLG S+ SKAYK ++PI
Sbjct: 637 TPXEAWNGRKPSVNHFRIFGCIAYAHIPXQKRKKLDDKGEKCIFLGVSEXSKAYKLYNPI 696
Query: 1236 TKKIDQSR 1213
TKKI SR
Sbjct: 697 TKKIXISR 704
Score = 357 bits (916), Expect = 4e-95
Identities = 200/408 (49%), Positives = 247/408 (60%), Gaps = 1/408 (0%)
Frame = -1
Query: 1319 KSLMIKG*NVFFLVIVMFQKLTSFLIQ*QKKL-ISRDIVFDETRFWNWKTNDVDEFIPVE 1143
K L KG FL + K KK+ ISRDI+FDE FW W N + ++
Sbjct: 669 KKLDDKGEKCIFLGVSEXSKAYKLYNPITKKIXISRDIIFDEGSFWKWDDNTTKQ--QIQ 726
Query: 1142 DDFVGSTSPEIHTPVISPPSSPEPQHIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRP 963
+F G E P+ Q I P + A +
Sbjct: 727 ABFDGENEEERQQPL--------QQQIPXAEIPPNE-------------------APTTA 759
Query: 962 RRTINRPSWMEDYQLQVSGDDSSQIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDK 783
+ P + E + V + DP +F+ V++ KW AMDAEI AI++
Sbjct: 760 ETSPTTPEFDEQVEAXVGXN------------CDPTTFESAVKESKWRKAMDAEIAAIER 807
Query: 782 KNTWELADLPYGHKPIGVKWVYKTKYNSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVA 603
+TWEL++LP GHK IGVKWVYKTK +G VDK KAR+V KGY QE VDY EVF+PVA
Sbjct: 808 NDTWELSELPKGHKTIGVKWVYKTKLKENGEVDKYKARLVAKGYKQEFGVDYKEVFAPVA 867
Query: 602 RHDTIKLLIALAAQNSWPVFQLDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKA 423
RHDTI+L+IALAAQNSWP+FQLDV SAFL+G+L+E V+VDQPPGY++ +E KVYRL+KA
Sbjct: 868 RHDTIRLVIALAAQNSWPIFQLDVXSAFLHGNLEEQVFVDQPPGYIKVKNEHKVYRLKKA 927
Query: 422 LYGLKQAPRAWYSRIEAYFIKMGFQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDR 243
LYGLKQAPRAWYSRIEAYF+K GFQK P+E TLFV+ G L+VCLYVDD+I+T ND
Sbjct: 928 LYGLKQAPRAWYSRIEAYFLKEGFQKCPYEHTLFVKVSNGGKMLIVCLYVDDIIFTGNDS 987
Query: 242 LLYEEFKASMMAEFEMSDLGMLHYFLGLEVVQSSGGTFLS*KKYVSEI 99
+++E FK SMM EFEMSDL VVQS G F+S KKYV EI
Sbjct: 988 VMFERFKKSMMVEFEMSDL----------VVQSDTGIFISQKKYVREI 1025
>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
gi|31429795|gb|AAP51797.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1350
Score = 398 bits (1022), Expect(2) = 0.0
Identities = 232/601 (38%), Positives = 329/601 (54%), Gaps = 15/601 (2%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R + I N+MR +GE+++D ++EK+L S+ K++Y+V +IEES D+ TL+I QL SSL
Sbjct: 133 RVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTLTIQQLMSSLES 192
Query: 2790 HEQRINQHE--TVEQALQLQHXXXXXXXXXXXXXXKHCDENSKDKGSNNKGDQPFDKSKM 2617
HE+R Q E ++E A Q + +NS+ +G+ K + P
Sbjct: 193 HEERKLQREGSSIENAFQSKLSFRP--------------QNSRFRGNFQKNEFPM----- 233
Query: 2616 QCRRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETEISLLM------------ACHHQE 2473
+ G+F+ N S++ + EK+ E I L+ +CH +
Sbjct: 234 -----RDRGYFQKN---GFSRQKEDGQERREKELEKLIGLIFHKKRKKSEEMVFSCHTAQ 285
Query: 2472 EIDHRNDMCYLDTGSSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNN 2293
E ++D+ +D+G +NHM D + F ++D ++ + + G+ S +G
Sbjct: 286 E--EKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHMGNGSIAQSEG----------- 332
Query: 2292 TQQVISNVFYVPGLKSNLLSVGQLLEKGYELTLKNGVCRIEDPKRG-LITQVQMTRNRMF 2116
K+ C+I D K L+ ++ M +NR F
Sbjct: 333 ---------------------------------KDFSCKILDRKNNRLVAKINMEKNRNF 359
Query: 2115 PLFLRNDVLPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGC 1936
L + + S ++ S LWH R GHLN++ L +L + MV+GLP I L+ CEGC
Sbjct: 360 LLRMNHPTQMALRSEIDI-SDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDPCEGC 418
Query: 1935 VVGKQNRDSFPKESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFL 1756
V GKQ R SFP WRA LELVHTDI G + +S G YFITFIDD++R WVYFL
Sbjct: 419 VFGKQIRASFPHSGAWRASAPLELVHTDIVGKVPTISEGGNWYFITFIDDYTRMIWVYFL 478
Query: 1755 NAKSEAFSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTP 1576
KS A +FK+FK +VE + IK LRSD+GGEY S EF +C+ GI+RQ TA ++
Sbjct: 479 KEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTAGYSA 538
Query: 1575 QQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWS 1396
QQNGVAERKNRTI +M S+L G+PK FW E V +Y+LNRSPT++V N TP EAW
Sbjct: 539 QQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWY 598
Query: 1395 GEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPITKKIDQS 1216
G+KP + H+RVFGCI YA V +KR K D+K CIF+GY+D K Y+ ++ KKI S
Sbjct: 599 GKKPVIGHMRVFGCICYAQVPAQKRVKFDNKSDWCIFVGYADGIKGYRLYNLEKKKIIIS 658
Query: 1215 R 1213
R
Sbjct: 659 R 659
Score = 305 bits (782), Expect(2) = 0.0
Identities = 166/379 (43%), Positives = 222/379 (58%)
Frame = -1
Query: 1235 QKKLISRDIVFDETRFWNWKTNDVDEFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHIAT 1056
+K +ISRD++FDE+ WNWK+ + + + P +H + H ++
Sbjct: 653 KKIIISRDVIFDESATWNWKSPEASSTPLLPTTTITLGQPHMHG------THGVEDHTSS 706
Query: 1055 PNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIHLAL 876
P + + S S PRR + +E Q S Q
Sbjct: 707 PQSSSPMSSSSASSDSSPSSEEQISTPESAPRRVRSMVELLESTSQQRG---SEQHEFCN 763
Query: 875 FAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYNSD 696
++ +P SF++ + W+ AM+ EI I+K NTWEL D P K IGVKWVYKTK N D
Sbjct: 764 YSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDRKVIGVKWVYKTKLNPD 823
Query: 695 GMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSAFL 516
G V K KAR+V KG+ Q+ +DY E ++PVAR +TI+ +IALAAQ W ++QLDVKSAFL
Sbjct: 824 GSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFL 883
Query: 515 NGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGFQKSPH 336
NG L E +YV+QP G+ +G E KV+RL+KALYGLKQAPRAWYS+I+ YFI+ GF KS
Sbjct: 884 NGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDQYFIQKGFAKS-- 941
Query: 335 EPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLGLE 156
+ L+V LYVDDLIYT N + ++FK MM +EMSDLG+LHYFLG+E
Sbjct: 942 ---------ISTDILIVSLYVDDLIYTANSEKMMQDFKKDMMHTYEMSDLGLLHYFLGME 992
Query: 155 VVQSSGGTFLS*KKYVSEI 99
V QS G F+S +KY I
Sbjct: 993 VHQSDEGIFISQRKYAENI 1011
>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
Length = 1314
Score = 447 bits (1149), Expect(2) = 0.0
Identities = 252/620 (40%), Positives = 355/620 (57%), Gaps = 34/620 (5%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R + I N+MR +GE+++D ++EK+L S+ K++Y+V +IEES D+ TL+I QL SSL
Sbjct: 133 RVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTLTIQQLMSSLES 192
Query: 2790 HEQRINQHE--TVEQALQ----------------------LQHXXXXXXXXXXXXXXKHC 2683
HE+R Q E ++E A Q ++
Sbjct: 193 HEERKLQREGSSIENAFQSKLSFRPQNSRFRGNFQKNGFPMRDRGYFQKNGFSTQKEDGQ 252
Query: 2682 DENSKDKGSNNKGDQPFDKS---------KMQCRRYKRYGHFEVNCRVNLSKKNGERSNF 2530
+ K S+N KS KM C + KR GH CR + R+NF
Sbjct: 253 ERREKSTSSSNLWCDISQKSSHTTDMCWKKMTCNKCKRKGHIAKYCRT----REINRANF 308
Query: 2529 AEKDDETEISLLMACHHQEEIDHRNDMCYLDTGSSNHMCGDKSFFSDLDETFISTVKFGD 2350
+++ +++E ++ +CH +E ++D+ +D+G +NHM D + F ++D + + + G+
Sbjct: 309 SQEKEKSE-EMVFSCHTAQE--EKDDVWVIDSGCTNHMAADPNLFREMDSLYHAKIHMGN 365
Query: 2349 NSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLKSNLLSVGQLLEKGYELTLKNGVCRIE 2170
S +G + Q + + I +V VP LK NLLS+GQLLE GY + ++ C+I
Sbjct: 366 GSIAQSEGKGTVAVQTADGPK-FIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKIL 424
Query: 2169 DPKRG-LITQVQMTRNRMFPLFLRNDVLPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQR 1993
D K L+ ++ M +NR F L + + S V+ S LWH R GHLN++ L +L +
Sbjct: 425 DRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSEVDI-SDLWHKRMGHLNYRALKLLRTK 483
Query: 1992 DMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKWRAKKVLELVHTDICGPITPLSNGNK 1813
MV+GLP I L+ CEGCV GKQ + SFP WRA ELVHTDI G + +S G
Sbjct: 484 GMVQGLPFITLKSDPCEGCVFGKQIQASFPHSGAWRASAPFELVHTDIVGKVPTMSEGGN 543
Query: 1812 RYFITFIDDFSRKTWVYFLNAKSEAFSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEF 1633
YFITFIDD++R WVYFL KS A FK+FKV+VE + IK LRSD+GGEY S EF
Sbjct: 544 WYFITFIDDYTRMIWVYFLKEKSAALETFKKFKVMVENQSNRKIKVLRSDQGGEYISKEF 603
Query: 1632 ADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYV 1453
+C+ GI+RQ T ++ QQNGVAERKNRTI +M S+L G+PK FW E V VY+
Sbjct: 604 EKYCENAGIRRQLTTGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAVYI 663
Query: 1452 LNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYS 1273
LNRSPT++V N TP EAW G+KP + H+RVF CI YA V +KR K D+K +CIF+GY+
Sbjct: 664 LNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFACICYAQVPAQKRVKFDNKSNRCIFVGYA 723
Query: 1272 DVSKAYKFFDPITKKIDQSR 1213
D K Y+ ++ KKI SR
Sbjct: 724 DGIKGYRLYNLEKKKIIISR 743
Score = 253 bits (646), Expect(2) = 0.0
Identities = 152/387 (39%), Positives = 205/387 (52%), Gaps = 8/387 (2%)
Frame = -1
Query: 1235 QKKLISRDIVFDETRFWNWKTNDVDE--FIPV------EDDFVGSTSPEIHTPVISPPSS 1080
+K +ISRD+ FDE+ WNWK+ + +P + G+ E HTP P S
Sbjct: 737 KKIIISRDVFFDESATWNWKSPEASSTPLLPTTTITLGQPHMHGTHEVEDHTPSPQPSSP 796
Query: 1079 PEPQHIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDD 900
++ ++P+ + S S PRR + +E Q
Sbjct: 797 MSSSSASSDSSPSSE--------------EQISTPESAPRRVRSMVELLESTSQQRG--- 839
Query: 899 SSQIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWV 720
S Q ++ +P SF++ + W+ AM+ EI I+K NTWE D P + IGVKWV
Sbjct: 840 SEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWEFVDRPRDREVIGVKWV 899
Query: 719 YKTKYNSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQ 540
YKTK N DG V K KAR+V KG+ Q+ +DY E ++PVAR +TI+ +IALAAQ W ++Q
Sbjct: 900 YKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQ 959
Query: 539 LDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIK 360
LDVKSAFLNG L E +YV+QP + +G E K
Sbjct: 960 LDVKSAFLNGYLDEEIYVEQPEWFSVQGGENK---------------------------- 991
Query: 359 MGFQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGM 180
GF KS EPTL+V K + L+V LYVDDLIYT N + ++FK MM +EMSDLG+
Sbjct: 992 KGFAKSISEPTLYVN-KTGTDILIVSLYVDDLIYTGNSDKMMQDFKKDMMHTYEMSDLGL 1050
Query: 179 LHYFLGLEVVQSSGGTFLS*KKYVSEI 99
LHYFLG+EV QS G F+S +KY I
Sbjct: 1051 LHYFLGMEVHQSDEGIFISQRKYAENI 1077
>ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group]
gi|20514806|gb|AAM23251.1|AC092553_17 Putative pol
polyprotein [Oryza sativa Japonica Group]
gi|21326494|gb|AAM47622.1|AC122147_11 Putative pol
polyprotein [Oryza sativa Japonica Group]
gi|31430018|gb|AAP51989.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group] gi|113638707|dbj|BAF26012.1| Os10g0130700
[Oryza sativa Japonica Group]
Length = 1426
Score = 422 bits (1085), Expect(2) = 0.0
Identities = 232/636 (36%), Positives = 361/636 (56%), Gaps = 50/636 (7%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R ++ +R G M+D + +K+LR + K+ V S+E+ DV T+++++L L
Sbjct: 162 RLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLDVKTMALEELVGRLST 221
Query: 2790 HEQRINQHETVE-----------QALQLQHXXXXXXXXXXXXXXKHCDENSKDK-GSNNK 2647
+ + E + QA Q +N + K G + K
Sbjct: 222 VDSYSDDEEGSDGGKLYLTEEQWQARVKQREQEGSGNSGNKGRGAPGTQNHRGKPGGSPK 281
Query: 2646 GDQPF-------DKSKMQCRRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETEISLLMA 2488
G + D S+++C +GH+ CR ++ GE +N + +E E +LLMA
Sbjct: 282 GKEAATGANSSRDISRVKCFNCDEFGHYARQCRKPRRQRRGE-ANLVQAAEE-EPTLLMA 339
Query: 2487 ---------------------CHHQEE---IDHRNDM-------CYLDTGSSNHMCGDKS 2401
H E+ +DH + +LDTG++NHM G +S
Sbjct: 340 HVVGVSLAGEATLGRTPGGQEVHLTEKKVILDHEDGGEEEVTRDWFLDTGATNHMTGVRS 399
Query: 2400 FFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLKSNLLSVGQL 2221
F++LD + TVKFGD S I ++G + F+ KN+ + + V+Y+P L+ N++SVG+L
Sbjct: 400 AFAELDTGVVGTVKFGDGSVIEIQGRGTVVFRCKNSDHRSLDTVYYIPKLRKNIISVGRL 459
Query: 2220 LEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIVNNPSWLWHL 2041
+GY+ + GVC + DP L+ +V+ N ++ L L C ++ + +W WH
Sbjct: 460 DARGYDAHIWGGVCTLRDPDGLLLAKVKRDINYLYILKLHIANPVCMAASGGDMAWRWHA 519
Query: 2040 RYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKWRAKKVLELV 1861
R+GHLNF+ L L Q +MV+GLP ID +QLC+GC+ GKQ R FP+E+K+RA++ LELV
Sbjct: 520 RFGHLNFQSLRRLAQGNMVRGLPIIDHTDQLCDGCLAGKQRRLPFPEEAKFRAQEALELV 579
Query: 1860 HTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFLNAKSEAFSVFKEFKVLVEKDAGCLI 1681
H D+CGPITP + G ++YF+ +DD SR W+ L+ K EA + K+F+V VE ++G +
Sbjct: 580 HGDLCGPITPATPGGRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQVGVELESGRKL 639
Query: 1680 KTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSG 1501
+ LR+DRGGE+ S EF D+C G++R+ TA ++PQQNGV ER+N+T++ RS+L +G
Sbjct: 640 RALRTDRGGEFTSVEFMDYCADHGMRRELTAPYSPQQNGVVERRNQTVVAAARSMLKAAG 699
Query: 1500 VPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKR 1321
+P FW E V VYVLNRSPT+++ +TP EAW G +P V HLRVFGC+ Y
Sbjct: 700 MPACFWGEAVVAAVYVLNRSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNL 759
Query: 1320 KKLDDKGVKCIFLGYSDVSKAYKFFDPITKKIDQSR 1213
+KLDD+G + +F+GY SKAY+ +DP+ +++ SR
Sbjct: 760 RKLDDRGTRMVFIGYEQGSKAYRMYDPVARRVCVSR 795
Score = 277 bits (708), Expect(2) = 0.0
Identities = 160/385 (41%), Positives = 215/385 (55%), Gaps = 10/385 (2%)
Frame = -1
Query: 1223 ISRDIVFDETRFWNWKTND----------VDEFIPVEDDFVGSTSPEIHTPVISPPSSPE 1074
+SRD+VFDE W W+ + VD F+ D V + TPV
Sbjct: 793 VSRDVVFDEAATWAWRDPETEATEEEEFTVDFFVNPVDSVVADLGEQASTPV---QGGTY 849
Query: 1073 PQHIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSS 894
P ATP +P E + R RR + S E + D S
Sbjct: 850 PASTATPPSPPEVPAGVEFCSPPNSVTPGTNEGPIRYRRVQDILSATEPV---LDFDYSD 906
Query: 893 QIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYK 714
Q L A +P+S + Q W AM E+K+I+ TW A+LP GHK IG+KWVYK
Sbjct: 907 Q---CLLASEEPMSLAEAEQQLCWRQAMQEELKSIEDNQTWSFAELPVGHKAIGLKWVYK 963
Query: 713 TKYNSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLD 534
K + G+V K KAR+V KGY Q++ +D++EVF+PVAR +T++LLIA+AA W + +D
Sbjct: 964 VKKDPSGVVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIAVAANKGWEIHHMD 1023
Query: 533 VKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMG 354
VKSAFLNGDL+E VYV QPPG++ KG E +V RL+KALYGLKQAPRAW +++ I +
Sbjct: 1024 VKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQAPRAWNAKLHNTLISLN 1083
Query: 353 FQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLH 174
F KS E ++V+ L+V +YVDDLI + + FK M +F MSDLG+L
Sbjct: 1084 FIKSETESAVYVRGTGSSR-LIVGVYVDDLIISGAQASEIDFFKEEMKKKFRMSDLGLLS 1142
Query: 173 YFLGLEVVQSSGGTFLS*KKYVSEI 99
Y+LG+EVVQ G FLS Y ++I
Sbjct: 1143 YYLGMEVVQKDDGVFLSQTAYAAKI 1167
>emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group]
Length = 1426
Score = 417 bits (1071), Expect(2) = 0.0
Identities = 231/636 (36%), Positives = 359/636 (56%), Gaps = 50/636 (7%)
Frame = -3
Query: 2970 REMSIANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMI 2791
R ++ +R G M+D + +K+LR + K+ V S+E+ DV T+++++L L
Sbjct: 162 RLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLDVKTMALEELVGRLST 221
Query: 2790 HEQRINQHETVE-----------QALQLQHXXXXXXXXXXXXXXKHCDENSKDK-GSNNK 2647
+ + E + QA Q +N + K G + K
Sbjct: 222 VDSYSDDEEGSDGGKLYLTEEQWQARVKQREQEGSGNSGNKGRGAPGTQNHRGKPGGSPK 281
Query: 2646 GDQPF-------DKSKMQCRRYKRYGHFEVNCRVNLSKKNGERSNFAEKDDETEISLLMA 2488
G + D S+++C +GH+ CR ++ GE +N + +E E +LLMA
Sbjct: 282 GKEAATGANSSRDISRVKCFNCDEFGHYARQCRKPRRQRRGE-ANLVQAAEE-EPTLLMA 339
Query: 2487 ---------------------CHHQEE---IDHRNDM-------CYLDTGSSNHMCGDKS 2401
H E+ +DH + +LDTG++NHM G +S
Sbjct: 340 HVVGVSLAGEATLGRTPGGQEVHLTEKKVILDHEDGGEEEVTRDWFLDTGATNHMTGVRS 399
Query: 2400 FFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLKSNLLSVGQL 2221
F++LD + TVKFGD S I ++G + F+ KN + + V+Y+P L+ N++SVG+L
Sbjct: 400 AFAELDTGVVGTVKFGDGSVIEIQGRGTVVFRCKNGDHRSLDTVYYIPKLRKNIISVGRL 459
Query: 2220 LEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIVNNPSWLWHL 2041
+GY+ + GVC + DP L+ +V+ N ++ L L C ++ + + WH
Sbjct: 460 DARGYDAHIWGGVCTLRDPDGLLLAKVKRDINYLYILKLHIANPVCMAASGGDTARRWHA 519
Query: 2040 RYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKWRAKKVLELV 1861
R+GHLNF+ L L Q +MV+GLP ID +QLC+GC+ GKQ R FP+E+K+RA++ LELV
Sbjct: 520 RFGHLNFQSLRRLAQGNMVRGLPIIDHTDQLCDGCLAGKQRRLPFPEEAKFRAQEALELV 579
Query: 1860 HTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFLNAKSEAFSVFKEFKVLVEKDAGCLI 1681
H D+CGPITP + G ++YF+ +DD SR W+ L+ K EA + K+F+V VE ++G +
Sbjct: 580 HGDLCGPITPATPGGRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQVGVELESGRKL 639
Query: 1680 KTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSG 1501
+ LR+DRGGE+ S EF D+C G++R+ TA ++PQQNGV ER+N+T++ RS+L +G
Sbjct: 640 RALRTDRGGEFTSVEFMDYCADHGMRRELTAPYSPQQNGVVERRNQTVVAAARSMLKAAG 699
Query: 1500 VPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKR 1321
+P FW E V VYVLNRSPT+++ +TP EAW G +P V HLRVFGC+ Y
Sbjct: 700 MPACFWGEAVVAAVYVLNRSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNL 759
Query: 1320 KKLDDKGVKCIFLGYSDVSKAYKFFDPITKKIDQSR 1213
+KLDD+G + +F+GY SKAY+ +DP+ +++ SR
Sbjct: 760 RKLDDRGTRMVFIGYEQGSKAYRMYDPVARRVCVSR 795
Score = 277 bits (708), Expect(2) = 0.0
Identities = 160/385 (41%), Positives = 215/385 (55%), Gaps = 10/385 (2%)
Frame = -1
Query: 1223 ISRDIVFDETRFWNWKTND----------VDEFIPVEDDFVGSTSPEIHTPVISPPSSPE 1074
+SRD+VFDE W W+ + VD F+ D V + TPV
Sbjct: 793 VSRDVVFDEAATWAWRDPETEATEEEEFTVDFFVNPVDSVVADLGEQASTPV---QGGTY 849
Query: 1073 PQHIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSS 894
P ATP +P E + R RR + S E + D S
Sbjct: 850 PASTATPPSPPEVPAGVEFCSPPNSVTPGTNEGPIRYRRVQDILSATEPV---LDFDYSD 906
Query: 893 QIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYK 714
Q L A +P+S + Q W AM E+K+I+ TW A+LP GHK IG+KWVYK
Sbjct: 907 Q---CLLASEEPMSLAEAEQQLCWRQAMQEELKSIEDNQTWSFAELPVGHKAIGLKWVYK 963
Query: 713 TKYNSDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLD 534
K + G+V K KAR+V KGY Q++ +D++EVF+PVAR +T++LLIA+AA W + +D
Sbjct: 964 VKKDPSGVVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIAVAANKGWEIHHMD 1023
Query: 533 VKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMG 354
VKSAFLNGDL+E VYV QPPG++ KG E +V RL+KALYGLKQAPRAW +++ I +
Sbjct: 1024 VKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQAPRAWNAKLHNTLISLN 1083
Query: 353 FQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLH 174
F KS E ++V+ L+V +YVDDLI + + FK M +F MSDLG+L
Sbjct: 1084 FIKSETESAVYVRGTGSSR-LIVGVYVDDLIISGAQASEIDFFKEEMKKKFRMSDLGLLS 1142
Query: 173 YFLGLEVVQSSGGTFLS*KKYVSEI 99
Y+LG+EVVQ G FLS Y ++I
Sbjct: 1143 YYLGMEVVQKDDGVFLSQTAYAAKI 1167
>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
Length = 1239
Score = 417 bits (1071), Expect(2) = 0.0
Identities = 224/601 (37%), Positives = 344/601 (57%), Gaps = 20/601 (3%)
Frame = -3
Query: 2955 ANKMRSHGENMDDVVIIEKVLRSMTSKFDYVVFSIEESHDVDTLSIDQLTSSLMIHEQRI 2776
A + S G +++ +++K L + SKF + ++E+ D++ + + L E+R+
Sbjct: 18 AGTVASLGHTIEEAKLVKKFLSCLPSKFLQLSATLEQVLDLNNTRYEDVVGRLKAFEERL 77
Query: 2775 NQHETVE--------QALQLQHXXXXXXXXXXXXXXKHCDENSKDKGSNNKGDQPFDK-- 2626
E + + L H + +GS+N G++ +K
Sbjct: 78 RGEERMRGEKLEDNGKLLYSDHGTKGRGRGSNRGRG----NRGRGRGSSNGGERNKEKKD 133
Query: 2625 -SKMQCRRYKRYGHF-----EVNCRVNLSKKNGERSNFAEKDDET----EISLLMACHHQ 2476
S+++C + GHF E N L+K E + A E E S++ Q
Sbjct: 134 YSQIECFHCHKKGHFASVCPEKNDDHQLNKAETEVAEAALYMHEVVFLNEESVMPKKLEQ 193
Query: 2475 EEIDHRNDMCYLDTGSSNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKN 2296
+ D N YLD G+SNHM GDKSFFS+L+E+ VKFGD S + + G I F+AK
Sbjct: 194 NKTDDGN--WYLDNGASNHMTGDKSFFSELNESIKGRVKFGDGSCVKINGKGSIIFEAKT 251
Query: 2295 NTQQVISNVFYVPGLKSNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMF 2116
Q++++N++Y+P L+SN+LS+GQ E+G ++ +K+ + DP L+ +V + NR++
Sbjct: 252 GEQKLLTNIYYIPELRSNILSLGQATEQGCDVRMKDNYLTLRDPSGRLLVKVLRSPNRLY 311
Query: 2115 PLFLRNDVLPCFSSIVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGC 1936
+ L+ C + +N W WH R GH+NFK + + + +MV+GLP+I+ +++LCE C
Sbjct: 312 KVSLKVGKPSCLLTKINEEPWRWHARLGHINFKTIKDMAKLEMVRGLPEINEEKKLCESC 371
Query: 1935 VVGKQNRDSFPKESKWRAKKVLELVHTDICGPITPLSNGNKRYFITFIDDFSRKTWVYFL 1756
+VGKQ R+SFP + R+ +VLEL+H D+CGPI+P + RY IDD +R W L
Sbjct: 372 LVGKQTRNSFPSATPHRSSQVLELLHADLCGPISPSTLAQNRYIFVIIDDNTRYMWSILL 431
Query: 1755 NAKSEAFSVFKEFKVLVEKDAGCLIKTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTP 1576
KSE F FK FK LVEK+ +I TLR+DRGGE+ S +F D+C +GI+R TA +TP
Sbjct: 432 KEKSEVFEKFKTFKALVEKEVNKVIVTLRTDRGGEFTSRDFQDYCNNNGIRRHLTAPYTP 491
Query: 1575 QQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWS 1396
QQNGV ER+NRT++ M RS+L VP W E V+ Y++NR PT+++ N TP E++
Sbjct: 492 QQNGVVERRNRTLMEMTRSMLKAMNVPNYMWGEAVRHATYLINRVPTRALKNQTPYESFK 551
Query: 1395 GEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPITKKIDQS 1216
G KP + H+RVFGC+AYA + KKLDD+ + LG SKAY+ ++P T++I S
Sbjct: 552 GRKPSIGHIRVFGCLAYAKLDAALLKKLDDRSQTLVHLGIEPGSKAYRLYNPSTRRIVVS 611
Query: 1215 R 1213
R
Sbjct: 612 R 612
Score = 260 bits (664), Expect(2) = 0.0
Identities = 147/381 (38%), Positives = 224/381 (58%), Gaps = 5/381 (1%)
Frame = -1
Query: 1226 LISRDIVFDETRFWNWKTNDVDEFIPVEDDFV----GSTSPEIHTPVISPPSSPEPQHIA 1059
++SRD+ FDE WNW N+ D+ E GS+ E + P + S + ++IA
Sbjct: 609 VVSRDVKFDEKACWNW--NETDKGNQEESGKFHMTWGSSIDEGNGPFVI--GSHQEENIA 664
Query: 1058 TPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIHLA 879
T E+ V R R + P +EDY L + L
Sbjct: 665 TETEQQEE--------TTEPTPEVDHVEPRRSSREVKLPKHLEDYILLAE----IECELL 712
Query: 878 LFAGSD-PVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYN 702
L + +D P ++++ +W A + EI +I++ TW+L D P+G K IG+KW++K K N
Sbjct: 713 LCSINDEPSTYQEAKIHVRWTKACEDEIDSINRNQTWKLVDKPHGVKVIGLKWIFKIKRN 772
Query: 701 SDGMVDKCKARMVVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSA 522
+DG ++K KAR+V KGY QE +D++EVF+PVAR ++I+LLI+LA+ W + LDVK+A
Sbjct: 773 ADGSINKFKARLVAKGYVQEHGIDFEEVFAPVARIESIRLLISLASAKGWELHHLDVKTA 832
Query: 521 FLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRIEAYFIKMGFQKS 342
FL+G+L E VYV QP G+ +KG E KV++L KALYGL+QAPRAW ++++ + F+K
Sbjct: 833 FLHGELNEEVYVTQPEGFEKKGEEHKVFKLSKALYGLRQAPRAWNTKLDRVLKSLRFKKC 892
Query: 341 PHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLG 162
E +++ + + D L++ +YVDDL T N + +EFK +M +FEMSDLG+L Y+LG
Sbjct: 893 MKESSVYRREEGD-KLLIIAIYVDDLFVTGNSTKIIKEFKTAMSHKFEMSDLGLLTYYLG 951
Query: 161 LEVVQSSGGTFLS*KKYVSEI 99
+EV QS+ G + + Y I
Sbjct: 952 IEVKQSTRGITIKQEAYAKRI 972