BLASTX nr result
ID: Papaver30_contig00045068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00045068
(4783 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 816 0.0
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera] 777 0.0
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 801 0.0
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 769 0.0
ref|XP_013654240.1| PREDICTED: uncharacterized protein LOC106359... 737 0.0
gb|ABA99961.1| retrotransposon protein, putative, unclassified [... 737 0.0
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 795 0.0
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 785 0.0
gb|AAP54937.2| retrotransposon protein, putative, unclassified [... 731 0.0
ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648... 780 0.0
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 773 0.0
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri] 692 0.0
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 765 0.0
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g... 777 0.0
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group] 775 0.0
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ... 770 0.0
ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isof... 768 0.0
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays] 763 0.0
gb|KOM49767.1| hypothetical protein LR48_Vigan08g059400 [Vigna a... 738 0.0
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja... 753 0.0
>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 816 bits (2108), Expect(4) = 0.0
Identities = 417/806 (51%), Positives = 534/806 (66%), Gaps = 2/806 (0%)
Frame = -3
Query: 2873 EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIH 2694
EML +G+++P +PFSSP+LLV+K DGSWR CVDYR LN TIK KFPIP+++ELLDE+H
Sbjct: 586 EMLQSGIVRPGQSPFSSPVLLVRKHDGSWRLCVDYRALNKETIKVKFPIPIVDELLDELH 645
Query: 2693 GAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVF 2514
G+ F+K+DL++GYHQIRV P D KTAF+TH GH+EFLV+PFGLTNAP +FQ+LMND+F
Sbjct: 646 GSTIFSKLDLRSGYHQIRVHPEDIPKTAFRTHEGHYEFLVIPFGLTNAPTTFQSLMNDIF 705
Query: 2513 QPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGH 2334
+PYL K S L + LFAK SKC FG + IEYLGH
Sbjct: 706 KPYLRKFILVFFYDILVYSKSLADHVHHLQTVLDILKQHQLFAKKSKCCFGCSEIEYLGH 765
Query: 2333 IINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKN 2154
+I+ V DP KIE ML WP PT+LKSLR FLGLTGYYRKFI+ YGLI+ PLT LLKKN
Sbjct: 766 LISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAAPLTALLKKN 825
Query: 2153 KFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYFN 1974
F+ +++ F L +FS PF I+ DA GVGAVLMQ RP+AY +
Sbjct: 826 SFKWTESAKRAFQDLKHDVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAYMS 885
Query: 1973 KGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQK 1794
+ + + LSTYEKELM +V+ V KWR YLLG F I TD SLKY +EQK+ + +QQK
Sbjct: 886 QAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTDQXSLKYLLEQKMGTPLQQK 945
Query: 1793 WLSKLLGYDYEVSYKKGTDNRVADALSRVQ--LTTASCTAISQLQLTWIQEVIQSYSSDT 1620
W++KLLGY++ V YK+G +N+VADALSR AI+ TW++++ Y+ D
Sbjct: 946 WITKLLGYEFVVEYKQGKENKVADALSRKMEDQKEGKLYAITAPANTWLEQLRTXYAIDP 1005
Query: 1619 LALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQ 1440
+I L A Y G+L Y GR+YI + +LR Q+L +HSS GHSG
Sbjct: 1006 KLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPASKELREQILYLLHSSPQGGHSGFH 1065
Query: 1439 ASYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDF 1260
+ ++K FYW G+++ + ++IKECD QQ+KS N P + W IS+DF
Sbjct: 1066 KTLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPTKVWTDISLDF 1125
Query: 1259 ITRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDR 1080
I LP SE VI+VVVDR +KY+HF+P+SHP+TAS +A++FL NI+KLHGLP+SIV+DR
Sbjct: 1126 IEGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDR 1185
Query: 1079 DNIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWL 900
D F S FWK+ F GTTL S+AYHPQ DGQT VN VE YLRC + +P WV WL
Sbjct: 1186 DPTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWVKWL 1245
Query: 899 PIAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAMSDLLKY 720
P+AEWW+N+ H S KL+PFE++YGYPPP+ E L+ R + +L+
Sbjct: 1246 PLAEWWYNTNIHASTKLSPFESVYGYPPPKLIPYTPGTTQLQEVENTLKTRDEIIRILRT 1305
Query: 719 ALVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFWGPIQVLE 540
L AQ RMK+ A+ K RSF +GDLVYLRL PY+Q SV RRNLKL+ F+GP +VLE
Sbjct: 1306 NLQLAQDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLE 1365
Query: 539 KIGSVAYKLQLPPNSKIHPVFHVSQL 462
KIG+VAY+L+LPP +KIHPVFHVS L
Sbjct: 1366 KIGTVAYRLELPPEAKIHPVFHVSCL 1391
Score = 92.4 bits (228), Expect(4) = 0.0
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Frame = -1
Query: 3343 MQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQGHNESA 3164
MQ + + D +L LGGCD+VLGV ++ + P+ + F++L + LQG + +
Sbjct: 427 MQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQMEFSVWDKPRKLQGMSPTG 486
Query: 3163 QISMMSASVAHNVFKKNKHGMIGRLYSISANXXXXXXXPQ---ITELLQSYTSVFSEPTS 2993
IS++ V ++NK G++ +L + I +LL Y VFSEP
Sbjct: 487 -ISLVEGEKFGKVSRQNKRGLVIQLIDFENSSLLSIETSAEPLIYDLLNLYPEVFSEPKG 545
Query: 2992 LPPSRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKLCRKCYPQGL 2852
LPP+R HDHHI L + P PY+ PY QK+ +E + + G+
Sbjct: 546 LPPTRNHDHHIVLHSGAKPVCVGPYRYPYFQKSEIENIVHEMLQSGI 592
Score = 86.7 bits (213), Expect(4) = 0.0
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Frame = -3
Query: 3824 VTPTTSHANSTLPPIKKLSYTDMRACREKGLCYNCDEVYTTGHKCTRQ*LFML------D 3663
+ P + + P+++LS + M+ R+KGLCYNCD+ + GHKC LF++ D
Sbjct: 260 IGPPSPPEKRAIVPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIMECDESSD 319
Query: 3662 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHALAGHISHSTIESHGVIKKKPITILIDS 3483
+HAL G + T+ G I + + IL+D+
Sbjct: 320 DEVPKSEVAEGRASKSKEETPIVEIEPGISIHALVGSPNPKTMRFLGHICGRAVVILVDT 379
Query: 3482 GSTHNFLDPEVAKLCGCVMEPTTPLQVAVANGHKLLSQARCPSL 3351
GSTHNF+DP V + PT L V VANG + S+ C ++
Sbjct: 380 GSTHNFMDPSVIQRAHLPSNPTEGLSVKVANGQAVRSEGSCAAV 423
Score = 51.2 bits (121), Expect(4) = 0.0
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = -2
Query: 486 PCFSCLSIKLKLGAGILP*TSLPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAH 307
P F +K KLG +LP DK+ ++ P ++L +R K + +VLV+W
Sbjct: 1384 PVFHVSCLKEKLGERHQLVVTLPPXDKDGVIRXEPEEILHRRLKKKKNHAVTEVLVKWKG 1443
Query: 306 STPDEATWEDTLTIHHQFPKLI 241
DEA+W + T+ ++FP L+
Sbjct: 1444 LGEDEASWVEYSTLVNEFPDLV 1465
>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
Length = 1366
Score = 777 bits (2006), Expect(4) = 0.0
Identities = 404/806 (50%), Positives = 527/806 (65%), Gaps = 2/806 (0%)
Frame = -3
Query: 2873 EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIH 2694
EML +G+++PS +PFSSP+LLV+K DGSWR CVDYR LN TIK KFPIP+++ELLDE+H
Sbjct: 553 EMLQSGIVRPSQSPFSSPVLLVRKHDGSWRLCVDYRALNKETIKVKFPIPIVDELLDELH 612
Query: 2693 GAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVF 2514
G+ F+K+DL++GYHQIRV P D KTAF+TH GH+EFLVMPFGLTNAPA+FQ+LMND+F
Sbjct: 613 GSTIFSKLDLRSGYHQIRVHPEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNDIF 672
Query: 2513 QPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGH 2334
+PYL K S +L + LFAK SKC FG + IEYLGH
Sbjct: 673 KPYLRKFILVFFDDILVYSKNLADHVYHLQTVLDILKQHQLFAKKSKCCFGCSEIEYLGH 732
Query: 2333 IINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKN 2154
+I+ V DP KIE ML WP PT+LKSLR FLGLTGYYRKFI+ YGLI+ PLT LLKKN
Sbjct: 733 LISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAAPLTXLLKKN 792
Query: 2153 KFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYFN 1974
F+ +++ F L +FS PF I+ DA GVGAVLMQ RP+AY +
Sbjct: 793 SFKWTESAKRAFQDLKHAVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAYMS 852
Query: 1973 KGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQK 1794
+ + + LSTYEKELM +V+ V KWR YLLG F I TD QSLKY +E+K+ + +QQ+
Sbjct: 853 QAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTDQQSLKYLLEEKMGTPLQQQ 912
Query: 1793 WLSKLLGYDYEVSYKKGTDNRVADALSR--VQLTTASCTAISQLQLTWIQEVIQSYSSDT 1620
W++KLLGY++ V YK+G +N+VADALSR AI+ TW++++ SY+ D
Sbjct: 913 WITKLLGYEFVVEYKQGKENKVADALSRKMEDQKEGKLYAITAPANTWLEQLRTSYAIDP 972
Query: 1619 LALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQ 1440
+I L A Y G+L Y GR+YI + +LR Q+L +HSS GHSG
Sbjct: 973 KLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPASKELREQILYLLHSSPQGGHSGFH 1032
Query: 1439 ASYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDF 1260
+ ++K FYW G+++ + ++IKECD QQ+KS N H +
Sbjct: 1033 KTLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENI----------------HPAGLLQ 1076
Query: 1259 ITRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDR 1080
+P + VI+VVVDR +KY+HF+P+SHP+TAS +A++FL NI+KLHGLP+SIV+DR
Sbjct: 1077 PLPIPT---KSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDR 1133
Query: 1079 DNIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWL 900
D F S FWK+ F GTTL S+AYHPQ DGQT VN VE YLRC + +P W WL
Sbjct: 1134 DPTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWXKWL 1193
Query: 899 PIAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAMSDLLKY 720
P+AEWW+N+ H S KL+PFE++YGYPPP+ I +P T+ +E + ++++
Sbjct: 1194 PLAEWWYNTNIHASTKLSPFESVYGYPPPKL-IPYTP--GTTQLQEVENTLKTRDEIIRI 1250
Query: 719 ALVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFWGPIQVLE 540
+ KR RSF +GDLVYLRL PY+Q SV RRNLKL+ F+GP +VLE
Sbjct: 1251 LHI------------KRTARSFNIGDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLE 1298
Query: 539 KIGSVAYKLQLPPNSKIHPVFHVSQL 462
KIG+VAY+L+LPP +KIHPVFHVS L
Sbjct: 1299 KIGTVAYRLELPPEAKIHPVFHVSCL 1324
Score = 93.2 bits (230), Expect(4) = 0.0
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Frame = -1
Query: 3343 MQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQGHNESA 3164
MQ + + D +L LGGCD+VLGV ++ + P+ + F++L + LQG + +
Sbjct: 394 MQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQMEFSVWDKPRKLQGMSPTG 453
Query: 3163 QISMMSASVAHNVFKKNKHGMIGRLYSISANXXXXXXXPQ---ITELLQSYTSVFSEPTS 2993
IS++ V ++NK G++ +L + I +LL Y+ VFSEP
Sbjct: 454 -ISLVEGEKFGKVSRQNKRGLVIQLIDFENSSLLSIETSAEPLIYDLLNLYSEVFSEPKG 512
Query: 2992 LPPSRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKLCRKCYPQGL 2852
LPP+R HDHHI L + P PY+ PY QK+ +E + + G+
Sbjct: 513 LPPTRNHDHHIVLHSGAKPVCVGPYRYPYFQKSKIENIVHEMLQSGI 559
Score = 86.7 bits (213), Expect(4) = 0.0
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Frame = -3
Query: 3824 VTPTTSHANSTLPPIKKLSYTDMRACREKGLCYNCDEVYTTGHKCTRQ*LFML------D 3663
+ P + + P+++LS + M+ R+KGLCYNCD+ + GHKC LF++ D
Sbjct: 227 IGPPSPPEKRAIVPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSXRLFIMECDESSD 286
Query: 3662 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHALAGHISHSTIESHGVIKKKPITILIDS 3483
+HAL G + T+ G I + + IL+D+
Sbjct: 287 DEVPKSEVAEGRASKSKEETPIVEIEPGISIHALVGSPNPKTMRFLGHICGRAVVILVDT 346
Query: 3482 GSTHNFLDPEVAKLCGCVMEPTTPLQVAVANGHKLLSQARCPSL 3351
GSTHNF+DP V + PT L V VANG + S+ C ++
Sbjct: 347 GSTHNFMDPSVIQRAHLPSNPTEGLSVKVANGQAVRSEGSCAAV 390
Score = 25.0 bits (53), Expect(4) = 0.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 486 PCFSCLSIKLKLGAGILP*TSLPSTDKESSLKVTPLQVLAKRTLMK 349
P F +K KLG +LP DK+ ++ P ++L +R K
Sbjct: 1317 PVFHVSCLKEKLGERHQLVVTLPPADKDGVIRPEPEEILHRRLKKK 1362
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 801 bits (2069), Expect(4) = 0.0
Identities = 393/813 (48%), Positives = 540/813 (66%)
Frame = -3
Query: 2900 KNSS*KTM*EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPL 2721
KN + + +L + +I+PS +P++SP +LVKKKDGSWR C+DYR+LNA TIK+K+PIP+
Sbjct: 452 KNEMEQQIQNLLESSIIRPSTSPYASPAILVKKKDGSWRLCIDYRELNAQTIKNKYPIPV 511
Query: 2720 IEELLDEIHGAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPAS 2541
IE+LLDE+ GAK F+K+DL++GYHQIR+ D KTAF T+ GH+E+LVMPFGLTNAPA+
Sbjct: 512 IEDLLDELFGAKVFSKLDLRSGYHQIRMNREDICKTAFNTYLGHYEYLVMPFGLTNAPAT 571
Query: 2540 FQTLMNDVFQPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFG 2361
FQ LMN +F YL + S + + + LFAKL+KC F
Sbjct: 572 FQCLMNSIFAQYLRRFILVFFDDILIYSKNDEEHQEHLTIVLGLLRQHQLFAKLNKCVFA 631
Query: 2360 KT*IEYLGHIINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISK 2181
+ + YLGH+I+G V+ DP KI +++WP P L LR FLG+TGYYR+FI+HYG+I +
Sbjct: 632 VSQVTYLGHVISGDGVATDPDKISTIVEWPKPQDLTQLRSFLGMTGYYRRFIRHYGVICR 691
Query: 2180 PLTELLKKNKFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQ 2001
PL ++L+K F F + L +FS+ F +ETDA G+G VLMQ
Sbjct: 692 PLYDMLRKGGFDWKDPQDEAFVKLKLAMTTAPVLALPDFSENFTLETDASGTGIGGVLMQ 751
Query: 2000 TRRPIAYFNKGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQ 1821
RP+AYF++ +GVR AA+STY++E + ++ + +WR Y LGT+ I TD QSLK+ +Q
Sbjct: 752 RGRPLAYFSRTLGVRAAAMSTYDREALAIIESLKRWRHYFLGTQLIIRTDQQSLKFMTDQ 811
Query: 1820 KLHSFVQQKWLSKLLGYDYEVSYKKGTDNRVADALSRVQLTTASCTAISQLQLTWIQEVI 1641
K+ +Q K + +LL +DY + YKKG +N+VADALSR S AIS +WI+ V
Sbjct: 812 KVAEGIQHKLMLRLLEFDYTIEYKKGKENKVADALSR---RGNSVMAISIAVPSWIEAVT 868
Query: 1640 QSYSSDTLALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSV 1461
SY +D +L+ +L + P A YTL GVL+Y GRIY+G +LR ++ ++H S+V
Sbjct: 869 NSYQNDANCKELMEQLTLAPNADSGYTLNAGVLRYKGRIYVGKDPELRLNIIHSLHMSAV 928
Query: 1460 RGHSGTQASYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAW 1281
GHSG A+YQ+ K FYW G+K+ + ++EC Q+ K+ + PD AW
Sbjct: 929 GGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLPIPDMAW 988
Query: 1280 HHISMDFITRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLP 1101
HISMDFI LP S+G+EVI VVVDRFTKY+H +PLSHP++ VA+ F+DNI+KLHG P
Sbjct: 989 THISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHGFP 1048
Query: 1100 SSIVSDRDNIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRP 921
+IVSDRD IF S W++ F M L STAYHPQ DGQT RVN VE+YLRCM P
Sbjct: 1049 IAIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYHPQTDGQTERVNQCVESYLRCMAMQEP 1108
Query: 920 SKWVTWLPIAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQA 741
KWV+WLP+AEWW+N+T+HT+LKL+PF+ LYG+PPP P + A ++L+++Q
Sbjct: 1109 KKWVSWLPLAEWWYNTTFHTALKLSPFQALYGFPPPLINEVAIPGPEDNEARDFLEEKQV 1168
Query: 740 MSDLLKYALVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFW 561
M LK L +AQ RMK+ A+ R ER VGD+VYL++ PYR T+ L++ LKL +IF+
Sbjct: 1169 MLRRLKENLAQAQTRMKKYADLNRSERQLTVGDMVYLKMQPYRTTAFGLKQALKLTSIFY 1228
Query: 560 GPIQVLEKIGSVAYKLQLPPNSKIHPVFHVSQL 462
GP +V++++G VAY+LQLP IHPVFH+SQL
Sbjct: 1229 GPFRVMQRVGKVAYRLQLPEGVGIHPVFHISQL 1261
Score = 81.3 bits (199), Expect(4) = 0.0
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Frame = -1
Query: 3313 RVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGD-NITLQGHNESAQISMMSASV 3137
++L L DMVLG D M + SP+ ++ G + L + S ++ ++
Sbjct: 313 KILKLKNYDMVLGCDWMYQHSPINIDLKTRRLTIMKDGKLAMILDDQSVSETARLLESNE 372
Query: 3136 AHNVFKKNKHGMIGRLYSISANXXXXXXXPQITELLQSYTSVFSEPTSLPPSRAHDHHIP 2957
+ K G + L S+ L+Q+Y +F EPT LPP R DH IP
Sbjct: 373 LEKLTGKGIMGYVIELQSLKGEERNNTVNTLYQNLIQTYMDIFKEPTDLPPERGCDHSIP 432
Query: 2956 LKPLSVPPNQRPYKIPYIQKTVVEK 2882
+K SVPPN RPY++P+ QK +E+
Sbjct: 433 IKDNSVPPNIRPYRVPHRQKNEMEQ 457
Score = 57.0 bits (136), Expect(4) = 0.0
Identities = 28/80 (35%), Positives = 40/80 (50%)
Frame = -2
Query: 486 PCFSCLSIKLKLGAGILP*TSLPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAH 307
P F +K GA +P LP K+ +K P V R + +N + Q LVQWA+
Sbjct: 1254 PVFHISQLKQHCGANSIPSPELPMVGKDGKIKTEPSLVKETRAMPRNHTLVTQWLVQWAN 1313
Query: 306 STPDEATWEDTLTIHHQFPK 247
P++A+WED I FP+
Sbjct: 1314 LPPEDASWEDASFIKSTFPE 1333
Score = 34.7 bits (78), Expect(4) = 0.0
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 3494 LIDSGSTHNFLDPEVAKLCGCVMEPTTPLQVAVANGHKLLSQARCPSL 3351
L+DSGSTH F+D A C + ++V VA G +L+ + P +
Sbjct: 252 LLDSGSTHTFMDLRFATKTTCRIMCNNLMKVTVAGGGSILTGSHVPEV 299
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 769 bits (1986), Expect(4) = 0.0
Identities = 387/805 (48%), Positives = 524/805 (65%), Gaps = 1/805 (0%)
Frame = -3
Query: 2873 EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIH 2694
E+ T I+ S +P+ SP ++V+KKDGSWR CVDYR+LNA TIK+KFP+P+IE+LLDE+H
Sbjct: 732 ELFRTQEIRISDSPYVSPAVMVRKKDGSWRLCVDYRQLNAQTIKNKFPMPIIEDLLDELH 791
Query: 2693 GAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVF 2514
GAK F+K+DL++GYHQIR+ D KTAF+TH GH+E+ VMPFGLTNAPA+FQ LMN V
Sbjct: 792 GAKVFSKLDLRSGYHQIRMAEGDIPKTAFRTHLGHYEYNVMPFGLTNAPATFQALMNQVL 851
Query: 2513 QPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGH 2334
P+L K S + L +L KC FG + YLGH
Sbjct: 852 APFLRKFVLVFFADILIYSKTQSEHLEHIKLVMQALSANQLVVRLKKCEFGLDRVSYLGH 911
Query: 2333 IINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKN 2154
II+ + VS DP+KI + P + +R FLG+ GYYR+FI+ YG+I +PL +LLKK+
Sbjct: 912 IISSEGVSTDPKKISDIKNRKPPKNVTEVREFLGMAGYYRRFIKGYGVICRPLHDLLKKD 971
Query: 2153 KFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYFN 1974
F+ Q F+ L +FS+PF IETDAC G+GAVLMQ RP+AYF+
Sbjct: 972 GFKWGDTQQEAFELLKEKMCNSPVLALPDFSQPFVIETDACGIGIGAVLMQKGRPLAYFS 1031
Query: 1973 KGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQK 1794
K +G + AA S YEKE + ++ + KWR Y+LG I TD QSLK+ M Q+L +Q K
Sbjct: 1032 KALGPKAAAQSVYEKEAIAILEALKKWRHYILGGSLIIKTDQQSLKFMMSQRLVEGIQHK 1091
Query: 1793 WLSKLLGYDYEVSYKKGTDNRVADALSRV-QLTTASCTAISQLQLTWIQEVIQSYSSDTL 1617
L KL+ +DY + YK G +N VADALSR L C I+ + W+Q++ +SY D
Sbjct: 1092 LLLKLMEFDYVIEYKSGKENLVADALSRSPNLKEEQCLPITVVVPEWVQDIKRSYEEDIF 1151
Query: 1616 ALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQA 1437
A ++ + + Y LE G+LKY GRIY+G T ++R +L A H+S GHSG +A
Sbjct: 1152 AHKILSLIETDGDPERHYKLESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRA 1211
Query: 1436 SYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDFI 1257
+Y + K FYW GLK+ + YI+EC + Q K+ + PD AW HI+MDFI
Sbjct: 1212 TYHRIKQLFYWPGLKKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFI 1271
Query: 1256 TRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDRD 1077
LPKS+G++VILVVVDR TKY+HFL LSHP+T V ++F+DNI+KLHG+P IV+DRD
Sbjct: 1272 EGLPKSQGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRD 1331
Query: 1076 NIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWLP 897
+F SNF+++ F L STA+HPQ DGQT RVN +E+YLR MT P KW +WL
Sbjct: 1332 RVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWLA 1391
Query: 896 IAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAMSDLLKYA 717
+AEWW+N+TYHTS+++TPF+ LYGYPPPQ P + A L+ + + LK +
Sbjct: 1392 LAEWWYNTTYHTSIQMTPFQALYGYPPPQITEFAIPCNMSEEARVTLEDKALILQKLKSS 1451
Query: 716 LVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFWGPIQVLEK 537
+ EAQ R+K A+K R ER+ ++GD+VYL+L PYRQ ++ +R +LKL + ++GP +V+EK
Sbjct: 1452 IGEAQRRIKFYADKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEK 1511
Query: 536 IGSVAYKLQLPPNSKIHPVFHVSQL 462
+G+VAYKLQLP + IHPVFHVSQL
Sbjct: 1512 MGAVAYKLQLPDGAGIHPVFHVSQL 1536
Score = 78.6 bits (192), Expect(4) = 0.0
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Frame = -1
Query: 3355 LSWQMQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQGH 3176
+ +++Q F +L+L D++LG D + + SP+ K +T G + +Q
Sbjct: 570 MEYEIQGESFTNSFNLLSLERYDIILGADWIFKYSPITLDLRKREMKITKGGRELEIQDF 629
Query: 3175 NESAQISMMSASVAHNVFKKNKHGMIGRLYSIS-ANXXXXXXXPQITELLQSYTSVFSEP 2999
+ + +S + KK G + ++ +I+ + I +LQS+ V EP
Sbjct: 630 TKPGKYFQVSNKKMGKMIKKGALGCVIQINAITDQSNVEVGIPKDIQIVLQSFPKVLKEP 689
Query: 2998 TSLPPSRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKLCRKCY 2864
LPP R+ DH I LK S PPN RPY++P+ QK +E + + +
Sbjct: 690 KGLPPRRSCDHVINLKVGSEPPNLRPYRVPHFQKGAMEDIITELF 734
Score = 62.0 bits (149), Expect(4) = 0.0
Identities = 29/79 (36%), Positives = 43/79 (54%)
Frame = -2
Query: 486 PCFSCLSIKLKLGAGILP*TSLPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAH 307
P F +K LGA +P +LP+ + +K P VL +R + ++ +P+ Q L+ W +
Sbjct: 1529 PVFHVSQLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWEN 1588
Query: 306 STPDEATWEDTLTIHHQFP 250
TP EATWED I FP
Sbjct: 1589 LTPAEATWEDASYIQAAFP 1607
Score = 36.2 bits (82), Expect(4) = 0.0
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -3
Query: 3494 LIDSGSTHNFLDPEVAKLCGCVMEPTTPLQVAVANGHKLLSQARCPSL 3351
L+DSGST F+D + A C +E T +V VA G +L S+ P +
Sbjct: 523 LVDSGSTTTFMDSKFAIKSQCTLENTKMRKVIVAGGGELKSELIVPGM 570
>ref|XP_013654240.1| PREDICTED: uncharacterized protein LOC106359020 [Brassica napus]
Length = 2394
Score = 737 bits (1902), Expect(4) = 0.0
Identities = 370/781 (47%), Positives = 510/781 (65%)
Frame = -3
Query: 2867 LSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIHGA 2688
L G +Q S + ++SP++LVKKKDG+WR CVDYR LN T+KD+FPIPLIE+L+DE+ G+
Sbjct: 1543 LKAGKVQHSSSSYASPVVLVKKKDGTWRLCVDYRGLNLSTVKDRFPIPLIEDLMDELGGS 1602
Query: 2687 KFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVFQP 2508
K ++KIDL+AGYHQ+R+ P D HKTAFKTH GH+E+LVMPFGLTNAPA+FQ LMN VFQ
Sbjct: 1603 KIYSKIDLRAGYHQVRMDPNDIHKTAFKTHSGHYEYLVMPFGLTNAPATFQGLMNSVFQE 1662
Query: 2507 YLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGHII 2328
L K S ++ + LFAK SKC F +EYLGH I
Sbjct: 1663 LLRKGVLIFFDDILVYSPSIEVHVKQLRQVFELMRLNNLFAKKSKCFFATHRVEYLGHYI 1722
Query: 2327 NGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKNKF 2148
+ +S P+KI+ + +WP P TLK LR FLGL GYYR+F+ +G I++PLT L KK+ F
Sbjct: 1723 QAEGISTCPEKIKAITEWPIPLTLKKLRGFLGLAGYYRRFVMSFGSIARPLTVLTKKDNF 1782
Query: 2147 QCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYFNKG 1968
+ + ++ F++ L F KPF +ETDAC G+GAVLMQ P+AY ++
Sbjct: 1783 EWSDEAELAFEKLKKALSEAPVLALPCFDKPFVVETDACGQGIGAVLMQEGHPVAYISRH 1842
Query: 1967 MGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQKWL 1788
+ + LS YEKEL+ VV V KWR YLL F I TD +SLKY +EQ+L++ +QQ+WL
Sbjct: 1843 LKGKQLHLSIYEKELLAVVFAVQKWRHYLLSRHFIIKTDQKSLKYLLEQRLNTPIQQQWL 1902
Query: 1787 SKLLGYDYEVSYKKGTDNRVADALSRVQLTTASCTAISQLQLTWIQEVIQSYSSDTLALD 1608
KLL +DYE+ Y++G +N VADALSRV+ + A++ L+ ++++ +Y +D +
Sbjct: 1903 PKLLEFDYEIQYRQGKENVVADALSRVEGSEVLHMAMTVLECDLLKQIQDAYGTDMVLKG 1962
Query: 1607 LIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQASYQ 1428
LI L + P + +TL QG+L+ +I + ++R +L +H SS GHSG ++Q
Sbjct: 1963 LIEDLRVAPLSHKHFTLAQGILRRKSKIVVPAGAEIRGSILQWLHGSSAGGHSGRDVTHQ 2022
Query: 1427 KSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDFITRL 1248
+ K FYW G+ + + Q+I+EC QQ K + P+ W IS+DFI L
Sbjct: 2023 RVKSLFYWKGMSKDIQQFIRECQVCQQCKYDTAAYPGLIQPLPIPEAVWTDISLDFIDGL 2082
Query: 1247 PKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDRDNIF 1068
P S G+ VILVVVDR TK +HF+ L+HP+TASSVA+ FLDNI+KLHG+P SIVSDRD +F
Sbjct: 2083 PLSFGKSVILVVVDRLTKAAHFIALAHPYTASSVAQSFLDNIFKLHGMPRSIVSDRDAVF 2142
Query: 1067 ISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWLPIAE 888
+S+FWK+ F+ G L++S+AYHPQ DGQT VN VE YLRCM S RP W WLP+AE
Sbjct: 2143 LSDFWKELFSLQGVALNMSSAYHPQSDGQTEVVNRCVETYLRCMCSDRPHLWSKWLPLAE 2202
Query: 887 WWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAMSDLLKYALVE 708
+W+N+ YHTS++ TPFE +YG PP + + + LQ R+ M +LK+ L
Sbjct: 2203 FWYNTNYHTSIQTTPFEAVYGQAPPIHLPYLPGESKVAVVAKCLQDREDMLLMLKFHLFR 2262
Query: 707 AQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFWGPIQVLEKIGS 528
AQHRM+Q A++ R +RSF +GD V+++L PYRQ SV LR N KLA ++GP ++++K G
Sbjct: 2263 AQHRMQQFADQHRTDRSFDIGDYVFVKLQPYRQKSVVLRSNQKLAPKYFGPYKIIDKCGV 2322
Query: 527 V 525
V
Sbjct: 2323 V 2323
Score = 88.2 bits (217), Expect(4) = 0.0
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Frame = -1
Query: 3349 WQMQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQGHNE 3170
W Q + F+ D V+ LGGCDMVLGV +++ P+ + F +LT + L G E
Sbjct: 1379 WNFQHNSFEADFMVIPLGGCDMVLGVQWLEQWGPITWDFQQLTMKFKRNDKYVLLHGLKE 1438
Query: 3169 SAQISMMS----------ASVAHNVFKKNKHGMIGRLYSISANXXXXXXXPQITELLQSY 3020
+ +M + +A + + L S+ A P++T LL+ +
Sbjct: 1439 GSVRAMKAQKLNLYRDEEVQLAMMCVHSEEQQSLPTLCSVEAVPDAVVEYPEVTALLEEF 1498
Query: 3019 TSVFSEPTSLPPSRA-HDHHIPLKPLSVPPNQRPYKIPYIQK 2897
+F EPTSLPP R H+H IPL S P NQRPY+ QK
Sbjct: 1499 VDIFEEPTSLPPFRQHHNHKIPLLEGSNPVNQRPYRYAVQQK 1540
Score = 77.8 bits (190), Expect(4) = 0.0
Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 2/171 (1%)
Frame = -3
Query: 3848 NPIQHYKPVTPTTSHANSTLPPIKKLSYTDMRACREKGLCYNCDEVYTTGH--KCTRQ*L 3675
+P + ++P + P+KKLS +M R GLCY CDE YT GH K R L
Sbjct: 1213 HPKKPFQPAWSQSKPEKGDNLPLKKLSQEEMSKRRAAGLCYFCDEKYTPGHFQKHKRTQL 1272
Query: 3674 FMLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHALAGHISHSTIESHGVIKKKPITI 3495
FML+ ++A+ G + T+ GV K+ + +
Sbjct: 1273 FMLE---PEEEEELADEKELMDGVEEECDCAQISVNAVTGVSGYRTMRVKGVSGKRSLFV 1329
Query: 3494 LIDSGSTHNFLDPEVAKLCGCVMEPTTPLQVAVANGHKLLSQARCPSLMAN 3342
LIDSGSTHNF+D +A G + P VAVA G KL A+ N
Sbjct: 1330 LIDSGSTHNFIDKNIASKLGYTLFPPGQSSVAVAGGGKLEVSAKIQKFQWN 1380
Score = 37.7 bits (86), Expect(4) = 0.0
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = -2
Query: 429 TSLPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAHSTPDEATWEDTLTIHHQFP 250
T LP T + LK P +L + + + + +VL++W ++ DEATWE I +FP
Sbjct: 2332 TELPVTMSDVFLK-EPESILERMMVKRQGRAATKVLIKWKNAPIDEATWEFLFDITRKFP 2390
>gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1619
Score = 737 bits (1902), Expect(4) = 0.0
Identities = 371/809 (45%), Positives = 523/809 (64%), Gaps = 2/809 (0%)
Frame = -3
Query: 2873 EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIH 2694
EML G+IQ + +PF+SP+LLVKKKDGSW FCVDYR LNA+T+K+K P+P+I+ELLDE+
Sbjct: 682 EMLQNGIIQHNTSPFASPVLLVKKKDGSWHFCVDYRHLNAITVKNKCPLPIIDELLDELS 741
Query: 2693 GAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVF 2514
GA++FTK+DL+A YHQIR+ D HKTAF+TH GHFEF V+PFGLT+APA+FQ +MN +
Sbjct: 742 GAQWFTKLDLRAVYHQIRMKVEDEHKTAFRTHHGHFEFRVLPFGLTSAPATFQGIMNSIL 801
Query: 2513 QPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGH 2334
L + S L+ + L K SKCSF + + YLGH
Sbjct: 802 STLLRRCVLVFVDDILIYSRTLEDHIHHLRAVFQILNKHGLKVKQSKCSFAQQKLSYLGH 861
Query: 2333 IINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKN 2154
I V+ + KI + WPTP ++K LR FLGL GYYRKF++++G+ISKPLT LL+K
Sbjct: 862 SIGPNGVATETDKIAAVRDWPTPQSVKELRSFLGLAGYYRKFVKNFGIISKPLTNLLRKG 921
Query: 2153 K-FQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYF 1977
+ F S + F L +FS PF +ETDA D G+GAVLMQ P+A+
Sbjct: 922 QLFAWTSMTNEAFLTLKHTLVSAPVLALPDFSIPFVVETDASDKGIGAVLMQRNHPVAFL 981
Query: 1976 NKGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQ 1797
+K +G R LSTYEKE + +++ + WRPYL +F+I TDH+SL + EQ+L + Q
Sbjct: 982 SKALGPRHLGLSTYEKESLAIMLAIDHWRPYLQHAEFSIRTDHRSLAFLDEQRLTTPWQH 1041
Query: 1796 KWLSKLLGYDYEVSYKKGTDNRVADALSRV-QLTTASCTAISQLQLTWIQEVIQSYSSDT 1620
K L+KLLG Y++ YKKG++N ADALSR T +A+S W QEVI+ Y+ D+
Sbjct: 1042 KALTKLLGLQYKILYKKGSENSAADALSRYPDKETVVLSALSVCIPEWTQEVIEGYAQDS 1101
Query: 1619 LALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQ 1440
+L + L IN +A+P +TL+ G+L + +++IG ++ ++LA +H++++ GHSG
Sbjct: 1102 DSLSKVQTLCINNSAIPDFTLKNGLLYFKDKMWIGNNPIVQRKILANLHTAAIGGHSGIT 1161
Query: 1439 ASYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDF 1260
+YQ+ K F W+GL+ + ++I+ C QQ K + P+Q+W +S+DF
Sbjct: 1162 MTYQRIKQLFAWIGLRSDVVKFIQHCTICQQAKGEHVKYPGMLQPLPVPEQSWQIVSLDF 1221
Query: 1259 ITRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDR 1080
I LP+S ILVVVD+F+KY+HF+ L+HPFT VA+ ++ +I++LHGLP +I+SD+
Sbjct: 1222 IEGLPRSSTFNCILVVVDKFSKYAHFVALAHPFTTLEVAEAYMQHIHRLHGLPEAIISDQ 1281
Query: 1079 DNIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWL 900
D IF SN W F GT L +S++YHPQ D QT R+N ++ +LRC PS+W WL
Sbjct: 1282 DRIFTSNLWTTLFRLAGTQLRMSSSYHPQSDRQTERMNQCLKTFLRCFVHASPSQWSRWL 1341
Query: 899 PIAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAMSDLLKY 720
+AE+W+N+++H+SL TPFE LYG+ P FG++ S A S ++L +R M L++
Sbjct: 1342 ALAEYWYNTSFHSSLGTTPFEVLYGHKPRYFGLTASAACSAPELSDWLHERDKMQTLIRE 1401
Query: 719 ALVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFWGPIQVLE 540
L+ AQ RMK QA+ K ERSF VGD VY++L P+ Q SV N KL+ F+GP QVL
Sbjct: 1402 HLLRAQMRMKHQADTKHSERSFAVGDWVYMKLQPFVQQSVVTCTNRKLSFRFYGPFQVLA 1461
Query: 539 KIGSVAYKLQLPPNSKIHPVFHVSQLSSS 453
K+GSVAY+L LPP+ IHPV HVSQL+ +
Sbjct: 1462 KVGSVAYRLDLPPSCLIHPVIHVSQLNKA 1490
Score = 94.0 bits (232), Expect(4) = 0.0
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
Frame = -1
Query: 3349 WQMQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQG-HN 3173
WQ+Q H+FQ +RVL + DM+LG+D + + SP+ ++ T +L+ +G +TLQG H+
Sbjct: 533 WQVQGHKFQTTLRVLPITSYDMILGMDWLMKHSPMSVDWSLKTITLSLQGTTVTLQGVHS 592
Query: 3172 ESAQISMMSASVAHNVFKKNKHGMIGRLYSISANXXXXXXXPQITELLQSYTSVFSEPTS 2993
E A ++SA+ ++ + +L SI+ + + EL+Q +T+VF+EP
Sbjct: 593 ELAHCKILSANEMQQFQQRKAVAHMVQLCSITDDVEPETIPVPVQELMQEFTTVFAEPKG 652
Query: 2992 LPPSRAHDHHIPLKPLSVPPN 2930
LPP+R DH IPL P + P N
Sbjct: 653 LPPTRPFDHSIPLLPGAQPIN 673
Score = 40.8 bits (94), Expect(4) = 0.0
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = -2
Query: 429 TSLPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAHSTPDEA--TWEDTLTIHHQ 256
+ LP D ++ P QV+ +R++ K + + QVL++W S PD A TWE+ + +
Sbjct: 1499 SKLPILDDADAVTPVPQQVIDRRSVHKGAKMVEQVLIRW--SGPDSAVVTWENLQELQQR 1556
Query: 255 FPK 247
FP+
Sbjct: 1557 FPQ 1559
Score = 39.3 bits (90), Expect(4) = 0.0
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 7/138 (5%)
Frame = -3
Query: 3746 REKGLCYNCDEVYTTGHKCTR-------Q*LFMLDAXXXXXXXXXXXXXXXXXXXXXXXX 3588
R +GLCY C E ++ HKC Q L L
Sbjct: 397 RAQGLCYVCAEKWSPNHKCASSVQLNVVQELLCL----FLEEDSHVESENAGQNGSLTRE 452
Query: 3587 XXXXXLHALAGHISHSTIESHGVIKKKPITILIDSGSTHNFLDPEVAKLCGCVMEPTTPL 3408
L A+ G T+ G ++ K + +L+DSGS+ +F+ ++A+ + + L
Sbjct: 453 LMAISLQAVQGTEPDGTMRMLGQLQGKELLVLVDSGSSVSFISSQIAEGLTGIQPLSRRL 512
Query: 3407 QVAVANGHKLLSQARCPS 3354
V VANG L A P+
Sbjct: 513 SVRVANGETLCCGAIIPN 530
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 795 bits (2053), Expect(2) = 0.0
Identities = 395/792 (49%), Positives = 526/792 (66%)
Frame = -3
Query: 2837 NPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIHGAKFFTKIDLKA 2658
+P+SSP +LVKKKDG+WR CVDYR+LNA TIK+K+PIP+IE+LLDE+ GA+ F+KIDL++
Sbjct: 2 SPYSSPAILVKKKDGTWRLCVDYRQLNASTIKNKYPIPVIEDLLDELQGAQIFSKIDLRS 61
Query: 2657 GYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVFQPYLIKXXXXXX 2478
GYHQIR+ AD HKTAF TH GHFE+LVMPFGLTNAPA+FQ LMN + PYL K
Sbjct: 62 GYHQIRMHAADVHKTAFSTHLGHFEYLVMPFGLTNAPATFQALMNKILAPYLRKFVLVFF 121
Query: 2477 XXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGHIINGKEVSVDPQ 2298
S + LFAK SKC FG+ +EYLG+II+ V+ DP
Sbjct: 122 DDILIYSKSATEHAQHLSLVLQLLRHHQLFAKPSKCVFGQDQVEYLGYIISSSGVATDPV 181
Query: 2297 KIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKNKFQCNSASQTTF 2118
K++ + WPTPT++ LR FLGL GYYR+FI+++G+I +P+ + LKKN F Q F
Sbjct: 182 KVQAVQNWPTPTSITELRGFLGLAGYYRRFIKNFGIICRPMFDALKKNNFHWQEVQQQAF 241
Query: 2117 DQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYFNKGMGVRFAALST 1938
D + +FS PF +E DA +G+GAVLMQ RP+AY +K +G + AALST
Sbjct: 242 DAIKLQLAQAPVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSKAIGPKAAALST 301
Query: 1937 YEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQKWLSKLLGYDYEV 1758
Y+KE + ++ + KW+ Y LGT I TD SLKY EQ++ VQ K L KLL YDY++
Sbjct: 302 YDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKLLSYDYKI 361
Query: 1757 SYKKGTDNRVADALSRVQLTTASCTAISQLQLTWIQEVIQSYSSDTLALDLIPKLLINPT 1578
YKKG +N+ ADALSR+Q A T + Q WI EV SYS+D +L L I P
Sbjct: 362 EYKKGQENKAADALSRMQQLNALTTTVIVPQ--WITEVAASYSTDPKCHELESHLHIAPQ 419
Query: 1577 AVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQASYQKSKLYFYWVG 1398
+ P YTL+ G+L+Y I +G LR Q+L + H S++ GHSG +A+YQ+ K FYW G
Sbjct: 420 SHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPG 479
Query: 1397 LKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDFITRLPKSEGREVIL 1218
+K + Q++K C Q++K+ ++ P+ AW HI+MDF+ LPKSEG++VI
Sbjct: 480 MKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIW 539
Query: 1217 VVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDRDNIFISNFWKDFFN 1038
V+VDRFTKY+HF+PLSHPFTA + FL++ YKLHGLP+ IVSDRD IF S+ WK+ F
Sbjct: 540 VIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFE 599
Query: 1037 KMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWLPIAEWWFNSTYHTS 858
K G LH S+AYHPQ DGQ+ RVN +ENYLRCMTS +P KW LP AEWW+N+T+HTS
Sbjct: 600 KAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTS 659
Query: 857 LKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAMSDLLKYALVEAQHRMKQQAN 678
L ++P++ L+G PP + P + + A+ + +K LV+AQ RMK A+
Sbjct: 660 LGMSPYQALHGIKPPLLAELLLPGSLLEGERNKQEAKAALLETIKSHLVKAQARMKYFAD 719
Query: 677 KKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFWGPIQVLEKIGSVAYKLQLPPN 498
+ R ER+ +VGD+VYL++ PYR S+ L +LKL + ++GP +VLE+IGSVAYKL LP
Sbjct: 720 QHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVT 779
Query: 497 SKIHPVFHVSQL 462
S+IH VFHVSQL
Sbjct: 780 SQIHHVFHVSQL 791
Score = 55.1 bits (131), Expect(2) = 0.0
Identities = 28/77 (36%), Positives = 39/77 (50%)
Frame = -2
Query: 480 FSCLSIKLKLGAGILP*TSLPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAHST 301
F +K LG+ +P LP D E + TPL VL +R + +N +P+ Q + WA+
Sbjct: 786 FHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLP 845
Query: 300 PDEATWEDTLTIHHQFP 250
ATWED I FP
Sbjct: 846 ESAATWEDAAFITKVFP 862
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 785 bits (2027), Expect(2) = 0.0
Identities = 383/815 (46%), Positives = 540/815 (66%)
Frame = -3
Query: 2906 YPKNSS*KTM*EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPI 2727
Y K + K + E++ + IQ S P+SSP ++V+KKDGSWR CVDYR+LNA T+K+KFP+
Sbjct: 698 YQKEAMEKIIAELIESKEIQVSDIPYSSPAVMVRKKDGSWRLCVDYRQLNAQTVKNKFPM 757
Query: 2726 PLIEELLDEIHGAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAP 2547
P+IE+LLDE++GAK F+K+DL++GYHQIR+ D KTAF+TH GH+E+ VMPFGLTNAP
Sbjct: 758 PIIEDLLDELNGAKVFSKLDLRSGYHQIRMATQDIPKTAFRTHLGHYEYQVMPFGLTNAP 817
Query: 2546 ASFQTLMNDVFQPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCS 2367
+FQ+LMN V P+L K S D + L KL KC+
Sbjct: 818 TTFQSLMNQVLAPFLRKYVLVFFDDILIYSKDWAEHKEHIRQVMKVLEENKLVVKLKKCA 877
Query: 2366 FGKT*IEYLGHIINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLI 2187
FG + YLGHII+ V+ DP+K+E + +PTP ++ LR+FLG+TGYYR+FI++YG++
Sbjct: 878 FGLPSVTYLGHIISQDGVATDPKKVEKIATYPTPKSVTDLRKFLGMTGYYRRFIKNYGIV 937
Query: 2186 SKPLTELLKKNKFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVL 2007
+PL ++LKK FQ F+ L +F+K F IE DAC NG+GAVL
Sbjct: 938 CRPLHDMLKKEGFQWEREQTEAFETLKTHMCTSPVLSLPDFTKEFVIEADACGNGIGAVL 997
Query: 2006 MQTRRPIAYFNKGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFM 1827
MQ+ RP+AYF+K +G + AA S YEKE M ++ + KWR Y+LG++ I TD QSLK+ M
Sbjct: 998 MQSGRPLAYFSKTLGPKAAAQSIYEKEAMAILEALKKWRHYVLGSRLIIKTDQQSLKFMM 1057
Query: 1826 EQKLHSFVQQKWLSKLLGYDYEVSYKKGTDNRVADALSRVQLTTASCTAISQLQLTWIQE 1647
Q+L +Q K L KL+ YDY + YK G +N VADALSR+ C AI+ + W+++
Sbjct: 1058 NQRLVEGIQHKLLLKLMEYDYSIEYKAGKENLVADALSRIP-PAEQCQAITTVIPEWVRD 1116
Query: 1646 VIQSYSSDTLALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSS 1467
+ +SY D A ++ + Y+ E G+L+Y GRIY+G ++R +++ + HSS
Sbjct: 1117 IQRSYEGDVQAHKILSLIGTEGDTDGSYSQEAGLLRYKGRIYVGENTEIREELIRSYHSS 1176
Query: 1466 SVRGHSGTQASYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQ 1287
+ GHSG +A+Y + K FYW GLK+ + +I+EC Q K+ + PD
Sbjct: 1177 AFGGHSGMRATYHRIKSLFYWPGLKKAVEGFIRECPICQVTKAEHIHIPGLLDPLEVPDM 1236
Query: 1286 AWHHISMDFITRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHG 1107
AW HI+MDF+ LPKS G++VILVVVDR TKY+HF+ ++HP+T V +LF++NI++LHG
Sbjct: 1237 AWAHITMDFVEGLPKSNGKDVILVVVDRLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHG 1296
Query: 1106 LPSSIVSDRDNIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSY 927
+P +I++DRD IF S +++ F M L ST+YHPQ DGQT RVN +E+YLR MT
Sbjct: 1297 MPMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSMTFQ 1356
Query: 926 RPSKWVTWLPIAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKR 747
P++W +WL +AEWW+N+TYHTS+++TPF+ LYGYPPPQ P + A ++++
Sbjct: 1357 EPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARVTIEQK 1416
Query: 746 QAMSDLLKYALVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAI 567
A+ LKY+L EAQ R+K A++ R ER+ VGD+VYL+L PYRQT+ +R +LKL +
Sbjct: 1417 DAIIQKLKYSLTEAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSK 1476
Query: 566 FWGPIQVLEKIGSVAYKLQLPPNSKIHPVFHVSQL 462
F+GP +++EK+G VAYKLQLP S IHPVFHVSQL
Sbjct: 1477 FYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQL 1511
Score = 57.0 bits (136), Expect(2) = 0.0
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = -2
Query: 486 PCFSCLSIKLKLGAGILP*TSLPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAH 307
P F +K +G+ +P +LPS + +K P+ VL +R + + + Q LV W +
Sbjct: 1504 PVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHN 1563
Query: 306 STPDEATWEDTLTIHHQFP 250
+P EATWED I FP
Sbjct: 1564 LSPSEATWEDASMIQSMFP 1582
Score = 82.8 bits (203), Expect(2) = 2e-17
Identities = 44/163 (26%), Positives = 75/163 (46%)
Frame = -1
Query: 3367 QDAHLSWQMQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNIT 3188
Q L +Q+Q F ++ L G D++LG D + + SP+ K +T +
Sbjct: 544 QVPELVYQIQGETFSNKFNIIPLKGYDVILGADWIYKYSPITLDLKKRELGITKGEKTVV 603
Query: 3187 LQGHNESAQISMMSASVAHNVFKKNKHGMIGRLYSISANXXXXXXXPQITELLQSYTSVF 3008
+Q + + + + +K G + ++ + I E+LQ + +V
Sbjct: 604 IQDFTRPGKHLWVDSKKVDQILRKGGLGCLFQITRVKEEETSHEIPEDIKEILQEFPAVL 663
Query: 3007 SEPTSLPPSRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKL 2879
+P LPP R DH I LK + PPN RPY++P+ QK +EK+
Sbjct: 664 KDPKGLPPRRNCDHVITLKSGAEPPNLRPYRVPHYQKEAMEKI 706
Score = 37.4 bits (85), Expect(2) = 2e-17
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 3494 LIDSGSTHNFLDPEVAKLCGCVMEPTTPLQVAVANGHKLLSQARCPSLM 3348
L+DSGST F+D + A C + T +V VA G +L S+ + P L+
Sbjct: 501 LVDSGSTSTFMDQDYAVRNHCPLVSTDAKKVVVAGGGELKSEVQVPELV 549
>gb|AAP54937.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1477
Score = 731 bits (1887), Expect(3) = 0.0
Identities = 378/805 (46%), Positives = 503/805 (62%), Gaps = 1/805 (0%)
Frame = -3
Query: 2873 EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIH 2694
EML +GVIQPS + +SSP LLV+KKDG+WR CVDYR LNALT+K K+P+P+IEELLDE+
Sbjct: 646 EMLDSGVIQPSQSAWSSPALLVRKKDGTWRLCVDYRHLNALTVKSKYPVPIIEELLDELS 705
Query: 2693 GAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVF 2514
G+K+FTK+DL+AGYHQIR+ P + HKTAF+TH GH+E+ VM FGL APASFQ MND
Sbjct: 706 GSKWFTKLDLRAGYHQIRMKPGEEHKTAFQTHLGHYEYKVMSFGLIGAPASFQGAMNDTL 765
Query: 2513 QPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGH 2334
L K S DLQS+ K+SKCSF + + YLGH
Sbjct: 766 SSVLRKCALVFFDDILIYSPDLQSHCQHLTQVLQLLRRDHWQVKISKCSFAQQQVSYLGH 825
Query: 2333 IINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKN 2154
+I VS +P+KI + W PTT+K LR FLGL GYYRKF++ + S
Sbjct: 826 VIGVHGVSTEPRKILDVQNWAVPTTVKKLRGFLGLAGYYRKFVKDFDQASS--------- 876
Query: 2153 KFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYFN 1974
C+ S T F+ PF +ETDA D G+GAVL Q PIAY +
Sbjct: 877 -HYCSCLSITNFNF------------------PFIVETDASDGGIGAVLSQEGHPIAYLS 917
Query: 1973 KGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQK 1794
K +G R LSTYEKE M +++ V WR YL +F I TDH SL + +Q+LH+ QQK
Sbjct: 918 KALGPRSKGLSTYEKECMAILLAVEHWRSYLQHQEFMILTDHHSLTHLSDQRLHTPWQQK 977
Query: 1793 WLSKLLGYDYEVSYKKGTDNRVADALSRVQL-TTASCTAISQLQLTWIQEVIQSYSSDTL 1617
+KLLG Y + Y+KG+ N ADALSR L +A A+S +W+QEVIQ Y D
Sbjct: 978 AFTKLLGLQYRIVYRKGSANSAADALSRKDLGDSAQILAVSSCSPSWLQEVIQGYEQDKF 1037
Query: 1616 ALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQA 1437
+ L+ +L +NP A YTL+QG+++Y GRI++G DL+ +++ +H + GHSG
Sbjct: 1038 SSQLLAELSLNPKAREHYTLQQGLIRYKGRIWVGNNTDLQLKLIKELHDNPAGGHSGFPV 1097
Query: 1436 SYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDFI 1257
+Y++ K F W+G+K+ + Q +K+C QQ K P AW ISMDFI
Sbjct: 1098 TYRRIKHLFAWLGMKQQIQQQLKQCQICQQAKPERVKYPGLLQPLPVPKGAWQVISMDFI 1157
Query: 1256 TRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDRD 1077
LP S+ ILVVVD+F+KY+HFLPL+HPFTA SVA +F+ N+YKLHG+P I+SDRD
Sbjct: 1158 EGLPTSDKYNCILVVVDKFSKYAHFLPLTHPFTAFSVATVFMKNVYKLHGMPQVIISDRD 1217
Query: 1076 NIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWLP 897
+F S W+ F K GT LH+S++YHPQ DGQT RVN +E +LRC P+KW WL
Sbjct: 1218 RVFTSQLWEHLFTKSGTKLHMSSSYHPQTDGQTERVNRCLEIFLRCFIHVTPTKWANWLY 1277
Query: 896 IAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAMSDLLKYA 717
+AE+W+N++YH+S+ TPFE +Y Y P FGIS+ + +L+ R ++ L++
Sbjct: 1278 LAEFWYNTSYHSSVHKTPFEVIYRYQPTHFGISMHDC-EIPDLDLWLKDRDLINQLIQQH 1336
Query: 716 LVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFWGPIQVLEK 537
L +A+ +MK A+K R R FQ GD VYL+L PY Q+SV R N KL+ ++GP QVL++
Sbjct: 1337 LHQAEQQMKAYADKNRTFREFQEGDWVYLKLQPYVQSSVARRANHKLSFKYFGPFQVLQR 1396
Query: 536 IGSVAYKLQLPPNSKIHPVFHVSQL 462
+G VAYKL LPP+ IH V HVSQL
Sbjct: 1397 VGLVAYKLALPPSCHIHLVIHVSQL 1421
Score = 74.3 bits (181), Expect(3) = 0.0
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = -1
Query: 3352 SWQMQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQGHN 3173
SW Q H F D +++ LGG D++LG+D +++ SP+K Y+ + + + G +
Sbjct: 486 SWWTQGHNFSNDFKLIPLGGYDIILGMDWLEQYSPMKIYWVNKWVEFQYQNQWLRVLGIS 545
Query: 3172 ESAQISMMSASVAHNVFKKNKHGMIGRLYSIS--ANXXXXXXXPQITELLQSYTSVFSEP 2999
S S SV + K G I + I+ N I ++L Y VF EP
Sbjct: 546 SSTT-SYAEISV-EQLMSLAKMGSIMYMVKITDHQNTEEQSYPDSIKQILLEYHDVFDEP 603
Query: 2998 TSLPPSRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKLCRKCYPQGL 2852
+ LPP R DH IPL + P + RPYK K +E+ ++ G+
Sbjct: 604 SELPPERYCDHQIPLIEGAKPVSLRPYKYNPELKDEIERQVKEMLDSGV 652
Score = 53.1 bits (126), Expect(3) = 0.0
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 2/133 (1%)
Frame = -3
Query: 3746 REKGLCYNCDEVYTTGHKCTR--Q*LFMLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3573
R KGLC+ C E + HKC Q + +
Sbjct: 352 RSKGLCFTCGERWGRDHKCATAVQLHVVQELLEVLQGDSGEDSPTESSPEREDIIVMAIS 411
Query: 3572 LHALAGHISHSTIESHGVIKKKPITILIDSGSTHNFLDPEVAKLCGCVMEPTTPLQVAVA 3393
AL G S ++I G I+ + +LIDSGS+H+F+D ++ K V T PL+V +A
Sbjct: 412 QQALNGTESRNSIRLRGWIQGTELLMLIDSGSSHSFIDEKIGKSMSGVKLLTKPLKVQIA 471
Query: 3392 NGHKLLSQARCPS 3354
+G +L+ P+
Sbjct: 472 DGGELVCSQVIPN 484
>ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648418 [Zea mays]
Length = 1853
Score = 780 bits (2015), Expect(2) = 0.0
Identities = 388/804 (48%), Positives = 538/804 (66%)
Frame = -3
Query: 2873 EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIH 2694
++L +G+I PS +PF+SP+LLV+KKDG+WRFCVDYRKLN +TIK++FP+P++EE+LDE+
Sbjct: 727 DLLKSGLITPSVSPFASPVLLVQKKDGTWRFCVDYRKLNDMTIKNRFPMPVVEEILDELA 786
Query: 2693 GAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVF 2514
G + F+ +D+ +GYHQIR+ ++ KTAFKTH+GH++F VMPFGLTNAPA+FQ MN V
Sbjct: 787 GTEIFSSLDMTSGYHQIRMGVSEEFKTAFKTHQGHYQFRVMPFGLTNAPATFQCAMNLVL 846
Query: 2513 QPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGH 2334
P+L K S + QS+ + K KC FG+ + YLGH
Sbjct: 847 APFLRKFVMVFIDDILVYSPNWQSHLEHLRLVFTALRHHKFYLKERKCVFGQKELSYLGH 906
Query: 2333 IINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKN 2154
II+G V+ DP+K + MLKWP P + LR FLGLTGYYR+F+Q YG I++PLT LL+K
Sbjct: 907 IISGNGVATDPKKTDAMLKWPKPLNVTDLRGFLGLTGYYRRFVQGYGAIARPLTRLLQKG 966
Query: 2153 KFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYFN 1974
FQ S ++ F + L +F+ PF +ETDACD+GVGAVLMQ RPIA+ +
Sbjct: 967 AFQWTSEAEMAFQRLKQAMVSTPVLALPDFNIPFVVETDACDDGVGAVLMQRGRPIAFLS 1026
Query: 1973 KGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQK 1794
K +G++ LS YEKE + ++M V WR YL ++F I TDH++L + Q LHS +Q+K
Sbjct: 1027 KALGIKSQKLSIYEKEFIALIMAVDHWRHYLQRSEFEIRTDHKALSFLGSQDLHSELQRK 1086
Query: 1793 WLSKLLGYDYEVSYKKGTDNRVADALSRVQLTTASCTAISQLQLTWIQEVIQSYSSDTLA 1614
++KL+G ++V YK+G DN+VADALSRV A TA+S++Q WIQEV SY +D A
Sbjct: 1087 AMAKLMGLQFKVVYKQGKDNKVADALSRVGAVMA-LTAVSEVQPLWIQEVTNSYVTDPAA 1145
Query: 1613 LDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQAS 1434
L+ +L ++ Y+L QGV++ G I++G LRT+++AA+H S+ GHSG A+
Sbjct: 1146 QSLLARLCVHNPDEHGYSLSQGVIRKGGLIWVGQNSALRTKLVAAVHDSAAGGHSGMHAT 1205
Query: 1433 YQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDFIT 1254
Y + K F W G+K + ++++C QQ K P AW I+MDFI
Sbjct: 1206 YHRLKKLFVWKGMKSDVADFVQQCQICQQAKGERVHPAGLLHPLPIPQGAWQDITMDFIE 1265
Query: 1253 RLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDRDN 1074
+LP+S G + ILVVVDRFTKY+HF+ L HPFTAS VA++ LD + +LHGLP SIVSDRD
Sbjct: 1266 KLPQSGGCDTILVVVDRFTKYAHFIALKHPFTASQVAQVILDQVVRLHGLPKSIVSDRDK 1325
Query: 1073 IFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWLPI 894
IF S FW F +GT L+LSTAYHPQ DGQ+ RVN VE YLRC +P+KW TWL +
Sbjct: 1326 IFTSAFWTQLFKILGTKLNLSTAYHPQTDGQSERVNQCVEMYLRCAVHAQPTKWKTWLSL 1385
Query: 893 AEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAMSDLLKYAL 714
AE+W+N++YHTSL +PF+ LYGY PP P+ + + + L +R + +L+ L
Sbjct: 1386 AEFWYNTSYHTSLACSPFKVLYGYDPPFAAAPSVPSDTAADVAQVLVERAQFTAMLREQL 1445
Query: 713 VEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFWGPIQVLEKI 534
AQ+RMK +A++ R +R FQVGD+V L+L PY Q SV R KLA F+GP +++E++
Sbjct: 1446 AAAQNRMKLRADRLRTDRQFQVGDMVLLKLQPYAQHSVVSRPCPKLAFKFFGPYKIVERV 1505
Query: 533 GSVAYKLQLPPNSKIHPVFHVSQL 462
G+VAY+L+LP ++++HPVFHVSQL
Sbjct: 1506 GAVAYRLELPASAQVHPVFHVSQL 1529
Score = 51.2 bits (121), Expect(2) = 0.0
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = -2
Query: 429 TSLPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAHSTPDEATWEDTLTIHHQFP 250
++LP+ SS V PL++L +R + K + +PQVL++W+ D TWED + ++P
Sbjct: 1541 SNLPAYSDLSSRNVQPLEILDRRLVKKGNRAVPQVLIRWSLLPDDATTWEDYNVLRQRYP 1600
Query: 249 KLI 241
I
Sbjct: 1601 NAI 1603
Score = 89.7 bits (221), Expect(2) = 3e-21
Identities = 54/176 (30%), Positives = 79/176 (44%)
Frame = -1
Query: 3355 LSWQMQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQGH 3176
L W H +Q D+RVL LG D +LG D ++ SP+ ++ S KG + L G+
Sbjct: 566 LEWWANGHTYQNDMRVLGLGAYDAILGYDWLRRHSPMHCDWDAQVISFVDKGIEVQLVGN 625
Query: 3175 NESAQISMMSASVAHNVFKKNKHGMIGRLYSISANXXXXXXXPQITELLQSYTSVFSEPT 2996
+ Q+ +S+ + + + L + LL + +F PT
Sbjct: 626 HPKQQVVQEVSSLQVERWLRGNDIWVFALLEEVTAASSNEIHTDLQGLLGEFMDIFEAPT 685
Query: 2995 SLPPSRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKLCRKCYPQGLYNLATTLF 2828
LPPSR DHHIPL P S+P N RPYK KT +E+ GL + + F
Sbjct: 686 VLPPSRPFDHHIPLLPGSIPVNARPYKYSPHHKTEIERQVADLLKSGLITPSVSPF 741
Score = 43.5 bits (101), Expect(2) = 3e-21
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 5/137 (3%)
Frame = -3
Query: 3746 REKGLCYNCDEVYTTGH-----KCTRQ*LFMLDAXXXXXXXXXXXXXXXXXXXXXXXXXX 3582
++ GLCY C + + GH K + L L A
Sbjct: 430 KQNGLCYTCADKFEPGHQARCPKRVQMQLSALTAEELGMTLSEQTLTQIELEEKGEEENF 489
Query: 3581 XXXLHALAGHISHSTIESHGVIKKKPITILIDSGSTHNFLDPEVAKLCGCVMEPTTPLQV 3402
L+AL+G + + +++ + + +L+DSGS+ +F++ ++ G + P +V
Sbjct: 490 RLSLNALSGTTNEECMAVCALLQNQVMLVLVDSGSSTSFINKQLVDRIGLTVHPCASCKV 549
Query: 3401 AVANGHKLLSQARCPSL 3351
VANG + S SL
Sbjct: 550 RVANGEIMYSDTMVRSL 566
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 773 bits (1995), Expect(2) = 0.0
Identities = 385/820 (46%), Positives = 541/820 (65%), Gaps = 5/820 (0%)
Frame = -3
Query: 2906 YPKNSS*KTM*EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPI 2727
Y K + + E++ + IQ S +P+SSP ++V+KKDGSWR CVDYR+LNA T+K+KFP+
Sbjct: 583 YQKEAMENIINELIESKEIQTSDSPYSSPAVMVRKKDGSWRMCVDYRQLNAQTVKNKFPM 642
Query: 2726 PLIEELLDEIHGAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAP 2547
P+IE+LLDE++GA+ F+K+DL++GYHQIR+ D HKTAF+TH GH+E+ VMPFGLTN P
Sbjct: 643 PIIEDLLDELNGARIFSKLDLRSGYHQIRMAEKDVHKTAFRTHLGHYEYQVMPFGLTNDP 702
Query: 2546 ASFQTLMNDVFQPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCS 2367
A+FQ+LMN V P+L + S + L KL KC+
Sbjct: 703 ATFQSLMNHVLAPFLRRFVLVFFDDILIYSKTRAEHLEHVKLVMQALQDNHLVIKLKKCA 762
Query: 2366 FGKT*IEYLGHIINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLI 2187
FG + YLGH+I+ V+ DP+K+ + WPTP + +R+FLG+TGYYR+FIQ YG I
Sbjct: 763 FGLASVSYLGHVISQDGVATDPKKVGKIKNWPTPKDVTDVRKFLGMTGYYRRFIQGYGTI 822
Query: 2186 SKPLTELLKKNKFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVL 2007
+P+ ++LKKN FQ + T F+ L +F + F IE DAC G+GAVL
Sbjct: 823 CRPIHDMLKKNGFQWGADQTTAFETLKHKLRTSPVLALPDFDQAFTIEADACGVGIGAVL 882
Query: 2006 MQTRRPIAYFNKGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFM 1827
MQ RPIA+F+K +G + A S YEKE M ++ + KWR Y+LG+K I TD QSLK+ M
Sbjct: 883 MQGGRPIAFFSKALGPKAAGQSIYEKEAMAILEALKKWRHYVLGSKLIIKTDQQSLKFMM 942
Query: 1826 EQKLHSFVQQKWLSKLLGYDYEVSYKKGTDNRVADALSRVQLTTA---SCTAISQLQLTW 1656
Q+L +Q K L KL+ YDY + YK G +N VADALSR+ A C ++ + W
Sbjct: 943 GQRLVEGIQHKLLLKLMEYDYTIEYKSGKENLVADALSRLPQKEAVADRCHPMTVVIPEW 1002
Query: 1655 IQEVIQSYSSDTLALDLIPKLLINPTAVP--LYTLEQGVLKYNGRIYIGFTGDLRTQVLA 1482
I ++ +SY +D A ++ LI A P Y LE G+LKY GRIY+G D+R Q++
Sbjct: 1003 IVDIQRSYENDVQAHKILS--LIGTAADPDREYKLEAGLLKYKGRIYVGEATDIRRQLIT 1060
Query: 1481 AIHSSSVRGHSGTQASYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXX 1302
HSSS GHSG +A++ + K+ FYW G++ + ++I+EC + Q KS +
Sbjct: 1061 TYHSSSFGGHSGMRATHHRIKMLFYWHGMRGEVERFIRECPTCQITKSEHVHIPGLLNPL 1120
Query: 1301 XXPDQAWHHISMDFITRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNI 1122
PD AW HI+MDFI LPKS+G++VILVVVDR TKY+HF+ L+HP+ V + F++NI
Sbjct: 1121 EIPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFIALAHPYDVEQVVEAFMNNI 1180
Query: 1121 YKLHGLPSSIVSDRDNIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLR 942
+KLHG+P I++DRD IF S+ +++ F M L STAYHPQ DGQT RVN +E+YLR
Sbjct: 1181 HKLHGMPMVIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLR 1240
Query: 941 CMTSYRPSKWVTWLPIAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEE 762
MT P KW +WL +AEWW+N+T+HT++++TPF+ +YGY PPQ P + A
Sbjct: 1241 NMTFQEPHKWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSPPQINEFSVPCNISEEARV 1300
Query: 761 YLQKRQAMSDLLKYALVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNL 582
+++++A+ + LK +L +AQHRMK A+K R ER+ +VGD+VYL+L PYRQ++ +R +L
Sbjct: 1301 TIEEKEAILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSL 1360
Query: 581 KLAAIFWGPIQVLEKIGSVAYKLQLPPNSKIHPVFHVSQL 462
KL + F+GP +VL+KIG +AYKLQLP +++IHPVFHVSQL
Sbjct: 1361 KLRSKFYGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQL 1400
Score = 57.8 bits (138), Expect(2) = 0.0
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = -2
Query: 486 PCFSCLSIKLKLGAGILP*TSLPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAH 307
P F +K LG +P ++LPS + +K PL VL +R + + + Q L+ W +
Sbjct: 1393 PVFHVSQLKKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQN 1452
Query: 306 STPDEATWEDTLTIHHQFP 250
+P EATWED I FP
Sbjct: 1453 LSPAEATWEDASVIQAMFP 1471
Score = 79.7 bits (195), Expect(2) = 5e-14
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Frame = -1
Query: 3355 LSWQMQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQGH 3176
+S+++Q F ++L L G D++LG D + SP+ + +T I LQ
Sbjct: 431 ISYEIQGECFTNQFKLLPLKGYDIILGADWIYNYSPISLDLKQRILGITKGNKVILLQDF 490
Query: 3175 NESAQISMMSASVAHNVFKKNKHGMIGRLYSIS--ANXXXXXXXPQITELLQSYTSVFSE 3002
+ + +S + KK GM+ ++ +S I++++Q + +V E
Sbjct: 491 TKPNKHFQISGKRLEKMLKKGALGMVIQVNVMSETVEEEGHVIPEDISDIIQQFPAVLKE 550
Query: 3001 PTSLPPSRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKL 2879
P LPP R DH I L+ +VPPN RPY++P+ QK +E +
Sbjct: 551 PKGLPPKRECDHVINLQSGAVPPNIRPYRVPHYQKEAMENI 591
Score = 29.3 bits (64), Expect(2) = 5e-14
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -3
Query: 3494 LIDSGSTHNFLDPEVAKLCGCVMEPTTPLQVAVANGHKLLSQARCPSL 3351
L+DSGST F+D + A ++ T +V VA G +L + P +
Sbjct: 384 LVDSGSTTTFMDQDYALRNYYPLKNTDTKKVVVAGGGELKTDVMVPDI 431
>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
Length = 1557
Score = 692 bits (1787), Expect(4) = 0.0
Identities = 364/805 (45%), Positives = 485/805 (60%), Gaps = 1/805 (0%)
Frame = -3
Query: 2873 EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIH 2694
EMLS G+IQ S +P++SP++LVKKKDGSWR CVDYR +N TIKDK+PIPL+E+LLDE+
Sbjct: 708 EMLSQGIIQNSSSPYASPVVLVKKKDGSWRLCVDYRGVNKQTIKDKYPIPLLEDLLDELG 767
Query: 2693 GAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVF 2514
G+ +F+K+DL+AG+HQIR+ P D +KTAFKTH GH+E+LVMPFGLTN P +FQ LMN VF
Sbjct: 768 GSTYFSKLDLRAGFHQIRMHPHDVYKTAFKTHAGHYEYLVMPFGLTNVPCTFQGLMNQVF 827
Query: 2513 QPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGH 2334
+ K S + + LF K SKC+FG T +EYLGH
Sbjct: 828 RHIARKYVLVFFDDILVYSPTWEQHLQHLEEVFAVLRKHQLFLKPSKCTFGATVVEYLGH 887
Query: 2333 IINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKN 2154
I+ VS DP KI+ + +WPTP T K LR FLGLT YYR+FIQ Y +I++PLT +LKK+
Sbjct: 888 FISAAGVSTDPSKIKAVEQWPTPITQKQLRSFLGLTNYYRRFIQGYSIIARPLTNMLKKD 947
Query: 2153 KFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYFN 1974
F S + FD L +F K F IETDA ++G+GAVLMQ PI Y +
Sbjct: 948 GFLWCSEAAAAFDALKSALTSSPVLALPDFGKDFVIETDASNSGIGAVLMQDNHPICYIS 1007
Query: 1973 KGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQK 1794
+ +G R ALS YEKELM VV V+ T F Q
Sbjct: 1008 RALGPRHQALSVYEKELMAVVHAVT--------TPF---------------------QHM 1038
Query: 1793 WLSKLLGYDYEVSYKKGTDNRVADALSRVQLTTASCTAISQLQLTWIQEVIQSYSSDTLA 1614
WLSKL+GY YE+ YK+G +N ADALSRV +S + + SD
Sbjct: 1039 WLSKLMGYTYEIQYKQGKENHAADALSRVTGAQLLSITLSHAHEGLFDSIQLLWQSDPHL 1098
Query: 1613 LDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQAS 1434
+I + NP + P Y+ L+ G++ +G ++ +L +H S GHSG A+
Sbjct: 1099 SKVISDIKSNPASHPAYSFVNEELRRKGKLVVGNDAAVKLHILKWMHDSVSGGHSGRDAT 1158
Query: 1433 YQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDFIT 1254
Q+ K FYW + + YI+ C Q++K + P+ W ISMDFI
Sbjct: 1159 LQRIKALFYWSKMSLEVQNYIRNCQICQKNKYDLAASPGLLQPLPVPNGVWECISMDFIE 1218
Query: 1253 RLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDRDN 1074
LP S G+ ILVV+DR +K +HF+ LSHP+TA VA+ +LDN++KLHG+P I SDRD
Sbjct: 1219 GLPPSAGKHCILVVIDRLSKNAHFMALSHPYTAIEVAQAYLDNVFKLHGMPKDITSDRDP 1278
Query: 1073 IFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWLPI 894
F+S W++ F G L STAYHPQ DGQT N +E YLRCMT+ P W WLP+
Sbjct: 1279 TFLSEVWRELFRVHGVDLRFSTAYHPQTDGQTEVTNKTLETYLRCMTADAPQTWSKWLPL 1338
Query: 893 AEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAMSDLLKYAL 714
AEWW+N+T+H+++K TPFE +YG PPP + S+ + LQKR+ + +LK+ L
Sbjct: 1339 AEWWYNTTFHSAIKCTPFEIVYGQPPPVHLPYLPGESSSVVVDRSLQKREELIAMLKFHL 1398
Query: 713 VEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRR-NLKLAAIFWGPIQVLEK 537
+ AQ+RMKQ A+ R +R FQVGD VYL+L PYRQ S++ + KL+ F+GP +V +K
Sbjct: 1399 LRAQNRMKQYADSHRSQREFQVGDFVYLKLQPYRQQSLKTKGVPHKLSPRFYGPFRVTDK 1458
Query: 536 IGSVAYKLQLPPNSKIHPVFHVSQL 462
+G+VAYKL+LP + IH VFHVSQL
Sbjct: 1459 VGTVAYKLELPQGTAIHNVFHVSQL 1483
Score = 76.3 bits (186), Expect(4) = 0.0
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Frame = -1
Query: 3352 SWQMQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQGHN 3173
+W+MQ + F ++R L L D+VLGV + + P+ + F L T G L+G
Sbjct: 535 TWRMQGYSFTTEVRTLPLDHWDIVLGVQWLATLGPILWDFTYLRMEFTLNGAKYILRG-T 593
Query: 3172 ESAQISMMSASVAHNVFKKNKHGMIGRLYS-------------ISANXXXXXXXPQITEL 3032
A ++ + + + + +LY I+ + + L
Sbjct: 594 AKAGCKVIKGNKLNKILSQEPQVAFLQLYDPESATSVGASLSHIAVDESTSLSDATLQAL 653
Query: 3031 LQSYTSVFSEPTSLPPSR-AHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKLCRKCYPQG 2855
L++Y +F EPT LPP R DH IP++ + P + RPY+ IQK +++++ R+ QG
Sbjct: 654 LEAYEDLFIEPTGLPPFRKGFDHQIPVEAGASPVSLRPYRYNSIQKDIIDRMVREMLSQG 713
Query: 2854 L 2852
+
Sbjct: 714 I 714
Score = 68.6 bits (166), Expect(4) = 0.0
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Frame = -3
Query: 3800 NSTLPPIKKLSYTDMRACREKGLCYNCDEVYTTGH--KCTRQ*LFMLDAXXXXXXXXXXX 3627
N+T P +K +Y +M+ R KGLC CDE YT GH K + +F+++
Sbjct: 380 NNTNKPTRKFTYDEMQERRTKGLCMFCDEPYTPGHHLKHRKSQIFVMECEEDDLDDEQEV 439
Query: 3626 XXXXXXXXXXXXXXXXXXL---HALAGHISHSTIESHGVIKKKPITILIDSGSTHNFLDP 3456
+AL G + + + G K + I +D GSTHNF+D
Sbjct: 440 NATVEEEDAVVNPNEEQPTISANALNGSTTFNCMRLMGQYGKHKLHIFVDPGSTHNFIDI 499
Query: 3455 EVAKLCGCVMEPTTPLQVAVANGHKLLSQAR 3363
+VAK C +E T P+ V A G K ++ R
Sbjct: 500 KVAKEINCKLEGTRPMTVDAALGGKTVTLFR 530
Score = 37.4 bits (85), Expect(4) = 0.0
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -2
Query: 384 PLQVLAKRTLMKNRQPIPQVLVQWAHSTPDEATWE---DTLTIHHQF 253
P +L K+ + + Q + +VLVQW P +ATWE D +T H F
Sbjct: 1509 PEAILEKKMVNRQNQAVTKVLVQWKGEPPSKATWEFYKDFITKHPTF 1555
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 765 bits (1975), Expect(2) = 0.0
Identities = 378/819 (46%), Positives = 527/819 (64%), Gaps = 4/819 (0%)
Frame = -3
Query: 2906 YPKNSS*KTM*EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPI 2727
Y K + + +++ + I+ S +P++ P ++V+K+DGSWR CVDYR+LNA T+K+KFP+
Sbjct: 62 YQKEAMENIISDLIQSKEIRFSDSPYACPAIMVRKRDGSWRMCVDYRQLNAQTVKNKFPM 121
Query: 2726 PLIEELLDEIHGAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAP 2547
P+IE+LLDE+HGA+ F+K+DL++GYHQIR+ D KTAFKTH GH+E+ VMPFGLTNAP
Sbjct: 122 PIIEDLLDELHGARIFSKLDLRSGYHQIRMAEEDIPKTAFKTHMGHYEYQVMPFGLTNAP 181
Query: 2546 ASFQTLMNDVFQPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCS 2367
A+FQ+LMN P+L K S + + L +L KC+
Sbjct: 182 ATFQSLMNQALAPFLRKFVLVFFYDILIYSKTREEHIKHIKAVLQVLEKNQLVVRLKKCA 241
Query: 2366 FGKT*IEYLGHIINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLI 2187
FG + + YLGH+I+ V+ DP KI ++ P + +R FLG+TGYYR+FI+ YGLI
Sbjct: 242 FGLSSVAYLGHVISSDGVATDPSKISDIMNRKEPKNVTEVREFLGMTGYYRRFIKGYGLI 301
Query: 2186 SKPLTELLKKNKFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVL 2007
+PL ++LKK F A F + L F +PF IE DAC+ G+GAVL
Sbjct: 302 CRPLHDMLKKGGFNWGLAQSEAFTELKGKLCTSPVLALPNFEQPFVIEADACEVGIGAVL 361
Query: 2006 MQTRRPIAYFNKGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFM 1827
MQ RPIAY++K +G + AA S YEKE M ++ + +WR Y+LG + I TD QSLKY M
Sbjct: 362 MQAGRPIAYYSKALGPKAAAQSIYEKEAMAILEALKRWRHYVLGGELVIKTDQQSLKYMM 421
Query: 1826 EQKLHSFVQQKWLSKLLGYDYEVSYKKGTDNRVADALSRV----QLTTASCTAISQLQLT 1659
Q+L +Q K L KL+ Y+Y + YK G +N VADALSR + T C AI+ +
Sbjct: 422 NQRLVEGIQHKLLLKLMEYNYTIEYKAGRENLVADALSRSPKNKEEVTELCAAIAVVVPE 481
Query: 1658 WIQEVIQSYSSDTLALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAA 1479
WI ++ +SY D A L+ + Y E G++KY GRIY+G TG++R Q++ A
Sbjct: 482 WILDIKRSYEEDVQAHKLLSLIGTAGDPEGEYKFEAGIMKYKGRIYVGETGEIRGQLIQA 541
Query: 1478 IHSSSVRGHSGTQASYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXX 1299
HSS+ GH G +A+YQ+ K FYW GLK+ + +I+ C Q KS +
Sbjct: 542 YHSSTFGGHCGIRATYQRIKKLFYWPGLKKGVENHIRNCPVCQVTKSEHVHIPGLLNPLE 601
Query: 1298 XPDQAWHHISMDFITRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIY 1119
PD AW HISMDF+ LPKS+G++VILVVVDR TKY+HF+ LSHP+T V ++F+DNI+
Sbjct: 602 VPDMAWTHISMDFVEGLPKSKGKDVILVVVDRLTKYAHFIALSHPYTVEEVVQVFMDNIH 661
Query: 1118 KLHGLPSSIVSDRDNIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRC 939
KLHG+P +IV+DRD +F S F+++ F L STAYHPQ DGQT RVN +E+YLRC
Sbjct: 662 KLHGMPIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTERVNQCLESYLRC 721
Query: 938 MTSYRPSKWVTWLPIAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEY 759
MT P W +W+ +AEWW+N+TYHT++++TPF+ LYGY PPQ P + A
Sbjct: 722 MTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQEARVT 781
Query: 758 LQKRQAMSDLLKYALVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLK 579
L++++ + LK ++ +AQ RMK A++ R ER +VGD+VYL+L PYRQ + +R +LK
Sbjct: 782 LEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAFGIRGSLK 841
Query: 578 LAAIFWGPIQVLEKIGSVAYKLQLPPNSKIHPVFHVSQL 462
L ++GP +VLEK+G+VAY+LQLP + IHPVFHVSQL
Sbjct: 842 LRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQL 880
Score = 59.3 bits (142), Expect(2) = 0.0
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = -2
Query: 486 PCFSCLSIKLKLGAGILP*TSLPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAH 307
P F +K LG +P +LP+ + +K P+ VL +R + +N + Q L+ W++
Sbjct: 873 PVFHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSN 932
Query: 306 STPDEATWEDTLTIHHQFP 250
TP EATWED I FP
Sbjct: 933 LTPAEATWEDASYIQKVFP 951
Score = 63.5 bits (153), Expect = 2e-06
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1
Query: 3043 ITELLQSYTSVFSEPTSLPPSRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKL 2879
+ E+L + V EP LPP RA DH I LKP S PPNQRPY++P+ QK +E +
Sbjct: 16 VQEVLSQFPGVMKEPKGLPPRRACDHVINLKPGSEPPNQRPYRVPHYQKEAMENI 70
>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
Japonica Group]
Length = 1629
Score = 777 bits (2006), Expect(2) = 0.0
Identities = 390/818 (47%), Positives = 538/818 (65%), Gaps = 2/818 (0%)
Frame = -3
Query: 2900 KNSS*KTM*EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPL 2721
KN + EMLS G+IQPS +PFSSP+LLVKKKDGSWRFCVDYR LNA+T+K+K+P+P+
Sbjct: 692 KNEIESQVQEMLSKGIIQPSSSPFSSPVLLVKKKDGSWRFCVDYRHLNAITVKNKYPLPV 751
Query: 2720 IEELLDEIHGAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPAS 2541
I+ELLDE+ GA++F+K+DL++GYHQIR+ P D HKTAF+TH GHFEF V+PFGLT+APA+
Sbjct: 752 IDELLDELAGAQWFSKLDLRSGYHQIRMHPDDEHKTAFQTHHGHFEFRVLPFGLTSAPAT 811
Query: 2540 FQTLMNDVFQPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFG 2361
FQ +MN V L + S L+ + L K +KCSF
Sbjct: 812 FQGVMNSVLATLLRRCVLVFVDDILIYSKSLEEHVQHLKTVFQILLKHQLKVKRTKCSFA 871
Query: 2360 KT*IEYLGHIINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISK 2181
+ + YLGHII VS DP+KI+ + WP PT++K LR FLGL+GYYRKF+++YG++SK
Sbjct: 872 QQELAYLGHIIQPNGVSTDPEKIQVIQHWPAPTSVKELRSFLGLSGYYRKFVRNYGILSK 931
Query: 2180 PLTELLKKNKFQCNSA-SQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLM 2004
PLT LL+K + +A ++ F + +F PF +ETDA D G+GAVLM
Sbjct: 932 PLTNLLRKGQLYIWTAETEDAFQALKQALITALVLAMPDFQTPFVVETDASDKGIGAVLM 991
Query: 2003 QTRRPIAYFNKGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFME 1824
Q P+A+ ++ +G+R LSTYEKE + +++ V WRPYL +F I TDH+SL + E
Sbjct: 992 QNNHPLAFLSRALGLRHPGLSTYEKESLAIMLAVDHWRPYLQHDEFFIRTDHRSLAFLTE 1051
Query: 1823 QKLHSFVQQKWLSKLLGYDYEVSYKKGTDNRVADALSRVQLTT-ASCTAISQLQLTWIQE 1647
Q+L + Q K L+KLLG Y++ +KKG DN ADALSR + +A+S WI +
Sbjct: 1052 QRLTTPWQHKALTKLLGLRYKIIFKKGIDNSAADALSRYPGSDRVELSALSVAVPEWIND 1111
Query: 1646 VIQSYSSDTLALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSS 1467
++ YSSD A + L IN AVP ++L GVL + R+++G D++ ++LA +H++
Sbjct: 1112 IVAGYSSDPDACSKVQTLCINSGAVPNFSLRNGVLYFQNRLWVGHNVDVQQRILANLHTA 1171
Query: 1466 SVRGHSGTQASYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQ 1287
+V GHSG Q +YQ+ K F W L+ + QY++ C QQ KS + PD
Sbjct: 1172 AVGGHSGIQVTYQRVKQLFAWPRLRATVVQYVQACSVCQQAKSEHVKYPGMLQPLPVPDH 1231
Query: 1286 AWHHISMDFITRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHG 1107
AW +S+DF+ LPKS ILVVVD+F+KYSHF+PL+HPF+A VA+ ++ +I++LHG
Sbjct: 1232 AWQIVSLDFVEGLPKSASFNCILVVVDKFSKYSHFVPLTHPFSALDVAEAYMQHIHRLHG 1291
Query: 1106 LPSSIVSDRDNIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSY 927
LP S++SDRD IF S W F GT L +S++YHPQ DGQT RVN +E +LRC
Sbjct: 1292 LPQSLISDRDRIFTSTLWTTLFRLAGTQLRMSSSYHPQTDGQTERVNQCLETFLRCFVHA 1351
Query: 926 RPSKWVTWLPIAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKR 747
PS+W WL +AE+W+N+++H++L TPFE LYG+ P FG+S S A + E+L +R
Sbjct: 1352 CPSQWSRWLALAEYWYNTSFHSALGTTPFEVLYGHKPRYFGLSASAACRSDDLVEWLHER 1411
Query: 746 QAMSDLLKYALVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAI 567
+ M L++ L+ AQ RMKQQA++ R ERSF VGD VYL+L P+ Q SV R N KL+
Sbjct: 1412 EKMQALIRDHLLRAQTRMKQQADQHRSERSFAVGDWVYLKLQPFVQQSVVTRANRKLSFR 1471
Query: 566 FWGPIQVLEKIGSVAYKLQLPPNSKIHPVFHVSQLSSS 453
F+GP QVL+K+G+VAY+L LP +S IHPV HVSQL +
Sbjct: 1472 FYGPFQVLDKVGTVAYRLDLPSSSLIHPVVHVSQLKKA 1509
Score = 42.7 bits (99), Expect(2) = 0.0
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -2
Query: 423 LPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAHSTPDEATWEDTLTIHHQFP 250
LP D ++ V P Q+L +R + K + + Q+ V+W P TWE+ + +FP
Sbjct: 1520 LPVLDPTNATHVCPAQILDRRFIRKGSKLVEQIQVRWTGDAPAATTWENPQELRRRFP 1577
Score = 80.1 bits (196), Expect(2) = 8e-19
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Frame = -1
Query: 3349 WQMQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQG-HN 3173
W +Q H F +++VL L DM+LG+D + + SP+ + + + G I L G +
Sbjct: 541 WTIQGHVFFTNLKVLELNNYDMILGMDWLMQHSPMTVDWTTKSLIIAYAGTQIQLYGVRS 600
Query: 3172 ESAQISMMSASVAHNVFKKNKHGMIGRLYSISANXXXXXXXPQITELLQSYTSVFSEPTS 2993
++ Q + +S+ + + + + S+ A + +L ++SVF EP
Sbjct: 601 DTEQCAHISSKQLRELNDRTAVSNLVQFCSVFALEYQEQIPEVVQTVLTEFSSVFDEPKG 660
Query: 2992 LPPSRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKLCRKCYPQGLYNLATTLF 2828
LPP R DH IPL P + P N RPY+ IQK +E ++ +G+ +++ F
Sbjct: 661 LPPIRQFDHTIPLLPGAGPVNVRPYRYTPIQKNEIESQVQEMLSKGIIQPSSSPF 715
Score = 45.1 bits (105), Expect(2) = 8e-19
Identities = 35/123 (28%), Positives = 49/123 (39%)
Frame = -3
Query: 3746 REKGLCYNCDEVYTTGHKCTRQ*LFMLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLH 3567
R +GLCY C E ++ HKC+ L
Sbjct: 408 RAQGLCYICAEKWSPTHKCSNTVQLHAVQELFTVLHESVEDGLSTTDHVVEQTLMAVSLQ 467
Query: 3566 ALAGHISHSTIESHGVIKKKPITILIDSGSTHNFLDPEVAKLCGCVMEPTTPLQVAVANG 3387
A+ G + + G I+ K I IL+DSGS+ +F+ VA V+E +QV VA G
Sbjct: 468 AVQGTETGGCMRMLGQIQGKEILILVDSGSSASFISKRVASSLMGVLEQPVHVQVMVAGG 527
Query: 3386 HKL 3378
KL
Sbjct: 528 AKL 530
>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
Length = 933
Score = 775 bits (2002), Expect(2) = 0.0
Identities = 396/808 (49%), Positives = 525/808 (64%), Gaps = 2/808 (0%)
Frame = -3
Query: 2870 MLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIHG 2691
ML G+IQ S +PFSSP LLVKKKDGSWR C+DYR+LNA+T K +P+P+I+ELLDE+ G
Sbjct: 1 MLQNGIIQHSSSPFSSPALLVKKKDGSWRVCIDYRQLNAITKKGTYPMPIIDELLDELAG 60
Query: 2690 AKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVFQ 2511
AK F+K+DL+AGYHQIR+ + KTAF+TH GH+E+ VM FGLT APA+FQ MND +
Sbjct: 61 AKIFSKLDLRAGYHQIRMAEGEEFKTAFQTHSGHYEYKVMSFGLTGAPATFQGAMNDTLR 120
Query: 2510 PYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGHI 2331
P L K S D+ S+ KLSKC F +T I YLGHI
Sbjct: 121 PLLRKCALVFFDDILIYSPDMNSHLDHLKQVLQLLDTHQWKVKLSKCDFAQTQISYLGHI 180
Query: 2330 INGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKNK 2151
I+G+ VS DP KI+ ++ W PTTLK LR FLGL GYYRKF++ +G +SKPLT+LLKK+
Sbjct: 181 ISGQGVSTDPSKIQSIVDWAVPTTLKKLRGFLGLAGYYRKFVKDFGTLSKPLTQLLKKDA 240
Query: 2150 -FQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYFN 1974
F ++ F L F + F IETDA D G+GAVL Q + P+A+ +
Sbjct: 241 PFVWSAEVNQAFQALKHALTSTPVLALPNFQQGFTIETDASDIGIGAVLSQNQHPVAFVS 300
Query: 1973 KGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQK 1794
K +G R LSTYEKE + ++M V WRPYL +F I TDH SL + EQ+LH+ QQK
Sbjct: 301 KALGPRTQGLSTYEKECLAIMMAVDHWRPYLQFQEFLIITDHHSLMHLTEQRLHTPWQQK 360
Query: 1793 WLSKLLGYDYEVSYKKGTDNRVADALSR-VQLTTASCTAISQLQLTWIQEVIQSYSSDTL 1617
+KL G +++ Y+KG N ADALSR V T+ IS W+Q+++ Y D L
Sbjct: 361 AFTKLSGLQFQIVYRKGKHNAAADALSRHVPEETSEFLGISTCSPVWLQDILHGYDQDPL 420
Query: 1616 ALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQA 1437
AL L+ L +NP++ P Y+L +G++K+ G++++G +++ Q+++A+H S + GHSG
Sbjct: 421 ALSLLTGLAVNPSSYPHYSLSKGLIKHKGKVWVGNNSNIQQQIISALHDSPLGGHSGFPV 480
Query: 1436 SYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDFI 1257
+Y++ K F W +K + + + C Q K S PD AW ISMDFI
Sbjct: 481 TYKRIKSLFSWPHMKLTVQKQLASCAVCLQAKPDRSKYPGLLQPLPVPDGAWQIISMDFI 540
Query: 1256 TRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDRD 1077
LPKS ++ ILVVVD+F+KY+HF+PLSHPF+A VAK+F+ N+YKLHGLP I+SDRD
Sbjct: 541 EGLPKSYHQDCILVVVDKFSKYAHFMPLSHPFSALDVAKVFMLNVYKLHGLPQIIISDRD 600
Query: 1076 NIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWLP 897
IF S W+ F + GT LHLS+AYHPQ DGQT RVN +E +LRC P+KW WL
Sbjct: 601 KIFTSALWEQLFLRSGTKLHLSSAYHPQSDGQTERVNQCLEIFLRCFVHATPAKWSLWLH 660
Query: 896 IAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAMSDLLKYA 717
+AE+W+NS+YH++L TPFE LYGYPP FGI + A S + +L +R M+ LL+
Sbjct: 661 LAEFWYNSSYHSALNKTPFEVLYGYPPSHFGIR-ADACVISDLDSWLSERHLMTQLLRQH 719
Query: 716 LVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFWGPIQVLEK 537
L AQ MK QA+KKR RSFQVGD V+L+L PY Q+SV R N KL+ ++GP Q+L K
Sbjct: 720 LNRAQQVMKTQADKKRSFRSFQVGDWVFLKLQPYVQSSVAKRANHKLSFRYFGPYQILSK 779
Query: 536 IGSVAYKLQLPPNSKIHPVFHVSQLSSS 453
+GSVAYKLQLP +S +HPVFHVSQL +
Sbjct: 780 VGSVAYKLQLPADSMVHPVFHVSQLKGT 807
Score = 38.9 bits (89), Expect(2) = 0.0
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -2
Query: 384 PLQVLAKRTLMKNRQPIPQVLVQWAHSTPDEATWEDTLTIHHQFPKLI 241
P+Q+L R K + + Q+LV W++ EATWED + +FP +
Sbjct: 828 PVQILDTRIQKKGNKVVRQILVCWSNLPAVEATWEDEEELKQRFPSAL 875
>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1548
Score = 770 bits (1989), Expect(2) = 0.0
Identities = 401/819 (48%), Positives = 531/819 (64%), Gaps = 14/819 (1%)
Frame = -3
Query: 2870 MLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIHG 2691
MLS G+I PS +PF+SP+LLVKKKD SWRFCVDYR+LN LTIK+KFP+P+++ELLDE+ G
Sbjct: 645 MLSAGLISPSCSPFASPVLLVKKKDNSWRFCVDYRRLNDLTIKNKFPLPIVDELLDELAG 704
Query: 2690 AKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVFQ 2511
+FF+K+DL++GYHQIR+ +D KTAFKTH GHF+F VMPFGLTNAPA+FQ LMN +F
Sbjct: 705 TQFFSKLDLRSGYHQIRMQESDEFKTAFKTHHGHFQFRVMPFGLTNAPATFQCLMNSIFA 764
Query: 2510 PYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGHI 2331
PYL K S + L AKLSKCSF +EYLGHI
Sbjct: 765 PYLRKFVLVFMDDILVYSKSWTDHLKHLRCVLQLLQQHQLCAKLSKCSFAAPQLEYLGHI 824
Query: 2330 INGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKN- 2154
I+ V+ D +K + ML+WP PT L LR FLGLTGYYRKF+++YG+++KPLT LLKKN
Sbjct: 825 ISAAGVATDAEKTKVMLQWPVPTNLTELRGFLGLTGYYRKFVKNYGILAKPLTVLLKKNV 884
Query: 2153 KFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYFN 1974
KF +Q FD L F+KPF IETDAC G+GAVL Q P+A+++
Sbjct: 885 KFVWTEHTQKAFDSLKLAMSSTPVLVLPNFAKPFTIETDACSTGIGAVLSQEGHPVAFYS 944
Query: 1973 KGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQK 1794
K +G+ LS YEKE + ++M + KWRPYLL F I TDHQSL + +Q L S +Q+K
Sbjct: 945 KALGINNQKLSIYEKEFLAIMMAIDKWRPYLLRGPFVIRTDHQSLCHLDDQLLGSELQRK 1004
Query: 1793 WLSKLLGYDYEVSYKKGTDNRVADALSRVQLTTASCTAISQLQLTWIQEVIQSYSSDTLA 1614
++KL+G Y+ YK+G +N+ ADALSRV S AIS Q W+QEV+ SY D A
Sbjct: 1005 AMTKLIGLQYKFQYKRGAENKSADALSRVG-HFFSLQAISIAQPVWVQEVVNSYVVDNQA 1063
Query: 1613 LDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQAS 1434
L+ +L I ++L G++K GRI++G L T+++++ H S++ GHSG A+
Sbjct: 1064 QSLLTELAIMSPNASGFSLVHGLIKKKGRIWLGANSALHTKIISSFHDSAIGGHSGVMAT 1123
Query: 1433 YQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDFIT 1254
Y + K F W GLK + ++I++C Q+ K + P AW ISMDFI
Sbjct: 1124 YHRVKKLFVWKGLKHSVEEFIQQCVVCQKAKHEHCSSPGLLQPLPIPTGAWQDISMDFIE 1183
Query: 1253 RLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDRDN 1074
LP S+G +VILVVVDRFTKY+HFLPL HPFTA VA +L + L+G+P SIVSDRD
Sbjct: 1184 GLPLSKGSDVILVVVDRFTKYAHFLPLKHPFTAVQVADNYLSKVASLYGMPKSIVSDRDK 1243
Query: 1073 IFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWLPI 894
IF S+FW+ F + L+L+TAYHPQ DGQT RVN +E YLRC + P+KW +WLP+
Sbjct: 1244 IFTSHFWQHLFKRFAIPLNLTTAYHPQSDGQTERVNQCLEMYLRCAVASAPTKWSSWLPL 1303
Query: 893 AEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEE-------------YLQ 753
A++W+N+++H++LK +P + LYG P + PA T AE+ L+
Sbjct: 1304 AQYWYNTSFHSALKCSPHKALYGTDPT---YGLLPAPLTDDAEQTSDDIDDSSGVSALLK 1360
Query: 752 KRQAMSDLLKYALVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLA 573
+R+ S +L++ L Q+RMKQ A+ KR RSFQVGDLV L+L PY Q SV R KLA
Sbjct: 1361 ERELFSTMLQHHLARDQNRMKQFADAKRTARSFQVGDLVLLKLQPYAQRSVIARPFPKLA 1420
Query: 572 AIFWGPIQVLEKIGSVAYKLQLPPNSKIHPVFHVSQLSS 456
++GP ++L +GSVAY+L+LP +S IHPVFHVSQL S
Sbjct: 1421 FKYFGPFEILAVVGSVAYRLKLPADSLIHPVFHVSQLKS 1459
Score = 42.4 bits (98), Expect(2) = 0.0
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = -2
Query: 423 LPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAHSTPDEATWEDTLTIHHQFPKL 244
LP+ + + P VL +R + K I QVLVQW P ATWED + +FP
Sbjct: 1471 LPTAAQLDIADLIPSAVLERRLVKKGNAAIVQVLVQWGSLPPALATWEDYDVVRTRFPDA 1530
Query: 243 I 241
+
Sbjct: 1531 V 1531
Score = 91.3 bits (225), Expect(2) = 1e-27
Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 3/178 (1%)
Frame = -1
Query: 3352 SWQMQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQGHN 3173
+W +Q H+F F +RVL +GG D+VLG+D + + SP+ + + G ITL+G
Sbjct: 481 AWWVQGHEFSFPMRVLPMGGYDLVLGMDWLTQFSPMTCDWAAKQLQFSYNGSVITLKGIQ 540
Query: 3172 ESAQISMMSASVAHNVFKKNKHGMIGRLYSISANXXXXXXXP---QITELLQSYTSVFSE 3002
S ++ +S A V K K I + + + +I +LLQ + SVF +
Sbjct: 541 TSDELRPVSEVSAVQVMKWTKGNDIWAMAVVEPSQSVDNSASTFPEIQQLLQEFQSVFQD 600
Query: 3001 PTSLPPSRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKLCRKCYPQGLYNLATTLF 2828
+LPP R DH I L P SVP N RPY+ QK +E+ GL + + + F
Sbjct: 601 SNTLPPHRVLDHVISLLPNSVPVNARPYRYSPAQKDEIERQVSTMLSAGLISPSCSPF 658
Score = 63.5 bits (153), Expect(2) = 1e-27
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = -3
Query: 3746 REKGLCYNCDEVYTTGHKCTRQ*LFMLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL- 3570
R +GLC+ C E Y GH C +Q L A L
Sbjct: 347 RAQGLCFKCGEKYAPGHVCAKQEGVQLKALHVQEESEVLSDEVLDAITALDVSSDSISLS 406
Query: 3569 -HALAGHISHSTIESHGVIKKKPITILIDSGSTHNFLDPEVAKLCGCVMEPTTPLQVAVA 3393
HA+AG T++ +++ + I IL+DSGSTH+F+D + E P V VA
Sbjct: 407 LHAMAGTCPSHTVQLRALVQNQVIIILVDSGSTHSFIDAGLCHRLQLSTESIQPTSVRVA 466
Query: 3392 NGHKLLSQARCP 3357
NG L +A+ P
Sbjct: 467 NGETLCCEAKVP 478
>ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Zea mays]
gi|670423336|ref|XP_008652482.1| PREDICTED: transposon
Tf2-1 polyprotein isoform X1 [Zea mays]
Length = 1567
Score = 768 bits (1983), Expect(2) = 0.0
Identities = 391/806 (48%), Positives = 525/806 (65%)
Frame = -3
Query: 2873 EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIH 2694
EML G I S +PF+SP+LLVKKKDGSWRFCVDYRKLN +T+K+KFP+P+I+E +DE+
Sbjct: 663 EMLQAGTITRSVSPFASPVLLVKKKDGSWRFCVDYRKLNDITVKNKFPMPIIDEFIDELA 722
Query: 2693 GAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVF 2514
GAK F+K+D+ AG+HQIR+ D KTAFKTH GHF+F VMPFGLTNAPA+FQ LMN VF
Sbjct: 723 GAKVFSKLDMAAGFHQIRMADQDEMKTAFKTHHGHFQFRVMPFGLTNAPATFQCLMNAVF 782
Query: 2513 QPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGH 2334
Q + K S L+++ L+AK SKC+F T IEYLGH
Sbjct: 783 QQLMRKCVLIFMDDILVYSPSLETHVVHLQQVFQVLETHQLYAKRSKCAFALTQIEYLGH 842
Query: 2333 IINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKN 2154
II+ K VS DP K E M +WPTP + LR FLGLTGYYRKF++ YG+++KPLT LL++
Sbjct: 843 IISDKGVSTDPSKTESMRRWPTPKSHTELRGFLGLTGYYRKFVKGYGILAKPLTVLLQQK 902
Query: 2153 KFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYFN 1974
+F ++QT F+ L FS+ F IETDACD G+GAVL Q P+A+++
Sbjct: 903 QFGWPPSAQTAFEALKDAMITTPVLALPNFSETFVIETDACDTGIGAVLSQKGHPVAFYS 962
Query: 1973 KGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQK 1794
K +GV+ + LSTYEKE + ++M V KWR YL F I TDH+SL + +Q L + +Q+K
Sbjct: 963 KALGVKNSQLSTYEKEFLAILMAVEKWRCYLSRGPFVIRTDHRSLCHLQDQTLATDMQKK 1022
Query: 1793 WLSKLLGYDYEVSYKKGTDNRVADALSRVQLTTASCTAISQLQLTWIQEVIQSYSSDTLA 1614
++KL G + V YKKG +N+ ADALSRV +AIS W+QE+ SY DT A
Sbjct: 1023 AMTKLAGLQFSVQYKKGAENKAADALSRVA-HNMELSAISATTPVWLQEITNSYELDTHA 1081
Query: 1613 LDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQAS 1434
L+ +L ++ + L+ G++ N R+ +G L+T++++A H+S + GHSG QA+
Sbjct: 1082 QSLLAELAVSSPNEQGFELKNGLIYKNNRLVVGQNVGLQTKLISAFHASPLGGHSGIQAT 1141
Query: 1433 YQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDFIT 1254
YQ+ K F W GLK + Q++++C QQ K + P +W +SMDFI
Sbjct: 1142 YQRVKKLFLWNGLKADVEQFVRQCHVCQQAKHEHCKYPGLLQPLPIPQSSWQDLSMDFIE 1201
Query: 1253 RLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDRDN 1074
LPKS G VILVVVDR TKY+HFL + HPFTAS +A LF + KLHG P +IVSDRD
Sbjct: 1202 GLPKSNGYSVILVVVDRLTKYAHFLAVKHPFTASHIAHLFFSQVVKLHGFPHTIVSDRDK 1261
Query: 1073 IFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWLPI 894
+F S FW++ F GT LHLS+AYHPQ DGQT RVN +E +LRC PS+W WL
Sbjct: 1262 VFTSTFWQELFKLSGTQLHLSSAYHPQSDGQTERVNQCLEMFLRCAVHNSPSQWAKWLDS 1321
Query: 893 AEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAMSDLLKYAL 714
AE W+N++YHTS+K +PF+ LYG P I ++ +++ S A+ LQ+RQ +++K L
Sbjct: 1322 AELWYNTSYHTSIKCSPFKALYGVEPNLGCIPVTDSLNPSEAQLTLQQRQEFLEVIKTNL 1381
Query: 713 VEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFWGPIQVLEKI 534
AQ RMK A+ R R FQ+GDLVYL+L P+ Q SV R KL+ ++GP ++++K+
Sbjct: 1382 ASAQSRMKHYADLNRSFRQFQIGDLVYLKLQPFAQVSVAYRPCAKLSFKYFGPFKIVDKV 1441
Query: 533 GSVAYKLQLPPNSKIHPVFHVSQLSS 456
GS AYKL LP ++ IHPVFHVSQL +
Sbjct: 1442 GSAAYKLLLPESANIHPVFHVSQLKT 1467
Score = 40.0 bits (92), Expect(2) = 0.0
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = -2
Query: 429 TSLPSTDKESSLKVTPLQVLAKRTLMKNRQPIPQVLVQWAHSTPDEATWEDTLTIHHQFP 250
T LP T ++ P ++L +R + K + Q+L++W + A+WED + +FP
Sbjct: 1477 TELPPTAFSENVTPNPERILDRRLVKKGSAAVTQILIKWEGIPVEMASWEDYTVLQSRFP 1536
Score = 71.2 bits (173), Expect = 9e-09
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 4/190 (2%)
Frame = -1
Query: 3385 INY*VRQDAHLSWQMQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTS 3206
I Y ++ L W F D VL DMVLG+D +++ SP+ +++ +
Sbjct: 488 IIYCQKKVVQLKWWCGGKTFTVDAFVLPATAYDMVLGMDWLEKFSPMLCDWDRKWVEFSY 547
Query: 3205 KGDNITLQG--HNESAQISMMSASVAHNVFKKNKHGMIGRLYSISANXXXXXXXPQ--IT 3038
+G I LQG + +A + S K N+ + L ++ +
Sbjct: 548 EGVRIRLQGVGNKSAALLPEASHEQIQRWHKGNEIWAVALLQQVTPELKVVTGQVPECVQ 607
Query: 3037 ELLQSYTSVFSEPTSLPPSRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKLCRKCYPQ 2858
E+L + VF P SLPPSR +DH I L P + P N RPY+ +QK +E+ ++
Sbjct: 608 EVLDQFKEVFKTPDSLPPSREYDHTISLLPGTTPVNVRPYRYSPLQKDEIERQVQEMLQA 667
Query: 2857 GLYNLATTLF 2828
G + + F
Sbjct: 668 GTITRSVSPF 677
>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 763 bits (1970), Expect(2) = 0.0
Identities = 385/827 (46%), Positives = 534/827 (64%), Gaps = 4/827 (0%)
Frame = -3
Query: 2930 PKALQNTLYP---KNSS*KTM*EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKL 2760
P +++ YP K+ K + EML GVIQ S++ F+SP+LLVKKKD +WRFCVDYR L
Sbjct: 641 PVSVRPYRYPPALKDKIEKQVQEMLHQGVIQKSNSSFASPVLLVKKKDMTWRFCVDYRYL 700
Query: 2759 NALTIKDKFPIPLIEELLDEIHGAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEF 2580
NALT+K K+P+P+ ++L+DE+ +K+F+K+DL+AGYHQI + P + +KTAF+TH GH+EF
Sbjct: 701 NALTLKSKYPVPVFDQLIDELAHSKWFSKLDLRAGYHQILLKPGEEYKTAFQTHVGHYEF 760
Query: 2579 LVMPFGLTNAPASFQTLMNDVFQPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXX 2400
VM FGLT AP +F + MN+ +P L K S + +
Sbjct: 761 RVMAFGLTGAPNTFLSAMNETLKPVLRKCALVFFDDILIYSKSFEEHLLHLQKVLQLLLS 820
Query: 2399 XXLFAKLSKCSFGKT*IEYLGHIINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGY 2220
KLSKC F KT YLGHII+ + VS P KI+ + W PT+ K LR FLGL G+
Sbjct: 821 DNWKVKLSKCEFAKTNTAYLGHIISEQGVSTYPSKIQAISSWAVPTSAKELRCFLGLAGF 880
Query: 2219 YRKFIQHYGLISKPLTELLKKNK-FQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIE 2043
YRKF++H+G+IS+PL +LLKK+ F F+ L +FS+PF I
Sbjct: 881 YRKFVKHFGIISRPLFDLLKKHTLFVWTVDHSKAFEVLKQALVTAPVLALPDFSQPFCIH 940
Query: 2042 TDACDNGVGAVLMQTRRPIAYFNKGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFT 1863
TDA GVGAVLMQ+ P+A+ +K +G + LSTYEKE M +++ +++WR YL +F
Sbjct: 941 TDASYYGVGAVLMQSGHPLAFLSKALGPKNQGLSTYEKEYMAIILAIAQWRSYLQLAEFI 1000
Query: 1862 IFTDHQSLKYFMEQKLHSFVQQKWLSKLLGYDYEVSYKKGTDNRVADALSRVQLTTASCT 1683
I+TDH+SL EQ+LH+ QQK +KL G Y++ Y+KG DN ADALSR + C
Sbjct: 1001 IYTDHRSLAQLNEQRLHTIWQQKMYTKLAGLQYKIVYRKGVDNGAADALSRKVQEDSHCC 1060
Query: 1682 AISQLQLTWIQEVIQSYSSDTLALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGD 1503
AIS TW+QEV++ Y D + L+ +L++N ++L QG++++ RI++G
Sbjct: 1061 AISHSVPTWLQEVVEGYDKDPTSKQLLAQLILNSADKAPFSLHQGIIRHKNRIWLGGNLQ 1120
Query: 1502 LRTQVLAAIHSSSVRGHSGTQASYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXX 1323
L+ +VL A+H ++V GHSG A+Y K K FYW G++ + QY++ C QQ K +
Sbjct: 1121 LQQKVLQAMHDTAVGGHSGAPATYHKVKQMFYWPGMRADVLQYVQSCTVCQQSKPDRAKY 1180
Query: 1322 XXXXXXXXXPDQAWHHISMDFITRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVA 1143
P QAWH IS+DFI LP+S ILVVVD+F+KY HFLPL HPFTA+ VA
Sbjct: 1181 PGLLQPLEVPPQAWHTISLDFIEGLPRSAHYNCILVVVDKFSKYGHFLPLLHPFTAAKVA 1240
Query: 1142 KLFLDNIYKLHGLPSSIVSDRDNIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNA 963
++FLDN+YKLHGLP +I+SDRD IF S+FW+ F GT L +S++YHPQ DGQT R+N
Sbjct: 1241 RVFLDNVYKLHGLPVNIISDRDRIFTSSFWQQLFQITGTNLSMSSSYHPQSDGQTERLNQ 1300
Query: 962 FVENYLRCMTSYRPSKWVTWLPIAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAM 783
+E +LRC PS+W WL +AE+W+N+T H++L TPFE LYG+ P FGI + +
Sbjct: 1301 CLETFLRCYVHTCPSRWSAWLSVAEYWYNTTVHSTLGRTPFEVLYGHTPRHFGILVDTVV 1360
Query: 782 STSSAEEYLQKRQAMSDLLKYALVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTS 603
E +L++R+ M+ ++K L AQ RMK+QA+K+R ER F VGD VYL+L PY Q+S
Sbjct: 1361 PQPELETWLKERELMTKVIKLHLHRAQDRMKRQADKQRSERVFSVGDWVYLKLQPYIQSS 1420
Query: 602 VQLRRNLKLAAIFWGPIQVLEKIGSVAYKLQLPPNSKIHPVFHVSQL 462
V R N KL+ F+GP Q+ +++GSVAY+L LP +S IHP+FHVSQL
Sbjct: 1421 VATRSNHKLSFKFFGPFQITDRLGSVAYRLALPASSSIHPIFHVSQL 1467
Score = 42.4 bits (98), Expect(2) = 0.0
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = -2
Query: 384 PLQVLAKRTLMKNRQPIPQVLVQWAHSTPDEATWEDTLTIHHQFPKLILEDK 229
P ++L +R + + + I QV V W+ T D ATWED + +FPK ++ D+
Sbjct: 1491 PTRILQRRFIDRGGELIAQVKVVWSGMTEDLATWEDVEALRARFPKALIWDQ 1542
Score = 75.5 bits (184), Expect(2) = 2e-20
Identities = 53/174 (30%), Positives = 84/174 (48%)
Frame = -1
Query: 3349 WQMQVHQFQFDIRVLALGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQGHNE 3170
WQ+Q F D+ L L DMV+G+D ++ SP++ + + + +G ++ LQG+
Sbjct: 518 WQIQNCSFTSDVSFLPLPYYDMVVGMDWLESFSPMRVDWAQKWLIIPYQGSSVLLQGNTA 577
Query: 3169 SAQISMMSASVAHNVFKKNKHGMIGRLYSISANXXXXXXXPQITELLQSYTSVFSEPTSL 2990
+V +F + S S+ P I LLQ ++SVF+EP L
Sbjct: 578 GVPAD----TVIELLFME----------SASSVSSSPDSHPAIQALLQQFSSVFAEPQGL 623
Query: 2989 PPSRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEKLCRKCYPQGLYNLATTLF 2828
PPSR DH IPL + P + RPY+ P K +EK ++ QG+ + + F
Sbjct: 624 PPSRDCDHAIPLVEGAQPVSVRPYRYPPALKDKIEKQVQEMLHQGVIQKSNSSF 677
Score = 55.1 bits (131), Expect(2) = 2e-20
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 7/152 (4%)
Frame = -3
Query: 3821 TPTTSHANSTLPPIKKLSYTDM-----RACREKGLCYNCDEVYTTGHKC--TRQ*LFMLD 3663
T TS+ +ST + S++D R R KGLC C E + GHKC T Q M +
Sbjct: 357 TKWTSNKDST----QSASHSDKLESLRRFRRAKGLCDKCAEKWNPGHKCAATAQLHAMEE 412
Query: 3662 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHALAGHISHSTIESHGVIKKKPITILIDS 3483
A G T++ +G I+ P+ ILIDS
Sbjct: 413 VWSLLVDEEVPESDLSPPEPAPEQLFVTISKSAWTGSTGRQTLKLNGSIQNHPLLILIDS 472
Query: 3482 GSTHNFLDPEVAKLCGCVMEPTTPLQVAVANG 3387
GS+H FL+ ++ V + LQV VANG
Sbjct: 473 GSSHTFLNDQLRPHLQGVTSMASTLQVQVANG 504
>gb|KOM49767.1| hypothetical protein LR48_Vigan08g059400 [Vigna angularis]
Length = 1563
Score = 738 bits (1906), Expect(2) = 0.0
Identities = 371/815 (45%), Positives = 513/815 (62%), Gaps = 4/815 (0%)
Frame = -3
Query: 2885 KTM*EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELL 2706
K + EML GVI+ S++P+SSP++LVKKKDGSWRFCVDYR LN TI DKFPIPLIEELL
Sbjct: 600 KQVAEMLQAGVIRSSNSPYSSPVILVKKKDGSWRFCVDYRALNRATIPDKFPIPLIEELL 659
Query: 2705 DEIHGAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLM 2526
DE+ GAK+F+K+DLK+GYHQIR+ D KTAF+TH+GH+EF+VMPFGLTNAPA+FQ+ M
Sbjct: 660 DELRGAKYFSKVDLKSGYHQIRMGAGDIEKTAFRTHQGHYEFMVMPFGLTNAPATFQSAM 719
Query: 2525 NDVFQPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IE 2346
N + QPYL K S + + A KC FG+T I
Sbjct: 720 NKLLQPYLRKFVLVFFDDILVYSRTWEEHLEHVGTVLRELVANGWVANRKKCEFGRTQIG 779
Query: 2345 YLGHIINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTEL 2166
YLGH I+ K V +D K+ +++W P T+K+LR FLGLTGYYR+F++ YG I++PLT+L
Sbjct: 780 YLGHRISEKGVEMDEDKVRAVMEWDKPKTVKALRGFLGLTGYYRRFVKDYGKIARPLTDL 839
Query: 2165 LKKNKFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPI 1986
LKK +F ++ + + L +F +PF IE D G+GAVLMQ ++PI
Sbjct: 840 LKKGQFAWTEQAEESMLRLKQAITTAPVLILPDFDQPFHIECDTSGRGIGAVLMQGKQPI 899
Query: 1985 AYFNKGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSF 1806
A+F+K + S YEKELM +V+ + WRPYLLG +F + TD +SLKY +EQ++ +
Sbjct: 900 AFFSKALSEGSLGKSIYEKELMALVLAIQHWRPYLLGQRFVVHTDQRSLKYLLEQRITTQ 959
Query: 1805 VQQKWLSKLLGYDYEVSYKKGTDNRVADALSRVQ----LTTASCTAISQLQLTWIQEVIQ 1638
QQ WL+KLLGYD+E+ YK G N+VADALSR + I++ +E+++
Sbjct: 960 NQQDWLAKLLGYDFEIVYKSGVTNKVADALSRKNEDELQEEKELSVIARPYWQDFREILE 1019
Query: 1637 SYSSDTLALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVR 1458
+D +I L +P + P +TLE L Y GR+ + +++A H++
Sbjct: 1020 EVEADEELRKVIDDLKRDPNSHPSFTLENERLHYKGRLVLSARSAWVPKLIAEFHTTQTG 1079
Query: 1457 GHSGTQASYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWH 1278
GHSG +Y+K YWVG+K+ + +++ C QQHK S P+ W
Sbjct: 1080 GHSGVYRTYRKVAQSLYWVGMKKAVTEFVASCLVCQQHKYLTSSPQGLLQPLPIPNAIWE 1139
Query: 1277 HISMDFITRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPS 1098
ISMDFI +LPKS G + +LVVVDR +KY HF+PL HP++A ++A++F+ I +LHG+P
Sbjct: 1140 EISMDFIVKLPKSRGYDAVLVVVDRLSKYGHFIPLKHPYSARTIAEVFVKEIVRLHGVPL 1199
Query: 1097 SIVSDRDNIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPS 918
SIVSDRD +F+SNFWK+ F GT L +STAYHP+ DGQT VN +E YLRC S +P
Sbjct: 1200 SIVSDRDPLFLSNFWKELFKLQGTHLKMSTAYHPESDGQTEVVNRVLEGYLRCFCSEQPK 1259
Query: 917 KWVTWLPIAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAM 738
W LP AE+W+N++Y S K TPFET+YG PPP + + + LQ R
Sbjct: 1260 GWCIVLPWAEYWYNTSYQESAKCTPFETVYGRPPPSLHRFVPGETLVEAVNQELQTRDEA 1319
Query: 737 SDLLKYALVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFWG 558
LK+ L AQ M +QA+K R VGD VYL++ P+RQT++ + KLAA ++G
Sbjct: 1320 LHQLKFHLARAQELMVRQADKARRPSQVGVGDWVYLKIRPHRQTTMSSTVHSKLAARYFG 1379
Query: 557 PIQVLEKIGSVAYKLQLPPNSKIHPVFHVSQLSSS 453
P V++++G+VA+KLQLP +++IHPVFH SQL +
Sbjct: 1380 PFLVIQQVGAVAFKLQLPESARIHPVFHASQLKKA 1414
Score = 63.5 bits (153), Expect(2) = 0.0
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Frame = -1
Query: 3301 LGGCDMVLGVD*MKEISPVKFYFNKLTFSLTSKGDNITLQGH--------NESAQISMMS 3146
LGG D++LGV+ + ++ V + +LT + G +T++G +A + M
Sbjct: 447 LGGVDVILGVEWLAKLGEVTLNWGQLTMAYVQAGRRMTIKGDPTLTRRLVEPAALLKMKE 506
Query: 3145 ASV------AHNVFKKNKHGMIGRLYSISANXXXXXXXPQITELLQSYTSVFSEPTSLPP 2984
+ K+ + + +T +L+ Y +VF EP LPP
Sbjct: 507 VEIWLLMWELGETEKEEEQRPNAQEQETFGPELTRKQTFDMTRILERYANVFHEPNGLPP 566
Query: 2983 SRAHDHHIPLKPLSVPPNQRPYKIPYIQKTVVEK 2882
R H IPLK + P N RPY+ P++ + +EK
Sbjct: 567 DRGLVHQIPLKEGTDPVNVRPYRYPHVMEGEIEK 600
>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 1923
Score = 753 bits (1943), Expect(2) = 0.0
Identities = 385/806 (47%), Positives = 523/806 (64%), Gaps = 2/806 (0%)
Frame = -3
Query: 2873 EMLSTGVIQPSHNPFSSPILLVKKKDGSWRFCVDYRKLNALTIKDKFPIPLIEELLDEIH 2694
EML +GVIQ S++ FSSP LLVKKKDG+WR C+DY+ LNA+TIK K+P+P+I+ELLDE+
Sbjct: 97 EMLQSGVIQNSNSAFSSPALLVKKKDGTWRLCIDYKHLNAITIKGKYPLPVIDELLDELS 156
Query: 2693 GAKFFTKIDLKAGYHQIRVFPADTHKTAFKTHRGHFEFLVMPFGLTNAPASFQTLMNDVF 2514
GAK+F+K+DL+AGYHQIR+ P + HKTAF+TH GH+E+ VM FGLT APA+FQ MND
Sbjct: 157 GAKYFSKLDLRAGYHQIRLQPGEEHKTAFQTHSGHYEYRVMSFGLTGAPATFQKAMNDTL 216
Query: 2513 QPYLIKXXXXXXXXXXX*SHDLQSYXXXXXXXXXXXXXXXLFAKLSKCSFGKT*IEYLGH 2334
L K S DL S+ KLSKCSF + + YLGH
Sbjct: 217 ATVLRKFTLVFFDDILIYSPDLPSHIQHLEQVLQLLQAQQWKVKLSKCSFAQQQLAYLGH 276
Query: 2333 IINGKEVSVDPQKIECMLKWPTPTTLKSLRRFLGLTGYYRKFIQHYGLISKPLTELLKKN 2154
II V+ DP KI +L W P ++K LR FLGL GYYRKF++++G I+KPLT+LLKK
Sbjct: 277 IIGKDGVTTDPSKIADVLHWKIPQSVKQLRGFLGLAGYYRKFVRNFGTINKPLTQLLKKG 336
Query: 2153 -KFQCNSASQTTFDQXXXXXXXXXXXXLHEFSKPFEIETDACDNGVGAVLMQTRRPIAYF 1977
F+ + F+ L +FSK F +ETDACD G+GAVL Q R PIA+
Sbjct: 337 VPFKWTAQMDEAFNALKQALVSAPVLALPDFSKTFTVETDACDMGIGAVLSQDRHPIAFV 396
Query: 1976 NKGMGVRFAALSTYEKELMVVVMEVSKWRPYLLGTKFTIFTDHQSLKYFMEQKLHSFVQQ 1797
+K +G + LSTYEKE + +++ V +WR YL +F I TDH +L + +Q+LH+ +Q
Sbjct: 397 SKALGPKTRGLSTYEKEYLAILLAVDQWRSYLQHDEFVILTDHHNLMHITDQRLHTPLQH 456
Query: 1796 KWLSKLLGYDYEVSYKKGTDNRVADALSRV-QLTTASCTAISQLQLTWIQEVIQSYSSDT 1620
K +KL+G Y+V Y++GT N ADALSR + T A+S+ Q W+ V++ Y +D
Sbjct: 457 KAFTKLMGLQYKVCYRRGTSNAAADALSRRDEETNDQLWAVSECQPLWLTAVVKGYETDE 516
Query: 1619 LALDLIPKLLINPTAVPLYTLEQGVLKYNGRIYIGFTGDLRTQVLAAIHSSSVRGHSGTQ 1440
A L+ +L ++PTA + L QGVL+Y G+I+IG L+ Q++ A+H+S + GHSG
Sbjct: 517 QAQQLLTELALHPTAREHFHLVQGVLRYKGKIWIGHNLSLQQQLVTALHASPIGGHSGFP 576
Query: 1439 ASYQKSKLYFYWVGLKRVLFQYIKECDSYQQHKSSNSXXXXXXXXXXXPDQAWHHISMDF 1260
+YQ+ K F W +K+++ Q++K C QQ K + P+ AW +S+DF
Sbjct: 577 VTYQRVKALFAWPQMKKMIQQWVKNCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSLDF 636
Query: 1259 ITRLPKSEGREVILVVVDRFTKYSHFLPLSHPFTASSVAKLFLDNIYKLHGLPSSIVSDR 1080
I LPKSE ILVVVD+F++Y+HF+PLSHPF+A VA ++ NIYKLHG+P ++SDR
Sbjct: 637 IEGLPKSERYNCILVVVDKFSRYAHFVPLSHPFSALDVAVSYMKNIYKLHGMPKVLISDR 696
Query: 1079 DNIFISNFWKDFFNKMGTTLHLSTAYHPQFDGQT*RVNAFVENYLRCMTSYRPSKWVTWL 900
D IF S W+ F K G LHLS+AYHPQ DGQT RVN +E +LRC T+ P KWVTWL
Sbjct: 697 DKIFTSKLWEFLFLKSGIALHLSSAYHPQSDGQTKRVNQCLEMFLRCFTNAAPFKWVTWL 756
Query: 899 PIAEWWFNSTYHTSLKLTPFETLYGYPPPQFGISISPAMSTSSAEEYLQKRQAMSDLLKY 720
+A +W+N+ +H++L TPFE LYG+ P Q G+++ A +L +R+ M++LL+
Sbjct: 757 HLAGYWYNTCFHSALNKTPFEVLYGHNPLQLGVTMETCAIPDLA-VWLHERKLMAELLQQ 815
Query: 719 ALVEAQHRMKQQANKKRVERSFQVGDLVYLRL*PYRQTSVQLRRNLKLAAIFWGPIQVLE 540
L Q +MK A+K R R F VGD V+L+L PY Q SV R KLA F+GP Q+L
Sbjct: 816 HLHRVQQKMKFHADKNRSFREFAVGDWVFLKLQPYVQKSVASRACHKLAFKFYGPFQILA 875
Query: 539 KIGSVAYKLQLPPNSKIHPVFHVSQL 462
++G+VAYKLQLP +S IHPVFHVSQL
Sbjct: 876 RVGTVAYKLQLPDDSTIHPVFHVSQL 901
Score = 47.8 bits (112), Expect(2) = 0.0
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = -2
Query: 390 VTPLQVLAKRTLMKNRQPIPQVLVQWAHSTPDEATWEDTLTIHHQFP 250
V PLQ+L +R + K + + QVLV W+ S ++ATWED + +FP
Sbjct: 923 VYPLQILDQRLIRKGNRTVSQVLVYWSDSVAEDATWEDREDLQQRFP 969