BLASTX nr result
ID: Papaver30_contig00044449
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00044449
(2569 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIG55302.1| gag-pol, partial [Camellia sinensis] 402 0.0
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera] 377 0.0
ref|XP_007213082.1| hypothetical protein PRUPE_ppa021229mg [Prun... 386 0.0
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo] 398 0.0
ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prun... 382 0.0
gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subc... 387 0.0
gb|AEV42258.1| hypothetical protein [Beta vulgaris] 383 0.0
emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group] 390 0.0
emb|CAH66284.1| OSIGBa0161P06.1 [Oryza sativa Indica Group] 387 0.0
ref|XP_007044383.1| DNA/RNA polymerases superfamily protein [The... 353 0.0
gb|ABA92233.1| retrotransposon protein, putative, Ty3-gypsy subc... 386 0.0
emb|CAH66048.1| OSIGBa0131F24.2 [Oryza sativa Indica Group] 382 0.0
prf||1510387A retrotransposon del1-46 361 0.0
emb|CAD40208.2| OSJNBa0019J05.6 [Oryza sativa Japonica Group] 382 0.0
gb|AAV31273.1| putative polyprotein [Oryza sativa Japonica Group... 384 0.0
ref|XP_007044250.1| DNA/RNA polymerases superfamily protein [The... 392 0.0
emb|CAH66749.1| H0409D10.7 [Oryza sativa Indica Group] 385 0.0
gb|AAN09852.1| putative polyprotein [Oryza sativa Japonica Group] 380 0.0
gb|ABG65971.1| retrotransposon protein, putative, Ty3-gypsy subc... 380 0.0
gb|AAM93458.1| putative polyprotein [Oryza sativa Japonica Group... 380 0.0
>gb|AIG55302.1| gag-pol, partial [Camellia sinensis]
Length = 923
Score = 402 bits (1034), Expect(4) = 0.0
Identities = 186/266 (69%), Positives = 224/266 (84%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
+F+VVF+DD+LIYS ++EEH EHLR+ +E LR H+LYAKF KCEFW+ EV+FLGHVV+ +
Sbjct: 140 RFVVVFVDDILIYSPSEEEHEEHLRVVLELLRAHRLYAKFGKCEFWLREVKFLGHVVSGE 199
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VD K+EAV W +PKNVFEIR+FLGLA Y R+FV+ FS LA+PLT+LTRKGVKFVW
Sbjct: 200 GVSVDTSKVEAVQDWAQPKNVFEIRNFLGLAGYYRQFVKDFSRLASPLTRLTRKGVKFVW 259
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
CE SFQ LK +LT+APVL+ PE G+GY ++ D S +GLGCVLMQ G+VV Y SRQLK
Sbjct: 260 SETCEKSFQELKVRLTTAPVLIIPERGLGYAVYCDASREGLGCVLMQEGKVVAYGSRQLK 319
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE+NYPTHDLEL A++FALKIWRHYLY EKFE+FSDHKS +Y+FTQRDLNLRQ WMEF
Sbjct: 320 IHEKNYPTHDLELTAVIFALKIWRHYLYGEKFEVFSDHKSFKYLFTQRDLNLRQRWWMEF 379
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKS 1772
I+DY+F L HPGKANVVADALSRK+
Sbjct: 380 IEDYDFELHCHPGKANVVADALSRKT 405
Score = 366 bits (940), Expect(4) = 0.0
Identities = 170/319 (53%), Positives = 228/319 (71%), Gaps = 3/319 (0%)
Frame = -3
Query: 1763 LACLGLHTWKLYEAVEGLSLEDKGSEVHSC---NIVVQPVLIQEIVETQKNSDDLNEICR 1593
+AC+ + W++ A+ L G V + ++V QP L+ ++E Q+ ++ +
Sbjct: 409 VACIAIREWEMLGALGEFDLL-LGESVEAAALFSVVAQPTLVTRVLEAQRGDLEIESLRE 467
Query: 1592 KFFDGTGPDG*EIQSD*GLRYSRRLVVPSVLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQ 1413
K G G + + +RY RL VP + +V+ E H S+ ++HPG +KMY+DL RQ
Sbjct: 468 KISSGKVEKGLTVYPEQSVRYRDRLFVPESCREEVLGEFHHSRLAVHPGGTKMYQDLGRQ 527
Query: 1412 FWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTS 1233
FWW GMK+D+A +VS+CLTCQQV EH+ P+GLLQPL +AEWKWEHITM FV GLPRT
Sbjct: 528 FWWRGMKRDVAVFVSKCLTCQQVKAEHQRPAGLLQPLPIAEWKWEHITMDFVVGLPRTQR 587
Query: 1232 GCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMF 1053
G D +W +VDRLTKSAHF+P++ D++ L+ LY++++VRLHGVP++IVSDRDP FT+
Sbjct: 588 GSDAIWVVVDRLTKSAHFIPMRVRDSMDHLADLYIRDVVRLHGVPVTIVSDRDPCFTARL 647
Query: 1052 W*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYN 873
W S Q A+ T L+FSTA+HPQTDG+SER IQILEDMLR C LDF G+W LPL+EF+YN
Sbjct: 648 WQSLQSALGTKLTFSTAYHPQTDGQSERTIQILEDMLRGCVLDFSGTWERHLPLVEFAYN 707
Query: 872 NSYQASIGMAPF*ALYGRP 816
NS+Q+SIGMAPF ALYGRP
Sbjct: 708 NSFQSSIGMAPFEALYGRP 726
Score = 214 bits (545), Expect(4) = 0.0
Identities = 94/175 (53%), Positives = 138/175 (78%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C+SPV W +VG+ LLGPE VRETT+KI++I+KRL+ +QSRQKSYAD ++ + F VG+
Sbjct: 727 CRSPVFWADVGDAPLLGPELVRETTKKIELIRKRLVTAQSRQKSYADRRKRAMVFEVGDH 786
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
+FL+++PR+G++RFG G L+PR+IGPF I++R+GEV+Y L L ++ VH+VF++S+L+
Sbjct: 787 VFLKISPRRGLMRFGKSGKLSPRFIGPFEILERIGEVAYRLALLPKLSGVHDVFYVSILQ 846
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWKYRMV 292
Y+PD SH++DW +EV + A+YEE P+R+LD ++QVLR KT VK LWK+ V
Sbjct: 847 KYEPDPSHVLDWTDLEVDEDASYEERPVRVLDRRDQVLRGKTIPLVKVLWKHHGV 901
Score = 42.4 bits (98), Expect(4) = 0.0
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -1
Query: 298 HGSEEATWELESEMKEKYPDLFI 230
HG EEATWE E E++EKYPD+FI
Sbjct: 899 HGVEEATWERELEVREKYPDMFI 921
>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 377 bits (969), Expect(3) = 0.0
Identities = 179/266 (67%), Positives = 216/266 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
+F++VF+DD+LIYS++ EEH +HL T+ TLR HQLY K K EFW+ EV FLGHVV++
Sbjct: 834 RFVIVFVDDILIYSRSLEEHKQHLVTTLGTLRRHQLYGKLDKSEFWLTEVNFLGHVVSEA 893
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
GI VD K+EA+ +W++P NVFE+RSFLGLA Y RRFVE FS +AAP+T+LTRK VKF W
Sbjct: 894 GIAVDHSKVEAIQEWQRPTNVFEVRSFLGLAGYYRRFVEDFSRIAAPMTQLTRKWVKFDW 953
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
ECE +FQ LK+KLT+APVL P SG ++I+ D S GLGCVLMQ G+VV YASRQLK
Sbjct: 954 NEECENAFQELKQKLTTAPVLTAPISGELFMIYCDASTVGLGCVLMQQGKVVAYASRQLK 1013
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE+NY HDLELAA+VFALK W HYLY EKFE++SDHKSL+YIFTQ+DLN RQ RWME
Sbjct: 1014 QHERNYLAHDLELAAMVFALKTWIHYLYGEKFEVYSDHKSLKYIFTQKDLNSRQRRWMET 1073
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKS 1772
++DY+F L YHPGKANVVADALSRKS
Sbjct: 1074 LEDYDFALHYHPGKANVVADALSRKS 1099
Score = 362 bits (930), Expect(3) = 0.0
Identities = 178/322 (55%), Positives = 239/322 (74%), Gaps = 6/322 (1%)
Frame = -3
Query: 1763 LACLGLHTWKLYEAVEGLSL----EDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEIC 1596
L LGL +++Y +E L E +G ++S I +P++IQ IVE Q + + L ++
Sbjct: 1103 LFSLGLREFEMYAVIEDFELCLVQEGRGPCLYS--ISARPMVIQRIVEAQVHDEFLEKVK 1160
Query: 1595 RKFFDGTGPDG*EIQSD*GLRYSRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDL 1422
+ G + + D +R+ RL VP L+ +++ +AH++KY+IHPG++KMY+DL
Sbjct: 1161 AQLVAGEIDENWSMYEDGSVRFKGRLCVPKDVELRNELLADAHRAKYTIHPGNTKMYQDL 1220
Query: 1421 RRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPR 1242
+RQF WSGMK+DIA++V+ C CQQV EH+ P+ LLQPL + +WKW++ITM FV GLPR
Sbjct: 1221 KRQFXWSGMKRDIAQFVANCQICQQVKAEHQRPAELLQPLPIPKWKWDNITMDFVIGLPR 1280
Query: 1241 TTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFT 1062
T S + VW IVDRLTKSAHFL +K TD++ +L++LY++EIVRLHG+P+SIVSDRDP+FT
Sbjct: 1281 TRSKKNGVWVIVDRLTKSAHFLAMKTTDSMNSLAKLYIQEIVRLHGIPVSIVSDRDPKFT 1340
Query: 1061 SMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEF 882
S FW S Q+A+ T L+FST FHPQTDG+SERVIQILEDMLRAC LDF G+W D LPL EF
Sbjct: 1341 SQFWQSLQRALGTQLNFSTVFHPQTDGQSERVIQILEDMLRACVLDFGGNWADYLPLAEF 1400
Query: 881 SYNNSYQASIGMAPF*ALYGRP 816
+YNN YQ+SIGMAP+ ALYGRP
Sbjct: 1401 AYNNXYQSSIGMAPYEALYGRP 1422
Score = 182 bits (463), Expect(3) = 0.0
Identities = 81/151 (53%), Positives = 117/151 (77%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C+SP+CW E+GE LLGPE V+ETTEKIQ+I+++L +Q RQK+YAD +R PL F G+
Sbjct: 1423 CRSPLCWIEMGESHLLGPEIVQETTEKIQLIKEKLKTAQDRQKNYADKRRRPLEFEEGDW 1482
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
+F++V+PR+G+ RFG KG LAPR++GPF+I KRVG V+Y+L LP Q+ VH+VFH+S+LR
Sbjct: 1483 VFVKVSPRRGIFRFGKKGKLAPRFVGPFQIDKRVGPVTYKLILPQQLSLVHDVFHVSMLR 1542
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRIL 364
PD + ++D + +++ + +Y E PLRIL
Sbjct: 1543 KCTPDPTWVVDLQDVQISEDTSYVEEPLRIL 1573
>ref|XP_007213082.1| hypothetical protein PRUPE_ppa021229mg [Prunus persica]
gi|462408947|gb|EMJ14281.1| hypothetical protein
PRUPE_ppa021229mg [Prunus persica]
Length = 1194
Score = 386 bits (992), Expect(4) = 0.0
Identities = 179/266 (67%), Positives = 221/266 (83%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
+F++VFIDD+L+YSK+++ H +HL + + TLR QLYAKFSKC+FW+ V FLGHV++ +
Sbjct: 412 RFVIVFIDDILVYSKSQKAHMKHLNLVLRTLRRRQLYAKFSKCQFWLDRVSFLGHVISAE 471
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
GI VDP KIEAV+ W +P +V EIRSFLGLA Y RRFVEGFS++AAPLT LTRKGVKFVW
Sbjct: 472 GIYVDPQKIEAVVNWLRPTSVTEIRSFLGLAGYYRRFVEGFSTIAAPLTYLTRKGVKFVW 531
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
+CE SF LK +LT+APVL P+ +VI+SD S +GLGCVLMQHGRV+ YASRQLK
Sbjct: 532 SDKCEESFIELKTRLTTAPVLALPDDSGNFVIYSDASQQGLGCVLMQHGRVIAYASRQLK 591
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE NYP HDLELAA+VFALKIWRHYLY E +IF+DHKSL+Y+FTQ++LNLRQ RW+E
Sbjct: 592 KHELNYPVHDLELAAVVFALKIWRHYLYGETCQIFTDHKSLKYLFTQKELNLRQRRWLEL 651
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKS 1772
IKDY+ +++HPG+ANVVADALSRKS
Sbjct: 652 IKDYDCTIEHHPGRANVVADALSRKS 677
Score = 333 bits (855), Expect(4) = 0.0
Identities = 166/301 (55%), Positives = 216/301 (71%), Gaps = 2/301 (0%)
Frame = -3
Query: 1715 GLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GL 1536
GL ++++G+ + + + V+PVL++ I+ Q + + + +G D +++D L
Sbjct: 701 GLDVDNQGALLATLH--VRPVLVERILAAQSQDPLICTLRVEVANGDRTDC-SVRNDGAL 757
Query: 1535 RYSRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRC 1362
RL VP+ LKR++++EAH+S +++HPG +KMY LR +WW MKK IAEYV RC
Sbjct: 758 MVGNRLYVPNDEALKREILEEAHESAFAMHPGSTKMYHTLREHYWWPFMKKQIAEYVRRC 817
Query: 1361 LTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAH 1182
L CQQV E + PSGLLQPL + EWKWE ITM FV LP+T S D VW IVDRLTKSAH
Sbjct: 818 LICQQVKAERQKPSGLLQPLPIPEWKWERITMDFVFKLPQTQSKHDGVWVIVDRLTKSAH 877
Query: 1181 FLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTA 1002
FLP++ +L L+++++ EIVRLHGVP+SIVSDRDPRFTS FW +A T L FSTA
Sbjct: 878 FLPVRANYSLNKLAKIFIDEIVRLHGVPVSIVSDRDPRFTSRFWTKLNEAFGTQLQFSTA 937
Query: 1001 FHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYG 822
FHPQTDG+SER IQ LE MLRACAL F+G W ++LPL+EF+YNNSYQ SIGM+PF ALYG
Sbjct: 938 FHPQTDGQSERTIQTLEHMLRACALQFRGDWDEKLPLMEFAYNNSYQVSIGMSPFDALYG 997
Query: 821 R 819
R
Sbjct: 998 R 998
Score = 184 bits (466), Expect(4) = 0.0
Identities = 87/175 (49%), Positives = 126/175 (72%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P WDEVGE L+ E V T +++QII++RL +Q RQKSYADN+R L F VG+
Sbjct: 1000 CRTPFYWDEVGEHRLVVSEDVELTKKQVQIIRERLKTAQDRQKSYADNRRKDLQFEVGDW 1059
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
+FL+++P KGVVRFG +G L+PRYIGP+ II+ VG V+Y L LP+ + ++H+VFH+S+LR
Sbjct: 1060 VFLKLSPWKGVVRFGKRGKLSPRYIGPYEIIECVGPVAYRLTLPSDLARLHDVFHVSMLR 1119
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWKYRMV 292
Y D SH+++ + +E++ TY E P++ILD K QVLR++ VK LW+ V
Sbjct: 1120 KYISDPSHVLEEQPVELEADFTYVEQPVQILDWKTQVLRSREIPLVKVLWRSHTV 1174
Score = 32.7 bits (73), Expect(4) = 0.0
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLF 233
SH EEATWE E +M+E+Y LF
Sbjct: 1171 SHTVEEATWEPEDQMREQYLHLF 1193
>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
Length = 923
Score = 398 bits (1022), Expect(4) = 0.0
Identities = 185/264 (70%), Positives = 220/264 (83%)
Frame = -1
Query: 2566 FIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDG 2387
F++VFIDD+LIYSKT+ EH EHLR+ ++TLR+++LYAKFSKCEFW+ +V FLGHVV+K G
Sbjct: 141 FVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG 200
Query: 2386 ICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWG 2207
+ VDP KIEAV W +P V E+RSFLGLA Y RRFVE FS +A PLT+LTRKG FVW
Sbjct: 201 VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWS 260
Query: 2206 TECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKS 2027
CE SFQTLK+KL +APVL P+ +VI+SD S KGLGCVLMQ G+VV YASRQLKS
Sbjct: 261 KACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKS 320
Query: 2026 HEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFI 1847
HEQNYPTHDLELAA+VFALKIWRHYLY EK +IF+DHKSL+Y FTQ++LN+RQ RW+E +
Sbjct: 321 HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELV 380
Query: 1846 KDYEFNLQYHPGKANVVADALSRK 1775
KDY+ + YHPGKANVVADALSRK
Sbjct: 381 KDYDCEILYHPGKANVVADALSRK 404
Score = 310 bits (794), Expect(4) = 0.0
Identities = 159/287 (55%), Positives = 200/287 (69%), Gaps = 3/287 (1%)
Frame = -3
Query: 1670 IVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPS--VLK 1497
+ VQP L Q I++ Q N L E R + + SD GL + RRL VPS +K
Sbjct: 441 LTVQPTLRQRIIDAQSNDPYLVEK-RGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVK 499
Query: 1496 RKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWS-GMKKDIAEYVSRCLTCQQVNIEHRSPS 1320
+++ EAH S +S+HPG ++ F MK+++AE+VS+CL CQQV + P+
Sbjct: 500 TELLSEAHSSPFSMHPGSTEDVSGPEAGFIGGRNMKREVAEFVSKCLVCQQVKAPRQKPA 559
Query: 1319 GLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLS 1140
GLLQPLS+ EWKWE+++M F++GLPRT G +W +VDRLTKSAHF+P K T T +
Sbjct: 560 GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWA 619
Query: 1139 QLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQ 960
QLY+ EIVRLHGVP+SIVSDRD RFTS FW Q AM T L FSTAFHPQTDG++ER+ Q
Sbjct: 620 QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQ 679
Query: 959 ILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 819
+LEDMLRACAL+F GSW L L+EF+YNNSYQA+IGMAPF ALYGR
Sbjct: 680 VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGR 726
Score = 190 bits (483), Expect(4) = 0.0
Identities = 86/175 (49%), Positives = 122/175 (69%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C+SPVCW EVGE+ L+GPE V+ T E IQ I+ R+ +QSRQKSYAD +R L F VG+
Sbjct: 728 CRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDK 787
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
+FL+V P KGV+RF +G L+PR++GPF I++R+G V+Y L LP + VH+VFH+S+LR
Sbjct: 788 VFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 847
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWKYRMV 292
Y PD SH++D++ +E+ + +Y E P+ +L + LR K VK LW+ V
Sbjct: 848 KYVPDPSHVVDYEPLEIDENLSYVEQPVEVLARGVKTLRNKQIPLVKVLWRNHRV 902
Score = 35.4 bits (80), Expect(4) = 0.0
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLF 233
+H EEATWE E +M+ +YP+LF
Sbjct: 899 NHRVEEATWEREDDMRSRYPELF 921
>ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica]
gi|462395665|gb|EMJ01464.1| hypothetical protein
PRUPE_ppa015000mg [Prunus persica]
Length = 1493
Score = 382 bits (981), Expect(4) = 0.0
Identities = 177/265 (66%), Positives = 220/265 (83%)
Frame = -1
Query: 2566 FIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDG 2387
F++VFIDD+L+YS+T E H +HLR+ + TLR QLYAKFSKC+FW+ V FLGHV++ +G
Sbjct: 711 FVIVFIDDILVYSQTLEGHKKHLRVVLRTLRRKQLYAKFSKCQFWLDIVVFLGHVISAEG 770
Query: 2386 ICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWG 2207
I VDP K+EA++ W + +V EIRSFLGLA Y RRFVEGFSS+AAPLT+LTRK + F W
Sbjct: 771 IYVDPQKVEAIVNWVQSTSVTEIRSFLGLAGYYRRFVEGFSSIAAPLTRLTRKDIAFEWT 830
Query: 2206 TECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKS 2027
ECE SFQ LK++LT+APVL P++ +VI+SD SL+GLGCVLMQH RV+ YASRQLK
Sbjct: 831 EECEQSFQELKKRLTTAPVLALPDNAGNFVIYSDASLQGLGCVLMQHDRVIAYASRQLKK 890
Query: 2026 HEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFI 1847
HEQNYP HDLELAA+VFALKIWRHYLY E +IF+DHKSL+Y FTQR+LN+RQ RW+E I
Sbjct: 891 HEQNYPVHDLELAAVVFALKIWRHYLYGETCQIFTDHKSLKYFFTQRELNMRQRRWLELI 950
Query: 1846 KDYEFNLQYHPGKANVVADALSRKS 1772
KDY+ ++Y+PG+ANVVADALSRK+
Sbjct: 951 KDYDCTIEYYPGRANVVADALSRKT 975
Score = 322 bits (825), Expect(4) = 0.0
Identities = 168/302 (55%), Positives = 207/302 (68%), Gaps = 2/302 (0%)
Frame = -3
Query: 1718 EGLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*G 1539
+G+ LE ++ V+P+L++ I+ Q L I + G+ D I+ D
Sbjct: 996 DGVELEMTQQGGILASLHVRPILVERIIVAQLGDPTLCRIRGEVESGSRKDY-AIRGDGA 1054
Query: 1538 LRYSRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSR 1365
L RL VP LKR++++EAH S Y++HPG +KMY+ LR + W MK DIA+YVSR
Sbjct: 1055 LVTGTRLHVPKNDYLKREILEEAHCSTYTMHPGSTKMYRTLREYYSWPHMKGDIAKYVSR 1114
Query: 1364 CLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSA 1185
CL CQQV E + PSGL+QPL + EWKWE ITM FV LPRT+ G D +W IVDRLTKS
Sbjct: 1115 CLICQQVKAERQKPSGLMQPLPIPEWKWERITMDFVFKLPRTSKGHDGIWVIVDRLTKST 1174
Query: 1184 HFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFST 1005
HFLPIK+T +L L++L+V EIVRLHG P+SIVSDRD RFTS FW Q+AM T L FST
Sbjct: 1175 HFLPIKETYSLTKLAKLFVDEIVRLHGAPVSIVSDRDARFTSRFWKCLQEAMGTRLQFST 1234
Query: 1004 AFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALY 825
AFHPQTDG+SER IQ LEDMLR+C L K SW L L+EF+YNNSY ASI MAP+ ALY
Sbjct: 1235 AFHPQTDGQSERTIQTLEDMLRSCVLQMKDSWDTHLALVEFAYNNSYHASIKMAPYEALY 1294
Query: 824 GR 819
GR
Sbjct: 1295 GR 1296
Score = 196 bits (497), Expect(4) = 0.0
Identities = 85/175 (48%), Positives = 135/175 (77%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+CW+EVG++ L + ++ TTEK+++I+++L +Q RQKSYADN+ L F VG+
Sbjct: 1298 CRTPICWNEVGDKKLEKVDSIQATTEKVKMIKEKLKIAQDRQKSYADNRSKDLEFAVGDW 1357
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
+FL+++P KGV+RFG +G L+PRYIGP+ I +R+G V+Y L LPA++ +VH+VFH+S+LR
Sbjct: 1358 VFLKLSPWKGVMRFGKRGKLSPRYIGPYEITERIGPVAYRLALPAELSQVHDVFHVSMLR 1417
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWKYRMV 292
Y D SHI++++ +EV++ +YEE P++ILD KEQ+LR++ VK LW+ + V
Sbjct: 1418 KYMSDPSHILEYQPVEVEEDLSYEEQPVQILDRKEQMLRSRFIPVVKVLWRSQTV 1472
Score = 32.0 bits (71), Expect(4) = 0.0
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 289 EEATWELESEMKEKYPDLF 233
EEATWE E++M+ KYP LF
Sbjct: 1473 EEATWEPEAQMRVKYPYLF 1491
>gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1702
Score = 387 bits (995), Expect(4) = 0.0
Identities = 178/266 (66%), Positives = 218/266 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF+VVFIDD+LIYSKTKEEH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++
Sbjct: 912 KFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSG 971
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VDP +E+VL W++PK V EIRSFLGLARY RRF+E FS +A P+T+L +K VK+ W
Sbjct: 972 GVAVDPSNVESVLSWKQPKTVSEIRSFLGLARYYRRFIENFSKIARPMTRLLQKEVKYKW 1031
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
+CE SFQ LK++L +APVL+ P S G+ ++ D S GLGCVLMQ G+VV YASRQL+
Sbjct: 1032 TEDCERSFQELKKRLVTAPVLILPNSRKGFQVYCDASRHGLGCVLMQEGKVVAYASRQLR 1091
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE NYPTHDLELAA+V ALKIWRHYL+ + E+++DHKSL+YIFTQ DLN+RQ RW+E
Sbjct: 1092 PHENNYPTHDLELAAVVHALKIWRHYLFGNRTEMYTDHKSLKYIFTQPDLNMRQRRWLEL 1151
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKS 1772
IKDY+ + YHPGKANVVADALSRKS
Sbjct: 1152 IKDYDMEIHYHPGKANVVADALSRKS 1177
Score = 322 bits (826), Expect(4) = 0.0
Identities = 163/310 (52%), Positives = 212/310 (68%), Gaps = 3/310 (0%)
Frame = -3
Query: 1739 WKLYEAVEGLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG* 1560
WKL + E L+L S+ + QP L ++ E Q N D+ EI + G
Sbjct: 1189 WKLCQEFEKLNLGIV-SKGFVATLEAQPTLFDQVREAQVNDPDIQEIKKNMRRGKAIG-- 1245
Query: 1559 EIQSD*GLRY-SRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKK 1389
++ + G + R+ VP LK +M EAH++ YSIHPG +KMY+DL++QFWW+ M++
Sbjct: 1246 YVEDEQGTVWLGERICVPENKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRR 1305
Query: 1388 DIAEYVSRCLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAI 1209
+IAEYV+ C CQ+V EH+ P+GLLQPL + EWKWE I M F++GLPRT++G D++W +
Sbjct: 1306 EIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVV 1365
Query: 1208 VDRLTKSAHFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAM 1029
VDRLTK AHF+P+K T T L++LY+ +V LHGVP IVSDR +FTS FW Q M
Sbjct: 1366 VDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQVEM 1425
Query: 1028 STTLSFSTAFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIG 849
T L+FSTA+HPQTDG++ERV QILEDMLRAC LDF GSW LP EFSYNNSYQAS+
Sbjct: 1426 GTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQ 1485
Query: 848 MAPF*ALYGR 819
MAP+ ALYGR
Sbjct: 1486 MAPYEALYGR 1495
Score = 172 bits (437), Expect(4) = 0.0
Identities = 81/170 (47%), Positives = 116/170 (68%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+ WD+ GE + G + +RE EK++IIQ+RL +QSRQKSYADN+R L+F G+
Sbjct: 1497 CRTPILWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRQKSYADNRRRDLAFEEGDY 1556
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
++LRV P +GV RF +KG LAPR++GPF+I+ R GEV+Y+LELP M +H+VFH+S L+
Sbjct: 1557 VYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLK 1616
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 307
+ D IE+Q+ TY E P+RIL+ E+ R + RF K W
Sbjct: 1617 KCLRVPTEEADPDRIELQEDLTYVEKPVRILEVSERNTRNRVIRFCKVQW 1666
Score = 35.0 bits (79), Expect(4) = 0.0
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLFI 230
+H EEATWE E E+K +P LF+
Sbjct: 1668 NHSEEEATWEREDELKSAHPHLFV 1691
>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
Length = 1553
Score = 383 bits (984), Expect(3) = 0.0
Identities = 179/266 (67%), Positives = 217/266 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF+VVFIDD+LIYSK KEEH +HLR+ ++TLR++QLYAKFSKCEFW+ V FLGH ++K+
Sbjct: 739 KFVVVFIDDILIYSKNKEEHEDHLRVILQTLRDNQLYAKFSKCEFWLERVSFLGHFISKE 798
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VDP KI+AV +W PKNV +IRSFLGLA Y RRFV+ FS +A P+T L +K +F W
Sbjct: 799 GVLVDPAKIKAVSEWPTPKNVTDIRSFLGLAGYYRRFVKDFSKIAKPMTNLMKKDCRFTW 858
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
+ E +FQTLKE+LTSAPVL P GY ++SD S GLGCVLMQ+G+V+ YASRQLK
Sbjct: 859 NEDSEKAFQTLKERLTSAPVLTLPNGNEGYDVYSDASKNGLGCVLMQNGKVIAYASRQLK 918
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
+E NYPTHDLELAAIVFALKIWRHYLY IF+DHKSL+YIFTQ+DLN+RQ RW+E
Sbjct: 919 PYEVNYPTHDLELAAIVFALKIWRHYLYGVTCRIFTDHKSLKYIFTQKDLNMRQRRWLEL 978
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKS 1772
IKDY+ ++QYH GKANVVADALSRKS
Sbjct: 979 IKDYDLDIQYHEGKANVVADALSRKS 1004
Score = 317 bits (811), Expect(3) = 0.0
Identities = 152/287 (52%), Positives = 199/287 (69%), Gaps = 3/287 (1%)
Frame = -3
Query: 1670 IVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV---L 1500
+ ++P ++EI +Q L + K +G +G I D +RY R VP L
Sbjct: 1041 LTIEPNFLEEIRASQPGDVKLERVKAKLKEGKA-EGFAIHEDGSIRYKGRWCVPQKCEEL 1099
Query: 1499 KRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPS 1320
K+K+M E H + Y +HPG K+YKDL++ FWW GMK+ +AE+VS+CLTCQ+V EH+ P
Sbjct: 1100 KQKIMSEGHNTTYYVHPGGDKLYKDLKKMFWWPGMKRAVAEFVSKCLTCQKVKSEHKRPQ 1159
Query: 1319 GLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLS 1140
G +QPL + WKW+ I+M FV LPR+ G +T+W IVDRLTK+A F+P+K T ++ L+
Sbjct: 1160 GKIQPLDIPTWKWDSISMDFVVALPRSRGGNNTIWVIVDRLTKTARFIPMKDTWSMEALA 1219
Query: 1139 QLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQ 960
+ YVK ++RLHGVP SIVSD+D RF S FW Q+A + L STAFHP TDG++ER IQ
Sbjct: 1220 KAYVKNVIRLHGVPTSIVSDQDSRFLSNFWKKVQEAFGSELLMSTAFHPATDGQTERTIQ 1279
Query: 959 ILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 819
LEDMLRACAL+++GSW D L LIEFSYNNSY ASI MAPF ALYGR
Sbjct: 1280 TLEDMLRACALEYQGSWEDHLDLIEFSYNNSYHASIKMAPFEALYGR 1326
Score = 194 bits (492), Expect(3) = 0.0
Identities = 82/171 (47%), Positives = 128/171 (74%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C+SP+CW+++ E +LGP+ ++ET +++++IQ+++ +Q RQKSYAD KR +F VGE
Sbjct: 1328 CRSPLCWNDISETVVLGPDMIQETMDQVRVIQEKIKTAQDRQKSYADQKRRDENFEVGEK 1387
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
+ L+V+P KGV+RFG KG L+P++IGP+ I+ RVG+V+Y L+LP + +VHNVFH+S LR
Sbjct: 1388 VLLKVSPMKGVMRFGKKGKLSPKFIGPYEILARVGKVAYRLDLPNDLERVHNVFHVSQLR 1447
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWK 304
Y PD SH+++ + +E+ + +YEE P++ILD K + R K R VK LW+
Sbjct: 1448 RYVPDASHVLEPENVEIDETLSYEEKPVQILDRKVRSTRNKDVRIVKVLWR 1498
>emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
Length = 1481
Score = 390 bits (1002), Expect(4) = 0.0
Identities = 180/266 (67%), Positives = 218/266 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF+VVFIDD+LIYSKTKEEH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++
Sbjct: 691 KFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSG 750
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VDP +E+VL W++PK V E+RSFLGLA Y RRF+E FS +A P+T+L +K VKF W
Sbjct: 751 GVAVDPSNVESVLSWKQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKFKW 810
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
+CE SFQ LKE+L +APVL+ P+S G+ ++ D S GLGCVLMQ G+VV YASRQL+
Sbjct: 811 TEDCERSFQELKERLVTAPVLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQLR 870
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE NYPTHDLELAA+V ALKIWRHYLY + EI++DHKSL+YIFTQ DLN+RQ RW+E
Sbjct: 871 PHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLEL 930
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKS 1772
IKDY+ + YHPGKANVVADALSRKS
Sbjct: 931 IKDYDMEIHYHPGKANVVADALSRKS 956
Score = 312 bits (800), Expect(4) = 0.0
Identities = 159/309 (51%), Positives = 209/309 (67%), Gaps = 2/309 (0%)
Frame = -3
Query: 1739 WKLYEAVEGLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG* 1560
W+L + E L+L S+ + +P L +I E Q N D+ EI + G
Sbjct: 968 WELCQEFEKLNLGIV-SKGFMAALEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAVGFV 1026
Query: 1559 EIQSD*GLRYSRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKD 1386
E + + R+ VP LK +M EAH++ YSIHPG +KMY+DL++QFWW+ M+++
Sbjct: 1027 EDEQG-TVWLGERICVPENKELKVTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRRE 1085
Query: 1385 IAEYVSRCLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIV 1206
IAEYV+ C CQ+V EH+ P+GLLQPL + EWKWE I M F++GLPRT++G D++W +V
Sbjct: 1086 IAEYVALCDECQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVV 1145
Query: 1205 DRLTKSAHFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMS 1026
DRLTK AHF+P+K T T L++LY+ +V LHGVP IVSDR +FTS FW Q +
Sbjct: 1146 DRLTKVAHFIPVKTTYTGHKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSELG 1205
Query: 1025 TTLSFSTAFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGM 846
T L+FSTA+HPQTDG++ERV +ILEDMLRAC LDF GSW LP EFSYNNSYQAS+ M
Sbjct: 1206 TRLNFSTAYHPQTDGQTERVNKILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQM 1265
Query: 845 APF*ALYGR 819
+P ALYGR
Sbjct: 1266 SPNEALYGR 1274
Score = 171 bits (434), Expect(4) = 0.0
Identities = 81/170 (47%), Positives = 115/170 (67%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+ WD+ GE + G + +RE EK++IIQ+RL +QSRQKSYADN+R L F G+
Sbjct: 1276 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRQKSYADNRRRDLVFEEGDY 1335
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
++LRV P +GV RF +KG LAPR++GPF+I+ R GEV+Y+LELP M +H+VFH+S L+
Sbjct: 1336 VYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLK 1395
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 307
+ D IE+Q+ TY E P+RIL+ E+ R + RF K W
Sbjct: 1396 KCLRVPTEEADPSRIELQEDLTYVEKPVRILEVSERKTRNRVIRFCKVQW 1445
Score = 33.9 bits (76), Expect(4) = 0.0
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLF 233
+H EEATWE E E+K +P LF
Sbjct: 1447 NHSEEEATWEREDELKSAHPHLF 1469
>emb|CAH66284.1| OSIGBa0161P06.1 [Oryza sativa Indica Group]
Length = 1665
Score = 387 bits (994), Expect(4) = 0.0
Identities = 177/266 (66%), Positives = 218/266 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF+VVFIDD+LIYSKTKEEH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++
Sbjct: 875 KFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSG 934
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VDP +E+VL W++PK V E+RSFLGLA Y RRF+E FS +A P+T+L +K VK+ W
Sbjct: 935 GVAVDPSNVESVLSWKQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKYKW 994
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
+CE SFQ LK++L +APVL+ P+S G+ ++ D S GLGCVLMQ G+VV YASRQL+
Sbjct: 995 TEDCERSFQELKKRLVTAPVLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQLR 1054
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE NYPTHDLELAA+V ALKIWRHYLY + E+++DHKSL+YIFTQ DLN+RQ RW+E
Sbjct: 1055 PHENNYPTHDLELAAVVHALKIWRHYLYGNRTEVYTDHKSLKYIFTQPDLNMRQRRWLEL 1114
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKS 1772
IKDY+ + YHPGKANVVADALSRKS
Sbjct: 1115 IKDYDMEIHYHPGKANVVADALSRKS 1140
Score = 314 bits (804), Expect(4) = 0.0
Identities = 160/309 (51%), Positives = 209/309 (67%), Gaps = 2/309 (0%)
Frame = -3
Query: 1739 WKLYEAVEGLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG* 1560
W+L + E L+L S+ + +P L +I E Q N D+ EI + G
Sbjct: 1152 WELCQEFEKLNLGIV-SKGFVAALEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAIGFV 1210
Query: 1559 EIQSD*GLRYSRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKD 1386
E + + R+ VP LK +M EAH++ YSIHPG +KMY+DL++QFWW+ M+++
Sbjct: 1211 EDEQG-TVWLGERICVPENKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRRE 1269
Query: 1385 IAEYVSRCLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIV 1206
IAEYV+ C CQ+V EH+ P+GLLQPL + EWKWE I M F++GLPRT++G D++W +V
Sbjct: 1270 IAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVV 1329
Query: 1205 DRLTKSAHFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMS 1026
DRLTK AHF+P+K T T L++LY+ +V LHGVP IVSDR +FTS FW Q +
Sbjct: 1330 DRLTKVAHFIPVKTTYTGHKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSELG 1389
Query: 1025 TTLSFSTAFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGM 846
T L+FSTA+HPQTDG++ERV QILEDMLRAC LDF GSW LP EFSYNNSYQAS+ M
Sbjct: 1390 TRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQM 1449
Query: 845 APF*ALYGR 819
+P ALYGR
Sbjct: 1450 SPNEALYGR 1458
Score = 172 bits (436), Expect(4) = 0.0
Identities = 81/170 (47%), Positives = 116/170 (68%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+ WD+ GE + G + +RE EK++IIQ+RL +QSRQKSYADN+R L+F G+
Sbjct: 1460 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRQKSYADNRRRDLAFEEGDY 1519
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
++LRV P +GV RF +KG LAPR++GPF+I+ R GEV+Y+LELP M +H+VFH+S L+
Sbjct: 1520 VYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLK 1579
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 307
+ D IE+Q+ TY E P+RIL+ E+ R + RF K W
Sbjct: 1580 KCLRVPTEEADPDRIELQEDLTYVEKPVRILEVSERKTRNRVIRFCKVQW 1629
Score = 33.9 bits (76), Expect(4) = 0.0
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLF 233
+H EEATWE E E+K +P LF
Sbjct: 1631 NHSEEEATWEREDELKSAHPHLF 1653
>ref|XP_007044383.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508708318|gb|EOY00215.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1537
Score = 353 bits (905), Expect(4) = 0.0
Identities = 171/301 (56%), Positives = 219/301 (72%), Gaps = 2/301 (0%)
Frame = -3
Query: 1715 GLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GL 1536
G+ L + + VV+P L+ +I E QK+ D L + +K DG + + D L
Sbjct: 1024 GIQLNNGEDGTLLASFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGKASEF-RLSDDGTL 1082
Query: 1535 RYSRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRC 1362
R+ VP L+R +++EAH S Y++HPG +KMY+ ++ +WW GM++DIAE+V++C
Sbjct: 1083 MLRDRICVPKDDQLRRAILEEAHYSAYALHPGSTKMYRTIKESYWWPGMERDIAEFVAKC 1142
Query: 1361 LTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAH 1182
LTCQQ+ EH+ PSG LQPLS+ EWKWEH+TM FV GLPRT SG D +W IVDRLTKSAH
Sbjct: 1143 LTCQQIKAEHQKPSGTLQPLSIPEWKWEHVTMDFVLGLPRTQSGKDAIWVIVDRLTKSAH 1202
Query: 1181 FLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTA 1002
FL I T ++ L++LY+ EIVRLHGVP+SIVSDRD RFTS FW FQ+A+ T L FSTA
Sbjct: 1203 FLAIHSTYSIERLARLYIDEIVRLHGVPVSIVSDRDLRFTSRFWPKFQEALGTKLRFSTA 1262
Query: 1001 FHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYG 822
FHPQTDG+SER IQ LEDMLRAC +DF GSW LPL+EF+YNNS+Q+SIGMAP+ ALYG
Sbjct: 1263 FHPQTDGQSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSFQSSIGMAPYEALYG 1322
Query: 821 R 819
R
Sbjct: 1323 R 1323
Score = 332 bits (850), Expect(4) = 0.0
Identities = 161/239 (67%), Positives = 189/239 (79%)
Frame = -1
Query: 2488 METLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAVLKWEKPKNVFEIRSF 2309
++TLR QLYAKFSKCEFW+ EV FLGHVV+ G VDP KIEA+L+WE+P+ V EIRSF
Sbjct: 764 LQTLRERQLYAKFSKCEFWLKEVVFLGHVVSGAGTYVDPKKIEAILQWEQPRMVTEIRSF 823
Query: 2308 LGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLKEKLTSAPVLVTPESG 2129
LGLA Y RRFV+GFS +AAPLT+LTRK VK+ W CE FQ LK +LTS VL P SG
Sbjct: 824 LGLAGYYRRFVQGFSLIAAPLTRLTRKEVKYEWDDVCENRFQELKNRLTSTLVLTLPVSG 883
Query: 2128 VGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLELAAIVFALKIWRHYL 1949
+V++SD S GLGCVLMQ +V+ YASRQLK HE NYPTHDLELA +VFALKIWRHYL
Sbjct: 884 KEFVVYSDASKLGLGCVLMQDEKVIAYASRQLKKHETNYPTHDLELATVVFALKIWRHYL 943
Query: 1948 YDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHPGKANVVADALSRKS 1772
Y E+ IF DHKSL+Y+ TQ++LNLRQ +W+E IKDY+ + YHP KANVVADALSRKS
Sbjct: 944 YGERCRIFYDHKSLKYLLTQKELNLRQRQWLELIKDYDLVIDYHPRKANVVADALSRKS 1002
Score = 192 bits (488), Expect(4) = 0.0
Identities = 84/171 (49%), Positives = 124/171 (72%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+CWDEVGE L+ E + T +K+++I++RL +Q RQK+Y+D +R L F V +
Sbjct: 1325 CRTPLCWDEVGERKLVNVELIDLTNDKVKVIRERLKTAQDRQKNYSDKRRKDLEFEVDDK 1384
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
+FL+V+P KGV+RF +G L PRYIGPF II+R+G V+Y LELP ++ ++HN FH+S+L+
Sbjct: 1385 VFLKVSPWKGVIRFAKRGKLNPRYIGPFHIIERIGPVAYRLELPPELDRIHNAFHVSMLK 1444
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWK 304
Y PD SHI++ IE+ + +E P+RILD K++VLR K+ VK LWK
Sbjct: 1445 KYVPDPSHILETPPIELHEDLKFEVQPIRILDRKDRVLRNKSIPMVKVLWK 1495
Score = 30.4 bits (67), Expect(4) = 0.0
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 289 EEATWELESEMKEKYPDL 236
EE TWE+ES+M+ +YP L
Sbjct: 1500 EEMTWEVESQMRNQYPHL 1517
>gb|ABA92233.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1483
Score = 386 bits (992), Expect(4) = 0.0
Identities = 178/266 (66%), Positives = 218/266 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF+VVFIDD+LIYSKTKEEH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++
Sbjct: 693 KFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSG 752
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VDP +E+VL W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W
Sbjct: 753 GVAVDPSNVESVLSWKQPKTVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKYKW 812
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
+CE SFQ LK++L +APVL+ P+S G+ ++ D S GLGCVLMQ G+VV YASRQL+
Sbjct: 813 TEDCERSFQELKKRLVTAPVLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQLR 872
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE NYPTHDLELAA+V ALKIWRHYL+ + EI++DHKSL+YIFTQ DLN+RQ RW+E
Sbjct: 873 PHENNYPTHDLELAAVVHALKIWRHYLFGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLEL 932
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKS 1772
IKDY+ + YHPGKANVVADALSRKS
Sbjct: 933 IKDYDMEIHYHPGKANVVADALSRKS 958
Score = 317 bits (813), Expect(4) = 0.0
Identities = 159/310 (51%), Positives = 212/310 (68%), Gaps = 3/310 (0%)
Frame = -3
Query: 1739 WKLYEAVEGLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG* 1560
W+L + E L+L + + + +P L ++ E Q N D+ EI + G
Sbjct: 970 WELCQEFEKLNLGIVSNGFVAA-LEAKPTLFDQVREAQVNDPDIQEIKKNMRRGKAIG-- 1026
Query: 1559 EIQSD*GLRY-SRRLVVPSV--LKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKK 1389
++ + G + R+ VP LK +M EAH++ YSIHPG +KMY+DL++QFWW+ M++
Sbjct: 1027 YVEDEQGTVWLGERICVPENKGLKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRR 1086
Query: 1388 DIAEYVSRCLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAI 1209
+IAEYV+ C CQ+V EH+ P+GLLQPL + EWKWE I M F++GLPRT++G D++W +
Sbjct: 1087 EIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVV 1146
Query: 1208 VDRLTKSAHFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAM 1029
VDRLTK AHF+P+K T T L++LY+ +V LHGVP IVSDR +FTS FW Q M
Sbjct: 1147 VDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQLEM 1206
Query: 1028 STTLSFSTAFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIG 849
T L+FSTA+HPQTDG++ER+ QILEDMLRAC LDF GSW LP EFSYNNSYQAS+
Sbjct: 1207 GTRLNFSTAYHPQTDGQTERINQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQ 1266
Query: 848 MAPF*ALYGR 819
MAP+ ALYGR
Sbjct: 1267 MAPYEALYGR 1276
Score = 169 bits (429), Expect(4) = 0.0
Identities = 81/170 (47%), Positives = 115/170 (67%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+ WD+ GE + G + +RE EK++IIQ+RL +QSRQKSYADN+R L+F G+
Sbjct: 1278 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRQKSYADNRRRDLAFEEGDY 1337
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
++LRV P +GV RF +KG LAPR++GPF+I+ R GEV+Y+LELP M +H+VFH+S L+
Sbjct: 1338 VYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLK 1397
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 307
+ D IE+Q+ TY E P+RIL+ E+ R RF K W
Sbjct: 1398 KCLRVPTEEADPDRIELQEDLTYVEKPVRILEVTERNTRNCVIRFCKVQW 1447
Score = 33.9 bits (76), Expect(4) = 0.0
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLF 233
+H EEATWE E E+K +P LF
Sbjct: 1449 NHSEEEATWEREDELKSAHPHLF 1471
>emb|CAH66048.1| OSIGBa0131F24.2 [Oryza sativa Indica Group]
Length = 1437
Score = 382 bits (980), Expect(4) = 0.0
Identities = 177/266 (66%), Positives = 218/266 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF+VVFIDD+LIYSKTKEEH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++
Sbjct: 647 KFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLTEVKFLGHVISSG 706
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VDP +E+VL W++PK V EIRSFLGLA Y R F+E FS +A P+T L +K VK+ W
Sbjct: 707 GVAVDPSNVESVLSWKQPKTVSEIRSFLGLAGYYRGFIENFSKIARPMTCLLQKEVKYKW 766
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
+C+ SFQ LK++L +APVL+ P+S G+ ++SD S GLGCVLMQ G+VV YASRQL+
Sbjct: 767 TEDCKQSFQELKKRLVTAPVLILPDSRKGFQVYSDASRLGLGCVLMQGGKVVAYASRQLR 826
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE NYPTHDLELAA+V ALKIWRHYL+ + E+++DHKSL+YIFTQ DLN+RQ RW+E
Sbjct: 827 PHENNYPTHDLELAAVVHALKIWRHYLFGNRTEMYTDHKSLKYIFTQPDLNIRQRRWLEL 886
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKS 1772
IKDY+ +QYHPGKANVVADALSRKS
Sbjct: 887 IKDYDMEIQYHPGKANVVADALSRKS 912
Score = 321 bits (823), Expect(4) = 0.0
Identities = 162/310 (52%), Positives = 212/310 (68%), Gaps = 3/310 (0%)
Frame = -3
Query: 1739 WKLYEAVEGLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG* 1560
W+L + E L+L D S+ + QP L ++ E Q N D+ EI + G
Sbjct: 924 WELCQEFEKLNL-DIVSKGFVATLEAQPTLFDQVREAQVNDPDIQEIKKNMRRGKAIG-- 980
Query: 1559 EIQSD*GLRY-SRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKK 1389
++ + G + R+ VP LK +M EAH++ YSIHPG +KMY+DL++QFWW+ +++
Sbjct: 981 YVEDEQGTVWLGERICVPDNKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASIRR 1040
Query: 1388 DIAEYVSRCLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAI 1209
+IAEYV+ C CQ+V EH+ P+GLLQPL + EWKWE I M F++GLPRT++G D++W +
Sbjct: 1041 EIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVV 1100
Query: 1208 VDRLTKSAHFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAM 1029
VDRLTK AHF+P+K T T L++LY+ +V LHGVP IVSDR +FTS FW Q M
Sbjct: 1101 VDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQVEM 1160
Query: 1028 STTLSFSTAFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIG 849
T L+FSTA+HPQTDG+ ERV QILEDMLRAC LDF GSW LP EFSYNNSYQAS+
Sbjct: 1161 GTRLNFSTAYHPQTDGQMERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQ 1220
Query: 848 MAPF*ALYGR 819
MAP+ ALYGR
Sbjct: 1221 MAPYEALYGR 1230
Score = 170 bits (430), Expect(4) = 0.0
Identities = 80/170 (47%), Positives = 115/170 (67%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+ WD+ E + G + +RE EK++IIQ+RL +QSRQKSYADN+R L+F G+
Sbjct: 1232 CRTPLLWDQTSERQVFGTDILREAEEKVKIIQERLRVAQSRQKSYADNRRRDLAFEEGDY 1291
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
++LRV P +GV RF +KG LAPR++GPF+I+ R GEV+Y+LELP M +H+VFH+S L+
Sbjct: 1292 VYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLK 1351
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 307
+ D IE+Q+ TY E P+RIL+ E+ R + RF K W
Sbjct: 1352 KCLRAPTEEADPDRIELQEDLTYVEKPVRILEVSERNTRNRVIRFCKVQW 1401
Score = 33.9 bits (76), Expect(4) = 0.0
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLF 233
+H EEATWE E E+K +P LF
Sbjct: 1403 NHSEEEATWEREDELKSAHPHLF 1425
>prf||1510387A retrotransposon del1-46
Length = 1443
Score = 361 bits (926), Expect(4) = 0.0
Identities = 175/267 (65%), Positives = 221/267 (82%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KFIVVF+D VLIYS+T+++H HLRI+++ LRN+QLYAK SKCEFW+ +V+FLGHVV+++
Sbjct: 669 KFIVVFVDYVLIYSRTQKDHEHHLRISLQLLRNNQLYAKLSKCEFWMEKVKFLGHVVSRE 728
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
GI VDPVK++AV+ WE PKN+FEIRSFLGLA Y RRF++GFS LAA +T+LT+KG F W
Sbjct: 729 GIVVDPVKVKAVMNWELPKNIFEIRSFLGLAGYYRRFIKGFSKLAALMTQLTKKGENFNW 788
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
+ + SF LK +LT+ PVL P SG +V+++D SL GL VLMQ GRVV YASRQLK
Sbjct: 789 TKKYQNSFDELK-RLTTVPVLTIPISG-PFVVYTDASLAGLEGVLMQDGRVVAYASRQLK 846
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE NYPTHDLELA ++F LK+WRHYLY E FE++ DHKSL+YI TQ+DLNLRQ RW+E
Sbjct: 847 VHENNYPTHDLELAVVIFILKLWRHYLYGEDFELYCDHKSLKYISTQKDLNLRQ-RWIEV 905
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKSR 1769
+KD++F++ YHPGKANVVADALSRKS+
Sbjct: 906 LKDFDFSIFYHPGKANVVADALSRKSQ 932
Score = 321 bits (822), Expect(4) = 0.0
Identities = 166/311 (53%), Positives = 218/311 (70%), Gaps = 4/311 (1%)
Frame = -3
Query: 1736 KLYEAVEGLSLEDKGSEVHS--CNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG 1563
+ + +EG +L + H+ CN+ +P LI I + Q+ +L I G
Sbjct: 942 EFFVTIEGFNLLVRYDSHHTVLCNLRAKPNLINVISDAQRFDSELEAIHENIIQGKQDKD 1001
Query: 1562 *EIQSD*GLRYSRRLVVP--SVLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKK 1389
I D +R+ R LVVP ++ KV++E+H+SK++IHPG +KMY++L+ FWWSG+K+
Sbjct: 1002 WTIDRDNAVRFGR-LVVPLDQDIRTKVLEESHRSKFTIHPGSTKMYRNLKINFWWSGIKR 1060
Query: 1388 DIAEYVSRCLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAI 1209
++ EYVSRCL CQQV +H SGLLQPL V+E KWEHI M F+ G P + D++W I
Sbjct: 1061 EVVEYVSRCLICQQVKADHHHHSGLLQPLPVSE-KWEHILMDFIIGFPLSKRCHDSIWVI 1119
Query: 1208 VDRLTKSAHFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAM 1029
VDR TKSAHF+PI T + G LY+KEI+RLHG+P +IV+DRD +FTS FW S K++
Sbjct: 1120 VDRFTKSAHFIPIHTTIS-GKDLALYIKEIIRLHGIPTTIVTDRDTKFTSRFWGSL-KSL 1177
Query: 1028 STTLSFSTAFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIG 849
T L FSTAFHPQTDG SER IQILEDMLR+C+LDFKG+W + LPL+EF+YNNSYQ+SIG
Sbjct: 1178 GTELFFSTAFHPQTDG-SERTIQILEDMLRSCSLDFKGNWEEHLPLVEFAYNNSYQSSIG 1236
Query: 848 MAPF*ALYGRP 816
MAPF ALYGRP
Sbjct: 1237 MAPFEALYGRP 1247
Score = 190 bits (483), Expect(4) = 0.0
Identities = 85/172 (49%), Positives = 120/172 (69%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C+SP CW E+GE L+ PE +++TT I++I++RL A+Q RQKSY D +R PL F VG
Sbjct: 1248 CRSPTCWAEIGEHHLIRPELIQQTTNAIEVIKRRLKAAQDRQKSYTDIRRHPLEFSVGNH 1307
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
IFL V+PRKG F KG L+PRY GPF I++ + V+Y L LP + +HNVFHIS+LR
Sbjct: 1308 IFLEVSPRKGTSYFVFKGKLSPRYTGPFEILEIIWPVAYRLALPPMLSSIHNVFHISMLR 1367
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWKY 301
Y+PD SHI+DW+ + + +YEE P+++L ++ +VLR K VK LW++
Sbjct: 1368 KYEPDPSHILDWEDLRLNPDISYEEKPVQVLASESKVLRNKIILMVKVLWQH 1419
Score = 33.5 bits (75), Expect(4) = 0.0
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -1
Query: 298 HGSEEATWELESEMKEKYPDLF 233
H EEATWELE++M+E +P+LF
Sbjct: 1420 HSEEEATWELEADMQE-FPNLF 1440
>emb|CAD40208.2| OSJNBa0019J05.6 [Oryza sativa Japonica Group]
Length = 1616
Score = 382 bits (980), Expect(4) = 0.0
Identities = 174/265 (65%), Positives = 216/265 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF+VVFIDD+LIYS+TKEEH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++
Sbjct: 826 KFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAG 885
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VDP +E+V W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W
Sbjct: 886 GVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKW 945
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
ECE SFQ LK +L SAP+L+ P+ G+ ++ DVS GLGCVLMQ G+VV YASRQL+
Sbjct: 946 SEECEQSFQELKSRLISAPILILPDPKKGFQVYCDVSKLGLGCVLMQDGKVVAYASRQLR 1005
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE+NYPTHD+ELAA+V ALKIWRHYL+ + E+++DHKSL+YIFTQ DLN+RQ RW+E
Sbjct: 1006 PHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLEL 1065
Query: 1849 IKDYEFNLQYHPGKANVVADALSRK 1775
IKDY+ + YHPGKANVVADALSRK
Sbjct: 1066 IKDYDMGIHYHPGKANVVADALSRK 1090
Score = 317 bits (813), Expect(4) = 0.0
Identities = 158/283 (55%), Positives = 201/283 (71%), Gaps = 2/283 (0%)
Frame = -3
Query: 1661 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1488
+P LI ++ E Q N D+ EI + G E + + +R+ VP LK +
Sbjct: 1128 KPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQG-TVWLGKRICVPDNKDLKDAI 1186
Query: 1487 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1308
+ EAH + YSIHPG +KMY+DLR +FWW+ MK++IAEYV+ C CQ+V EH+ P+GLLQ
Sbjct: 1187 LKEAHDTLYSIHPGSTKMYQDLRERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1246
Query: 1307 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1128
PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T + L++LY+
Sbjct: 1247 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1306
Query: 1127 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 948
IV LHGVP IVSDR +FTS FW Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1307 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1366
Query: 947 MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 819
MLRACALDF GSW LP EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1367 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1409
Score = 172 bits (437), Expect(4) = 0.0
Identities = 85/172 (49%), Positives = 118/172 (68%), Gaps = 2/172 (1%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+ WD+ GE + G + +RE EK+++IQ+RL +QSR KSYADN+R LSF G+
Sbjct: 1411 CRTPLLWDQTGERQVFGTDILREAEEKVKVIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1470
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
++LRV P +GV RF +KG LAPR++GP++I R GEV+Y+LELP + VHNVFH+S L+
Sbjct: 1471 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIASRRGEVAYQLELPQSLAGVHNVFHVSQLK 1530
Query: 456 --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 307
L P E I+ IEVQ+ TY E P+RIL+T E+ R + RF K W
Sbjct: 1531 KCLRVPTEEANIE--QIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQW 1580
Score = 32.7 bits (73), Expect(4) = 0.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLF 233
+H EE+TWE E E+K +P LF
Sbjct: 1582 NHSEEESTWEREDELKSAHPHLF 1604
>gb|AAV31273.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54287633|gb|AAV31377.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1196
Score = 384 bits (987), Expect(4) = 0.0
Identities = 176/266 (66%), Positives = 218/266 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF+VVFIDD+LIYSKTKEEH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++
Sbjct: 406 KFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSG 465
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VDP +E+VL W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W
Sbjct: 466 GVAVDPSNVESVLSWKQPKTVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKYKW 525
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
+CE SFQ LK++L +APVL+ P+S G+ ++ D S GLGCV+MQ G+VV YASRQL+
Sbjct: 526 TEDCEQSFQELKKRLVTAPVLILPDSRKGFQVYCDASRLGLGCVMMQEGKVVAYASRQLR 585
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE NYPTHDLELAA+V ALKIWRHYL+ + E+++DHKSL+YIFTQ DLN+RQ RW+E
Sbjct: 586 PHENNYPTHDLELAAVVHALKIWRHYLFGNRTEMYTDHKSLKYIFTQPDLNMRQRRWLEL 645
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKS 1772
IKDY+ + YHPGKANVVADALSRKS
Sbjct: 646 IKDYDMEIHYHPGKANVVADALSRKS 671
Score = 318 bits (814), Expect(4) = 0.0
Identities = 161/310 (51%), Positives = 211/310 (68%), Gaps = 3/310 (0%)
Frame = -3
Query: 1739 WKLYEAVEGLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG* 1560
W+L + E L+L D S+ + QP L ++ E Q N D+ EI + G
Sbjct: 683 WELCQEFEKLNL-DIVSKGFVATLEAQPTLFDQVREAQVNDPDIPEIKKNMRRGKAIG-- 739
Query: 1559 EIQSD*GLRY-SRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKK 1389
++ + G + R+ VP LK +M EAH++ YSIHPG +KMY+DL++QFWW+ M++
Sbjct: 740 YVEDEQGTVWLGERICVPDNKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRR 799
Query: 1388 DIAEYVSRCLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAI 1209
+IAEYV+ C CQ+V EH+ P+GLLQPL + EWKWE I M F++GLPRT++G D++W +
Sbjct: 800 EIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVV 859
Query: 1208 VDRLTKSAHFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAM 1029
VDRL K AHF+P+K T T L++LY+ +V LHGVP IVSDR +FT FW Q M
Sbjct: 860 VDRLIKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTWKFWQKLQVEM 919
Query: 1028 STTLSFSTAFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIG 849
T L+FSTA+HPQTDG++ERV QILEDMLRAC LDF GSW LP EFSYNNSYQAS+
Sbjct: 920 GTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQ 979
Query: 848 MAPF*ALYGR 819
MAP+ ALYGR
Sbjct: 980 MAPYEALYGR 989
Score = 168 bits (426), Expect(4) = 0.0
Identities = 80/170 (47%), Positives = 115/170 (67%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+ WD+ GE + G + +RE EK++IIQ+RL +QSRQKSYADN+R L+F G+
Sbjct: 991 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRQKSYADNRRRDLAFEEGDY 1050
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
++LRV P +GV RF +KG LAP ++GPF+I+ R GEV+Y+LELP M +H+VFH+S L+
Sbjct: 1051 VYLRVTPLRGVHRFQTKGKLAPCFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLK 1110
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 307
+ D IE+Q+ TY E P+RIL+ E+ R + RF K W
Sbjct: 1111 KCLRVPTEEADPDRIELQEDLTYVEKPVRILEVSERNTRNRIIRFCKVQW 1160
Score = 33.9 bits (76), Expect(4) = 0.0
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLF 233
+H EEATWE E E+K +P LF
Sbjct: 1162 NHSEEEATWEREDELKSAHPHLF 1184
>ref|XP_007044250.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508708185|gb|EOY00082.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1515
Score = 392 bits (1008), Expect(4) = 0.0
Identities = 185/266 (69%), Positives = 220/266 (82%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF++VFIDD+L+YS+ +EHA HLRI ++TLR QLYAKFSKCEFW+ EV FLGH+V++
Sbjct: 724 KFVIVFIDDILVYSRDNDEHAAHLRIVLQTLRERQLYAKFSKCEFWLQEVVFLGHIVSRT 783
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
GI VDP K+EA+L+WE+PK V EIRSFLGLA Y RRFV+GFS +AAPLT+LTRKGVKFVW
Sbjct: 784 GIYVDPKKVEAILQWEQPKTVTEIRSFLGLAGYYRRFVQGFSLVAAPLTRLTRKGVKFVW 843
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
CE FQ LK +LTSAPVL P +G G++++SD S GLGCVLMQ +VV YASRQLK
Sbjct: 844 DDVCENRFQELKNRLTSAPVLTLPVNGKGFIVYSDASKLGLGCVLMQDEKVVAYASRQLK 903
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE NYPTHDLELAA+VFALKIWRHYLY E IF+DHKSL+Y+ TQ++LNLRQ RW+E
Sbjct: 904 RHEANYPTHDLELAAVVFALKIWRHYLYGEHCRIFTDHKSLKYLLTQKELNLRQRRWLEL 963
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKS 1772
IKDY+ + YH GKANVVADALSRKS
Sbjct: 964 IKDYDLVIDYHLGKANVVADALSRKS 989
Score = 286 bits (732), Expect(4) = 0.0
Identities = 143/287 (49%), Positives = 189/287 (65%), Gaps = 2/287 (0%)
Frame = -3
Query: 1673 NIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVP--SVL 1500
N +V+P L+ +I + Q++ D+L + +K DG G D L + R+ VP + L
Sbjct: 1025 NFIVRPSLLNQIKDIQRSDDELRKEIQKLTDG-GVSEFRFGEDNVLMFKDRVCVPEGNQL 1083
Query: 1499 KRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPS 1320
++ +M+EAH S Y++HPG +KMY+ +R +WW GMK+D+AE++++CL CQQV EH+
Sbjct: 1084 RQAIMEEAHSSAYALHPGSTKMYRTIRENYWWPGMKRDVAEFIAKCLVCQQVKAEHQRLV 1143
Query: 1319 GLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLS 1140
LQ L V EWKWEH+TM F+ GLPRT G D +W IVDRLTKSAHFL + T ++ L+
Sbjct: 1144 DTLQSLPVPEWKWEHVTMDFILGLPRTQRGKDAIWVIVDRLTKSAHFLAVHSTYSIEKLA 1203
Query: 1139 QLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQ 960
QLY+ EIVRLHGV +SIVSDRDPRFTS FW FQ+A+ T L FSTAFHPQTDG+SER IQ
Sbjct: 1204 QLYIDEIVRLHGVSVSIVSDRDPRFTSRFWPKFQEALGTKLKFSTAFHPQTDGQSERTIQ 1263
Query: 959 ILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 819
LED+ +Q+SIGMAP+ ALYGR
Sbjct: 1264 TLEDI--------------------------FQSSIGMAPYEALYGR 1284
Score = 193 bits (491), Expect(4) = 0.0
Identities = 86/171 (50%), Positives = 123/171 (71%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+CWDEVGE L+ E + T +KI++I++RL +Q RQKSYAD +R L F + +
Sbjct: 1286 CRTPLCWDEVGERKLVSVELIELTNDKIKVIRERLKVAQDRQKSYADKRRKGLEFEIDDK 1345
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
+FL+V P KG++RF +G L PRYIGPFRII+R+G V+Y LELP ++ ++HNVFH+S+L+
Sbjct: 1346 VFLKVYPWKGMIRFAKRGKLNPRYIGPFRIIERIGPVAYRLELPPELDRIHNVFHVSMLK 1405
Query: 456 LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWK 304
Y PD SH+++ IE+ D +E P+ ILD K+ VLR K+ VK LWK
Sbjct: 1406 KYVPDPSHVLEAPPIELHDDLKFEVQPVSILDRKDLVLRNKSISMVKVLWK 1456
Score = 32.0 bits (71), Expect(4) = 0.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1
Query: 289 EEATWELESEMKEKYPDLFI 230
EE TWE+E +M+ +YP LF+
Sbjct: 1461 EEMTWEVEHQMRNQYPHLFV 1480
>emb|CAH66749.1| H0409D10.7 [Oryza sativa Indica Group]
Length = 1641
Score = 385 bits (988), Expect(4) = 0.0
Identities = 177/266 (66%), Positives = 217/266 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF+VVFIDD+LIYSKTKEEH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++
Sbjct: 851 KFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSG 910
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VDP +E+VL W++PK V E+RSFLGLA Y RRF+E FS +A P+T+L +K VK+ W
Sbjct: 911 GVAVDPSNVESVLNWKQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKYKW 970
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
+CE SFQ LK++L +APVL+ P+S + ++ D S GLGCVLMQ G+VV YASRQL+
Sbjct: 971 TEDCEQSFQKLKKRLVTAPVLILPDSRKDFQVYCDASRLGLGCVLMQEGKVVAYASRQLR 1030
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE NYPTHDLELAA+V ALKIWRHYLY + EI++DHKSL+YIFTQ DLN+RQ RW+E
Sbjct: 1031 PHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLEL 1090
Query: 1849 IKDYEFNLQYHPGKANVVADALSRKS 1772
IKDY+ + YHPGKANVVADALSRKS
Sbjct: 1091 IKDYDMEIHYHPGKANVVADALSRKS 1116
Score = 314 bits (804), Expect(4) = 0.0
Identities = 160/309 (51%), Positives = 209/309 (67%), Gaps = 2/309 (0%)
Frame = -3
Query: 1739 WKLYEAVEGLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG* 1560
W+L + E L+L S+ + +P L +I E Q N D+ EI + G
Sbjct: 1128 WELCQEFEKLNLGIV-SKGFVAALEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAIGFV 1186
Query: 1559 EIQSD*GLRYSRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKD 1386
E + + R+ VP LK +M EAH++ YSIHPG +KMY+DL++QFWW+ M+++
Sbjct: 1187 EDEQG-TVWLGERICVPENKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRRE 1245
Query: 1385 IAEYVSRCLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIV 1206
IAEYV+ C CQ+V EH+ P+GLLQPL + EWKWE I M F++GLPRT++G D++W +V
Sbjct: 1246 IAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVV 1305
Query: 1205 DRLTKSAHFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMS 1026
DRLTK AHF+P+K T T L++LY+ +V LHGVP IVSDR +FTS FW Q +
Sbjct: 1306 DRLTKVAHFIPVKTTYTGHKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSELG 1365
Query: 1025 TTLSFSTAFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGM 846
T L+FSTA+HPQTDG++ERV QILEDMLRAC LDF GSW LP EFSYNNSYQAS+ M
Sbjct: 1366 TRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQM 1425
Query: 845 APF*ALYGR 819
+P ALYGR
Sbjct: 1426 SPNEALYGR 1434
Score = 170 bits (431), Expect(4) = 0.0
Identities = 84/172 (48%), Positives = 117/172 (68%), Gaps = 2/172 (1%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+ WD+ GE + G + +RE EK++IIQ+RL +QSRQKSYADN+R L F G+
Sbjct: 1436 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRQKSYADNRRRDLVFEEGDY 1495
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
++LRV P +GV RF +KG LAPR++GPF+I+ R GEV+Y+LELP M +H+VFH+S L+
Sbjct: 1496 VYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPQSMAGIHDVFHVSQLK 1555
Query: 456 --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 307
L P E D IE+Q+ TY E P+RIL+ E+ R + RF K W
Sbjct: 1556 KCLRVPTEEANPD--RIELQEDLTYVEKPIRILEVSERKTRNRVIRFCKVQW 1605
Score = 33.9 bits (76), Expect(4) = 0.0
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLF 233
+H EEATWE E E+K +P LF
Sbjct: 1607 NHSEEEATWEREDELKSAHPHLF 1629
>gb|AAN09852.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1715
Score = 380 bits (976), Expect(4) = 0.0
Identities = 172/265 (64%), Positives = 215/265 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF+VVFIDD+LIYS+TKEEH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGH+++
Sbjct: 925 KFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHIISAG 984
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VDP +E+V W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W
Sbjct: 985 GVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKW 1044
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
ECE SFQ LK +L SAP+L+ P+ G+ ++ D S GLGCVLMQ G+VV YASRQL+
Sbjct: 1045 SEECEQSFQELKSRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLR 1104
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE+NYPTHD+ELAA+V ALKIWRHYL+ + E+++DHKSL+YIFTQ DLN+RQ RW+E
Sbjct: 1105 PHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQSDLNMRQRRWLEL 1164
Query: 1849 IKDYEFNLQYHPGKANVVADALSRK 1775
IKDY+ + YHPGKANVVADALSRK
Sbjct: 1165 IKDYDMGIHYHPGKANVVADALSRK 1189
Score = 315 bits (807), Expect(4) = 0.0
Identities = 157/283 (55%), Positives = 200/283 (70%), Gaps = 2/283 (0%)
Frame = -3
Query: 1661 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1488
+P LI ++ E Q N D+ EI + G E + + R+ VP LK +
Sbjct: 1227 KPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEHG-TVWLGERICVPDNKDLKDAI 1285
Query: 1487 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1308
+ EAH + YSIHPG +KMY+DL+ +FWW+ MK++IAEYV+ C CQ+V EH+ P+GLLQ
Sbjct: 1286 LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1345
Query: 1307 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1128
PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T + L++LY+
Sbjct: 1346 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1405
Query: 1127 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 948
IV LHGVP IVSDR +FTS FW Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1406 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1465
Query: 947 MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 819
MLRACALDF GSW LP EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1466 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1508
Score = 174 bits (442), Expect(4) = 0.0
Identities = 86/172 (50%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+ WD+ GE + G + +RE EK++IIQ+RL +QSR KSYADN+R LSF G+
Sbjct: 1510 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1569
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP + VHNVFH+S L+
Sbjct: 1570 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1629
Query: 456 --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 307
L P E I+ IEVQ+ TY E P+RIL+T E+ R + RF K W
Sbjct: 1630 KCLRVPTEEANIE--QIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQW 1679
Score = 32.7 bits (73), Expect(4) = 0.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLF 233
+H EE+TWE E E+K +P LF
Sbjct: 1681 NHSEEESTWEREDELKSAHPHLF 1703
>gb|ABG65971.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1475
Score = 380 bits (976), Expect(4) = 0.0
Identities = 172/265 (64%), Positives = 215/265 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF+VVFIDD+LIYS+TKEEH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGH+++
Sbjct: 685 KFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHIISAG 744
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VDP +E+V W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W
Sbjct: 745 GVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKW 804
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
ECE SFQ LK +L SAP+L+ P+ G+ ++ D S GLGCVLMQ G+VV YASRQL+
Sbjct: 805 SEECEQSFQELKSRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLR 864
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE+NYPTHD+ELAA+V ALKIWRHYL+ + E+++DHKSL+YIFTQ DLN+RQ RW+E
Sbjct: 865 PHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQSDLNMRQRRWLEL 924
Query: 1849 IKDYEFNLQYHPGKANVVADALSRK 1775
IKDY+ + YHPGKANVVADALSRK
Sbjct: 925 IKDYDMGIHYHPGKANVVADALSRK 949
Score = 315 bits (807), Expect(4) = 0.0
Identities = 157/283 (55%), Positives = 200/283 (70%), Gaps = 2/283 (0%)
Frame = -3
Query: 1661 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1488
+P LI ++ E Q N D+ EI + G E + + R+ VP LK +
Sbjct: 987 KPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEHG-TVWLGERICVPDNKDLKDAI 1045
Query: 1487 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1308
+ EAH + YSIHPG +KMY+DL+ +FWW+ MK++IAEYV+ C CQ+V EH+ P+GLLQ
Sbjct: 1046 LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1105
Query: 1307 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1128
PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T + L++LY+
Sbjct: 1106 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1165
Query: 1127 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 948
IV LHGVP IVSDR +FTS FW Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1166 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1225
Query: 947 MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 819
MLRACALDF GSW LP EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1226 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1268
Score = 174 bits (442), Expect(4) = 0.0
Identities = 86/172 (50%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+ WD+ GE + G + +RE EK++IIQ+RL +QSR KSYADN+R LSF G+
Sbjct: 1270 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1329
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP + VHNVFH+S L+
Sbjct: 1330 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1389
Query: 456 --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 307
L P E I+ IEVQ+ TY E P+RIL+T E+ R + RF K W
Sbjct: 1390 KCLRVPTEEANIE--QIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQW 1439
Score = 32.7 bits (73), Expect(4) = 0.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLF 233
+H EE+TWE E E+K +P LF
Sbjct: 1441 NHSEEESTWEREDELKSAHPHLF 1463
>gb|AAM93458.1| putative polyprotein [Oryza sativa Japonica Group]
gi|31430677|gb|AAP52558.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1406
Score = 380 bits (975), Expect(4) = 0.0
Identities = 173/265 (65%), Positives = 215/265 (81%)
Frame = -1
Query: 2569 KFIVVFIDDVLIYSKTKEEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKD 2390
KF+VVFIDD+LIYS+TKEEH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++
Sbjct: 616 KFVVVFIDDILIYSQTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAG 675
Query: 2389 GICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVW 2210
G+ VDP +E+V W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W
Sbjct: 676 GVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKW 735
Query: 2209 GTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLK 2030
ECE SFQ LK +L SAP+L+ P+ G+ ++ D S GLGCVLMQ G+VV YASRQL+
Sbjct: 736 SEECERSFQELKSRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLR 795
Query: 2029 SHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEF 1850
HE+NYPTHD+ELAA+V ALKIWRHYL+ + E+++DHKSL+YIFTQ DLN+RQ RW+E
Sbjct: 796 PHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLEL 855
Query: 1849 IKDYEFNLQYHPGKANVVADALSRK 1775
IKDY+ + YHPGKANVVADALSRK
Sbjct: 856 IKDYDMGIHYHPGKANVVADALSRK 880
Score = 315 bits (807), Expect(4) = 0.0
Identities = 157/283 (55%), Positives = 200/283 (70%), Gaps = 2/283 (0%)
Frame = -3
Query: 1661 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1488
+P LI ++ E Q N D+ EI + G E + + R+ VP LK +
Sbjct: 918 KPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEHG-TVWLGERICVPDNKDLKDAI 976
Query: 1487 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1308
+ EAH + YSIHPG +KMY+DL+ +FWW+ MK++IAEYV+ C CQ+V EH+ P+GLLQ
Sbjct: 977 LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1036
Query: 1307 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1128
PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T + L++LY+
Sbjct: 1037 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1096
Query: 1127 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 948
IV LHGVP IVSDR +FTS FW Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1097 ARIVCLHGVPKKIVSDRGSQFTSNFWEKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1156
Query: 947 MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 819
MLRACALDF GSW LP EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1157 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1199
Score = 176 bits (445), Expect(4) = 0.0
Identities = 87/172 (50%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
Frame = -2
Query: 816 CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 637
C++P+ WD+ GE + G + +RE EK++IIQ+RL +QSR KSYADN+R LSF G+
Sbjct: 1201 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRYKSYADNRRRDLSFEEGDY 1260
Query: 636 IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 457
++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP + VHNVFH+S L+
Sbjct: 1261 VYLRVTPLRGVHRFQTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1320
Query: 456 --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 307
L P E ID IEVQ+ TY E P+RIL+T E+ R + RF K W
Sbjct: 1321 KCLRVPTEEANID--QIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQW 1370
Score = 31.6 bits (70), Expect(4) = 0.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 301 SHGSEEATWELESEMKEKYPDLF 233
+H EE+TWE E E+K +P LF
Sbjct: 1372 NHSEEESTWEREDELKSAHPLLF 1394