BLASTX nr result

ID: Papaver30_contig00042901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00042901
         (856 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006389497.1| hypothetical protein POPTR_0022s00390g [Popu...    58   1e-07
ref|XP_011048480.1| PREDICTED: replication protein A 70 kDa DNA-...    54   2e-06
ref|XP_011048485.1| PREDICTED: replication protein A 70 kDa DNA-...    54   2e-06
ref|XP_006378930.1| hypothetical protein POPTR_0009s00780g, part...    53   4e-06

>ref|XP_006389497.1| hypothetical protein POPTR_0022s00390g [Populus trichocarpa]
            gi|550312320|gb|ERP48411.1| hypothetical protein
            POPTR_0022s00390g [Populus trichocarpa]
          Length = 1748

 Score = 58.2 bits (139), Expect(2) = 1e-07
 Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
 Frame = -2

Query: 504  LFADVVGVLTSHTNLQHVKRSPSSACFMRELKLENLNGMKLNVTLWGNSTSELTRNLEAH 325
            +  DV+G L +   L+ V     +    RE  LEN+ G +L++TLWG+S  +    L  H
Sbjct: 1623 ILTDVLGRLKALQPLEQVMVCGQTLENKREFMLENIRGEELHITLWGDSARDFD-ELALH 1681

Query: 324  ELNPHPVV---AGVYVKQYLGKASLSSTNTTKIFFDLDILEVLHIRERYSR*TSPLEI 160
             L P PV+   AG  V ++ GK +L+ST T+  +F+ DI E L  +  +++   P+EI
Sbjct: 1682 NL-PSPVIIAFAGFRVTEFKGKPNLNSTTTSLWYFNPDIPECLAYKHFFAQ--LPVEI 1736



 Score = 25.8 bits (55), Expect(2) = 1e-07
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 685  NTDITPLETTSASIPRHKFNF 623
            NT IT +E  +  +PR+ FNF
Sbjct: 1588 NTKITGIEAITPHVPRYYFNF 1608


>ref|XP_011048480.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like
           isoform X1 [Populus euphratica]
           gi|743909971|ref|XP_011048481.1| PREDICTED: replication
           protein A 70 kDa DNA-binding subunit D-like isoform X1
           [Populus euphratica] gi|743909973|ref|XP_011048482.1|
           PREDICTED: replication protein A 70 kDa DNA-binding
           subunit D-like isoform X1 [Populus euphratica]
           gi|743909975|ref|XP_011048483.1| PREDICTED: replication
           protein A 70 kDa DNA-binding subunit D-like isoform X1
           [Populus euphratica] gi|743909977|ref|XP_011048484.1|
           PREDICTED: replication protein A 70 kDa DNA-binding
           subunit D-like isoform X1 [Populus euphratica]
          Length = 552

 Score = 54.3 bits (129), Expect(2) = 2e-06
 Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
 Frame = -2

Query: 504 LFADVVGVLTSHTNLQHVKRSPSSACFMRELKLENLNGMKLNVTLWGNSTSELTRNLEAH 325
           +  DV+G L +   L+ V     +    RE  LEN+ G +L +TLWG+S  +    L  H
Sbjct: 133 ILTDVLGRLKALQPLEQVMVRGQTLENKREFMLENIRGEELRITLWGDSARDF-NELALH 191

Query: 324 ELNPHPVV---AGVYVKQYLGKASLSSTNTTKIFFDLDILEVLHIRERYSR*TSPLEI 160
            L P PV+   AG  V ++ GK +L++T  +  +F+ DI E L  +  +++   P+EI
Sbjct: 192 NL-PSPVIIAFAGFRVTEFKGKPNLNNTAASLWYFNPDIPECLAYKHFFAQ--LPVEI 246



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 685 NTDITPLETTSASIPRHKFNF 623
           NT IT +E  +  +PR+ FNF
Sbjct: 98  NTKITGIEAITPHVPRYYFNF 118


>ref|XP_011048485.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like
           isoform X2 [Populus euphratica]
          Length = 507

 Score = 54.3 bits (129), Expect(2) = 2e-06
 Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
 Frame = -2

Query: 504 LFADVVGVLTSHTNLQHVKRSPSSACFMRELKLENLNGMKLNVTLWGNSTSELTRNLEAH 325
           +  DV+G L +   L+ V     +    RE  LEN+ G +L +TLWG+S  +    L  H
Sbjct: 133 ILTDVLGRLKALQPLEQVMVRGQTLENKREFMLENIRGEELRITLWGDSARDF-NELALH 191

Query: 324 ELNPHPVV---AGVYVKQYLGKASLSSTNTTKIFFDLDILEVLHIRERYSR*TSPLEI 160
            L P PV+   AG  V ++ GK +L++T  +  +F+ DI E L  +  +++   P+EI
Sbjct: 192 NL-PSPVIIAFAGFRVTEFKGKPNLNNTAASLWYFNPDIPECLAYKHFFAQ--LPVEI 246



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 685 NTDITPLETTSASIPRHKFNF 623
           NT IT +E  +  +PR+ FNF
Sbjct: 98  NTKITGIEAITPHVPRYYFNF 118


>ref|XP_006378930.1| hypothetical protein POPTR_0009s00780g, partial [Populus
           trichocarpa] gi|550330761|gb|ERP56727.1| hypothetical
           protein POPTR_0009s00780g, partial [Populus trichocarpa]
          Length = 255

 Score = 53.1 bits (126), Expect(2) = 4e-06
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
 Frame = -2

Query: 504 LFADVVGVLTSHTNLQHVKRSPSSACFMRELKLENLNGMKLNVTLWGNSTSELTRNLEAH 325
           +  DV+G L +   L+ V     +    RE  LEN+ G +L +TLWG+S  +    L  H
Sbjct: 133 ILTDVLGRLKALQPLEQVMVRGQTLENKREFMLENIRGEELRITLWGDSARDFD-ELALH 191

Query: 324 ELNPHPVV---AGVYVKQYLGKASLSSTNTTKIFFDLDILEVLHIRERYSR*TSPLEI 160
            L P PV+   AG  V ++ GK +L+ST     +F  DI E L  +  ++    P+EI
Sbjct: 192 NL-PSPVIIAFAGFRVTEFKGKPNLNSTAVFLWYFSPDIPECLAYKHFFAH--LPVEI 246



 Score = 25.8 bits (55), Expect(2) = 4e-06
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 685 NTDITPLETTSASIPRHKFNF 623
           NT IT +E  +  +PR+ FNF
Sbjct: 98  NTKITGIEAITPHVPRYYFNF 118


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