BLASTX nr result

ID: Papaver30_contig00042714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00042714
         (856 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013668803.1| PREDICTED: uncharacterized protein LOC106373...    47   2e-06
ref|XP_008232502.1| PREDICTED: putative ribonuclease H protein A...    42   3e-06
ref|XP_013687906.1| PREDICTED: uncharacterized protein LOC106391...    40   3e-06
ref|XP_009149314.1| PREDICTED: uncharacterized protein LOC103872...    44   5e-06

>ref|XP_013668803.1| PREDICTED: uncharacterized protein LOC106373132 [Brassica napus]
          Length = 1776

 Score = 46.6 bits (109), Expect(2) = 2e-06
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
 Frame = -3

Query: 224  ITKIQRSFWCGYDTSHIKLYFVSRRKICKSKMDGE*RYG---------VG*TTWRFLTKP 72
            IT     FW G      K+ +V+ +K+CK K +G   +          +G   WR +T P
Sbjct: 1251 ITSAMIEFWWGGGNGKRKIPWVAWKKLCKQKKEGGLGFHDITKFNQSLLGKQAWRIMTNP 1310

Query: 71   NAMWVEIPKARYLKNSDF 18
            N++   + K++Y +NSDF
Sbjct: 1311 NSLVARVLKSKYFENSDF 1328



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 22/66 (33%), Positives = 31/66 (46%)
 Frame = -1

Query: 430  PKKFKYKERQI*CMESLDFLTSNFSSKLSGWRQHILSSAGRTVL*KSVLSSIATLSMVAC 251
            P+ FK  +R +     L F+     S+L GW    LS  G+ VL KS+  S+   +M   
Sbjct: 1187 PECFKGSKRDL-----LSFIREKLQSRLHGWFAKTLSLGGKEVLLKSIAMSLPVYAMSIF 1241

Query: 250  ILLKGV 233
             L K V
Sbjct: 1242 KLPKDV 1247


>ref|XP_008232502.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 586

 Score = 42.0 bits (97), Expect(2) = 3e-06
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 13/76 (17%)
 Frame = -3

Query: 206 SFWCGYDTSHIKLYFVSRRKICKSKMDGE*RYGVG*TT-------------WRFLTKPNA 66
           +FW G++  H K+++ S  K+C  K  G    G+G                WR L  P+A
Sbjct: 117 NFWWGHNGEHGKIHWHSWMKLCTPKDAG----GIGFRDLHAFNKSLLAKQGWRLLRNPDA 172

Query: 65  MWVEIPKARYLKNSDF 18
           +W +I KARY  +  F
Sbjct: 173 LWAQILKARYFPDCSF 188



 Score = 37.4 bits (85), Expect(2) = 3e-06
 Identities = 18/48 (37%), Positives = 30/48 (62%)
 Frame = -1

Query: 385 SLDFLTSNFSSKLSGWRQHILSSAGRTVL*KSVLSSIATLSMVACILL 242
           +L ++    + +++GW+Q  LS AGR VL KSV +++    M +C LL
Sbjct: 57  ALAYVRDRINQRIAGWKQKFLSRAGREVLIKSVATAVPAYPM-SCFLL 103


>ref|XP_013687906.1| PREDICTED: uncharacterized protein LOC106391751 [Brassica napus]
          Length = 547

 Score = 39.7 bits (91), Expect(2) = 3e-06
 Identities = 17/52 (32%), Positives = 32/52 (61%)
 Frame = -1

Query: 388 ESLDFLTSNFSSKLSGWRQHILSSAGRTVL*KSVLSSIATLSMVACILLKGV 233
           ++L+++     +KL  W    L+ AGR VL K+V++++ T +M   +L KG+
Sbjct: 318 DALEYIKQRIRNKLDSWYNRFLTPAGREVLLKAVITALPTYTMTCFLLPKGL 369



 Score = 39.7 bits (91), Expect(2) = 3e-06
 Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
 Frame = -3

Query: 257 CMYSSKRCFQHITKIQRSFWCGYDTSHIKLYFVSRRKICKSKMDGE*RYGVG*TT----- 93
           C    K   + IT   R+FW        K+ +VS +KI  SK +G    G+G        
Sbjct: 362 CFLLPKGLIKEITACMRNFWWSGQKDRQKIPWVSWKKITASKQEG----GLGIRDLEIFN 417

Query: 92  --------WRFLTKPNAMWVEIPKARYLKNSDF 18
                   WR L  P+++   + KA+Y ++++F
Sbjct: 418 LAPLAKQGWRILRNPSSLLTRVLKAKYFRHTEF 450


>ref|XP_009149314.1| PREDICTED: uncharacterized protein LOC103872634 [Brassica rapa]
          Length = 954

 Score = 44.3 bits (103), Expect(2) = 5e-06
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
 Frame = -3

Query: 224 ITKIQRSFWCGYDTSHIKLYFVSRRKICKSKMDGE*RYG---------VG*TTWRFLTKP 72
           IT     FW G      K+ +VS +K+CK K +G   +          +G   WR ++ P
Sbjct: 449 ITSAMTEFWWGGGNGKRKIAWVSWKKLCKQKKEGGLGFHDIVKFNQSLLGKQAWRIMSNP 508

Query: 71  NAMWVEIPKARYLKNSDF 18
           N++   + K++Y  N DF
Sbjct: 509 NSLVARVLKSKYFPNVDF 526



 Score = 34.3 bits (77), Expect(2) = 5e-06
 Identities = 23/66 (34%), Positives = 32/66 (48%)
 Frame = -1

Query: 430 PKKFKYKERQI*CMESLDFLTSNFSSKLSGWRQHILSSAGRTVL*KSVLSSIATLSMVAC 251
           P+ FK  +R++     L F+     S+L GW    LS  G+ VL KSV  S+   +M   
Sbjct: 385 PECFKGSKREL-----LSFIREKLQSRLHGWFAKTLSLGGKEVLLKSVAMSLPVYAMSMF 439

Query: 250 ILLKGV 233
            L K V
Sbjct: 440 KLPKDV 445


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