BLASTX nr result
ID: Papaver30_contig00041961
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00041961
(692 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008675247.1| PREDICTED: uncharacterized protein LOC103651... 220 7e-55
ref|XP_008664109.1| PREDICTED: uncharacterized protein LOC103642... 219 2e-54
ref|XP_010669336.1| PREDICTED: copia protein isoform X2 [Beta vu... 218 4e-54
ref|XP_010669333.1| PREDICTED: copia protein isoform X1 [Beta vu... 218 4e-54
ref|XP_008666385.1| PREDICTED: uncharacterized protein LOC103645... 217 5e-54
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc... 215 2e-53
ref|NP_001042010.2| Os01g0146700 [Oryza sativa Japonica Group] g... 209 1e-51
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group... 204 3e-50
ref|XP_008671960.1| PREDICTED: uncharacterized protein LOC103649... 204 4e-50
ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040,... 202 1e-49
ref|XP_002460196.1| hypothetical protein SORBIDRAFT_02g024427, p... 202 1e-49
ref|XP_002456118.1| hypothetical protein SORBIDRAFT_03g030787, p... 201 5e-49
gb|AAA33448.1| reverse transcriptase, partial [Zea mays] 197 4e-48
pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize tr... 197 4e-48
ref|XP_008646585.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 197 5e-48
ref|XP_002440449.1| hypothetical protein SORBIDRAFT_09g001135, p... 197 7e-48
ref|XP_002453623.1| hypothetical protein SORBIDRAFT_04g009135, p... 196 9e-48
ref|XP_002444329.1| hypothetical protein SORBIDRAFT_07g020255, p... 193 1e-46
ref|XP_008680927.1| PREDICTED: uncharacterized protein LOC103656... 192 2e-46
gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subc... 187 7e-45
>ref|XP_008675247.1| PREDICTED: uncharacterized protein LOC103651388 isoform X1 [Zea mays]
Length = 1371
Score = 220 bits (560), Expect = 7e-55
Identities = 112/228 (49%), Positives = 142/228 (62%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNSS F T+G++FR SCP+TS QNGKA R+IR ND+ +L+ AS+PP YW ++
Sbjct: 728 EFDNSSTRTFLLTHGVLFRMSCPYTSPQNGKAGRIIRTTNDVIRSLLFQASMPPSYWAEA 787
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH A L NILP+K L+F++P S L P+YDHLR FGC CYPNLS T PHKLAPRS+
Sbjct: 788 LHTATLLLNILPTKTLDFSTPHSALLGSAPSYDHLRVFGCKCYPNLSTTAPHKLAPRSAL 847
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTADNSLSPTSPLI 542
C+F+G+ HH+GYRCLD +TN+II+SRHV FDE+ FPF+E S P+ AD + P +
Sbjct: 848 CIFIGYSAHHKGYRCLDPTTNRIIISRHVIFDESTFPFAEQP-SPPAAADFTFLDEIPNL 906
Query: 543 PASLAYXXXXXXXXXXXXXQQLYTPPHRRFPTTSAASSPNDSTLQSPA 686
T P PT S+A SP PA
Sbjct: 907 -----------------------TVPPIGLPTMSSAGSPGSRGAVLPA 931
>ref|XP_008664109.1| PREDICTED: uncharacterized protein LOC103642667, partial [Zea mays]
Length = 945
Score = 219 bits (557), Expect = 2e-54
Identities = 106/185 (57%), Positives = 130/185 (70%), Gaps = 1/185 (0%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNSS F TNG+ R SCP+TS QNGKAER+IR IND+ +L+ AS+PP YW ++
Sbjct: 748 EFDNSSTRAFFLTNGVHLRMSCPYTSPQNGKAERIIRTINDVVRSLLFQASIPPSYWAEA 807
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
L+ L NILP+K L F++P L+ P YDHLR FGC CYPNL AT PHKLAPRS
Sbjct: 808 LNTTTRLLNILPTKTLRFSTPHQALFGTAPVYDHLRVFGCKCYPNLLATSPHKLAPRSVL 867
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTAD-NSLSPTSPL 539
CVFLG+ HH+GYRCLD+ +NKII+SRHV FDE FPF+E S S P+ D L + P
Sbjct: 868 CVFLGYSDHHKGYRCLDIHSNKIIISRHVVFDETSFPFAEQS-STPTAEDFEFLLDSHPA 926
Query: 540 IPASL 554
+PA +
Sbjct: 927 VPAPI 931
>ref|XP_010669336.1| PREDICTED: copia protein isoform X2 [Beta vulgaris subsp. vulgaris]
Length = 953
Score = 218 bits (554), Expect = 4e-54
Identities = 104/178 (58%), Positives = 132/178 (74%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDN F F ++NG+ R SCP+TSSQNGK+ER +R IN+I TLM+HAS+PP +W +
Sbjct: 162 EFDNRPFWEFCKSNGIHLRLSCPYTSSQNGKSERKLRTINNIIRTLMAHASLPPSFWHHA 221
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
L MA YL NILPSK+L+ SP+ ILYQR P Y HLR FGCLCYP +T +KL PRS+
Sbjct: 222 LSMATYLLNILPSKLLSGKSPLQILYQRDPIYSHLRVFGCLCYPLFLSTTINKLQPRSTP 281
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTADNSLSPTSP 536
CVFLG+P +HRGY+C DLS+NKIILSRHV FDE FPF++ L +P+++ S +P
Sbjct: 282 CVFLGYPSNHRGYKCYDLSSNKIILSRHVIFDETQFPFAK--LHSPTSSTYSFLDDAP 337
>ref|XP_010669333.1| PREDICTED: copia protein isoform X1 [Beta vulgaris subsp. vulgaris]
gi|731317714|ref|XP_010669334.1| PREDICTED: copia
protein isoform X1 [Beta vulgaris subsp. vulgaris]
gi|731317716|ref|XP_010669335.1| PREDICTED: copia
protein isoform X1 [Beta vulgaris subsp. vulgaris]
Length = 977
Score = 218 bits (554), Expect = 4e-54
Identities = 104/178 (58%), Positives = 132/178 (74%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDN F F ++NG+ R SCP+TSSQNGK+ER +R IN+I TLM+HAS+PP +W +
Sbjct: 162 EFDNRPFWEFCKSNGIHLRLSCPYTSSQNGKSERKLRTINNIIRTLMAHASLPPSFWHHA 221
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
L MA YL NILPSK+L+ SP+ ILYQR P Y HLR FGCLCYP +T +KL PRS+
Sbjct: 222 LSMATYLLNILPSKLLSGKSPLQILYQRDPIYSHLRVFGCLCYPLFLSTTINKLQPRSTP 281
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTADNSLSPTSP 536
CVFLG+P +HRGY+C DLS+NKIILSRHV FDE FPF++ L +P+++ S +P
Sbjct: 282 CVFLGYPSNHRGYKCYDLSSNKIILSRHVIFDETQFPFAK--LHSPTSSTYSFLDDAP 337
>ref|XP_008666385.1| PREDICTED: uncharacterized protein LOC103645032 [Zea mays]
Length = 1155
Score = 217 bits (553), Expect = 5e-54
Identities = 115/230 (50%), Positives = 141/230 (61%), Gaps = 3/230 (1%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNSS F TNG+ R SCP+TS QNGKAER+IR IND+ +L+ AS+PP YW ++
Sbjct: 739 EFDNSSTRAFFLTNGVHLRMSCPYTSPQNGKAERIIRTINDVVRSLLFQASIPPSYWAEA 798
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
L+ L NILP+K L F++P L+ P Y+HLR FGC CYPNL AT PHKLAPRS
Sbjct: 799 LNTTTRLLNILPTKTLRFSTPHQALFGTAPVYNHLRVFGCKCYPNLLATSPHKLAPRSVL 858
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTAD-NSLSPTSPL 539
CVFLG+ HH+GYRCLD+ +NKII+SRHV FDE FPF+E S S P+ D L + P
Sbjct: 859 CVFLGYSDHHKGYRCLDIHSNKIIISRHVVFDETSFPFAEQS-STPTAEDFEFLLDSHPA 917
Query: 540 IPASLAYXXXXXXXXXXXXXQQLYTPPHRRFPTTSAASSP--NDSTLQSP 683
+PA + P R +A SSP ND L P
Sbjct: 918 VPAPIGSARFCLLPAGITD-----APAQPRAAPVAAVSSPCSNDQLLPLP 962
>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1597
Score = 215 bits (547), Expect = 2e-53
Identities = 99/170 (58%), Positives = 129/170 (75%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDN S F TNG+ R SCPHTS QNGKAER++R IN+I +L+ AS+P +WV++
Sbjct: 742 EFDNISARTFFLTNGVTMRMSCPHTSPQNGKAERILRSINNIMRSLLFQASLPGTFWVEA 801
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH A +L N P+K+L +P LY P+Y HLR FGC CYPNLSAT PHKL+PRS+
Sbjct: 802 LHTATHLINRHPTKMLQHHTPFFALYGVHPSYAHLRVFGCKCYPNLSATAPHKLSPRSTM 861
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTAD 512
C+FLG+PLHH+GYRCLD STN++I+SRHV FDE+ FP+ +++S+PS+AD
Sbjct: 862 CIFLGYPLHHKGYRCLDPSTNRVIISRHVVFDEHSFPY--ANISSPSSAD 909
>ref|NP_001042010.2| Os01g0146700 [Oryza sativa Japonica Group]
gi|255672871|dbj|BAF03924.2| Os01g0146700 [Oryza sativa
Japonica Group]
Length = 725
Score = 209 bits (533), Expect = 1e-51
Identities = 98/185 (52%), Positives = 130/185 (70%), Gaps = 7/185 (3%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNS F ++G+ FR SCP+TS QNG+AER +R +N+I +L+ A +PP YWV++
Sbjct: 213 EFDNSPARTFFLSHGVAFRMSCPYTSQQNGRAERSLRTLNNILRSLLFQACLPPVYWVEA 272
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH A L N +P+K L+ ++P LY QPTYDHLR FGC CYPN+S+T PHKLAPRSS
Sbjct: 273 LHTATLLVNRIPTKTLSSSTPYFHLYSTQPTYDHLRVFGCACYPNMSSTAPHKLAPRSSL 332
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTA-------DNSL 521
CVFLG+ H+GYRCL+L +N+II SRHV FDE+ FPF++ S S +++ DN L
Sbjct: 333 CVFLGYSSEHKGYRCLELGSNRIITSRHVVFDESFFPFADMSTSPMASSALDIFLDDNEL 392
Query: 522 SPTSP 536
+ P
Sbjct: 393 TAQPP 397
>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1679
Score = 204 bits (520), Expect = 3e-50
Identities = 96/180 (53%), Positives = 128/180 (71%), Gaps = 2/180 (1%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNS+ F TNG+ R SCPHTS QNGKAER++R +N+I +++ A +P +WV++
Sbjct: 824 EFDNSAARTFFLTNGVHLRMSCPHTSPQNGKAERILRSLNNIVRSMLFQAKLPGSFWVEA 883
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH A +L N P+K L+ +P LY P+Y HLR FGC CYPNLSAT PHKLAPRS+
Sbjct: 884 LHTATHLINRHPTKTLDRHTPHFALYGTHPSYSHLRVFGCKCYPNLSATTPHKLAPRSTM 943
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSE--SSLSNPSTADNSLSPTSP 536
CVFLG+PL+H+GYRC D +N++I+SRHV FDE+ FPF+E + +SN + D T+P
Sbjct: 944 CVFLGYPLYHKGYRCFDPLSNRVIISRHVVFDEHSFPFTELTNGVSNATDLDFLEDFTAP 1003
>ref|XP_008671960.1| PREDICTED: uncharacterized protein LOC103649473 [Zea mays]
Length = 1477
Score = 204 bits (519), Expect = 4e-50
Identities = 100/215 (46%), Positives = 138/215 (64%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNS F ++G+ R SCP+TS QNG+AER++R +N+I +L+ A +P YWV++
Sbjct: 769 EFDNSHTRAFFLSHGVHLRMSCPYTSQQNGRAERVLRTVNNIVRSLLFQAHLPAPYWVEA 828
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH A YL N+ P+ LN ++P L+ R P+YDHLR FGC CYPN+SAT HKLAPRS+
Sbjct: 829 LHTATYLLNLHPTSTLNSSTPHLALFGRPPSYDHLRVFGCKCYPNISATAAHKLAPRSTM 888
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTADNSLSPTSPLI 542
CVFLG+ H+GYRCLD+STN+II+SRHV FDE+ FPF+E +P S +
Sbjct: 889 CVFLGYSSEHKGYRCLDISTNRIIISRHVVFDESSFPFAE-------------TPPSSAL 935
Query: 543 PASLAYXXXXXXXXXXXXXQQLYTPPHRRFPTTSA 647
P +L + +Q+ PP P+++A
Sbjct: 936 PTNLDF--------LDLFSEQVPVPPIGALPSSTA 962
>ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040, partial [Sorghum
bicolor] gi|241947124|gb|EES20269.1| hypothetical protein
SORBIDRAFT_0139s002040, partial [Sorghum bicolor]
Length = 1822
Score = 202 bits (515), Expect = 1e-49
Identities = 96/183 (52%), Positives = 129/183 (70%), Gaps = 3/183 (1%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNS+ F ++G+ R SCP+TSSQNGKAERMIR ND TL+ AS+P ++W +S
Sbjct: 950 EFDNSTSRAFFLSHGVQLRMSCPYTSSQNGKAERMIRTTNDTVRTLLLQASLPARFWAES 1009
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH + YL N LPS +P L+ P YDHLR FGC CYPN +AT PHKLAPRS+
Sbjct: 1010 LHTSTYLLNRLPSAACPAPTPHHALFGTPPRYDHLRVFGCACYPNTTATAPHKLAPRSTL 1069
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTADNSLS---PTS 533
CVFLG+ H+GYRC DL++ ++++SRHV FDE++FPFS ++ + ST+++ LS PT
Sbjct: 1070 CVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDESIFPFS-TTTTPASTSEHDLSSVFPTD 1128
Query: 534 PLI 542
P++
Sbjct: 1129 PVV 1131
>ref|XP_002460196.1| hypothetical protein SORBIDRAFT_02g024427, partial [Sorghum bicolor]
gi|241923573|gb|EER96717.1| hypothetical protein
SORBIDRAFT_02g024427, partial [Sorghum bicolor]
Length = 1575
Score = 202 bits (515), Expect = 1e-49
Identities = 96/183 (52%), Positives = 129/183 (70%), Gaps = 3/183 (1%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNS+ F ++G+ R SCP+TSSQNGKAERMIR ND TL+ AS+P ++W +S
Sbjct: 703 EFDNSTSRAFFLSHGVQLRMSCPYTSSQNGKAERMIRTTNDTVRTLLLQASLPARFWAES 762
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH + YL N LPS +P L+ P YDHLR FGC CYPN +AT PHKLAPRS+
Sbjct: 763 LHTSTYLLNRLPSAACPAPTPHHALFGTPPRYDHLRVFGCACYPNTTATAPHKLAPRSTL 822
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTADNSLS---PTS 533
CVFLG+ H+GYRC DL++ ++++SRHV FDE++FPFS ++ + ST+++ LS PT
Sbjct: 823 CVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDESIFPFS-TTTTPASTSEHDLSSVFPTD 881
Query: 534 PLI 542
P++
Sbjct: 882 PVV 884
>ref|XP_002456118.1| hypothetical protein SORBIDRAFT_03g030787, partial [Sorghum bicolor]
gi|241928093|gb|EES01238.1| hypothetical protein
SORBIDRAFT_03g030787, partial [Sorghum bicolor]
Length = 1567
Score = 201 bits (510), Expect = 5e-49
Identities = 95/183 (51%), Positives = 129/183 (70%), Gaps = 3/183 (1%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNS+ F ++G+ R SCP+TSSQNGKAERMIR ND TL+ AS+P ++W +S
Sbjct: 700 EFDNSTSRAFFLSHGVQLRMSCPYTSSQNGKAERMIRTTNDTVRTLLLQASLPARFWAES 759
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH + YL N LPS +P L+ P YDHLR FGC CYPN +AT PHKLAPRS+
Sbjct: 760 LHTSTYLLNRLPSAACPAPTPHHALFGTPPRYDHLRVFGCACYPNTTATAPHKLAPRSTL 819
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTADN---SLSPTS 533
CVFLG+ H+GYRC DL++ ++++SRHV FDE++FPFS ++ + ST+++ S+ PT
Sbjct: 820 CVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDESIFPFS-TTTTPASTSEHDLFSVFPTD 878
Query: 534 PLI 542
P++
Sbjct: 879 PVV 881
>gb|AAA33448.1| reverse transcriptase, partial [Zea mays]
Length = 700
Score = 197 bits (502), Expect = 4e-48
Identities = 95/181 (52%), Positives = 130/181 (71%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDN++ +F T+G+ R SCP+TS+QNG+AERMIR ++ L+ AS+P YW ++
Sbjct: 5 EFDNNASRSFFLTHGVQLRLSCPYTSAQNGRAERMIRTTTNMIRCLLFQASLPATYWAEA 64
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH A +L N LPSK ++ +P LY P+YDHLR FGC CYPN SAT PHKL+PRS+R
Sbjct: 65 LHTATHLLNRLPSKAVSHPTPHFALYGTTPSYDHLRVFGCACYPNTSATAPHKLSPRSTR 124
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTADNSLSPTSPLI 542
C+FLG+ H+GYRCLDL++++II SRHV FDE+VFP + S+ P T +SL + P++
Sbjct: 125 CLFLGYSPDHKGYRCLDLTSHRII-SRHVVFDEDVFPLAGST---PPTDLDSLLESDPVL 180
Query: 543 P 545
P
Sbjct: 181 P 181
>pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize transposon
(fragment)
Length = 699
Score = 197 bits (502), Expect = 4e-48
Identities = 95/181 (52%), Positives = 130/181 (71%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDN++ +F T+G+ R SCP+TS+QNG+AERMIR ++ L+ AS+P YW ++
Sbjct: 5 EFDNNASRSFFLTHGVQLRLSCPYTSAQNGRAERMIRTTTNMIRCLLFQASLPATYWAEA 64
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH A +L N LPSK ++ +P LY P+YDHLR FGC CYPN SAT PHKL+PRS+R
Sbjct: 65 LHTATHLLNRLPSKAVSHPTPHFALYGTTPSYDHLRVFGCACYPNTSATAPHKLSPRSTR 124
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTADNSLSPTSPLI 542
C+FLG+ H+GYRCLDL++++II SRHV FDE+VFP + S+ P T +SL + P++
Sbjct: 125 CLFLGYSPDHKGYRCLDLTSHRII-SRHVVFDEDVFPLAGST---PPTDLDSLLESDPVL 180
Query: 543 P 545
P
Sbjct: 181 P 181
>ref|XP_008646585.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103628087
[Zea mays]
Length = 1134
Score = 197 bits (501), Expect = 5e-48
Identities = 103/230 (44%), Positives = 140/230 (60%), Gaps = 2/230 (0%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EF N+ +F + G+ R SCP+TS QNG+AERMIR +ND+ +L+ AS+P YW ++
Sbjct: 475 EFYNNVSRDFFLSRGVHLRMSCPYTSPQNGRAERMIRTMNDVVRSLLFQASLPVSYWAEA 534
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
L A YL N LP+K + +P L+ P+YDHLR FGC CYPNL++T PHKLAPRS+R
Sbjct: 535 LGTATYLLNRLPTKAVAHPTPYFALFGVHPSYDHLRVFGCACYPNLASTTPHKLAPRSTR 594
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTAD--NSLSPTSP 536
CVFLG+ H+GYRCLDL+++++++SRHV FDE+ FPFS + ++ + D L P SP
Sbjct: 595 CVFLGYSPDHKGYRCLDLASHRVLISRHVVFDESDFPFSSAPTASHTDLDVLLDLDPVSP 654
Query: 537 LIPASLAYXXXXXXXXXXXXXQQLYTPPHRRFPTTSAASSPNDSTLQSPA 686
I S L PP PT ++P ST S A
Sbjct: 655 TIVPSF-----PAGSPTSPSRMALPAPP----PTALPRAAPTPSTPPSSA 695
>ref|XP_002440449.1| hypothetical protein SORBIDRAFT_09g001135, partial [Sorghum
bicolor] gi|241945734|gb|EES18879.1| hypothetical
protein SORBIDRAFT_09g001135, partial [Sorghum bicolor]
Length = 488
Score = 197 bits (500), Expect = 7e-48
Identities = 96/188 (51%), Positives = 123/188 (65%), Gaps = 2/188 (1%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNS+ F ++G+ R SCP+TSSQNGKAERMIR ND TL+ AS+P ++W +S
Sbjct: 15 EFDNSTSRAFFLSHGVQLRMSCPYTSSQNGKAERMIRTTNDTIRTLLLQASLPARFWAES 74
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH + YL N LPS +P L+ P YDHLR FGC CYPN +AT PHKLAPRS+
Sbjct: 75 LHTSTYLLNRLPSTACPAPTPHHALFGTPPRYDHLRVFGCACYPNTTATAPHKLAPRSTL 134
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESS--LSNPSTADNSLSPTSP 536
CVFLG+ H+GYRC DL++ ++++SRHV FDE VFPFS ++ S P S P P
Sbjct: 135 CVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDEFVFPFSTTTTPASAPDLDFFSTCPADP 194
Query: 537 LIPASLAY 560
+ L +
Sbjct: 195 VAQPPLLF 202
>ref|XP_002453623.1| hypothetical protein SORBIDRAFT_04g009135, partial [Sorghum
bicolor] gi|241933454|gb|EES06599.1| hypothetical
protein SORBIDRAFT_04g009135, partial [Sorghum bicolor]
Length = 801
Score = 196 bits (499), Expect = 9e-48
Identities = 96/188 (51%), Positives = 123/188 (65%), Gaps = 2/188 (1%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNS+ F ++G+ R SCP+TSSQNGKAERMIR ND TL+ AS+P ++W +S
Sbjct: 15 EFDNSTSRAFFLSHGVQLRMSCPYTSSQNGKAERMIRTTNDTIRTLLLQASLPARFWAES 74
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH + YL N LPS +P L+ P YDHLR FGC CYPN +AT PHKLAPRS+
Sbjct: 75 LHTSTYLLNRLPSTACPAPTPHHALFGTPPRYDHLRVFGCACYPNTTATAPHKLAPRSTL 134
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESS--LSNPSTADNSLSPTSP 536
CVFLG+ H+GYRC DL++ ++++SRHV FDE VFPFS ++ S P S P P
Sbjct: 135 CVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDEFVFPFSTTTTPASAPDLDFFSSCPADP 194
Query: 537 LIPASLAY 560
+ L +
Sbjct: 195 VAQPPLLF 202
>ref|XP_002444329.1| hypothetical protein SORBIDRAFT_07g020255, partial [Sorghum
bicolor] gi|241940679|gb|EES13824.1| hypothetical
protein SORBIDRAFT_07g020255, partial [Sorghum bicolor]
Length = 987
Score = 193 bits (490), Expect = 1e-46
Identities = 95/188 (50%), Positives = 122/188 (64%), Gaps = 2/188 (1%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNS+ F ++G+ R SCP+TS QNGKAERMIR ND TL+ AS+P ++W +S
Sbjct: 129 EFDNSTSRAFFLSHGVQLRMSCPYTSFQNGKAERMIRTTNDTIRTLLLQASLPARFWDES 188
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH + YL N LPS +P L+ P YDHLR FGC CYPN +AT PHKLAPRS+
Sbjct: 189 LHTSTYLLNHLPSTACPAPTPHHALFGTPPRYDHLRVFGCACYPNTTATAPHKLAPRSTL 248
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESS--LSNPSTADNSLSPTSP 536
CVFLG+ H+GYRC DL++ ++++SRHV FDE VFPFS ++ S P S P P
Sbjct: 249 CVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDEFVFPFSTTTTPASAPDLDFFSSCPADP 308
Query: 537 LIPASLAY 560
+ L +
Sbjct: 309 VAQPPLLF 316
>ref|XP_008680927.1| PREDICTED: uncharacterized protein LOC103656059 [Zea mays]
Length = 586
Score = 192 bits (487), Expect = 2e-46
Identities = 89/169 (52%), Positives = 117/169 (69%), Gaps = 3/169 (1%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNS+ F ++G+ R SCP+TSSQNGKAERM+R ND TL+ A +P ++W +
Sbjct: 418 EFDNSTSCAFFLSHGMHLRMSCPYTSSQNGKAERMLRTTNDTIRTLLLQAHLPARFWAEG 477
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
LH + YL N LPS +P L+ P YDHLR F C CYPN +AT PHKLAPRS+
Sbjct: 478 LHTSTYLLNRLPSTACPAPTPHQALFGTPPRYDHLRVFWCACYPNTAATAPHKLAPRSTL 537
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSL---SNP 500
CVFLG+ H+GYRC DLS++++++SRHV FDE+VFP+S ++ SNP
Sbjct: 538 CVFLGYSPDHKGYRCFDLSSHRVLISRHVVFDESVFPYSSTTTPPSSNP 586
>gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 976
Score = 187 bits (474), Expect = 7e-45
Identities = 86/170 (50%), Positives = 115/170 (67%)
Frame = +3
Query: 3 EFDNSSFLNFSQTNGLVFRFSCPHTSSQNGKAERMIRRINDITHTLMSHASVPPKYWVDS 182
EFDNS+ +F NG+ R SCPHTS QNGKAER +R +N+I +L+ AS+P +WV++
Sbjct: 316 EFDNSAARDFFLRNGVSIRMSCPHTSPQNGKAERTLRSLNNIVRSLLFQASLPASFWVEA 375
Query: 183 LHMAVYLHNILPSKVLNFTSPVSILYQRQPTYDHLRTFGCLCYPNLSATIPHKLAPRSSR 362
L+ A +L N P+K L +P LY P+YDHLR FGC CYPNLSAT +KL+PRS+
Sbjct: 376 LYTATHLINRHPTKTLKHHTPFFALYGTHPSYDHLRVFGCKCYPNLSATAANKLSPRSTL 435
Query: 363 CVFLGFPLHHRGYRCLDLSTNKIILSRHVTFDENVFPFSESSLSNPSTAD 512
CVF +P H+GYRC D N++ +SRHV FDE+ FPF+E + A+
Sbjct: 436 CVFRSYPTDHKGYRCFDPIYNRVYISRHVVFDEHSFPFAEKPFVDSCAAN 485