BLASTX nr result

ID: Papaver30_contig00041922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00041922
         (1294 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010940745.1| PREDICTED: F-box protein At5g49610-like [Ela...    55   5e-09
ref|XP_011041088.1| PREDICTED: F-box protein At5g03970-like [Pop...    55   1e-08
ref|XP_002310166.2| hypothetical protein POPTR_0007s11660g [Popu...    47   2e-06
ref|XP_011039368.1| PREDICTED: F-box protein At5g41720 [Populus ...    59   9e-06

>ref|XP_010940745.1| PREDICTED: F-box protein At5g49610-like [Elaeis guineensis]
          Length = 357

 Score = 54.7 bits (130), Expect(2) = 5e-09
 Identities = 29/59 (49%), Positives = 36/59 (61%)
 Frame = -3

Query: 239 VQSPSLDFLPTGKSITIAGSSLHGSLLCCFTNSSSTPIPSFYMCKPASREWRKIPNPKT 63
           V+  SLDFLP  K + I      G +LC  T      IP +Y+CKPA+R+WR IPNPKT
Sbjct: 91  VRPLSLDFLP--KDVKIEAVGCRGIVLC--TAQEYRGIPRYYVCKPATRQWRWIPNPKT 145



 Score = 35.0 bits (79), Expect(2) = 5e-09
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = -1

Query: 529 EDEENEVVAPEVRKLSSDAIYEILIRASFSTL-LCQSQWVCKDWQKLIICDSKFQQTHSQ 353
           ED ++    PE      DA++EIL RAS  +L  C+   VC+ W++L   D  F   H  
Sbjct: 9   EDSQSSSPLPE------DAVFEILTRASLESLPACRR--VCRQWRRLTY-DPLFTSLHCN 59

Query: 352 RI-IASGHFLK 323
           R    SG+FL+
Sbjct: 60  RTQTISGYFLQ 70


>ref|XP_011041088.1| PREDICTED: F-box protein At5g03970-like [Populus euphratica]
          Length = 415

 Score = 55.5 bits (132), Expect(2) = 1e-08
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = -3

Query: 227 SLDFLPTGKSITIAGSSLHGSLLCCFTNSSSTPIPSFYMCKPASREWRKIPNPKTTLKSF 48
           SL+FLP    + I GS+  G LLC       T  P +Y+CKP +++WR+IPNPKT   S 
Sbjct: 85  SLNFLPD--RVEIQGSTNQGILLC------RTHHPRYYVCKPTTKQWRRIPNPKTRYHSL 136

Query: 47  GIGIAV 30
             G+ V
Sbjct: 137 ATGMIV 142



 Score = 33.1 bits (74), Expect(2) = 1e-08
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -1

Query: 499 EVRKLSSDAIYEILIRASFSTLLCQSQWVCKDWQKLIICDSKFQQTHSQRI-IASGHFLK 323
           E   LSSD IYEIL R+S  T + + + + K+  + I  DS F   HS+R    SG+F++
Sbjct: 2   ESHDLSSDIIYEILTRSSMET-VGRCRVLSKECNR-ITYDSIFTNLHSERTNTVSGYFMQ 59


>ref|XP_002310166.2| hypothetical protein POPTR_0007s11660g [Populus trichocarpa]
           gi|550334679|gb|EEE90616.2| hypothetical protein
           POPTR_0007s11660g [Populus trichocarpa]
          Length = 355

 Score = 47.4 bits (111), Expect(2) = 2e-06
 Identities = 25/67 (37%), Positives = 38/67 (56%)
 Frame = -3

Query: 221 DFLPTGKSITIAGSSLHGSLLCCFTNSSSTPIPSFYMCKPASREWRKIPNPKTTLKSFGI 42
           DFLP  + + I  S+  G LLC   N S      +Y+C P+ ++W+KIPNPKT   +   
Sbjct: 86  DFLP--EHVEIVSSTNQGVLLCHAHNKSC-----YYVCIPSIQQWQKIPNPKTRYDTIEF 138

Query: 41  GIAVKLS 21
           G+ ++ S
Sbjct: 139 GLMIERS 145



 Score = 33.9 bits (76), Expect(2) = 2e-06
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
 Frame = -1

Query: 493 RKLSSDAIYEILIRASFSTLLCQSQW--VCKDWQKLIICDSKFQQTHSQRI-IASGHFLK 323
           R L  DAIYE+L R+S   +    +W  + K++ KL   +S F + HSQR  I SG F++
Sbjct: 5   RDLCRDAIYEVLTRSSMEFV---GKWRLLSKEYNKLTY-ESLFTRLHSQRTNIVSGFFIQ 60


>ref|XP_011039368.1| PREDICTED: F-box protein At5g41720 [Populus euphratica]
          Length = 225

 Score = 58.9 bits (141), Expect = 9e-06
 Identities = 28/66 (42%), Positives = 41/66 (62%)
 Frame = -3

Query: 227 SLDFLPTGKSITIAGSSLHGSLLCCFTNSSSTPIPSFYMCKPASREWRKIPNPKTTLKSF 48
           SLDFLP   S+ I  S+  G LLC     +   IP  Y+CKP +++W++IPNPKT  ++ 
Sbjct: 57  SLDFLPC--SVKIEASTNQGLLLCTHFPPTYRNIPKVYVCKPTTKQWKQIPNPKTRYRNK 114

Query: 47  GIGIAV 30
            +G+ V
Sbjct: 115 AVGMIV 120


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