BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00041605
         (2177 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009385774.1| PREDICTED: probable RNA-dependent RNA polyme...   658   0.0  
ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polyme...   658   0.0  
ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polyme...   658   0.0  
ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polyme...   649   0.0  
ref|XP_011008583.1| PREDICTED: probable RNA-dependent RNA polyme...   621   0.0  
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...   612   0.0  
ref|XP_008791530.1| PREDICTED: probable RNA-dependent RNA polyme...   645   0.0  
ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polyme...   645   0.0  
ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polyme...   634   e-179
ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polyme...   602   e-178
ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polyme...   595   e-177
ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polyme...   597   e-177
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...   624   e-176
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...   624   e-176
ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polyme...   590   e-175
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...   584   e-175
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   584   e-175
ref|XP_009352548.1| PREDICTED: probable RNA-dependent RNA polyme...   586   e-175
gb|KDO66531.1| hypothetical protein CISIN_1g001771mg [Citrus sin...   580   e-174
ref|XP_011025605.1| PREDICTED: probable RNA-dependent RNA polyme...   614   e-173

>ref|XP_009385774.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X4 [Musa
            acuminata subsp. malaccensis]
          Length = 802

 Score =  658 bits (1698), Expect = 0.0
 Identities = 360/680 (52%), Positives = 470/680 (69%), Gaps = 7/680 (1%)
 Frame = +1

Query: 1    SSVKCYFVCMDC---VDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLI 171
            S VKCYFV M+    VD +        IL  K + EAR++FMH+H +SS +KYMARFSLI
Sbjct: 104  SPVKCYFVRMESNWGVDQEKAY-----ILSDKFIHEARTVFMHIHTVSSLSKYMARFSLI 158

Query: 172  LSKTIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRN 351
            LSKTIKLDID +S+ VE I+DI C D +G I+  E+G+P IHTDGTGFIS+DLA+KCP++
Sbjct: 159  LSKTIKLDIDLSSIHVEVIDDIPCVDDNGNILCGENGDPMIHTDGTGFISEDLAMKCPQH 218

Query: 352  IFKGKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALV 531
            I++GK S  +D +K L    A E  LG  +  RS   + PLLIQFRMF+NG AVKGT L+
Sbjct: 219  IYRGKCSIPTDIQKCLGGAEALERLLGTAQC-RSLTSEVPLLIQFRMFNNGRAVKGTLLL 277

Query: 532  NKKLPPKTIQVRPSMIKVRSD--LGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSY 705
            NK LPP+TIQVR SMIKV+SD  + Y+      NS E+VATS +PKRT LS++LIVLL Y
Sbjct: 278  NKLLPPETIQVRRSMIKVKSDPNISYIQS---CNSIEIVATSNQPKRTCLSRHLIVLLHY 334

Query: 706  GGVPDGYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFLVAKMILCGIPLGESFLK 885
            GGVP  +FLELL ++L+D +     K+AALR AL YG+MDDFLV++MILCG+PL E +L+
Sbjct: 335  GGVPKEFFLELLMNSLDDAQNARYSKQAALRVALKYGDMDDFLVSRMILCGMPLDEPYLQ 394

Query: 886  ARLSVLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKH 1065
             RLS+LMR E KSLK GKLP+ D YYLMGT DPTG+LKP++VCVILE+GQVSGD+LVYKH
Sbjct: 395  FRLSILMREERKSLKTGKLPVMDCYYLMGTVDPTGLLKPNEVCVILENGQVSGDVLVYKH 454

Query: 1066 PGLHFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNP 1245
            PGLHFGD+HVLTATY ++LE +VG +KY IFFP  GPRS+ADE+ANSD DGDMYWV RN 
Sbjct: 455  PGLHFGDVHVLTATYNKDLEKFVGYSKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNS 514

Query: 1246 QLLNWFRPSTPWT-QKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFS-SNNVGVAAI 1419
            QLL +FR S PWT      + + Q KP +FS ++ LE  LF++FL  RF  SN V +A+ 
Sbjct: 515  QLLQYFRSSMPWTPTPSNMRGIQQKKPIEFSSKE-LERELFQQFLINRFKPSNTVSMASD 573

Query: 1420 CWLSLMDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAKSGKKIVIPPKLRQQKTPH 1599
            CWLS MD  LTL +  AE+ + +++K+L L +IYYDALD  KSG K+ +P +L+ +K PH
Sbjct: 574  CWLSYMDRLLTLGDECAEEKECLKEKILQLVNIYYDALDAPKSGVKVEVPIELKAEKYPH 633

Query: 1600 FMQNKSPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQ 1779
            +M+                 + NSY S SILG IFD+V + +   +     + KLP F +
Sbjct: 634  YME-----------------RSNSYTSMSILGLIFDKVSSVQT-EDPPSNGISKLPCFTE 675

Query: 1780 VVPEDRIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAP 1959
               +  +  W+++++ Y  EM+  +    +K +  D     N+ +  + QKYK +LY A 
Sbjct: 676  EPSQSCLLLWSQRYSNYLKEMKQVME---MKHETKD---SKNEMADEIIQKYKLLLYGAA 729

Query: 1960 ELDQSPRKEEDIYT*TLLPY 2019
            E D+SPRK EDI+   L  Y
Sbjct: 730  EFDESPRKLEDIWDEALAIY 749


>ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 995

 Score =  658 bits (1698), Expect = 0.0
 Identities = 360/680 (52%), Positives = 470/680 (69%), Gaps = 7/680 (1%)
 Frame = +1

Query: 1    SSVKCYFVCMDC---VDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLI 171
            S VKCYFV M+    VD +        IL  K + EAR++FMH+H +SS +KYMARFSLI
Sbjct: 297  SPVKCYFVRMESNWGVDQEKAY-----ILSDKFIHEARTVFMHIHTVSSLSKYMARFSLI 351

Query: 172  LSKTIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRN 351
            LSKTIKLDID +S+ VE I+DI C D +G I+  E+G+P IHTDGTGFIS+DLA+KCP++
Sbjct: 352  LSKTIKLDIDLSSIHVEVIDDIPCVDDNGNILCGENGDPMIHTDGTGFISEDLAMKCPQH 411

Query: 352  IFKGKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALV 531
            I++GK S  +D +K L    A E  LG  +  RS   + PLLIQFRMF+NG AVKGT L+
Sbjct: 412  IYRGKCSIPTDIQKCLGGAEALERLLGTAQC-RSLTSEVPLLIQFRMFNNGRAVKGTLLL 470

Query: 532  NKKLPPKTIQVRPSMIKVRSD--LGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSY 705
            NK LPP+TIQVR SMIKV+SD  + Y+      NS E+VATS +PKRT LS++LIVLL Y
Sbjct: 471  NKLLPPETIQVRRSMIKVKSDPNISYIQS---CNSIEIVATSNQPKRTCLSRHLIVLLHY 527

Query: 706  GGVPDGYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFLVAKMILCGIPLGESFLK 885
            GGVP  +FLELL ++L+D +     K+AALR AL YG+MDDFLV++MILCG+PL E +L+
Sbjct: 528  GGVPKEFFLELLMNSLDDAQNARYSKQAALRVALKYGDMDDFLVSRMILCGMPLDEPYLQ 587

Query: 886  ARLSVLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKH 1065
             RLS+LMR E KSLK GKLP+ D YYLMGT DPTG+LKP++VCVILE+GQVSGD+LVYKH
Sbjct: 588  FRLSILMREERKSLKTGKLPVMDCYYLMGTVDPTGLLKPNEVCVILENGQVSGDVLVYKH 647

Query: 1066 PGLHFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNP 1245
            PGLHFGD+HVLTATY ++LE +VG +KY IFFP  GPRS+ADE+ANSD DGDMYWV RN 
Sbjct: 648  PGLHFGDVHVLTATYNKDLEKFVGYSKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNS 707

Query: 1246 QLLNWFRPSTPWT-QKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFS-SNNVGVAAI 1419
            QLL +FR S PWT      + + Q KP +FS ++ LE  LF++FL  RF  SN V +A+ 
Sbjct: 708  QLLQYFRSSMPWTPTPSNMRGIQQKKPIEFSSKE-LERELFQQFLINRFKPSNTVSMASD 766

Query: 1420 CWLSLMDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAKSGKKIVIPPKLRQQKTPH 1599
            CWLS MD  LTL +  AE+ + +++K+L L +IYYDALD  KSG K+ +P +L+ +K PH
Sbjct: 767  CWLSYMDRLLTLGDECAEEKECLKEKILQLVNIYYDALDAPKSGVKVEVPIELKAEKYPH 826

Query: 1600 FMQNKSPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQ 1779
            +M+                 + NSY S SILG IFD+V + +   +     + KLP F +
Sbjct: 827  YME-----------------RSNSYTSMSILGLIFDKVSSVQT-EDPPSNGISKLPCFTE 868

Query: 1780 VVPEDRIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAP 1959
               +  +  W+++++ Y  EM+  +    +K +  D     N+ +  + QKYK +LY A 
Sbjct: 869  EPSQSCLLLWSQRYSNYLKEMKQVME---MKHETKD---SKNEMADEIIQKYKLLLYGAA 922

Query: 1960 ELDQSPRKEEDIYT*TLLPY 2019
            E D+SPRK EDI+   L  Y
Sbjct: 923  EFDESPRKLEDIWDEALAIY 942


>ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 996

 Score =  658 bits (1698), Expect = 0.0
 Identities = 360/680 (52%), Positives = 470/680 (69%), Gaps = 7/680 (1%)
 Frame = +1

Query: 1    SSVKCYFVCMDC---VDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLI 171
            S VKCYFV M+    VD +        IL  K + EAR++FMH+H +SS +KYMARFSLI
Sbjct: 298  SPVKCYFVRMESNWGVDQEKAY-----ILSDKFIHEARTVFMHIHTVSSLSKYMARFSLI 352

Query: 172  LSKTIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRN 351
            LSKTIKLDID +S+ VE I+DI C D +G I+  E+G+P IHTDGTGFIS+DLA+KCP++
Sbjct: 353  LSKTIKLDIDLSSIHVEVIDDIPCVDDNGNILCGENGDPMIHTDGTGFISEDLAMKCPQH 412

Query: 352  IFKGKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALV 531
            I++GK S  +D +K L    A E  LG  +  RS   + PLLIQFRMF+NG AVKGT L+
Sbjct: 413  IYRGKCSIPTDIQKCLGGAEALERLLGTAQC-RSLTSEVPLLIQFRMFNNGRAVKGTLLL 471

Query: 532  NKKLPPKTIQVRPSMIKVRSD--LGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSY 705
            NK LPP+TIQVR SMIKV+SD  + Y+      NS E+VATS +PKRT LS++LIVLL Y
Sbjct: 472  NKLLPPETIQVRRSMIKVKSDPNISYIQS---CNSIEIVATSNQPKRTCLSRHLIVLLHY 528

Query: 706  GGVPDGYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFLVAKMILCGIPLGESFLK 885
            GGVP  +FLELL ++L+D +     K+AALR AL YG+MDDFLV++MILCG+PL E +L+
Sbjct: 529  GGVPKEFFLELLMNSLDDAQNARYSKQAALRVALKYGDMDDFLVSRMILCGMPLDEPYLQ 588

Query: 886  ARLSVLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKH 1065
             RLS+LMR E KSLK GKLP+ D YYLMGT DPTG+LKP++VCVILE+GQVSGD+LVYKH
Sbjct: 589  FRLSILMREERKSLKTGKLPVMDCYYLMGTVDPTGLLKPNEVCVILENGQVSGDVLVYKH 648

Query: 1066 PGLHFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNP 1245
            PGLHFGD+HVLTATY ++LE +VG +KY IFFP  GPRS+ADE+ANSD DGDMYWV RN 
Sbjct: 649  PGLHFGDVHVLTATYNKDLEKFVGYSKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNS 708

Query: 1246 QLLNWFRPSTPWT-QKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFS-SNNVGVAAI 1419
            QLL +FR S PWT      + + Q KP +FS ++ LE  LF++FL  RF  SN V +A+ 
Sbjct: 709  QLLQYFRSSMPWTPTPSNMRGIQQKKPIEFSSKE-LERELFQQFLINRFKPSNTVSMASD 767

Query: 1420 CWLSLMDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAKSGKKIVIPPKLRQQKTPH 1599
            CWLS MD  LTL +  AE+ + +++K+L L +IYYDALD  KSG K+ +P +L+ +K PH
Sbjct: 768  CWLSYMDRLLTLGDECAEEKECLKEKILQLVNIYYDALDAPKSGVKVEVPIELKAEKYPH 827

Query: 1600 FMQNKSPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQ 1779
            +M+                 + NSY S SILG IFD+V + +   +     + KLP F +
Sbjct: 828  YME-----------------RSNSYTSMSILGLIFDKVSSVQT-EDPPSNGISKLPCFTE 869

Query: 1780 VVPEDRIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAP 1959
               +  +  W+++++ Y  EM+  +    +K +  D     N+ +  + QKYK +LY A 
Sbjct: 870  EPSQSCLLLWSQRYSNYLKEMKQVME---MKHETKD---SKNEMADEIIQKYKLLLYGAA 923

Query: 1960 ELDQSPRKEEDIYT*TLLPY 2019
            E D+SPRK EDI+   L  Y
Sbjct: 924  EFDESPRKLEDIWDEALAIY 943


>ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Vitis
            vinifera]
          Length = 954

 Score =  649 bits (1674), Expect = 0.0
 Identities = 347/675 (51%), Positives = 457/675 (67%), Gaps = 2/675 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLILSK 180
            SSVKCYFV M+            S L  K+V EAR +FMH H +SS  KYMARFSLILSK
Sbjct: 269  SSVKCYFVFMES-----------SALSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSK 317

Query: 181  TIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIFK 360
            T+KLD+D ++V ++ I+D   RD+DG +VY+ED +P I TDGTGFIS+DLAL+CP N+ +
Sbjct: 318  TVKLDVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCR 377

Query: 361  GKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNKK 540
            GK+ +  + ++ L+  +  E      + + ++  +PPLLIQ R+F+NG AVKGT L+N+K
Sbjct: 378  GKYMNNGNSDR-LVGNVELEGKFSELRCLETHTWEPPLLIQCRLFNNGCAVKGTLLLNRK 436

Query: 541  LPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVPD 720
            LPP+TIQ+RPSMIKV +D   ++D    NS E+  TS +P+R+ LSKYLI LLSYGGVP+
Sbjct: 437  LPPRTIQIRPSMIKVETD-PKLSDTQTVNSVEINGTSNQPRRSYLSKYLIALLSYGGVPN 495

Query: 721  GYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFLVAKMILCGIPLGESFLKARLSV 900
             YF+ LL DALED     + KRAALR +L +GEMDD +V +MIL GIP+ E FL   LS 
Sbjct: 496  EYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFLHHCLSF 555

Query: 901  LMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKHPGLHF 1080
            ++  E K L+ GKLP+ND +YLMGTADPTG LK  +VC+IL+ GQV G +LVYKHPGLHF
Sbjct: 556  MVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYKHPGLHF 615

Query: 1081 GDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLLNW 1260
            GDIHVL ATYV+ LE +VGNAKY IFFPI GPRS+ADE+ANSD DGDMYWV RN QLL +
Sbjct: 616  GDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQY 675

Query: 1261 FRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARF-SSNNVGVAAICWLSLM 1437
            FR S PW +K   ++VP  +P DFS  D LEH LF+ FL  RF +S+ +G+AA  WL  M
Sbjct: 676  FRASEPWMRKRSTRHVPSKRPTDFS-PDELEHELFQLFLTTRFQTSSAIGMAADNWLVFM 734

Query: 1438 DTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKS 1617
            D  LTL +  +++ + ++ K+L LTDIYYDALD  KSG K+ +  +L+ +K PHFM    
Sbjct: 735  DRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFM---- 790

Query: 1618 PGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFE-QVVPED 1794
                          +++SY STSILGQI+D VE+F+   NQ   E+ +LP F    VP+ 
Sbjct: 791  -------------GRESSYHSTSILGQIYDAVESFQP-ENQSTKEIWRLPLFNIDAVPQA 836

Query: 1795 RIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQS 1974
             +  W ++++ YR+EM  AL +          G   ++ +A V  KYKQILY A E ++S
Sbjct: 837  CLRSWKDRYDQYRSEMAAALQHG---------GETKDEYAAEVINKYKQILYGAAEFEES 887

Query: 1975 PRKEEDIYT*TLLPY 2019
            PR  EDI+   L  Y
Sbjct: 888  PRNLEDIFDEALAIY 902


>ref|XP_011008583.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Populus
            euphratica]
          Length = 877

 Score =  621 bits (1601), Expect(2) = 0.0
 Identities = 341/668 (51%), Positives = 455/668 (68%), Gaps = 2/668 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLILSK 180
            S VKC+FVCM+ V S D      +IL  K++ +ARS+FMHV NLSS + YMARFSLILSK
Sbjct: 188  SPVKCFFVCMESVASIDD---QDNILCGKTIRQARSVFMHVDNLSSLSNYMARFSLILSK 244

Query: 181  TIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIFK 360
            T+ L++D + V ++ I D  CRD+DG  VY  DG+P IHTDGTGFIS DLALKCP+   K
Sbjct: 245  TMNLEVDLSFVDIKTIADEPCRDKDGNDVYGIDGKPLIHTDGTGFISYDLALKCPKKQVK 304

Query: 361  GKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNKK 540
            G     S+ E++ +H         +E++     GDPPLLIQFR+F+NG AVKGT LVNKK
Sbjct: 305  GTCLQASNIERLHVHNEV------MEQNPECLYGDPPLLIQFRLFNNGRAVKGTFLVNKK 358

Query: 541  LPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVPD 720
            L  +T+ +RPSMIKV +D    N     NS E+V TS +PK+T LSK LI LLSYGGVP+
Sbjct: 359  LTHQTLHIRPSMIKVETDPKLSNTFS-KNSLEIVGTSSRPKKTVLSKNLIALLSYGGVPE 417

Query: 721  GYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFLVAKMILCGIPLGESFLKARLSV 900
             +F+ +L +ALED     ++K AALR AL+YG+MDD +VA MI CGIPL E +L+  LS+
Sbjct: 418  EFFMGILNNALEDAHGILSNKNAALRVALNYGDMDDNIVATMICCGIPLEEPYLQHHLSI 477

Query: 901  LMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKHPGLHF 1080
            LM+ E KSLK GKLP+ +SYYLMGTADPTG+L+  +VC+IL+ GQVSG++LVY++PGLHF
Sbjct: 478  LMKEEKKSLKGGKLPVPESYYLMGTADPTGLLESDEVCIILDCGQVSGEVLVYRNPGLHF 537

Query: 1081 GDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLLNW 1260
            GDIH+L ATYV+ELE+++GNAKY IFFP  GPRS+ADE++  D DGDM++V RNPQLL  
Sbjct: 538  GDIHILKATYVRELEDFIGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPQLLKN 597

Query: 1261 FRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFS-SNNVGVAAICWLSLM 1437
            F+ + PWT      NVP  KP++FSDE+ LE  LF+ FL  RF  S+ VGVAA  WL++M
Sbjct: 598  FKQTEPWTPSTSTPNVPNRKPSEFSDEE-LEVELFKLFLRNRFQPSSTVGVAADSWLAMM 656

Query: 1438 DTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDV-AKSGKKIVIPPKLRQQKTPHFMQNK 1614
            D  LTL     E+I  V++ +  L DIYYDALD   K G++I +P  L+ +  PHFM+  
Sbjct: 657  DRVLTLGNDCTEEIACVKENINLLIDIYYDALDAPKKGGRRIEVPEALKAELFPHFMEK- 715

Query: 1615 SPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPED 1794
                           ++ +Y+STSILG+I+D+V+A+E+  +    +V K P F+  V E 
Sbjct: 716  --------------NENKTYRSTSILGKIYDKVKAYEDM-DLSSNDVWKHPCFDDEVQER 760

Query: 1795 RIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQS 1974
             +  W   ++ YRTEM  AL    + DQ      + N+A+  V +KYK+ILY A E + S
Sbjct: 761  CLVKWRGLYDQYRTEMYSAL----LADQ------EKNEAANEVIRKYKRILYDAAEFNLS 810

Query: 1975 PRKEEDIY 1998
             R++E+I+
Sbjct: 811  KRRDEEIF 818



 Score = 50.4 bits (119), Expect(2) = 0.0
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = +3

Query: 1974 SKEGRRYIYMNALAIYHVSYDEAKRHG-VGKCYFAWKVAGQALCK-YYLTRQNDAAFMCS 2147
            SK     I+  A A+Y V+ ++AKR G V  C FAW+VAG ALC  Y L  Q +   +CS
Sbjct: 810  SKRRDEEIFEEARALYQVTCNDAKRQGAVRNCGFAWRVAGLALCTLYVLKNQGERPLICS 869

Query: 2148 KSVL 2159
             S L
Sbjct: 870  PSAL 873


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
            gi|550336519|gb|ERP59562.1| hypothetical protein
            POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score =  612 bits (1578), Expect(2) = 0.0
 Identities = 337/668 (50%), Positives = 443/668 (66%), Gaps = 2/668 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLILSK 180
            S VKC+FVCM+ V S D      +IL  K++ +ARS+FMHV NLSS + YMARFSLILSK
Sbjct: 188  SPVKCFFVCMESVASVDN---QDNILCGKTIRQARSVFMHVDNLSSLSNYMARFSLILSK 244

Query: 181  TIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIFK 360
            T+ L++D + V ++ I D  CRD+DG  VY  DG+P IHTDGTGFIS DLALKCP+N  K
Sbjct: 245  TMNLEVDLSFVDIKPIADEPCRDKDGNAVYGTDGKPLIHTDGTGFISHDLALKCPKNQVK 304

Query: 361  GKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNKK 540
            G     S+ E++ +H         +E++     GDPPLLIQFR+F+NG AVKGT LVNKK
Sbjct: 305  GTCLQASNIERLRVHNEV------MEQNPECLHGDPPLLIQFRLFNNGRAVKGTFLVNKK 358

Query: 541  LPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVPD 720
            L  +T+ VRPSMIKV +D    N     NS E+V TS +PK+T LSK LI LLSYGGVP+
Sbjct: 359  LNHRTLHVRPSMIKVETDPKLSNTFS-KNSLEIVGTSCRPKKTFLSKNLIALLSYGGVPE 417

Query: 721  GYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFLVAKMILCGIPLGESFLKARLSV 900
             +F+ +L +ALED     ++K+AALR AL+YG+MDD +VA MI CGIPL E +L+  LS+
Sbjct: 418  EFFMGILNNALEDAHGILSNKKAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQHHLSI 477

Query: 901  LMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKHPGLHF 1080
            L + E KSLK GK+P+ +SYYLMGTADPTG+L+  +VC+IL+ GQVSG++LVY++PGLHF
Sbjct: 478  LKKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQVSGEVLVYRNPGLHF 537

Query: 1081 GDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLLNW 1260
            GDIH+L ATYV+ELE++VGNAKY IFFP  GPRS+ADE++  D DGDM++V RNP+LL  
Sbjct: 538  GDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPRLLEN 597

Query: 1261 FRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFS-SNNVGVAAICWLSLM 1437
            F+ + PWT      NVP  KP++FSDE+ LE  LF+ FL  RF  S  VGVAA  WL++M
Sbjct: 598  FKQTEPWTPSTSTPNVPNRKPSEFSDEE-LEVELFKLFLRNRFQPSFTVGVAADSWLAMM 656

Query: 1438 DTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDV-AKSGKKIVIPPKLRQQKTPHFMQNK 1614
            D  LTL     E+I  V+  +  L DIYYDALD   K G+KI +P  L+ +  PHFM+  
Sbjct: 657  DRLLTLGNDCTEEIACVKKNINLLIDIYYDALDAPKKGGRKIEVPEALKAELFPHFMEK- 715

Query: 1615 SPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPED 1794
                           +  +Y+STSILG+I+D+V+A+E+                  V E 
Sbjct: 716  --------------HEKKTYRSTSILGKIYDKVKAYEDM------------DLSSNVHES 749

Query: 1795 RIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQS 1974
             +  W   +  YRTEMR+AL            G + N  +  V +KYK+ILY A E + S
Sbjct: 750  CLVKWKGLYGQYRTEMRNAL----------QAGKEKNNEANEVIKKYKEILYEAAEFNLS 799

Query: 1975 PRKEEDIY 1998
             R++E+I+
Sbjct: 800  RRRDEEIF 807



 Score = 57.0 bits (136), Expect(2) = 0.0
 Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
 Frame = +3

Query: 1995 IYMNALAIYHVSYDEAKRHG-VGKCYFAWKVAGQALCK-YYLTRQNDAAFMCSKSVL 2159
            I+  A A+Y V+Y+ AKR G VGKC FAW+VAG ALC  Y L  Q +   +CS S L
Sbjct: 806  IFEEARALYQVTYNHAKRQGAVGKCGFAWRVAGLALCTLYVLKNQEERPLICSPSAL 862


>ref|XP_008791530.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Phoenix dactylifera]
          Length = 981

 Score =  645 bits (1665), Expect = 0.0
 Identities = 353/690 (51%), Positives = 461/690 (66%), Gaps = 7/690 (1%)
 Frame = +1

Query: 1    SSVKCYFVCMD---CVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLI 171
            S VKCYFV M+    +D D+P      IL  K + EAR++FMH H +SS  KYMARFSLI
Sbjct: 279  SPVKCYFVRMESSWAMDKDEPY-----ILSDKLIHEARTIFMHAHTVSSLAKYMARFSLI 333

Query: 172  LSKTIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRN 351
            LSKTIKLDID ASV V++IEDI C D+DG IVY+EDG+PRIHTDGTGFIS+DLA+KCP N
Sbjct: 334  LSKTIKLDIDLASVHVKQIEDIPCMDEDGNIVYDEDGKPRIHTDGTGFISEDLAMKCPGN 393

Query: 352  IFKGKWSSQSDFEKILLHQ-IAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTAL 528
            IFKG      D +KIL    I E  S    +  RS   +PPLLIQFR+F +GSAVKGT L
Sbjct: 394  IFKGHCLIPGDIQKILDGSGILERDSSS--RQCRSCSAEPPLLIQFRLFKDGSAVKGTLL 451

Query: 529  VNKKLPPKTIQVRPSMIKVRSD--LGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLS 702
            ++K+LPP TI +RPSM+KV +D  + Y+      NS EVV +S +PKRT LS+ +I LL 
Sbjct: 452  IDKRLPPNTILIRPSMLKVEADPSISYIQS---CNSLEVVGSSNRPKRTFLSRNIIALLH 508

Query: 703  YGGVPDGYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFLVAKMILCGIPLGESFL 882
            YGGVP  YFLELL +AL+D +    +K+AALR AL YG+MDDFLVA+MILCGIPLGE +L
Sbjct: 509  YGGVPKEYFLELLMNALDDAQNVQYNKQAALRVALKYGDMDDFLVARMILCGIPLGEPYL 568

Query: 883  KARLSVLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYK 1062
            ++RL VL R E+K+LKEGKLP+++ YYLMG+ DPTG LKP++VC+ILE+G VSGD+LVY+
Sbjct: 569  QSRLLVLRREEMKALKEGKLPVSECYYLMGSVDPTGTLKPNEVCIILENGHVSGDVLVYR 628

Query: 1063 HPGLHFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRN 1242
             PGLHFGD+H+LTATYV++L+  VGN+KY I F   GPRS+ADE+A  D DGDMYWV RN
Sbjct: 629  QPGLHFGDMHILTATYVKDLDKIVGNSKYAILFSTKGPRSLADEMAGGDFDGDMYWVSRN 688

Query: 1243 PQLLNWFRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFS-SNNVGVAAI 1419
            PQLL +F+ S PW +      V Q KP  FS+ + LE  LFE+FL  RF  S  +G A+ 
Sbjct: 689  PQLLKYFKASKPWVRTAPRIKVTQLKPTQFSNTE-LERELFEQFLINRFKPSYTIGTASD 747

Query: 1420 CWLSLMDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAKSGKKIVIPPKLRQQKTPH 1599
            CWL  MD  LTL +  A++ + + +K+L L DIYYDALD +KSG KI +P +L+  + P+
Sbjct: 748  CWLMYMDRLLTLGDECAKQKQLLREKMLELVDIYYDALDASKSGLKIEVPSELKPDQFPN 807

Query: 1600 FMQNKSPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQ 1779
            FM+ K               KD  Y+S SI G I+++V+   +  +    E+ +LP F  
Sbjct: 808  FMEKK------------YLDKDKEYESKSIFGLIYEKVK-LSQTKDLSSNEIWQLPCFNL 854

Query: 1780 VVPEDRIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAP 1959
             +P   +  W E +  Y  EM   ++ E    +  D  +        V QKYK +LY A 
Sbjct: 855  EIPPSCLKSWKEHYTEYLAEMSQVMSMEHESKESKDWMANK------VIQKYKLMLYGAS 908

Query: 1960 ELDQSPRKEEDIYT*TLLPYIMSPTMKRSV 2049
            E ++S R+ +DI+   L  Y ++    +SV
Sbjct: 909  EFEESNRELDDIFNEALAIYHVTYEYAKSV 938


>ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Phoenix dactylifera]
          Length = 1006

 Score =  645 bits (1665), Expect = 0.0
 Identities = 353/690 (51%), Positives = 461/690 (66%), Gaps = 7/690 (1%)
 Frame = +1

Query: 1    SSVKCYFVCMD---CVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLI 171
            S VKCYFV M+    +D D+P      IL  K + EAR++FMH H +SS  KYMARFSLI
Sbjct: 304  SPVKCYFVRMESSWAMDKDEPY-----ILSDKLIHEARTIFMHAHTVSSLAKYMARFSLI 358

Query: 172  LSKTIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRN 351
            LSKTIKLDID ASV V++IEDI C D+DG IVY+EDG+PRIHTDGTGFIS+DLA+KCP N
Sbjct: 359  LSKTIKLDIDLASVHVKQIEDIPCMDEDGNIVYDEDGKPRIHTDGTGFISEDLAMKCPGN 418

Query: 352  IFKGKWSSQSDFEKILLHQ-IAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTAL 528
            IFKG      D +KIL    I E  S    +  RS   +PPLLIQFR+F +GSAVKGT L
Sbjct: 419  IFKGHCLIPGDIQKILDGSGILERDSSS--RQCRSCSAEPPLLIQFRLFKDGSAVKGTLL 476

Query: 529  VNKKLPPKTIQVRPSMIKVRSD--LGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLS 702
            ++K+LPP TI +RPSM+KV +D  + Y+      NS EVV +S +PKRT LS+ +I LL 
Sbjct: 477  IDKRLPPNTILIRPSMLKVEADPSISYIQS---CNSLEVVGSSNRPKRTFLSRNIIALLH 533

Query: 703  YGGVPDGYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFLVAKMILCGIPLGESFL 882
            YGGVP  YFLELL +AL+D +    +K+AALR AL YG+MDDFLVA+MILCGIPLGE +L
Sbjct: 534  YGGVPKEYFLELLMNALDDAQNVQYNKQAALRVALKYGDMDDFLVARMILCGIPLGEPYL 593

Query: 883  KARLSVLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYK 1062
            ++RL VL R E+K+LKEGKLP+++ YYLMG+ DPTG LKP++VC+ILE+G VSGD+LVY+
Sbjct: 594  QSRLLVLRREEMKALKEGKLPVSECYYLMGSVDPTGTLKPNEVCIILENGHVSGDVLVYR 653

Query: 1063 HPGLHFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRN 1242
             PGLHFGD+H+LTATYV++L+  VGN+KY I F   GPRS+ADE+A  D DGDMYWV RN
Sbjct: 654  QPGLHFGDMHILTATYVKDLDKIVGNSKYAILFSTKGPRSLADEMAGGDFDGDMYWVSRN 713

Query: 1243 PQLLNWFRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFS-SNNVGVAAI 1419
            PQLL +F+ S PW +      V Q KP  FS+ + LE  LFE+FL  RF  S  +G A+ 
Sbjct: 714  PQLLKYFKASKPWVRTAPRIKVTQLKPTQFSNTE-LERELFEQFLINRFKPSYTIGTASD 772

Query: 1420 CWLSLMDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAKSGKKIVIPPKLRQQKTPH 1599
            CWL  MD  LTL +  A++ + + +K+L L DIYYDALD +KSG KI +P +L+  + P+
Sbjct: 773  CWLMYMDRLLTLGDECAKQKQLLREKMLELVDIYYDALDASKSGLKIEVPSELKPDQFPN 832

Query: 1600 FMQNKSPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQ 1779
            FM+ K               KD  Y+S SI G I+++V+   +  +    E+ +LP F  
Sbjct: 833  FMEKK------------YLDKDKEYESKSIFGLIYEKVK-LSQTKDLSSNEIWQLPCFNL 879

Query: 1780 VVPEDRIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAP 1959
             +P   +  W E +  Y  EM   ++ E    +  D  +        V QKYK +LY A 
Sbjct: 880  EIPPSCLKSWKEHYTEYLAEMSQVMSMEHESKESKDWMANK------VIQKYKLMLYGAS 933

Query: 1960 ELDQSPRKEEDIYT*TLLPYIMSPTMKRSV 2049
            E ++S R+ +DI+   L  Y ++    +SV
Sbjct: 934  EFEESNRELDDIFNEALAIYHVTYEYAKSV 963


>ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Vitis
            vinifera] gi|297738765|emb|CBI28010.3| unnamed protein
            product [Vitis vinifera]
          Length = 929

 Score =  634 bits (1636), Expect = e-179
 Identities = 344/675 (50%), Positives = 446/675 (66%), Gaps = 2/675 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLILSK 180
            SSVKCYFV M+            S L  K+V EAR +FMH H +SS  KYMARFSLILSK
Sbjct: 269  SSVKCYFVFMES-----------SALSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSK 317

Query: 181  TIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIFK 360
            T+KLD+D ++V ++ I+D   RD+DG +VY+ED +P I TDGTGFIS+DLAL+CP N+ +
Sbjct: 318  TVKLDVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCR 377

Query: 361  GKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNKK 540
            GK+ +  + +                          PLLIQ R+F+NG AVKGT L+N+K
Sbjct: 378  GKYMNNGNSD--------------------------PLLIQCRLFNNGCAVKGTLLLNRK 411

Query: 541  LPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVPD 720
            LPP+TIQ+RPSMIKV +D   ++D    NS E+  TS +P+R+ LSKYLI LLSYGGVP+
Sbjct: 412  LPPRTIQIRPSMIKVETD-PKLSDTQTVNSVEINGTSNQPRRSYLSKYLIALLSYGGVPN 470

Query: 721  GYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFLVAKMILCGIPLGESFLKARLSV 900
             YF+ LL DALED     + KRAALR +L +GEMDD +V +MIL GIP+ E FL   LS 
Sbjct: 471  EYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFLHHCLSF 530

Query: 901  LMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKHPGLHF 1080
            ++  E K L+ GKLP+ND +YLMGTADPTG LK  +VC+IL+ GQV G +LVYKHPGLHF
Sbjct: 531  MVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYKHPGLHF 590

Query: 1081 GDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLLNW 1260
            GDIHVL ATYV+ LE +VGNAKY IFFPI GPRS+ADE+ANSD DGDMYWV RN QLL +
Sbjct: 591  GDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQY 650

Query: 1261 FRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARF-SSNNVGVAAICWLSLM 1437
            FR S PW +K   ++VP  +P DFS  D LEH LF+ FL  RF +S+ +G+AA  WL  M
Sbjct: 651  FRASEPWMRKRSTRHVPSKRPTDFS-PDELEHELFQLFLTTRFQTSSAIGMAADNWLVFM 709

Query: 1438 DTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKS 1617
            D  LTL +  +++ + ++ K+L LTDIYYDALD  KSG K+ +  +L+ +K PHFM    
Sbjct: 710  DRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFM---- 765

Query: 1618 PGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFE-QVVPED 1794
                          +++SY STSILGQI+D VE+F+   NQ   E+ +LP F    VP+ 
Sbjct: 766  -------------GRESSYHSTSILGQIYDAVESFQP-ENQSTKEIWRLPLFNIDAVPQA 811

Query: 1795 RIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQS 1974
             +  W ++++ YR+EM  AL +          G   ++ +A V  KYKQILY A E ++S
Sbjct: 812  CLRSWKDRYDQYRSEMAAALQHG---------GETKDEYAAEVINKYKQILYGAAEFEES 862

Query: 1975 PRKEEDIYT*TLLPY 2019
            PR  EDI+   L  Y
Sbjct: 863  PRNLEDIFDEALAIY 877


>ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1020

 Score =  602 bits (1552), Expect(2) = e-178
 Identities = 322/675 (47%), Positives = 448/675 (66%), Gaps = 2/675 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFC-KSVSEARSLFMHVHNLSSTTKYMARFSLILS 177
            +S+KCYFV  + +++ +      S +F  K  SEAR  FMHVH +S+  KY AR SLILS
Sbjct: 326  ASLKCYFVRFESIETYNH---GGSYVFAAKRTSEARCHFMHVHMVSNMAKYAARLSLILS 382

Query: 178  KTIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIF 357
            KTIKL ++ ASV +E +EDI CRD+ GCI+ +EDGEPRIHTDGTGFIS+DLA++CP++  
Sbjct: 383  KTIKLQVNLASVTIERVEDILCRDESGCIICDEDGEPRIHTDGTGFISEDLAMRCPKDFS 442

Query: 358  KGKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNK 537
            K ++    ++E  +   +  E  +   +   S   +PPLL+Q R+F NG AVKGT LVN+
Sbjct: 443  KAEYIKDENYENFV-DIVDLEDMIAERRGNGSLNKEPPLLMQCRLFKNGCAVKGTFLVNR 501

Query: 538  KLPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVP 717
            K+  + IQ+RPSM+KV +D   ++  P  NS EVVA S +P++T LSK+LI LLSYGGV 
Sbjct: 502  KIGSRKIQIRPSMVKVETD-PTISALPTFNSLEVVAISHRPRKTYLSKHLISLLSYGGVG 560

Query: 718  DGYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDD-FLVAKMILCGIPLGESFLKARL 894
            + +F+E+L  ALE+TK+ +  KRAAL+ A++Y EMDD  L A++I  G+PL E  L ARL
Sbjct: 561  NEFFMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLISSGVPLNEPHLHARL 620

Query: 895  SVLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKHPGL 1074
            S L + E   L+ GKLP++DS+YLMGTADPTG+L+ ++VCVIL+SGQVSG +LVY++PGL
Sbjct: 621  SRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGL 680

Query: 1075 HFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLL 1254
            HFGD+HV+ A YV+EL + VG+AKYGIFF   GPRS A EIAN D DGDMYWV  N +L+
Sbjct: 681  HFGDVHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGDFDGDMYWVSINRKLV 740

Query: 1255 NWFRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFSSNNVGVAAICWLSL 1434
            + +R S PWT+ H        KP +FS  D LE+ LF +FL A+    ++ VAA  WL+ 
Sbjct: 741  DSYRASKPWTRMHSTPKAVSKKPTEFS-ADELEYELFRQFLGAKSKGASMSVAADSWLAF 799

Query: 1435 MDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNK 1614
            MD  L L + + + +  ++ K+LHL DIYYDALD  KSGKK+ IP  L+  + PH+M+  
Sbjct: 800  MDLLLMLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERG 859

Query: 1615 SPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPED 1794
            +P                SY STSILGQI+D V+++ +  +  + E+ KLP F+  +P++
Sbjct: 860  NP---------------FSYHSTSILGQIYDYVDSYPD-EDLCITEISKLPCFDVEIPDE 903

Query: 1795 RIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQS 1974
             +A W E++  Y+ +M  A+N+              N A   V +KYK++LY APE +QS
Sbjct: 904  CMALWGERYEEYKKDMTMAMNSGC---------EVKNSACNEVIKKYKKLLYGAPEFEQS 954

Query: 1975 PRKEEDIYT*TLLPY 2019
             RK +DI+   L  Y
Sbjct: 955  VRKTKDIFNEALALY 969



 Score = 54.7 bits (130), Expect(2) = e-178
 Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = +3

Query: 1995 IYMNALAIYHVSYDEAK-RHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVL 2159
            I+  ALA+YHV+YD A+  + + KC FAWKVAG ALC+ +     + AF    S+L
Sbjct: 961  IFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYHKENAFPILPSIL 1016


>ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana sylvestris]
          Length = 1023

 Score =  595 bits (1534), Expect(2) = e-177
 Identities = 319/675 (47%), Positives = 444/675 (65%), Gaps = 2/675 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFC-KSVSEARSLFMHVHNLSSTTKYMARFSLILS 177
            +S+KCYFV  + +++ +      S +F  +  SEAR  FMHVH +S+  KY AR SLILS
Sbjct: 329  ASLKCYFVRFESIETYNH---GGSYVFAGRRTSEARCHFMHVHMVSNMAKYAARLSLILS 385

Query: 178  KTIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIF 357
            KTIKL ++ ASV +E +EDI CRD+ GCI+ +EDGEP IHTDGTGFIS+DLA++CP++  
Sbjct: 386  KTIKLQVNLASVTIERVEDILCRDESGCIICDEDGEPCIHTDGTGFISEDLAMRCPKDFS 445

Query: 358  KGKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNK 537
            K ++    ++E  +   +  E  +   +   S   +PPLL+Q R++ NG AVKGT L+N+
Sbjct: 446  KAEYIKDENYENFV-DIVDLEDMIAERRGNGSLNKEPPLLMQCRLYKNGCAVKGTFLINR 504

Query: 538  KLPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVP 717
            K+  + IQ+RPSM+KV +D   ++  P  NS EVVA S +P++T LSK+LI LLSYGGV 
Sbjct: 505  KIGSRKIQIRPSMVKVETD-PTISSLPTFNSLEVVAISNRPRKTYLSKHLISLLSYGGVG 563

Query: 718  DGYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDD-FLVAKMILCGIPLGESFLKARL 894
              +F+E+L  ALE+TK+ +  KRAAL+ A++Y EMDD  L A+MI  G+PL E  L ARL
Sbjct: 564  REFFMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARMISSGVPLNEPHLHARL 623

Query: 895  SVLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKHPGL 1074
            S L + E   L+ GKLP++DS+YLMGTADPTG+L+ ++VCVIL+SGQVSG +LVY++PGL
Sbjct: 624  SRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGL 683

Query: 1075 HFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLL 1254
            HFGD+HV+ A YV+EL + VG+AKYGI F   GPRS A EIAN D DGDMYWV  N +L+
Sbjct: 684  HFGDVHVMKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGDFDGDMYWVSINRKLV 743

Query: 1255 NWFRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFSSNNVGVAAICWLSL 1434
            + +R S PWT+ H        KP +FS  D LE+ LF +FL A+    ++ VAA  WL+ 
Sbjct: 744  DSYRASKPWTRTHSTPKAVSKKPTEFS-ADELEYELFRQFLRAKSKGASMSVAADSWLAF 802

Query: 1435 MDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNK 1614
            MD  L L + +A+ +  ++ K+LHL DIYYDALD  KSGKK+ IP  L+  + PH+M+  
Sbjct: 803  MDRLLMLRDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERG 862

Query: 1615 SPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPED 1794
            +P                SY STSILGQI+D V+++ +  +  + E+ KLP F+  +P++
Sbjct: 863  NP---------------FSYHSTSILGQIYDYVDSYPD-EDLCITEISKLPCFDVEIPDE 906

Query: 1795 RIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQS 1974
                W E++  Y+ +M  A+N+              N A   V +KYK++LY APE +QS
Sbjct: 907  CTTLWRERYEEYKKDMTMAMNSGC---------EVKNSACNEVIKKYKKLLYGAPEFEQS 957

Query: 1975 PRKEEDIYT*TLLPY 2019
             RK EDI+   L  Y
Sbjct: 958  VRKTEDIFNEALALY 972



 Score = 56.6 bits (135), Expect(2) = e-177
 Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
 Frame = +3

Query: 1995 IYMNALAIYHVSYDEAK-RHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVL 2159
            I+  ALA+YHV+YD A+  + + KC FAWKVAG ALC+ +   Q + AF    S+L
Sbjct: 964  IFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYQKENAFPILPSIL 1019


>ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1018

 Score =  597 bits (1539), Expect(2) = e-177
 Identities = 321/675 (47%), Positives = 448/675 (66%), Gaps = 2/675 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFC-KSVSEARSLFMHVHNLSSTTKYMARFSLILS 177
            +S+KCYFV  + +++ +      S +F  K  SEAR  FMHVH +S+  KY AR SLILS
Sbjct: 326  ASLKCYFVRFESIETYNH---GGSYVFAAKRTSEARCHFMHVHMVSNMAKYAARLSLILS 382

Query: 178  KTIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIF 357
            KTIKL ++ ASV +E +EDI CRD+ GCI+ +EDGEPRIHTDGTGFIS+DLA++CP++  
Sbjct: 383  KTIKLQVNLASVTIERVEDILCRDESGCIICDEDGEPRIHTDGTGFISEDLAMRCPKDFS 442

Query: 358  KGKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNK 537
            K ++    ++E  +   +  E  +   +   S   +PPLL+Q R+F NG AVKGT LVN+
Sbjct: 443  KAEYIKDENYENFV-DIVDLEDMIAERRGNGSLNKEPPLLMQCRLFKNGCAVKGTFLVNR 501

Query: 538  KLPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVP 717
            K+  + IQ+RPSM+KV +D   ++  P  NS EVVA  ++P++T LSK+LI LLSYGGV 
Sbjct: 502  KIGSRKIQIRPSMVKVETD-PTISALPTFNSLEVVA--IRPRKTYLSKHLISLLSYGGVG 558

Query: 718  DGYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDD-FLVAKMILCGIPLGESFLKARL 894
            + +F+E+L  ALE+TK+ +  KRAAL+ A++Y EMDD  L A++I  G+PL E  L ARL
Sbjct: 559  NEFFMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLISSGVPLNEPHLHARL 618

Query: 895  SVLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKHPGL 1074
            S L + E   L+ GKLP++DS+YLMGTADPTG+L+ ++VCVIL+SGQVSG +LVY++PGL
Sbjct: 619  SRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGL 678

Query: 1075 HFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLL 1254
            HFGD+HV+ A YV+EL + VG+AKYGIFF   GPRS A EIAN D DGDMYWV  N +L+
Sbjct: 679  HFGDVHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGDFDGDMYWVSINRKLV 738

Query: 1255 NWFRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFSSNNVGVAAICWLSL 1434
            + +R S PWT+ H        KP +FS  D LE+ LF +FL A+    ++ VAA  WL+ 
Sbjct: 739  DSYRASKPWTRMHSTPKAVSKKPTEFS-ADELEYELFRQFLGAKSKGASMSVAADSWLAF 797

Query: 1435 MDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNK 1614
            MD  L L + + + +  ++ K+LHL DIYYDALD  KSGKK+ IP  L+  + PH+M+  
Sbjct: 798  MDLLLMLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERG 857

Query: 1615 SPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPED 1794
            +P                SY STSILGQI+D V+++ +  +  + E+ KLP F+  +P++
Sbjct: 858  NP---------------FSYHSTSILGQIYDYVDSYPD-EDLCITEISKLPCFDVEIPDE 901

Query: 1795 RIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQS 1974
             +A W E++  Y+ +M  A+N+              N A   V +KYK++LY APE +QS
Sbjct: 902  CMALWGERYEEYKKDMTMAMNSGC---------EVKNSACNEVIKKYKKLLYGAPEFEQS 952

Query: 1975 PRKEEDIYT*TLLPY 2019
             RK +DI+   L  Y
Sbjct: 953  VRKTKDIFNEALALY 967



 Score = 54.7 bits (130), Expect(2) = e-177
 Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = +3

Query: 1995 IYMNALAIYHVSYDEAK-RHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVL 2159
            I+  ALA+YHV+YD A+  + + KC FAWKVAG ALC+ +     + AF    S+L
Sbjct: 959  IFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYHKENAFPILPSIL 1014


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334280|gb|ERP58267.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score =  624 bits (1610), Expect = e-176
 Identities = 342/678 (50%), Positives = 461/678 (67%), Gaps = 2/678 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLILSK 180
            S VKC+FV M+ V S D      +IL  K++ +ARS+FMHV NLSS + YMARFSLILSK
Sbjct: 188  SPVKCFFVRMESVASIDN---QDNILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSK 244

Query: 181  TIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIFK 360
            T+ L++D + V ++ I D  CRD+DG +VY  DG+P IHTDGTGFIS DLALKCP+N FK
Sbjct: 245  TMNLEVDLSCVDIKTIADEPCRDKDGNVVYGTDGKPLIHTDGTGFISHDLALKCPKNQFK 304

Query: 361  GKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNKK 540
            G     S+ E++ +H         +E+      GDPPLLIQFR+F+NG AVKGT LVNKK
Sbjct: 305  GTCLRASNIERLNVHNEV------MEQYPECRNGDPPLLIQFRLFNNGRAVKGTFLVNKK 358

Query: 541  LPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVPD 720
            L  +T+ +RPSMIKV +D   ++     NS E+V TS +PK+T LSK LI LLSYGGVP+
Sbjct: 359  LTHQTLHIRPSMIKVETD-PKLSSTFSKNSLEIVGTSSRPKKTFLSKNLIALLSYGGVPE 417

Query: 721  GYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFLVAKMILCGIPLGESFLKARLSV 900
             +F+ ++ +ALED     ++K AALR AL+YG+MDD +VA MI CGIPL E +L+ RLS+
Sbjct: 418  EFFMGIVNNALEDAHGILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQCRLSI 477

Query: 901  LMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKHPGLHF 1080
            LM+ E KSLK GK+P+ +SYYLMGTADPTG+L+  +VC+IL+ GQ+SG++L+Y++PGLHF
Sbjct: 478  LMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLIYRNPGLHF 537

Query: 1081 GDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLLNW 1260
            GDIH+L ATYV+ELE++VGNAKY IFFP  GPRS+ADE++  D DGDM++V RNPQLL  
Sbjct: 538  GDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPQLLET 597

Query: 1261 FRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFS-SNNVGVAAICWLSLM 1437
            F+ + PWT      NVP  KP++FSDE+ LE  LF+ FL  RF  S+ VGVAA  WL++M
Sbjct: 598  FKQTEPWTPSTSTPNVPNRKPSEFSDEE-LEVELFKLFLRNRFQPSSTVGVAADSWLAMM 656

Query: 1438 DTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDV-AKSGKKIVIPPKLRQQKTPHFMQNK 1614
            D  LTL    AE+I  +++ +  L DIYYDALD   K G++I +P  L+ +  PHFM   
Sbjct: 657  DRLLTLGNDCAEEIVCMKENINLLIDIYYDALDAPKKGGRRIEVPEGLKAELFPHFM--- 713

Query: 1615 SPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPED 1794
                 G N       +  +Y+STSILG+I+D+V+A+E+  +    +V KLP F+  V E 
Sbjct: 714  -----GKN-------EKKTYRSTSILGKIYDKVKAYEDM-DLSSNDVWKLPCFDDEVHEL 760

Query: 1795 RIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQS 1974
             +  W E +  YR EMR+AL            G ++N  +  V +KYK+ LY A E + S
Sbjct: 761  YLVKWKELYGQYRKEMRNALK----------AGEESNDKANEVIRKYKEFLYEAAEFNLS 810

Query: 1975 PRKEEDIYT*TLLPYIMS 2028
             R++E+I+   +  Y +S
Sbjct: 811  KRRDEEIFEEAMALYQVS 828


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334279|gb|ERP58266.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score =  624 bits (1610), Expect = e-176
 Identities = 342/678 (50%), Positives = 461/678 (67%), Gaps = 2/678 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLILSK 180
            S VKC+FV M+ V S D      +IL  K++ +ARS+FMHV NLSS + YMARFSLILSK
Sbjct: 210  SPVKCFFVRMESVASIDN---QDNILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSK 266

Query: 181  TIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIFK 360
            T+ L++D + V ++ I D  CRD+DG +VY  DG+P IHTDGTGFIS DLALKCP+N FK
Sbjct: 267  TMNLEVDLSCVDIKTIADEPCRDKDGNVVYGTDGKPLIHTDGTGFISHDLALKCPKNQFK 326

Query: 361  GKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNKK 540
            G     S+ E++ +H         +E+      GDPPLLIQFR+F+NG AVKGT LVNKK
Sbjct: 327  GTCLRASNIERLNVHNEV------MEQYPECRNGDPPLLIQFRLFNNGRAVKGTFLVNKK 380

Query: 541  LPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVPD 720
            L  +T+ +RPSMIKV +D   ++     NS E+V TS +PK+T LSK LI LLSYGGVP+
Sbjct: 381  LTHQTLHIRPSMIKVETD-PKLSSTFSKNSLEIVGTSSRPKKTFLSKNLIALLSYGGVPE 439

Query: 721  GYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFLVAKMILCGIPLGESFLKARLSV 900
             +F+ ++ +ALED     ++K AALR AL+YG+MDD +VA MI CGIPL E +L+ RLS+
Sbjct: 440  EFFMGIVNNALEDAHGILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQCRLSI 499

Query: 901  LMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKHPGLHF 1080
            LM+ E KSLK GK+P+ +SYYLMGTADPTG+L+  +VC+IL+ GQ+SG++L+Y++PGLHF
Sbjct: 500  LMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLIYRNPGLHF 559

Query: 1081 GDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLLNW 1260
            GDIH+L ATYV+ELE++VGNAKY IFFP  GPRS+ADE++  D DGDM++V RNPQLL  
Sbjct: 560  GDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPQLLET 619

Query: 1261 FRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFS-SNNVGVAAICWLSLM 1437
            F+ + PWT      NVP  KP++FSDE+ LE  LF+ FL  RF  S+ VGVAA  WL++M
Sbjct: 620  FKQTEPWTPSTSTPNVPNRKPSEFSDEE-LEVELFKLFLRNRFQPSSTVGVAADSWLAMM 678

Query: 1438 DTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDV-AKSGKKIVIPPKLRQQKTPHFMQNK 1614
            D  LTL    AE+I  +++ +  L DIYYDALD   K G++I +P  L+ +  PHFM   
Sbjct: 679  DRLLTLGNDCAEEIVCMKENINLLIDIYYDALDAPKKGGRRIEVPEGLKAELFPHFM--- 735

Query: 1615 SPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPED 1794
                 G N       +  +Y+STSILG+I+D+V+A+E+  +    +V KLP F+  V E 
Sbjct: 736  -----GKN-------EKKTYRSTSILGKIYDKVKAYEDM-DLSSNDVWKLPCFDDEVHEL 782

Query: 1795 RIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQS 1974
             +  W E +  YR EMR+AL            G ++N  +  V +KYK+ LY A E + S
Sbjct: 783  YLVKWKELYGQYRKEMRNALK----------AGEESNDKANEVIRKYKEFLYEAAEFNLS 832

Query: 1975 PRKEEDIYT*TLLPYIMS 2028
             R++E+I+   +  Y +S
Sbjct: 833  KRRDEEIFEEAMALYQVS 850


>ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana sylvestris]
          Length = 1021

 Score =  590 bits (1521), Expect(2) = e-175
 Identities = 318/675 (47%), Positives = 444/675 (65%), Gaps = 2/675 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFC-KSVSEARSLFMHVHNLSSTTKYMARFSLILS 177
            +S+KCYFV  + +++ +      S +F  +  SEAR  FMHVH +S+  KY AR SLILS
Sbjct: 329  ASLKCYFVRFESIETYNH---GGSYVFAGRRTSEARCHFMHVHMVSNMAKYAARLSLILS 385

Query: 178  KTIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIF 357
            KTIKL ++ ASV +E +EDI CRD+ GCI+ +EDGEP IHTDGTGFIS+DLA++CP++  
Sbjct: 386  KTIKLQVNLASVTIERVEDILCRDESGCIICDEDGEPCIHTDGTGFISEDLAMRCPKDFS 445

Query: 358  KGKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNK 537
            K ++    ++E  +   +  E  +   +   S   +PPLL+Q R++ NG AVKGT L+N+
Sbjct: 446  KAEYIKDENYENFV-DIVDLEDMIAERRGNGSLNKEPPLLMQCRLYKNGCAVKGTFLINR 504

Query: 538  KLPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVP 717
            K+  + IQ+RPSM+KV +D   ++  P  NS EVVA  ++P++T LSK+LI LLSYGGV 
Sbjct: 505  KIGSRKIQIRPSMVKVETD-PTISSLPTFNSLEVVA--IRPRKTYLSKHLISLLSYGGVG 561

Query: 718  DGYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDD-FLVAKMILCGIPLGESFLKARL 894
              +F+E+L  ALE+TK+ +  KRAAL+ A++Y EMDD  L A+MI  G+PL E  L ARL
Sbjct: 562  REFFMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARMISSGVPLNEPHLHARL 621

Query: 895  SVLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKHPGL 1074
            S L + E   L+ GKLP++DS+YLMGTADPTG+L+ ++VCVIL+SGQVSG +LVY++PGL
Sbjct: 622  SRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGL 681

Query: 1075 HFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLL 1254
            HFGD+HV+ A YV+EL + VG+AKYGI F   GPRS A EIAN D DGDMYWV  N +L+
Sbjct: 682  HFGDVHVMKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGDFDGDMYWVSINRKLV 741

Query: 1255 NWFRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFSSNNVGVAAICWLSL 1434
            + +R S PWT+ H        KP +FS  D LE+ LF +FL A+    ++ VAA  WL+ 
Sbjct: 742  DSYRASKPWTRTHSTPKAVSKKPTEFS-ADELEYELFRQFLRAKSKGASMSVAADSWLAF 800

Query: 1435 MDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNK 1614
            MD  L L + +A+ +  ++ K+LHL DIYYDALD  KSGKK+ IP  L+  + PH+M+  
Sbjct: 801  MDRLLMLRDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERG 860

Query: 1615 SPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPED 1794
            +P                SY STSILGQI+D V+++ +  +  + E+ KLP F+  +P++
Sbjct: 861  NP---------------FSYHSTSILGQIYDYVDSYPD-EDLCITEISKLPCFDVEIPDE 904

Query: 1795 RIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQS 1974
                W E++  Y+ +M  A+N+              N A   V +KYK++LY APE +QS
Sbjct: 905  CTTLWRERYEEYKKDMTMAMNSGC---------EVKNSACNEVIKKYKKLLYGAPEFEQS 955

Query: 1975 PRKEEDIYT*TLLPY 2019
             RK EDI+   L  Y
Sbjct: 956  VRKTEDIFNEALALY 970



 Score = 56.6 bits (135), Expect(2) = e-175
 Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
 Frame = +3

Query: 1995 IYMNALAIYHVSYDEAK-RHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVL 2159
            I+  ALA+YHV+YD A+  + + KC FAWKVAG ALC+ +   Q + AF    S+L
Sbjct: 962  IFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYQKENAFPILPSIL 1017


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843309|ref|XP_006475556.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
            sinensis] gi|557554497|gb|ESR64511.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score =  584 bits (1506), Expect(2) = e-175
 Identities = 331/679 (48%), Positives = 456/679 (67%), Gaps = 6/679 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLILSK 180
            S VKCYFV M+     D       IL  K+V EAR +FMHV  +SS   YM+R SLILSK
Sbjct: 319  SPVKCYFVRMESSAFID--MGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSK 376

Query: 181  TIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIFK 360
            T+KL++DF+ + +E IED  CRD+DG +VY +DGE  IHTDGTGFIS+DLALKCP  ++K
Sbjct: 377  TMKLEVDFSRINIERIEDEPCRDKDGNVVY-KDGEALIHTDGTGFISEDLALKCPTYVYK 435

Query: 361  GKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNKK 540
             K ++    E+ +  +  E     + ++  S+ G+PPLL+Q R+F+NG+AVKGT L+NKK
Sbjct: 436  EKCTNDDSTERSIDRKELEANFSDVART-ESHYGEPPLLMQVRLFYNGTAVKGTLLLNKK 494

Query: 541  LPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVPD 720
            LPP+TIQ+RPSMIKV++D   ++D    NS EVV TS +P++T LS+ LI LLSYGGVP+
Sbjct: 495  LPPQTIQIRPSMIKVKADRD-LSDGQTFNSLEVVKTSNQPRKTYLSRNLIALLSYGGVPE 553

Query: 721  GYFLELLTDALEDTKKFHNDKRAALRAALHYGEMD-DFLVAKMILCGIPLGESFLKARLS 897
             +FL++L +AL+D +   ++KR AL+ + +YG MD DF  A+MIL GI L E +L+ RLS
Sbjct: 554  IFFLDILRNALDDARGVFSNKRNALKVSFNYGGMDYDFTSARMILSGISLDEPYLQHRLS 613

Query: 898  VLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGD-ILVYKHPGL 1074
            +LM+ E KSL+ GKLP+ +SYYLMGT DPTGILK ++VC+IL+ GQVS + +LVY++PGL
Sbjct: 614  ILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSNEVCIILKDGQVSWEKVLVYRNPGL 673

Query: 1075 HFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLL 1254
            HFGDIHVL ATYV+ELE++VG +KY IFFP  GPRS+ADEIA  D DGDMY+V RNP+LL
Sbjct: 674  HFGDIHVLKATYVKELEDFVGTSKYAIFFPCNGPRSLADEIAGGDFDGDMYFVSRNPELL 733

Query: 1255 NWFRPSTPW--TQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARF-SSNNVGVAAICW 1425
              F+ S  W  T K+ + N    +P DFS E+ LE  LF+ FL  RF  SN   +AA CW
Sbjct: 734  KHFKESERWMSTSKNLSAN---KRPIDFSLEE-LESELFKLFLNTRFCPSNAKSLAADCW 789

Query: 1426 LSLMDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDV-AKSGKKIVIPPKLRQQKTPHF 1602
             ++MD  LTL + +AE+   +++ +L L +IYYDALD   KSG K+ +P  L+ +K P +
Sbjct: 790  QAVMDRFLTLGDESAEEKAAMKENMLRLINIYYDALDAPKKSGIKVEVPEDLKVEKFPCY 849

Query: 1603 MQNKSPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQV 1782
            M+                 +  S++STS+LG I++ V+++E   ++ V E+ KLP F+  
Sbjct: 850  MRRD---------------ESVSFESTSVLGTIYNTVKSYEAV-DRSVTEIWKLPCFDDG 893

Query: 1783 VPEDRIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPE 1962
            VPE  +  W   ++ YR EM+ A++   V         +  +A+  V +KYKQILY A E
Sbjct: 894  VPEACMTKWKGYYDQYRWEMKEAIDKCTV---------EREEAAELVIEKYKQILYGAAE 944

Query: 1963 LDQSPRKEEDIYT*TLLPY 2019
             +QS R  E+IY   L  Y
Sbjct: 945  FEQSTRTLEEIYNEALAIY 963



 Score = 62.4 bits (150), Expect(2) = e-175
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +3

Query: 1995 IYMNALAIYHVSYD-EAKRHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVL 2159
            IY  ALAIY+++YD  A R  V  C FAW+VAG AL K+Y  RQ D + +CS SVL
Sbjct: 955  IYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSASVL 1010


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843311|ref|XP_006475557.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
            sinensis] gi|557554498|gb|ESR64512.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  584 bits (1506), Expect(2) = e-175
 Identities = 331/679 (48%), Positives = 456/679 (67%), Gaps = 6/679 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLILSK 180
            S VKCYFV M+     D       IL  K+V EAR +FMHV  +SS   YM+R SLILSK
Sbjct: 317  SPVKCYFVRMESSAFID--MGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSK 374

Query: 181  TIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIFK 360
            T+KL++DF+ + +E IED  CRD+DG +VY +DGE  IHTDGTGFIS+DLALKCP  ++K
Sbjct: 375  TMKLEVDFSRINIERIEDEPCRDKDGNVVY-KDGEALIHTDGTGFISEDLALKCPTYVYK 433

Query: 361  GKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNKK 540
             K ++    E+ +  +  E     + ++  S+ G+PPLL+Q R+F+NG+AVKGT L+NKK
Sbjct: 434  EKCTNDDSTERSIDRKELEANFSDVART-ESHYGEPPLLMQVRLFYNGTAVKGTLLLNKK 492

Query: 541  LPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVPD 720
            LPP+TIQ+RPSMIKV++D   ++D    NS EVV TS +P++T LS+ LI LLSYGGVP+
Sbjct: 493  LPPQTIQIRPSMIKVKADRD-LSDGQTFNSLEVVKTSNQPRKTYLSRNLIALLSYGGVPE 551

Query: 721  GYFLELLTDALEDTKKFHNDKRAALRAALHYGEMD-DFLVAKMILCGIPLGESFLKARLS 897
             +FL++L +AL+D +   ++KR AL+ + +YG MD DF  A+MIL GI L E +L+ RLS
Sbjct: 552  IFFLDILRNALDDARGVFSNKRNALKVSFNYGGMDYDFTSARMILSGISLDEPYLQHRLS 611

Query: 898  VLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGD-ILVYKHPGL 1074
            +LM+ E KSL+ GKLP+ +SYYLMGT DPTGILK ++VC+IL+ GQVS + +LVY++PGL
Sbjct: 612  ILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSNEVCIILKDGQVSWEKVLVYRNPGL 671

Query: 1075 HFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLL 1254
            HFGDIHVL ATYV+ELE++VG +KY IFFP  GPRS+ADEIA  D DGDMY+V RNP+LL
Sbjct: 672  HFGDIHVLKATYVKELEDFVGTSKYAIFFPCNGPRSLADEIAGGDFDGDMYFVSRNPELL 731

Query: 1255 NWFRPSTPW--TQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARF-SSNNVGVAAICW 1425
              F+ S  W  T K+ + N    +P DFS E+ LE  LF+ FL  RF  SN   +AA CW
Sbjct: 732  KHFKESERWMSTSKNLSAN---KRPIDFSLEE-LESELFKLFLNTRFCPSNAKSLAADCW 787

Query: 1426 LSLMDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDV-AKSGKKIVIPPKLRQQKTPHF 1602
             ++MD  LTL + +AE+   +++ +L L +IYYDALD   KSG K+ +P  L+ +K P +
Sbjct: 788  QAVMDRFLTLGDESAEEKAAMKENMLRLINIYYDALDAPKKSGIKVEVPEDLKVEKFPCY 847

Query: 1603 MQNKSPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQV 1782
            M+                 +  S++STS+LG I++ V+++E   ++ V E+ KLP F+  
Sbjct: 848  MRRD---------------ESVSFESTSVLGTIYNTVKSYEAV-DRSVTEIWKLPCFDDG 891

Query: 1783 VPEDRIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPE 1962
            VPE  +  W   ++ YR EM+ A++   V         +  +A+  V +KYKQILY A E
Sbjct: 892  VPEACMTKWKGYYDQYRWEMKEAIDKCTV---------EREEAAELVIEKYKQILYGAAE 942

Query: 1963 LDQSPRKEEDIYT*TLLPY 2019
             +QS R  E+IY   L  Y
Sbjct: 943  FEQSTRTLEEIYNEALAIY 961



 Score = 62.4 bits (150), Expect(2) = e-175
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +3

Query: 1995 IYMNALAIYHVSYD-EAKRHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVL 2159
            IY  ALAIY+++YD  A R  V  C FAW+VAG AL K+Y  RQ D + +CS SVL
Sbjct: 953  IYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSASVL 1008


>ref|XP_009352548.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Pyrus x
            bretschneideri]
          Length = 1088

 Score =  586 bits (1511), Expect(2) = e-175
 Identities = 332/669 (49%), Positives = 431/669 (64%), Gaps = 3/669 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLILSK 180
            S VKCYFV MD   S D       +L  +++ EARSLFMH H +SS   YMARFSLILSK
Sbjct: 396  SPVKCYFVRMDSDASID--RDVWHMLANRTIYEARSLFMHAHTVSSVATYMARFSLILSK 453

Query: 181  TIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIFK 360
            TI+  +D + V VE I++  CRD+ G ++Y +D +P IHTDGTGFIS+DLAL CP NI K
Sbjct: 454  TIRFPVDLSVVNVEFIDEEYCRDESGNLIYRDD-KPLIHTDGTGFISEDLALLCPNNISK 512

Query: 361  GKWSSQSDFEKILLHQIAEETSLGLEKSIR-SYIGDPPLLIQFRMFHNGSAVKGTALVNK 537
            GK  S    E++  H   E    G+EK    S IG+PPLLIQFR+F+ G AVKGT LVNK
Sbjct: 513  GKRISNQKIERLPNHN--ELDGKGMEKKQPGSRIGEPPLLIQFRLFYKGYAVKGTFLVNK 570

Query: 538  KLPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVP 717
             LPPKT+Q+RPSM+KV+ D   ++D+   N+ E+V TS+ P+++ LS+ LI LL +GGVP
Sbjct: 571  MLPPKTVQIRPSMVKVQID-PELSDNETVNALEIVGTSIPPRKSYLSRNLIALLFHGGVP 629

Query: 718  DGYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFL-VAKMILCGIPLGESFLKARL 894
              YF+E+L  ALED      +   AL+ A++ GE+DD    A+MILCGIPL ES+L+ RL
Sbjct: 630  KEYFMEILERALEDADSVFCNAHTALKVAVNNGEIDDNSNTARMILCGIPLDESYLQYRL 689

Query: 895  SVLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKHPGL 1074
            S+L++ E+K L+ GKL + D YYLMGTADPTGIL+  +VC+IL+SGQVSG +LVY++PGL
Sbjct: 690  SILIKEEMKGLRRGKLYVPDCYYLMGTADPTGILEKDEVCIILDSGQVSGKVLVYRNPGL 749

Query: 1075 HFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLL 1254
            HFGDIHVL ATYV+ELE  VGNAKY IFF   GPRS+ADEI+  D DGD+YWV +NPQLL
Sbjct: 750  HFGDIHVLKATYVKELEYVVGNAKYAIFFSRKGPRSVADEISGGDFDGDLYWVSKNPQLL 809

Query: 1255 NWFRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFS-SNNVGVAAICWLS 1431
             +F+PS PW     A      KPA  S ED LE  L   FL  RF  S  +  AA  WL+
Sbjct: 810  GYFKPSEPWVPASSAPKAASVKPAKLSKED-LEEQLINLFLTTRFKPSYAMSEAADSWLA 868

Query: 1432 LMDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQN 1611
            +MD  LT  +S+ ++   V+  +L L DIYYDALD  K G K+ +P  L+  K PH+M+ 
Sbjct: 869  MMDRYLTRGDSSIDE-NLVKANILRLVDIYYDALDAPKKGGKVEVPKDLKVSKFPHYMEK 927

Query: 1612 KSPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPE 1791
            K                 NSY STSILG I+D V  ++   +    EV KLP F+  VPE
Sbjct: 928  K-----------------NSYPSTSILGSIYDTVNEYQP-DDLSTREVKKLPIFDVEVPE 969

Query: 1792 DRIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQ 1971
            + +  W EQ+  YR +M  AL +    DQ        NQA+  +  KY++ILY   + D+
Sbjct: 970  ECLIKWREQYKQYRCDMTSALRD---GDQ-----EGKNQAAGELITKYREILYGGDDFDK 1021

Query: 1972 SPRKEEDIY 1998
            S R   +I+
Sbjct: 1022 STRPMGEIF 1030



 Score = 59.3 bits (142), Expect(2) = e-175
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +3

Query: 1995 IYMNALAIYHVSYDEAKRHGVGKCYFAWKVAGQALCKYYLTRQNDAA-FMCSKSVL 2159
            I+  A+AIY+V YD A+  GV KC FAWKVAG AL K +  +Q DA  F+ S SVL
Sbjct: 1029 IFDEAIAIYNVCYDYARSAGVSKCGFAWKVAGSALFKLHFIKQGDACPFLVSPSVL 1084


>gb|KDO66531.1| hypothetical protein CISIN_1g001771mg [Citrus sinensis]
          Length = 1015

 Score =  580 bits (1496), Expect(2) = e-174
 Identities = 330/679 (48%), Positives = 455/679 (67%), Gaps = 6/679 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLILSK 180
            S VKCYFV M+     D       IL  K+V EAR +FMHV  +SS   YM+R SLILSK
Sbjct: 319  SPVKCYFVRMESSAFID--MGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSK 376

Query: 181  TIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIFK 360
            T+KL++DF+ + +E IED  CRD+DG +VY +DGE  IHTDGTGFIS+DLALKCP  ++K
Sbjct: 377  TMKLEVDFSRINIERIEDEPCRDKDGNVVY-KDGEALIHTDGTGFISEDLALKCPTYVYK 435

Query: 361  GKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNKK 540
             K ++    E+ +  +  E     + ++  S+ G+PPLL+Q R+F+NG+AVKGT L+NKK
Sbjct: 436  EKCTNDDSTERSIDRKELEANFSDVART-ESHYGEPPLLMQVRLFYNGTAVKGTLLLNKK 494

Query: 541  LPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVPD 720
            LPP+TIQ+RPSMIKV++D   ++D    NS EVV TS +P++T LS+ LI LLSYGGVP+
Sbjct: 495  LPPQTIQIRPSMIKVKADRD-LSDGQTFNSLEVVKTSNQPRKTYLSRNLIALLSYGGVPE 553

Query: 721  GYFLELLTDALEDTKKFHNDKRAALRAALHYGEMD-DFLVAKMILCGIPLGESFLKARLS 897
             +FL++L +AL+D +   ++KR AL+ + +YG MD DF  A+MIL GI L E +L+ RLS
Sbjct: 554  IFFLDILRNALDDARGVFSNKRNALKVSFNYGGMDYDFTSARMILSGISLDEPYLQHRLS 613

Query: 898  VLMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGD-ILVYKHPGL 1074
            +LM+ E KSL+ GKLP+ +SYYLMGT DPTGILK ++VC+IL+ GQVS + +LVY++PGL
Sbjct: 614  ILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSNEVCIILKDGQVSWEKVLVYRNPGL 673

Query: 1075 HFGDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLL 1254
            HFGDIHVL ATYV+ELE++VG +KY IFFP  GPRS+ADEIA  D DGDMY+V RNP+LL
Sbjct: 674  HFGDIHVLKATYVKELEDFVGTSKYAIFFPCNGPRSLADEIAGGDFDGDMYFVSRNPELL 733

Query: 1255 NWFRPSTPW--TQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARF-SSNNVGVAAICW 1425
              F+ S  W  T K+ + N    +  DFS E+ LE  LF+ FL  RF  SN   +AA CW
Sbjct: 734  KHFKESERWMSTSKNLSAN---KRLIDFSLEE-LESELFKLFLNTRFCPSNAKSLAADCW 789

Query: 1426 LSLMDTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDV-AKSGKKIVIPPKLRQQKTPHF 1602
             ++MD  LTL + +AE+   +++ +L L +IYYDALD   KSG K+ +P  L+ +K P +
Sbjct: 790  QAVMDRFLTLGDESAEEKAAMKENMLRLINIYYDALDAPKKSGIKVEVPEDLKVEKFPCY 849

Query: 1603 MQNKSPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQV 1782
            M+                 +  S++STS+LG I++ V+++E   ++ V E+ KLP F+  
Sbjct: 850  MRRD---------------ESVSFESTSVLGTIYNTVKSYEAV-DRSVTEIWKLPCFDDG 893

Query: 1783 VPEDRIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPE 1962
            VPE  +  W   ++ YR EM+ A++   V         +  +A+  V +KYKQILY A E
Sbjct: 894  VPEACMTKWKGYYDQYRWEMKEAIDKCTV---------EREEAAELVIEKYKQILYGAAE 944

Query: 1963 LDQSPRKEEDIYT*TLLPY 2019
             +QS R  E+IY   L  Y
Sbjct: 945  FEQSTRTLEEIYNEALAIY 963



 Score = 62.4 bits (150), Expect(2) = e-174
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +3

Query: 1995 IYMNALAIYHVSYD-EAKRHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVL 2159
            IY  ALAIY+++YD  A R  V  C FAW+VAG AL K+Y  RQ D + +CS SVL
Sbjct: 955  IYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSASVL 1010


>ref|XP_011025605.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Populus
            euphratica] gi|743837972|ref|XP_011025606.1| PREDICTED:
            probable RNA-dependent RNA polymerase 5 [Populus
            euphratica]
          Length = 1010

 Score =  614 bits (1584), Expect = e-173
 Identities = 340/678 (50%), Positives = 457/678 (67%), Gaps = 2/678 (0%)
 Frame = +1

Query: 1    SSVKCYFVCMDCVDSDDPLTIAPSILFCKSVSEARSLFMHVHNLSSTTKYMARFSLILSK 180
            S VKC+FV M+ V S D       IL  K++ +ARS+FMHV NLSS + YMARFSLILSK
Sbjct: 321  SPVKCFFVRMESVASIDNQDY---ILSGKTIRQARSIFMHVDNLSSLSNYMARFSLILSK 377

Query: 181  TIKLDIDFASVRVEEIEDIACRDQDGCIVYNEDGEPRIHTDGTGFISQDLALKCPRNIFK 360
            T+ L++D + V ++ I D  CRD+DG +VY  DG+P I+TDGTGFIS DLALKCP+N FK
Sbjct: 378  TMNLEVDLSFVDIKTIADEPCRDKDGNVVYGTDGKPLIYTDGTGFISHDLALKCPKNQFK 437

Query: 361  GKWSSQSDFEKILLHQIAEETSLGLEKSIRSYIGDPPLLIQFRMFHNGSAVKGTALVNKK 540
            G     S+ E++ +H         +E+      GDPPLLIQFR+F+NG AVKGT LVNKK
Sbjct: 438  GTCLRASNIERVNVHNEV------MEQYPECCNGDPPLLIQFRLFNNGRAVKGTFLVNKK 491

Query: 541  LPPKTIQVRPSMIKVRSDLGYVNDDPITNSFEVVATSMKPKRTNLSKYLIVLLSYGGVPD 720
            L  +T+ +RPSMIKV +D   ++     NS E+V TS +PK+T LSK LI LLSYGGVP+
Sbjct: 492  LTHQTLHIRPSMIKVETD-PKLSSTFSKNSLEIVGTSSRPKKTVLSKNLIALLSYGGVPE 550

Query: 721  GYFLELLTDALEDTKKFHNDKRAALRAALHYGEMDDFLVAKMILCGIPLGESFLKARLSV 900
             +F+ +L +ALED     ++K AALR AL+YG+MDD +VA MI CGIPL E +L+ RLS+
Sbjct: 551  EFFMGILNNALEDAHGILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQHRLSI 610

Query: 901  LMRTELKSLKEGKLPMNDSYYLMGTADPTGILKPHQVCVILESGQVSGDILVYKHPGLHF 1080
            LM+ E KSLK GK+P+ +SYYLMGTADPTG+L+  +VC+IL+ GQ+SG++LVY++PGLH 
Sbjct: 611  LMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLVYRNPGLHV 670

Query: 1081 GDIHVLTATYVQELENYVGNAKYGIFFPIVGPRSIADEIANSDLDGDMYWVCRNPQLLNW 1260
            GDIH+L A YV+ELE++VGNAKY IFFP  GPRS+ADE++  D DGDM++V RNPQLL +
Sbjct: 671  GDIHILKAKYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPQLLGY 730

Query: 1261 FRPSTPWTQKHFAKNVPQSKPADFSDEDRLEHYLFEKFLAARFS-SNNVGVAAICWLSLM 1437
            F+ + PWT      NVP  KP++FSDE+ LE  LF+ FL  RF  S+ VGVAA  WL++M
Sbjct: 731  FKQTEPWTPSTSTPNVPNRKPSEFSDEE-LEVELFKLFLRNRFQPSSTVGVAADSWLAMM 789

Query: 1438 DTRLTLDESNAEKIKEVEDKLLHLTDIYYDALDVAK-SGKKIVIPPKLRQQKTPHFMQNK 1614
            D  LTL     E+I  V++ +  L DIYYDALD  K  G++I +P  L+ +  PHFM   
Sbjct: 790  DRVLTLGNDCTEEIACVKENINLLIDIYYDALDAPKRGGRRIEVPEGLKAELFPHFM--- 846

Query: 1615 SPGSSGLNNSAQSWRKDNSYQSTSILGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPED 1794
                 G N       +  +Y+STSILG+I+D+V+A+E+  +    +V KLP F+  V E 
Sbjct: 847  -----GKN-------EKQTYRSTSILGKIYDKVKAYEDM-DLSSNDVWKLPCFDDEVQEL 893

Query: 1795 RIAFWTEQHNMYRTEMRHALNNEAVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQS 1974
             +  W E +  YR EM  AL            G ++N  +  V +KYK++LY A E + S
Sbjct: 894  YLVKWKELYGQYRKEMCIALK----------AGEESNDKANEVIKKYKELLYEAAEFNLS 943

Query: 1975 PRKEEDIYT*TLLPYIMS 2028
             R++E+I+   +  Y +S
Sbjct: 944  KRRDEEIFEEAVALYQVS 961