BLASTX nr result

ID: Papaver30_contig00041143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00041143
         (890 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18897.3| unnamed protein product [Vitis vinifera]              368   4e-99
ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mi...   364   4e-98
ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mi...   360   8e-97
ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mi...   359   1e-96
ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mi...   359   1e-96
ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mi...   354   4e-95
ref|XP_009778087.1| PREDICTED: tRNA pseudouridine synthase A, mi...   352   2e-94
emb|CDP07323.1| unnamed protein product [Coffea canephora]            352   2e-94
ref|XP_008452911.1| PREDICTED: tRNA pseudouridine synthase A, mi...   351   4e-94
ref|XP_009589249.1| PREDICTED: tRNA pseudouridine synthase A, mi...   351   5e-94
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   350   1e-93
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK...   348   2e-93
ref|XP_003610360.1| tRNA pseudouridine synthase A, related prote...   348   2e-93
ref|XP_003610356.1| tRNA pseudouridine synthase A, related prote...   348   2e-93
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu...   348   3e-93
ref|XP_011003107.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   344   4e-92
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   344   6e-92
gb|KDO84995.1| hypothetical protein CISIN_1g045140mg, partial [C...   343   1e-91
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|...   343   1e-91
ref|XP_011034929.1| PREDICTED: tRNA pseudouridine synthase A, mi...   342   3e-91

>emb|CBI18897.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  368 bits (944), Expect = 4e-99
 Identities = 188/301 (62%), Positives = 223/301 (74%), Gaps = 5/301 (1%)
 Frame = -1

Query: 890 RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
           RFY+DPPG ++RLNS+LP QIR+FGFKRVT SF++KKFCDRRRYVYLIPVFALD S+HPD
Sbjct: 57  RFYIDPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPD 116

Query: 710 RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGID-----VVAQTET 546
           RESVLAS+GSENEL KCLEC +RGRKV+G+MGKRK  ESK +   GI       +  +E 
Sbjct: 117 RESVLASVGSENELVKCLECSERGRKVVGIMGKRKG-ESKNIVQLGIPSNDEAAIVNSEV 175

Query: 545 TETESGFVLNNDGTENENVELESKDSXXXXXXXXXXXXXXXXXXVKNSNGDGKAGKKSVF 366
            E       NN+   N ++    K+                     +S G+ K  K S F
Sbjct: 176 QEEIKATSNNNNIDANNSISETIKEEAAKL----------------SSEGENKLEKGSGF 219

Query: 365 SYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKC 186
            YG+KE+E+FNRIL  YVGTHNFHNFTTR KAEDP+A+RFI+SFD NT+V VEG++FVKC
Sbjct: 220 CYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKC 279

Query: 185 EVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFT 6
           EVVGQSFMLHQIRKM+GLAVA+MR  APESL++ AL KDVN   PTAPEVGLYLDECFF+
Sbjct: 280 EVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFS 339

Query: 5   S 3
           S
Sbjct: 340 S 340


>ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Solanum tuberosum]
          Length = 569

 Score =  364 bits (935), Expect = 4e-98
 Identities = 194/301 (64%), Positives = 225/301 (74%), Gaps = 5/301 (1%)
 Frame = -1

Query: 890 RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
           RFYVDPPGFIDRLNS L  QIR+FGFKRVTN+FS+KKFCD+RRYVYL+PVFALD  AH D
Sbjct: 123 RFYVDPPGFIDRLNSILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFALDPYAHRD 182

Query: 710 RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKI--IESKTLEVDGIDVVAQTETTET 537
           RESVLASLGS  EL+KCL CP+RGRKV+GVMG+R    I    + VD   V A   TT+T
Sbjct: 183 RESVLASLGSGKELAKCLNCPERGRKVVGVMGRRVFDPITQSVIIVDAPVVNANDPTTDT 242

Query: 536 ESGFVLNNDGTENENVELESKDSXXXXXXXXXXXXXXXXXXVKNSNGDGKAGKK---SVF 366
               V+ N+ + +E VE  + +                   V+ SN + K  ++   SVF
Sbjct: 243 N--MVIENEASLSEKVEERNGE-------------------VEGSNENAKMEEQVEESVF 281

Query: 365 SYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKC 186
            YGEKEKE+FNRIL  Y GTHNFHNFTTRTKA+DPAAKR+IISF+ANTVVNV+G+DFVKC
Sbjct: 282 CYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFNANTVVNVDGIDFVKC 341

Query: 185 EVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFT 6
           EVVGQSFMLHQIRKM+GLAVA+MR  APESLI  A ++DVN   P APEVGLYLDECFFT
Sbjct: 342 EVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIVTAFRRDVNINVPMAPEVGLYLDECFFT 401

Query: 5   S 3
           S
Sbjct: 402 S 402


>ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Solanum
           lycopersicum]
          Length = 598

 Score =  360 bits (924), Expect = 8e-97
 Identities = 189/298 (63%), Positives = 220/298 (73%), Gaps = 2/298 (0%)
 Frame = -1

Query: 890 RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
           RFYVDPPGFIDRLNS L  QIR+FGFKRVTN+FS+KKFCD+RRYVYL+PVFALD  AH D
Sbjct: 122 RFYVDPPGFIDRLNSILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFALDPYAHRD 181

Query: 710 RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKI--IESKTLEVDGIDVVAQTETTET 537
           RESVLASLGS  EL KCL CP+RGRKV GVMG+R    I    + VD   V A   TT+T
Sbjct: 182 RESVLASLGSGKELVKCLNCPERGRKVAGVMGRRVFDPITQSVIIVDAPVVTANDPTTDT 241

Query: 536 ESGFVLNNDGTENENVELESKDSXXXXXXXXXXXXXXXXXXVKNSNGDGKAGKKSVFSYG 357
               ++ N+ + +E VE                         +N+  + +  ++SVF YG
Sbjct: 242 N--MIIENEASLSEKVE---------------ERIDVVERSDENAKKEEQV-EESVFCYG 283

Query: 356 EKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVV 177
           EKEKE+FNRIL  + GTHNFHNFTTRTKA+DPAAKRFIISF+ANTVVNV+G+DFVKCEV+
Sbjct: 284 EKEKERFNRILKYFEGTHNFHNFTTRTKADDPAAKRFIISFNANTVVNVDGIDFVKCEVI 343

Query: 176 GQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 3
           GQSFMLHQIRKM+GLAVA+MR  APESLI  A ++DVN   P APEVGLYLDECFFTS
Sbjct: 344 GQSFMLHQIRKMIGLAVAIMRNCAPESLIVTAFRRDVNINVPMAPEVGLYLDECFFTS 401


>ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X2
           [Cicer arietinum]
          Length = 475

 Score =  359 bits (922), Expect = 1e-96
 Identities = 187/305 (61%), Positives = 220/305 (72%), Gaps = 9/305 (2%)
 Frame = -1

Query: 890 RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
           RFY+DPPGF+DRLNS+LP QIR+FG+KRVT SFS+KKFCDRRRYVYLIPVFALD   H D
Sbjct: 96  RFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRD 155

Query: 710 RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGIDVVAQTETTETES 531
           RE+VLASLGSENEL KCLEC +RGRKV G++G  K    + LE++ +DV    +  +  S
Sbjct: 156 RETVLASLGSENELVKCLECSERGRKVEGLVGNSK----RNLELEAMDVETTDKGDDNRS 211

Query: 530 GFVLNNDGTENENVE-LESKDSXXXXXXXXXXXXXXXXXXVKNS--------NGDGKAGK 378
                ND     +VE + SK S                    NS        NG+    K
Sbjct: 212 NKESINDNEGKVSVEDVNSKTSFETVVSGQDEVSPLNGGSENNSAVLEEEKVNGEDTPAK 271

Query: 377 KSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVD 198
           +S F YGEKE+E+FN+IL  YVGTHNFHNFTTR K EDP+AKRFIISFDA+  V +EG++
Sbjct: 272 RSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRFIISFDASNTVVIEGME 331

Query: 197 FVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDE 18
           FVKCE+VGQSFMLHQIRKM+GLAVA+MR  APESLI+ ALQ DV+ T PTAPEVGLYLDE
Sbjct: 332 FVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQTDVSITVPTAPEVGLYLDE 391

Query: 17  CFFTS 3
           CFFTS
Sbjct: 392 CFFTS 396


>ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X1
            [Cicer arietinum]
          Length = 505

 Score =  359 bits (922), Expect = 1e-96
 Identities = 187/305 (61%), Positives = 220/305 (72%), Gaps = 9/305 (2%)
 Frame = -1

Query: 890  RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
            RFY+DPPGF+DRLNS+LP QIR+FG+KRVT SFS+KKFCDRRRYVYLIPVFALD   H D
Sbjct: 126  RFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRD 185

Query: 710  RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGIDVVAQTETTETES 531
            RE+VLASLGSENEL KCLEC +RGRKV G++G  K    + LE++ +DV    +  +  S
Sbjct: 186  RETVLASLGSENELVKCLECSERGRKVEGLVGNSK----RNLELEAMDVETTDKGDDNRS 241

Query: 530  GFVLNNDGTENENVE-LESKDSXXXXXXXXXXXXXXXXXXVKNS--------NGDGKAGK 378
                 ND     +VE + SK S                    NS        NG+    K
Sbjct: 242  NKESINDNEGKVSVEDVNSKTSFETVVSGQDEVSPLNGGSENNSAVLEEEKVNGEDTPAK 301

Query: 377  KSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVD 198
            +S F YGEKE+E+FN+IL  YVGTHNFHNFTTR K EDP+AKRFIISFDA+  V +EG++
Sbjct: 302  RSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRFIISFDASNTVVIEGME 361

Query: 197  FVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDE 18
            FVKCE+VGQSFMLHQIRKM+GLAVA+MR  APESLI+ ALQ DV+ T PTAPEVGLYLDE
Sbjct: 362  FVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQTDVSITVPTAPEVGLYLDE 421

Query: 17   CFFTS 3
            CFFTS
Sbjct: 422  CFFTS 426


>ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Fragaria vesca subsp. vesca]
          Length = 591

 Score =  354 bits (909), Expect = 4e-95
 Identities = 188/298 (63%), Positives = 216/298 (72%), Gaps = 2/298 (0%)
 Frame = -1

Query: 890 RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
           RFYVDPPGF+DRLNSHL  QIR+FG+KRVT SF++KKFCDRRRYVYLIPVFALD SAH D
Sbjct: 123 RFYVDPPGFVDRLNSHLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSAHRD 182

Query: 710 RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGIDVVAQTETTE--T 537
           RESV ASLGS+ E  KCLEC DRGRKV G+MGKR      T ++ G +       TE  T
Sbjct: 183 RESVKASLGSDEEFVKCLECSDRGRKVGGLMGKR------TYQLRGGNSYNSESVTEIST 236

Query: 536 ESGFVLNNDGTENENVELESKDSXXXXXXXXXXXXXXXXXXVKNSNGDGKAGKKSVFSYG 357
                ++ND    +NV + + D                      + G+ KA + S F YG
Sbjct: 237 NDDMKIDNDIEGEDNVVVGNADMNSAEEV---------------NGGEKKAVEGSGFCYG 281

Query: 356 EKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVV 177
           EKEKE+FNRILS Y GTHNFHNFTTRTKAEDPAA R+IISF AN  V VEG++FVKCEVV
Sbjct: 282 EKEKERFNRILSCYQGTHNFHNFTTRTKAEDPAAIRYIISFSANATVTVEGIEFVKCEVV 341

Query: 176 GQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 3
           GQSFMLHQIRK++GLAVA+MR  APESL++ ALQKDVN   PTAPEVGLYLDECFF+S
Sbjct: 342 GQSFMLHQIRKLIGLAVAIMRNCAPESLLERALQKDVNVNVPTAPEVGLYLDECFFSS 399


>ref|XP_009778087.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Nicotiana
            sylvestris]
          Length = 596

 Score =  352 bits (904), Expect = 2e-94
 Identities = 188/304 (61%), Positives = 221/304 (72%), Gaps = 8/304 (2%)
 Frame = -1

Query: 890  RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
            RFYVDPPGFIDRLNS L  QIR+FGFKRVTN+F++KKFCDRRRYVY +PVFALD S+H D
Sbjct: 124  RFYVDPPGFIDRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVPVFALDPSSHRD 183

Query: 710  RESVLASLGSENELSKCLECPDRGRKVLGVMGKR---KIIESKTLEVDGIDVV----AQT 552
            RE+VLAS+GS  EL KCLEC +RGRKV GVMGKR    I +S  +  +  ++     AQ 
Sbjct: 184  RETVLASVGSGKELVKCLECSERGRKVFGVMGKRVYDPITKSVIVVAEPGNMPNNGDAQV 243

Query: 551  ETTETESGFVLN-NDGTENENVELESKDSXXXXXXXXXXXXXXXXXXVKNSNGDGKAGKK 375
                 ES   +N ND     N+ +E+  S                   +N+    +  ++
Sbjct: 244  TLQNIESNVNVNANDVITESNMVIENGASLSEKGEETKEEVEKGD---ENAKAIEEQVEE 300

Query: 374  SVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDF 195
            SVFSYGEKEKE+FNRIL  Y GTHNFHNFTTRTKA+DPAAKR+IISF ANT+VNVEG++F
Sbjct: 301  SVFSYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFTANTIVNVEGIEF 360

Query: 194  VKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDEC 15
            VKCEVVGQSFMLHQIRKM+GLAVA+MR  APESLI  A ++DVN   P APEVGLYLDEC
Sbjct: 361  VKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRRDVNINVPMAPEVGLYLDEC 420

Query: 14   FFTS 3
            FFTS
Sbjct: 421  FFTS 424


>emb|CDP07323.1| unnamed protein product [Coffea canephora]
          Length = 423

 Score =  352 bits (904), Expect = 2e-94
 Identities = 188/298 (63%), Positives = 218/298 (73%), Gaps = 2/298 (0%)
 Frame = -1

Query: 890 RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
           RFYVDPPG + RLNS LP QIR+FG+KRVT SF++KKFCDRRRYVYLIPVFALD S H D
Sbjct: 57  RFYVDPPGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRD 116

Query: 710 RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGIDVVAQTETTETES 531
           RESVLASLGSENEL KCLEC +RGRKV G+MGKR   +SK     G+DV       + ES
Sbjct: 117 RESVLASLGSENELVKCLECSERGRKVEGIMGKRNF-DSKI----GLDV------GKLES 165

Query: 530 GFVLNND--GTENENVELESKDSXXXXXXXXXXXXXXXXXXVKNSNGDGKAGKKSVFSYG 357
           G   NN   GT  E ++  S  +                    N   + KA KKS F YG
Sbjct: 166 GISSNNQDAGTTEEKIKDFSLGANNGGFDIEKTEEDEVLVQDVNQE-EVKAIKKSDFRYG 224

Query: 356 EKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVV 177
           E+E+E+FNR+L  Y GTHNFHNFTTRTKAEDPAA+R+IISFDA T VNVEG++FVKCEV+
Sbjct: 225 EEERERFNRVLQYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFVKCEVI 284

Query: 176 GQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 3
           GQSFMLHQIRKM+GLAVA+MR  APESLI+ A ++DV+   P APEVGLYLDECFF+S
Sbjct: 285 GQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFRQDVDINVPMAPEVGLYLDECFFSS 342


>ref|XP_008452911.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            melo] gi|659104353|ref|XP_008452912.1| PREDICTED: tRNA
            pseudouridine synthase A, mitochondrial-like [Cucumis
            melo] gi|307136307|gb|ADN34131.1| tRNA pseudouridine
            synthase family protein [Cucumis melo subsp. melo]
          Length = 519

 Score =  351 bits (901), Expect = 4e-94
 Identities = 187/312 (59%), Positives = 221/312 (70%), Gaps = 16/312 (5%)
 Frame = -1

Query: 890  RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
            RFY+DPPGF+DRLNS+L  QIR+FG+KRVT SF++KKFCDRRRYVYLIPVFALD + H D
Sbjct: 127  RFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRD 186

Query: 710  RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKI-IESKTLEVD-GIDVVAQTETTET 537
            RESV ASLGS+NEL KCLEC +RGRKV G+MGKR   +++   E D   ++V   E ++ 
Sbjct: 187  RESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTAITESDISSNIVNAIEVSDV 246

Query: 536  ESGFVLNNDGT------------ENENVELE--SKDSXXXXXXXXXXXXXXXXXXVKNSN 399
            ++  VL +  T            EN   EL   S+                    V   +
Sbjct: 247  QANGVLEDSATTSDSNKQTSVLVENTATELTVASEGIAKSESSEMSGLGNDSEIVVSKES 306

Query: 398  GDGKAGKKSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTV 219
             +GK      F YGE+EK +FNRIL  YVGTHNFHNFTTRTKAEDPAA+RFI+SFDA+T 
Sbjct: 307  VNGKEKPSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASTT 366

Query: 218  VNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPE 39
            V VEG++FVKCEVVGQSFMLHQIRKM+GLAVA+MR  APESLI+ ALQKDVN   PTAPE
Sbjct: 367  VVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPE 426

Query: 38   VGLYLDECFFTS 3
            VGLYLDEC FTS
Sbjct: 427  VGLYLDECLFTS 438


>ref|XP_009589249.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Nicotiana tomentosiformis]
          Length = 596

 Score =  351 bits (900), Expect = 5e-94
 Identities = 188/316 (59%), Positives = 222/316 (70%), Gaps = 20/316 (6%)
 Frame = -1

Query: 890  RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
            RFYVDPPGFIDRLNS L  QIR+FGFKRVTN+F++KKFCDRRRYVY +PVFALD S+H D
Sbjct: 124  RFYVDPPGFIDRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVPVFALDPSSHRD 183

Query: 710  RESVLASLGSENELSKCLECPDRGRKVLGVMGKRK--------IIESK------------ 591
            RE+VLAS+GS  EL KCLEC +RGRKV GVMGKR         I+ ++            
Sbjct: 184  RETVLASVGSGKELVKCLECSERGRKVFGVMGKRVFDPITKSVIVVAEPCNMPNTGDAQL 243

Query: 590  TLEVDGIDVVAQTETTETESGFVLNNDGTENENVELESKDSXXXXXXXXXXXXXXXXXXV 411
            TL+    +V        TES  V+ N  + +E VE E+K+                    
Sbjct: 244  TLQNTESNVNVNANDVITESNMVIENGASVSEKVE-ETKEEVEKGD-------------- 288

Query: 410  KNSNGDGKAGKKSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFD 231
            +N+    +  ++SVF YGEKEKE+FNRIL  Y GTHNFHNFTTRTKA+DPAAKR+IISF 
Sbjct: 289  ENAKTVEEQVEESVFCYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFT 348

Query: 230  ANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAP 51
            ANT+VNVE ++FVKCEVVGQSFMLHQIRKM+GLAVA+MR  APESLI  A ++DVN   P
Sbjct: 349  ANTIVNVESIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRRDVNINVP 408

Query: 50   TAPEVGLYLDECFFTS 3
             APEVGLYLDECFFTS
Sbjct: 409  MAPEVGLYLDECFFTS 424


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            sativus] gi|700200317|gb|KGN55475.1| hypothetical protein
            Csa_4G652870 [Cucumis sativus]
          Length = 519

 Score =  350 bits (897), Expect = 1e-93
 Identities = 185/312 (59%), Positives = 221/312 (70%), Gaps = 16/312 (5%)
 Frame = -1

Query: 890  RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
            RFY+DPPGF+DRLNS+L  QIR+FG+KRVT SF++KKFCDRRRYVYLIPVFALD + H D
Sbjct: 127  RFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRD 186

Query: 710  RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKI-IESKTLEVD-GIDVVAQTETTET 537
            RESV ASLGS+NEL KCLEC +RGRKV G++GKR   +++   E D   + V   E ++ 
Sbjct: 187  RESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAITESDISSNTVNAIEVSDV 246

Query: 536  ESGFVLNNDGT------------ENENVELE--SKDSXXXXXXXXXXXXXXXXXXVKNSN 399
            ++  VL +  T            EN   EL   S+ +                  V   +
Sbjct: 247  QANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSESSEMSGLGSDSEIVVSKES 306

Query: 398  GDGKAGKKSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTV 219
             +GK      F YGE+EK +FNRIL  YVGTHNFHNFTTRTKAEDPAA+RFI+SFDA+ +
Sbjct: 307  VNGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASAI 366

Query: 218  VNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPE 39
            V VEG++FVKCEVVGQSFMLHQIRKM+GLAVA+MR  APESLI+ ALQKDVN   PTAPE
Sbjct: 367  VVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPE 426

Query: 38   VGLYLDECFFTS 3
            VGLYLDEC FTS
Sbjct: 427  VGLYLDECLFTS 438


>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
            [Medicago truncatula]
          Length = 530

 Score =  348 bits (894), Expect = 2e-93
 Identities = 188/325 (57%), Positives = 218/325 (67%), Gaps = 29/325 (8%)
 Frame = -1

Query: 890  RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
            RFY+DPPGF+DRLNS+LP QIR+FGFKRVT SFS+KKFCDRRRYVYLIPVFALD   H D
Sbjct: 126  RFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRD 185

Query: 710  RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGIDVVAQTETTETES 531
            RE+VLASLGSENEL KCL C +RGRKV GV+G  K    + LE++ +DV    E   +  
Sbjct: 186  RETVLASLGSENELVKCLPCSERGRKVEGVVGNSK----RNLELEAVDV----ENGSSNK 237

Query: 530  GFVLNNDGTENENVELESKDSXXXXXXXXXXXXXXXXXXVKNS----------------- 402
              V+++  T++  V L   D                     NS                 
Sbjct: 238  NDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQDEVAPINGGS 297

Query: 401  ------------NGDGKAGKKSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPA 258
                        N +  A   S F YGEKE+E+FN IL  YVGTHNFHNFTTR K EDP+
Sbjct: 298  ENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPS 357

Query: 257  AKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVAL 78
            AKRFIISFDA+T V VEG++FVKCE+VGQSFMLHQIRKM+GLAVA+MR  APESLI+ AL
Sbjct: 358  AKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL 417

Query: 77   QKDVNFTAPTAPEVGLYLDECFFTS 3
            QKDV+ T PTAPEVGLYLDECFFTS
Sbjct: 418  QKDVSITVPTAPEVGLYLDECFFTS 442


>ref|XP_003610360.1| tRNA pseudouridine synthase A, related protein [Medicago truncatula]
            gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
            A, related protein [Medicago truncatula]
            gi|388510220|gb|AFK43176.1| unknown [Medicago truncatula]
          Length = 530

 Score =  348 bits (894), Expect = 2e-93
 Identities = 188/325 (57%), Positives = 218/325 (67%), Gaps = 29/325 (8%)
 Frame = -1

Query: 890  RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
            RFY+DPPGF+DRLNS+LP QIR+FGFKRVT SFS+KKFCDRRRYVYLIPVFALD   H D
Sbjct: 126  RFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRD 185

Query: 710  RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGIDVVAQTETTETES 531
            RE+VLASLGSENEL KCL C +RGRKV GV+G  K    + LE++ +DV    E   +  
Sbjct: 186  RETVLASLGSENELVKCLPCSERGRKVEGVVGNSK----RNLELEAVDV----ENGSSNK 237

Query: 530  GFVLNNDGTENENVELESKDSXXXXXXXXXXXXXXXXXXVKNS----------------- 402
              V+++  T++  V L   D                     NS                 
Sbjct: 238  NDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQDEVAPINGGS 297

Query: 401  ------------NGDGKAGKKSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPA 258
                        N +  A   S F YGEKE+E+FN IL  YVGTHNFHNFTTR K EDP+
Sbjct: 298  ENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPS 357

Query: 257  AKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVAL 78
            AKRFIISFDA+T V VEG++FVKCE+VGQSFMLHQIRKM+GLAVA+MR  APESLI+ AL
Sbjct: 358  AKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL 417

Query: 77   QKDVNFTAPTAPEVGLYLDECFFTS 3
            QKDV+ T PTAPEVGLYLDECFFTS
Sbjct: 418  QKDVSITVPTAPEVGLYLDECFFTS 442


>ref|XP_003610356.1| tRNA pseudouridine synthase A, related protein [Medicago truncatula]
            gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
            A, related protein [Medicago truncatula]
          Length = 530

 Score =  348 bits (894), Expect = 2e-93
 Identities = 188/325 (57%), Positives = 218/325 (67%), Gaps = 29/325 (8%)
 Frame = -1

Query: 890  RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
            RFY+DPPGF+DRLNS+LP QIR+FGFKRVT SFS+KKFCDRRRYVYLIPVFALD   H D
Sbjct: 126  RFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRD 185

Query: 710  RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGIDVVAQTETTETES 531
            RE+VLASLGSENEL KCL C +RGRKV GV+G  K    + LE++ +DV    E   +  
Sbjct: 186  RETVLASLGSENELVKCLPCSERGRKVEGVVGNSK----RNLELEAVDV----ENGSSNK 237

Query: 530  GFVLNNDGTENENVELESKDSXXXXXXXXXXXXXXXXXXVKNS----------------- 402
              V+++  T++  V L   D                     NS                 
Sbjct: 238  NDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDEDEVAPINGGS 297

Query: 401  ------------NGDGKAGKKSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPA 258
                        N +  A   S F YGEKE+E+FN IL  YVGTHNFHNFTTR K EDP+
Sbjct: 298  ENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPS 357

Query: 257  AKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVAL 78
            AKRFIISFDA+T V VEG++FVKCE+VGQSFMLHQIRKM+GLAVA+MR  APESLI+ AL
Sbjct: 358  AKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL 417

Query: 77   QKDVNFTAPTAPEVGLYLDECFFTS 3
            QKDV+ T PTAPEVGLYLDECFFTS
Sbjct: 418  QKDVSITVPTAPEVGLYLDECFFTS 442


>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
           gi|550339814|gb|EEE94755.2| hypothetical protein
           POPTR_0005s26830g [Populus trichocarpa]
          Length = 497

 Score =  348 bits (893), Expect = 3e-93
 Identities = 178/296 (60%), Positives = 219/296 (73%)
 Frame = -1

Query: 890 RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
           RFY+DPPG ++RL+S+L  QIR+FG+KRVT SF++KKFCDRRRYVYLIPVFAL+  +H D
Sbjct: 126 RFYIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALNPCSHRD 185

Query: 710 RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGIDVVAQTETTETES 531
           RESVLASLGS +EL KCL+C +RGRKV+G +GKR   ESK+        V+ TE    + 
Sbjct: 186 RESVLASLGSGSELVKCLQCSERGRKVVGAVGKRSF-ESKS-------DVSPTEIWSNDK 237

Query: 530 GFVLNNDGTENENVELESKDSXXXXXXXXXXXXXXXXXXVKNSNGDGKAGKKSVFSYGEK 351
              L ++  E  ++   S+D+                   KN+  + +A K S F YGEK
Sbjct: 238 DTTLKSEIKEEVSISSNSEDANANPEIKDEIMVSIENGDDKNTKSEEEAIKGSGFCYGEK 297

Query: 350 EKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQ 171
           EKE+FNRIL+ Y+G+HNFHNFTTRTKAEDP+A+R+IISFDA T V VEG++FVKCEVVGQ
Sbjct: 298 EKERFNRILNYYLGSHNFHNFTTRTKAEDPSAQRYIISFDAKTTVAVEGIEFVKCEVVGQ 357

Query: 170 SFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 3
           SFMLHQIRKM+G+AVA+MR  A ESLI  ALQK+VN   PTAPEVGLYLDECFFTS
Sbjct: 358 SFMLHQIRKMIGVAVAIMRNCASESLIQTALQKNVNINVPTAPEVGLYLDECFFTS 413


>ref|XP_011003107.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
            mitochondrial [Populus euphratica]
          Length = 538

 Score =  344 bits (883), Expect = 4e-92
 Identities = 181/325 (55%), Positives = 218/325 (67%), Gaps = 29/325 (8%)
 Frame = -1

Query: 890  RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
            RFY+DPPG ++RL+S+L  QIR+FG+KRVT SF++KKFCDRRRYVYLIPVFAL+  +H D
Sbjct: 126  RFYIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALNPCSHRD 185

Query: 710  RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGI-----DVVAQTET 546
            RESVLASLGS +EL KCL+C +RGRKV+G +GKR       +    I     D   + E 
Sbjct: 186  RESVLASLGSGSELVKCLQCSERGRKVVGAVGKRSFESKSDVSPTEIWSNDKDTTLKYEI 245

Query: 545  TETESGFVLNNDG------------------------TENENVELESKDSXXXXXXXXXX 438
             E  SG + N DG                        T    +   S+D+          
Sbjct: 246  KEEVSGLMDNGDGDIRNSEPVDETKVFQNEDSGKKSETTESGISSNSEDANANPEIKDEM 305

Query: 437  XXXXXXXXVKNSNGDGKAGKKSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPA 258
                     KN+  + +A K S F YGEKEKE+FNRIL+ YVG+HNFHNFTTRTKAEDP+
Sbjct: 306  MVSIENGDDKNTKSEEEAIKGSGFCYGEKEKERFNRILNYYVGSHNFHNFTTRTKAEDPS 365

Query: 257  AKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVAL 78
            A+R+IISFDA T V VEG++FVKCEVVGQSFMLHQIRKM+G+AVA+MR  A ESLI  AL
Sbjct: 366  AQRYIISFDAKTTVTVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCASESLIQTAL 425

Query: 77   QKDVNFTAPTAPEVGLYLDECFFTS 3
            QK+VN   PTAPEVGLYLDECFFTS
Sbjct: 426  QKNVNINVPTAPEVGLYLDECFFTS 450


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
            gi|557537401|gb|ESR48519.1| hypothetical protein
            CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  344 bits (882), Expect = 6e-92
 Identities = 185/326 (56%), Positives = 225/326 (69%), Gaps = 30/326 (9%)
 Frame = -1

Query: 890  RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
            RF +DPPG ++RLNS+LP QIR+FG+KRVT SF++KKFCD+RRYVYL+PVFALDSS+H D
Sbjct: 132  RFCIDPPGLVERLNSNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFALDSSSHRD 191

Query: 710  RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKII-------ESKTLEVD-GIDVVAQ 555
            RESV+ASLGS NEL KCLEC +RGRKV+GVMGKR          E+ +L     +D V  
Sbjct: 192  RESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQVKVDTVVS 251

Query: 554  T-------------ETTETESGFVL---------NNDGTENENVELESKDSXXXXXXXXX 441
            T             E+ +T S  V+         N    E+   E    ++         
Sbjct: 252  TCNGDRHNTNLESVESNKTISESVMVENANSESVNETLVESRTSETVQNENTDLSLDLDS 311

Query: 440  XXXXXXXXXVKNSNGDGKAGKKSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDP 261
                      ++ NG+ K  K S F YGE+EK++FNRIL  YVG+HNFHNFTTRTKAEDP
Sbjct: 312  KNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSHNFHNFTTRTKAEDP 371

Query: 260  AAKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVA 81
            +A+R+IISF A++VVNVEG+DF+KCEVVGQSFMLHQIRKM+GLAVAV+R  APESLI+ A
Sbjct: 372  SARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVRNCAPESLIETA 431

Query: 80   LQKDVNFTAPTAPEVGLYLDECFFTS 3
            LQKDVN   PTAPEVGLYLDEC F S
Sbjct: 432  LQKDVNINVPTAPEVGLYLDECIFAS 457


>gb|KDO84995.1| hypothetical protein CISIN_1g045140mg, partial [Citrus sinensis]
          Length = 468

 Score =  343 bits (879), Expect = 1e-91
 Identities = 184/326 (56%), Positives = 225/326 (69%), Gaps = 30/326 (9%)
 Frame = -1

Query: 890  RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
            RF +DPPG ++RLNS+LP QIR+FG+KRVT SF++KKFCD+RRYVYL+PVFALDSS+H D
Sbjct: 132  RFCIDPPGLVERLNSNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFALDSSSHRD 191

Query: 710  RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKII-------ESKTLEVD-GIDVVAQ 555
            RESV+ASLGS NEL KCLEC +RGRKV+GVMGKR          E+ +L     +D V  
Sbjct: 192  RESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQVKVDTVVS 251

Query: 554  T-------------ETTETESGFVL---------NNDGTENENVELESKDSXXXXXXXXX 441
            T             E+ +T S  V+         N    E+   E    ++         
Sbjct: 252  TCNGDRHNTNLESVESNKTISESVMVENANSESVNETLVESRTSETVQNENTDLSLDLDS 311

Query: 440  XXXXXXXXXVKNSNGDGKAGKKSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDP 261
                      ++ NG+ K  K S F YGE+EK++FNRIL  YVG+HNFHNFTTRTKAEDP
Sbjct: 312  KNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSHNFHNFTTRTKAEDP 371

Query: 260  AAKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVA 81
            +A+R+IISF A++VVNVEG+DF+KCEVVGQSFMLHQIRKM+GLAVAV+R  AP+SLI+ A
Sbjct: 372  SARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVRNCAPQSLIETA 431

Query: 80   LQKDVNFTAPTAPEVGLYLDECFFTS 3
            LQKDVN   PTAPEVGLYLDEC F S
Sbjct: 432  LQKDVNINVPTAPEVGLYLDECIFAS 457


>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao]
           gi|508726926|gb|EOY18823.1| Pseudouridine synthase
           [Theobroma cacao]
          Length = 507

 Score =  343 bits (879), Expect = 1e-91
 Identities = 181/296 (61%), Positives = 209/296 (70%)
 Frame = -1

Query: 890 RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
           RFY+DPPG ++RLN  LP QIR+FG+KRVT SF+SKKFCDRRRYVYLIPVFALD S H D
Sbjct: 130 RFYIDPPGLVERLNRILPAQIRIFGYKRVTASFNSKKFCDRRRYVYLIPVFALDPSCHRD 189

Query: 710 RESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGIDVVAQTETTETES 531
           RESVLASLGS NEL KCLEC +RGRKV GVMGKR      T+      V +   +   ES
Sbjct: 190 RESVLASLGSGNELVKCLECSERGRKVAGVMGKRSFEAKSTI------VHSDVSSNNGES 243

Query: 530 GFVLNNDGTENENVELESKDSXXXXXXXXXXXXXXXXXXVKNSNGDGKAGKKSVFSYGEK 351
           G V+      +E  E+                       V   N +    ++  F YGE+
Sbjct: 244 GNVIKEHNLTSELEEVTDSS------------VQNEFTEVDKVNVEKIPLEERRFCYGEE 291

Query: 350 EKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQ 171
           EK  FNRIL  YVG+HNFHNFTTRTKAEDP+A+R+I+SF ANTVVNVEG+DFVKCEVVGQ
Sbjct: 292 EKGLFNRILKHYVGSHNFHNFTTRTKAEDPSARRYIVSFHANTVVNVEGIDFVKCEVVGQ 351

Query: 170 SFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 3
           SFMLHQIRKM+G+AVAVMR  APESLI+ AL+KDV+   PTAPEVGLYLDEC F S
Sbjct: 352 SFMLHQIRKMIGMAVAVMRNCAPESLIETALRKDVSINVPTAPEVGLYLDECLFAS 407


>ref|XP_011034929.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Populus
            euphratica]
          Length = 534

 Score =  342 bits (876), Expect = 3e-91
 Identities = 179/321 (55%), Positives = 222/321 (69%), Gaps = 25/321 (7%)
 Frame = -1

Query: 890  RFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPVFALDSSAHPD 711
            RFY+DPPG ++RL+S+L  Q R+FG+KRVT SF++KKFCDRRRYVYLIPVFALD  +H D
Sbjct: 126  RFYIDPPGLVERLHSNLSPQFRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDPCSHRD 185

Query: 710  RESVLASLGSENELSKCLECPDRGRKVLGVMGKR------------------KIIESKTL 585
            RESVLASLGS +EL KCLEC +RGRKV G +GKR                  +I E   +
Sbjct: 186  RESVLASLGSGSELIKCLECSERGRKVAGAVGKRSFELTDISSNDKDASVKSEIKEEVGV 245

Query: 584  EVD-GIDVVAQTETTETESGFVLNNDGTENENVELE------SKDSXXXXXXXXXXXXXX 426
             +D G++ +  +ET       +  NDG  +++V  E      S+D+              
Sbjct: 246  HLDNGLEDIRNSETVNETK--IFQNDGCGSKSVMPEPVIPSNSEDANVNTENKDEIIVSV 303

Query: 425  XXXXVKNSNGDGKAGKKSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRF 246
                 + +    +  K+S F YGEKEKE+FNRIL  YVG+HNFHNFTTRTKAEDP+A+R+
Sbjct: 304  ENGDDEKTKSKEEMVKRSRFCYGEKEKERFNRILGYYVGSHNFHNFTTRTKAEDPSARRY 363

Query: 245  IISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDV 66
            ++SF+A T VNVEG++FVKCEVVGQSFMLHQIRKM+G+AVA+MR  APESLI  ALQKDV
Sbjct: 364  MVSFEAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIQTALQKDV 423

Query: 65   NFTAPTAPEVGLYLDECFFTS 3
            N   PTAPEVGLYLDEC FTS
Sbjct: 424  NINVPTAPEVGLYLDECLFTS 444


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