BLASTX nr result

ID: Papaver30_contig00040677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00040677
         (498 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266132.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_008231288.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-06
ref|XP_008231287.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-06

>ref|XP_010266132.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280
           isoform X1 [Nelumbo nucifera]
          Length = 830

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
 Frame = -1

Query: 258 MHRSLFRVPFRLFADSFYRLKVPKKGEKNVTHQRIQYIETNSKAYGRVRYEP-----KPI 94
           MHRSL R P RL ADSF++ K   K  +NV  +R++   T++ + G     P     + +
Sbjct: 1   MHRSLTRTPLRLIADSFFKSKAHGKRRRNVA-ERMESSLTSATSGGDTGNNPFGLKGESV 59

Query: 93  TYNLQVEIVNALRLGKRDEAVNLLWKLSSGS 1
           T + QV+IVNALR G+R+ A  +L  L  G+
Sbjct: 60  TGSTQVQIVNALRSGRRERASAMLSNLCYGN 90


>ref|XP_008231288.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like isoform X2 [Prunus mume]
          Length = 661

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
 Frame = -1

Query: 258 MHRSLFRVPFRLFADSFYRLKVPKKGEKNVTHQRIQYIETNSKAYGR--VRYEPKPITYN 85
           MHR L RVP R  ADS ++ + P+   + +   R++Y  T + + G   + +  + IT +
Sbjct: 1   MHRPLARVPLRSIADSLFKSQ-PQYHGRRIGPDRLEYSRTLTTSNGHEVLWHSAESITRS 59

Query: 84  LQVEIVNALRLGKRDEAVNLLWKLSSGS 1
           +Q++I++ALRLG+R +A NLL  L  G+
Sbjct: 60  MQIQIIDALRLGERGKASNLLLNLGHGN 87


>ref|XP_008231287.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like isoform X1 [Prunus mume]
          Length = 473

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
 Frame = -1

Query: 258 MHRSLFRVPFRLFADSFYRLKVPKKGEKNVTHQRIQYIETNSKAYGR--VRYEPKPITYN 85
           MHR L RVP R  ADS ++ + P+   + +   R++Y  T + + G   + +  + IT +
Sbjct: 1   MHRPLARVPLRSIADSLFKSQ-PQYHGRRIGPDRLEYSRTLTTSNGHEVLWHSAESITRS 59

Query: 84  LQVEIVNALRLGKRDEAVNLLWKLSSGS 1
           +Q++I++ALRLG+R +A NLL  L  G+
Sbjct: 60  MQIQIIDALRLGERGKASNLLLNLGHGN 87