BLASTX nr result

ID: Papaver30_contig00040418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00040418
         (692 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008438813.1| PREDICTED: RING finger and CHY zinc finger d...    59   3e-06
ref|XP_004134192.1| PREDICTED: RING finger and CHY zinc finger d...    59   3e-06

>ref|XP_008438813.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1 [Cucumis melo]
          Length = 271

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
 Frame = +3

Query: 3   NQYCCPICSKSVFDMSKAWKRIDEEV**LPIIYEYTPNKIALMGTFC---TYIYLLMLLS 173
           ++YCCPICSKSV DMSKAWK++DEE+    +  EY   K+ ++   C   T +Y  ++  
Sbjct: 192 DKYCCPICSKSVVDMSKAWKQLDEEIEATVMPEEYRHKKVWILCNDCNDTTEVYFHIIGQ 251

Query: 174 ICC 182
            CC
Sbjct: 252 KCC 254


>ref|XP_004134192.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1 [Cucumis sativus] gi|700201943|gb|KGN57076.1|
           hypothetical protein Csa_3G151540 [Cucumis sativus]
          Length = 271

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
 Frame = +3

Query: 3   NQYCCPICSKSVFDMSKAWKRIDEEV**LPIIYEYTPNKIALMGTFC---TYIYLLMLLS 173
           ++YCCPICSKSV DMSKAWK++DEE+    +  EY   K+ ++   C   T +Y  ++  
Sbjct: 192 DKYCCPICSKSVVDMSKAWKQLDEEIEATVMPEEYRHKKVWILCNDCNDTTEVYFHIIGQ 251

Query: 174 ICC 182
            CC
Sbjct: 252 KCC 254


Top