BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00040057
         (1998 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1127   0.0  
emb|CBI27412.3| unnamed protein product [Vitis vinifera]             1115   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1115   0.0  
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1112   0.0  
ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1102   0.0  
ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1100   0.0  
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob...  1100   0.0  
ref|XP_012438460.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1098   0.0  
ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1098   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1092   0.0  
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun...  1090   0.0  
emb|CDP00493.1| unnamed protein product [Coffea canephora]           1088   0.0  
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1087   0.0  
ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1087   0.0  
ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1087   0.0  
ref|XP_009627611.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1087   0.0  
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1087   0.0  
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]     1087   0.0  
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...  1085   0.0  
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]        1085   0.0  

>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1127 bits (2915), Expect = 0.0
 Identities = 537/650 (82%), Positives = 601/650 (92%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VGSRLIELL+Q+AYIQPP+DQLADGPPDIRPAF+H+L+TV K+ QK SRRYG+IECDPLV
Sbjct: 385  VGSRLIELLMQTAYIQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTSRRYGVIECDPLV 444

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+G+ERTARHMVIPYMPML+PP  W GYDKGAYLFLPSYVMRTHGA+QQREAVK+ P+KQ
Sbjct: 445  RKGLERTARHMVIPYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPRKQ 504

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + PVFEALDTLG+ KWRVNKR+L VVDR+WASGG+ A LV+R+DVP+PEEP TEDEAE++
Sbjct: 505  LEPVFEALDTLGNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPDTEDEAEIK 564

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       ENSERHS RCD+ELKLAVAR+MK EDGF+YPHNLDFRGRAYPMHPYLNH
Sbjct: 565  KWKWKVKAAKKENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAYPMHPYLNH 624

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLGKSGL+WLKIHLANL+ AGGVDKLSYEGRIAFTE++LD+IFD
Sbjct: 625  LGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLY-AGGVDKLSYEGRIAFTENHLDDIFD 683

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLA C+NLSEALRSSSPETTISH+PVHQDGSCNGLQHYAA
Sbjct: 684  SADRPLEGRRWWLNAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAA 743

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAAAVNLVAGEKPADVYSGIA RV +IM+ DA+KDP    N + A++LI  N V
Sbjct: 744  LGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHARILI--NQV 801

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTYIGARDQIK+RLKER+   +++E FG +CYAAK TLTALGEMF
Sbjct: 802  DRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNVIADDSELFGASCYAAKTTLTALGEMF 861

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            EAARSIMSWLGDCAK+IA +N PVRWTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETD
Sbjct: 862  EAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETD 921

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTHACD+DEMN+ILR
Sbjct: 922  KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHACDIDEMNKILR 981

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELYE+PILENLL SFQ+SFPTL FPPLPERGDF+L+EVL+SPYFFN
Sbjct: 982  EKFVELYEKPILENLLESFQQSFPTLNFPPLPERGDFDLREVLDSPYFFN 1031


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score = 1115 bits (2885), Expect = 0.0
 Identities = 535/650 (82%), Positives = 593/650 (91%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VGSRLIELL+++AYIQPP DQL DGPPDIRPAF HTL+TV K+ QK +RRYG+IECDPLV
Sbjct: 164  VGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLV 223

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+G+E+TARHMVIPYMPML+PP  W GYDKGAYLFLPSYVMR HGA+QQREA+K+ P+K 
Sbjct: 224  RKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKA 283

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + P FEAL+TLG+ KWR+NKR+LGV+DR+WASGG+ A LV+R+DVPLPEEP TEDEAE+R
Sbjct: 284  LEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIR 343

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       ENSERHS RCD+ELKLAVARKMK EDGF+YPHNLDFRGRAYPMHPYLNH
Sbjct: 344  KWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNH 403

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLGKSGLRWLKIHLAN++ AGGVDKLSYEGR+AFTE++L++IFD
Sbjct: 404  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVY-AGGVDKLSYEGRVAFTENHLEDIFD 462

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLA C+NLSEALRSSSPETTISH+PVHQDGSCNGLQHYAA
Sbjct: 463  SADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAA 522

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAAAVNLVAGEKPADVYSGIA RV +IMQ DAQKDPA + N LRA+LLI +  V
Sbjct: 523  LGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQ--V 580

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTYIGARDQIK+RLKER    +E E F  +CYAAK TLTALGEMF
Sbjct: 581  DRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMF 640

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            EAARSIMSWLGDCAKVIA +NHPVRW TPLGLPVVQPYR+LGRHLIKTSLQVL+LQRETD
Sbjct: 641  EAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETD 700

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTHACDVDEMNRILR
Sbjct: 701  KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILR 760

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELY  PILENLL  FQ+SFPTL FPPLPERGDF+L+EVLESPYFFN
Sbjct: 761  EKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 810


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1115 bits (2885), Expect = 0.0
 Identities = 535/650 (82%), Positives = 593/650 (91%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VGSRLIELL+++AYIQPP DQL DGPPDIRPAF HTL+TV K+ QK +RRYG+IECDPLV
Sbjct: 332  VGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLV 391

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+G+E+TARHMVIPYMPML+PP  W GYDKGAYLFLPSYVMR HGA+QQREA+K+ P+K 
Sbjct: 392  RKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKA 451

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + P FEAL+TLG+ KWR+NKR+LGV+DR+WASGG+ A LV+R+DVPLPEEP TEDEAE+R
Sbjct: 452  LEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIR 511

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       ENSERHS RCD+ELKLAVARKMK EDGF+YPHNLDFRGRAYPMHPYLNH
Sbjct: 512  KWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNH 571

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLGKSGLRWLKIHLAN++ AGGVDKLSYEGR+AFTE++L++IFD
Sbjct: 572  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVY-AGGVDKLSYEGRVAFTENHLEDIFD 630

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLA C+NLSEALRSSSPETTISH+PVHQDGSCNGLQHYAA
Sbjct: 631  SADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAA 690

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAAAVNLVAGEKPADVYSGIA RV +IMQ DAQKDPA + N LRA+LLI +  V
Sbjct: 691  LGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQ--V 748

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTYIGARDQIK+RLKER    +E E F  +CYAAK TLTALGEMF
Sbjct: 749  DRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMF 808

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            EAARSIMSWLGDCAKVIA +NHPVRW TPLGLPVVQPYR+LGRHLIKTSLQVL+LQRETD
Sbjct: 809  EAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETD 868

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTHACDVDEMNRILR
Sbjct: 869  KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILR 928

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELY  PILENLL  FQ+SFPTL FPPLPERGDF+L+EVLESPYFFN
Sbjct: 929  EKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score = 1112 bits (2876), Expect = 0.0
 Identities = 531/650 (81%), Positives = 593/650 (91%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VGS LIELL+Q+AYIQ P DQLADGPPDIRPAF+HTL+T+ K+ QK SRRYG+IECDPLV
Sbjct: 344  VGSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLV 403

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+G+ERTARHMVIPYMPML+PP  W GYDKGAYLFLPSYVMRTHGA+QQREAVK+T +KQ
Sbjct: 404  RKGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQ 463

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + P+FEALDTLG+ KWR+NKR+LGVVDR+WASGG+ A LV+R+DVPLPEEP TEDEAEL+
Sbjct: 464  LEPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELK 523

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       ENSERHS RCD ELKLAVAR+MK E+GF+YPHNLDFRGRAYPMHPYLNH
Sbjct: 524  KWKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNH 583

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSYEGRIAFTE++LD+IFD
Sbjct: 584  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYEGRIAFTENHLDDIFD 642

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL A+DPFQCLAVC+NLSEALRS SPET ISHIP+HQDGSCNGLQHYAA
Sbjct: 643  SADRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCNGLQHYAA 702

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAAAVNLVAG+KPADVYSG+A RV +IM+ DAQKDP  + N + A+LLI  N V
Sbjct: 703  LGRDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARLLI--NQV 760

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTYIGARDQIK+RLKER+   +E+E FG +CYAAK T+TALGEMF
Sbjct: 761  DRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTITALGEMF 820

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            +AARSIMSWLGDCAK+IA +N PVRWTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETD
Sbjct: 821  KAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETD 880

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNF+HSLDGSHMMMTA+ACKRAGLNFAGVHDS+WTHACDVDEMN+ILR
Sbjct: 881  KVMVKRQRTAFPPNFIHSLDGSHMMMTAVACKRAGLNFAGVHDSFWTHACDVDEMNKILR 940

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELYE PI+ENLL SFQ+SFP L FPPLPE GDF+L EVL SPYFFN
Sbjct: 941  EKFVELYETPIMENLLESFQQSFPALSFPPLPECGDFDLHEVLVSPYFFN 990


>ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Elaeis guineensis]
          Length = 1038

 Score = 1102 bits (2849), Expect = 0.0
 Identities = 528/650 (81%), Positives = 587/650 (90%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VGSRLIELL+++AYIQPP+ Q ADGPPDIRPAF+H+LRTV K+ QK SRRYG+IECDPLV
Sbjct: 392  VGSRLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKHSRRYGVIECDPLV 451

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            RQG++RTARHMVIPYMPML+PP  W GYDKG +LFLPSY+MR HGA+QQREAVK+ P+ Q
Sbjct: 452  RQGLDRTARHMVIPYMPMLVPPVHWTGYDKGGHLFLPSYIMRIHGARQQREAVKRAPRMQ 511

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            +  VFEALDTLG  KWR+NKR+L VVDR+W+ GG+ A LV+RDD+PLPE+P TEDEA +R
Sbjct: 512  MQAVFEALDTLGTTKWRINKRVLSVVDRMWSGGGRLADLVDRDDIPLPEKPDTEDEATIR 571

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       ENSERHS RCD+ELKLAVARKMK E+GFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 572  KWKWKVKSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 631

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSY+GR+AFTE++LD IFD
Sbjct: 632  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYDGRVAFTENHLDEIFD 690

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLAVC+NLSEALRSSSPETTISH+PVHQDGSCNGLQHYAA
Sbjct: 691  SADRPLEGRRWWLGAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAA 750

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGA AVNLVAG+KPADVYS IA RV EIM+ DAQKDPA D N LRA+LL+  N V
Sbjct: 751  LGRDKLGAIAVNLVAGDKPADVYSEIAARVLEIMRRDAQKDPAIDPNALRARLLV--NQV 808

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTY+GAR+QIK+RLKER    ++ E FG +CYAAK TLTALGEMF
Sbjct: 809  DRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVISDDTELFGASCYAAKTTLTALGEMF 868

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            +AARSIM WLGDCAK+IA +NHPVRWTTPLGLPVVQPYR LGRHLIKTSLQVLTLQRETD
Sbjct: 869  QAARSIMGWLGDCAKIIASENHPVRWTTPLGLPVVQPYRALGRHLIKTSLQVLTLQRETD 928

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTHACDVD++NRILR
Sbjct: 929  KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKIAGLNFAGVHDSYWTHACDVDQLNRILR 988

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELYE PILE+LL SFQ SFPTL FPPLPERGDFNLK+VL+SPYFFN
Sbjct: 989  EKFVELYETPILEDLLESFQHSFPTLRFPPLPERGDFNLKDVLDSPYFFN 1038


>ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Phoenix dactylifera]
          Length = 1038

 Score = 1100 bits (2845), Expect = 0.0
 Identities = 526/650 (80%), Positives = 591/650 (90%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VGSRLIELL+++AYIQPP+ Q ADGPPDIRPAF+H+LRTV K+ QK SRRYG+IECDPLV
Sbjct: 392  VGSRLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKHSRRYGVIECDPLV 451

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            RQG++RTARHMVIPYMPML+PP  W GY+KG +LFLPSY+MRTHGA+QQREAV++ P+K+
Sbjct: 452  RQGLDRTARHMVIPYMPMLVPPVNWTGYEKGGHLFLPSYIMRTHGARQQREAVRRAPRKE 511

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            +  VFEALDTLG  KWRVNKR+L VVDR+W+SGG+ A LV+RDD+PLPE+P TED AE+R
Sbjct: 512  MQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLVDRDDIPLPEKPDTEDGAEIR 571

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       ENSE+HS RCD+ELKLAVARKMK E+GFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 572  KWKWKVKSVKKENSEKHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 631

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSY+GR+AFTE++LD+IFD
Sbjct: 632  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYDGRVAFTENHLDDIFD 690

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLAVC+NLSEALRSSSPETTISH+PVHQDGSCNGLQHYAA
Sbjct: 691  SADRPLEGRRWWLGAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAA 750

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGA AVNLVAG+KPADVYS IA RV EIM+ DAQKDPA D + LRA+LL+  N V
Sbjct: 751  LGRDKLGAIAVNLVAGDKPADVYSEIAARVLEIMRRDAQKDPATDPDALRARLLV--NQV 808

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTY+GAR+QIK+RLKER    ++ E F  +CYAAK TLTALGEMF
Sbjct: 809  DRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVISDDTELFSASCYAAKTTLTALGEMF 868

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            +AARSIMSWLGDCAK+IA +N PVRWTTPLGLPVVQPYR LGRHLIKTSLQVLTLQRETD
Sbjct: 869  QAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRALGRHLIKTSLQVLTLQRETD 928

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACKRAGLNFAGVHDSYWTHACDVD+MN ILR
Sbjct: 929  KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDQMNWILR 988

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELYE PILENLL SFQ+SFPTL FPPLPERGD++LK+VL+SPYFFN
Sbjct: 989  EKFVELYETPILENLLESFQQSFPTLSFPPLPERGDYSLKDVLDSPYFFN 1038


>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|590698457|ref|XP_007045722.1| DNA-directed RNA
            polymerase isoform 1 [Theobroma cacao]
            gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
            DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 996

 Score = 1100 bits (2845), Expect = 0.0
 Identities = 525/650 (80%), Positives = 593/650 (91%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VG RLI+LL+++AYIQPP+DQL D PPDIRPAF H+L+T+ KDG K SRRYG+IECD LV
Sbjct: 350  VGCRLIQLLIENAYIQPPVDQLGDCPPDIRPAFVHSLKTITKDGNKGSRRYGVIECDLLV 409

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+G+E+TARHMVIPYMPML+PP  W GYD+GAYLFLPSYVMRTHGAKQQRE VK+TP+KQ
Sbjct: 410  RKGLEKTARHMVIPYMPMLVPPQNWTGYDRGAYLFLPSYVMRTHGAKQQRETVKRTPRKQ 469

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + P+FEALDTLG+ KWR+NKR+LGVVDR+WA+GG+ A LV+R+DVPLPE+P TEDEAE++
Sbjct: 470  LEPIFEALDTLGNTKWRINKRVLGVVDRLWANGGRVASLVDREDVPLPEKPDTEDEAEIQ 529

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       +N+ERHS RCD+ELKLAVARKM+ EDGFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 530  KWKWKVKAANKQNNERHSLRCDVELKLAVARKMRDEDGFYYPHNLDFRGRAYPMHPYLNH 589

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSYEGRIAFTE++LD+IFD
Sbjct: 590  LGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYEGRIAFTENHLDDIFD 648

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLA C+NLSEALRSSSPETTISH+PVHQDGSCNGLQHYAA
Sbjct: 649  SADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAA 708

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAA+VNLVAGEKPADVYSGIA RV +IM+ DA+KDPA + + L A+LLI  N V
Sbjct: 709  LGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKDPAINPHALHARLLI--NQV 766

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTYIGARDQIK+RLKER    ++ E F  +CYAA+ TLTALGEMF
Sbjct: 767  DRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMFVASCYAARTTLTALGEMF 826

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            +AARSIM+WLG+CAKVI+ +N PVRW TPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD
Sbjct: 827  QAARSIMNWLGECAKVISSENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 886

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVM KRQ+TAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHACDVDEMNRILR
Sbjct: 887  KVMAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILR 946

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELYE PILENLL SFQ+SFP+L FPPLPERGDF+L+EVLESPYFFN
Sbjct: 947  EKFVELYEAPILENLLESFQKSFPSLNFPPLPERGDFDLREVLESPYFFN 996


>ref|XP_012438460.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial isoform X1
            [Gossypium raimondii] gi|763783438|gb|KJB50509.1|
            hypothetical protein B456_008G174700 [Gossypium
            raimondii]
          Length = 996

 Score = 1098 bits (2841), Expect = 0.0
 Identities = 524/650 (80%), Positives = 588/650 (90%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VG RLI+LL+++AYIQPP+DQ+ DGPPDIRPAF H L+ V KDG K SRRYG+IECDPLV
Sbjct: 350  VGCRLIQLLMENAYIQPPVDQIGDGPPDIRPAFVHALKNVIKDGNKGSRRYGVIECDPLV 409

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+G+E+TA+HMVIPYMPML+PP  W GYD+GAYLFLPSYVMRTHGAKQQRE VK+TP+KQ
Sbjct: 410  RKGLEKTAKHMVIPYMPMLVPPQNWTGYDQGAYLFLPSYVMRTHGAKQQRETVKRTPRKQ 469

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + PVFEALDTLG+ KWR+N+R+LGVVDR+WA+GG+ A LV+R+DVPLPEEP TEDE E+R
Sbjct: 470  LEPVFEALDTLGNTKWRINRRILGVVDRLWANGGRLADLVDREDVPLPEEPDTEDETEIR 529

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       EN+ERHS RCD+ELKLAVARKMK E GFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 530  KWKWKVKAVKKENNERHSQRCDVELKLAVARKMKDEVGFYYPHNLDFRGRAYPMHPYLNH 589

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSYEGR+ FTES+LD+IFD
Sbjct: 590  LGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYEGRVEFTESHLDDIFD 648

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLA C+NLSEALRSS PE TISH+PVHQDGSCNGLQHYAA
Sbjct: 649  SADRPLEGKRWWLSAEDPFQCLAACINLSEALRSSIPEATISHMPVHQDGSCNGLQHYAA 708

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAAAVNLVAG+KPADVYSGIA RV +IM+ DAQ+DPA + N L A+LLI  N V
Sbjct: 709  LGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAQEDPATNPNALHARLLI--NQV 766

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTY+GARDQIK+RLKER    ++ + F  +CYAA+ TLTALGEMF
Sbjct: 767  DRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGAIADDTQLFVASCYAARTTLTALGEMF 826

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            +AARSIM WLG+CAKVIA +N PVRW TPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD
Sbjct: 827  QAARSIMGWLGECAKVIASENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 886

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHACDVDEMNRILR
Sbjct: 887  KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILR 946

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELYE PILENLL SFQ++FP+L FPPLPERGDF+L+EVLESPYFFN
Sbjct: 947  EKFVELYEAPILENLLESFQKAFPSLNFPPLPERGDFDLREVLESPYFFN 996


>ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Phoenix
            dactylifera]
          Length = 1036

 Score = 1098 bits (2839), Expect = 0.0
 Identities = 526/650 (80%), Positives = 595/650 (91%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VGSRLIELLV++AYIQPP++QLAD PPDIRPAF+H LR V+ + +KISRRYG IECDPLV
Sbjct: 390  VGSRLIELLVETAYIQPPVNQLADSPPDIRPAFRHLLRNVQNEQKKISRRYGFIECDPLV 449

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            RQG++RTARHMVIPYMPML+PP  W GYDKGA+LFLPSY+MRTHG++QQREAVK+ P+KQ
Sbjct: 450  RQGLDRTARHMVIPYMPMLVPPISWKGYDKGAHLFLPSYLMRTHGSRQQREAVKRAPRKQ 509

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            +  VFEALDTLG+ KWRVNKR+L +VDR+W+SGG+ A LV+RDD+PLPE+P TED AE+R
Sbjct: 510  LQLVFEALDTLGNTKWRVNKRVLSIVDRMWSSGGRLANLVDRDDIPLPEKPETEDGAEIR 569

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       ENSERHS RCD+E+KLAVARKMK E+GFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 570  KWKWKLKSVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 629

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSY+GRIAFTE++LD+IFD
Sbjct: 630  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYDGRIAFTENHLDDIFD 688

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLAVC+NL+EALRSSSPE+TISHIPVHQDGSCNGLQHYAA
Sbjct: 689  SADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQDGSCNGLQHYAA 748

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGA +VNLVAGEKPADVYSGIA RVREIMQ+DA+KDPA + N L A+LLI++  V
Sbjct: 749  LGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAEKDPATEPNALHARLLIDQ--V 806

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTY+GAR+QIK+RLKER    ++ E F  +CYAAK TLTALGEMF
Sbjct: 807  DRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLELFRASCYAAKTTLTALGEMF 866

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            +AARSIMSWLGDCAKVIA +NH VRWTTPLGLPVVQPYR+LGRH+IKTSLQVL+LQRETD
Sbjct: 867  QAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQPYRKLGRHIIKTSLQVLSLQRETD 926

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            K+MVKRQ+TAFPPNFVHSLDGSHMMM+A+ACKRAGLNFAGVHDSYWTHACDVDEMNRILR
Sbjct: 927  KIMVKRQRTAFPPNFVHSLDGSHMMMSAVACKRAGLNFAGVHDSYWTHACDVDEMNRILR 986

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELYE PILENLL SFQ+SFP+L F PLPERGDF+LK+VLES YFFN
Sbjct: 987  EKFVELYEIPILENLLESFQQSFPSLSFRPLPERGDFDLKDVLESTYFFN 1036


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|731418092|ref|XP_010660553.1|
            PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|298204431|emb|CBI16911.3| unnamed protein product
            [Vitis vinifera]
          Length = 1035

 Score = 1092 bits (2824), Expect = 0.0
 Identities = 526/651 (80%), Positives = 589/651 (90%), Gaps = 1/651 (0%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPID-QLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPL 179
            VGSRLIELL+Q+AYIQPP+D QLAD PPDIRPAF HT +TV ++ +KI RR+G+IECDPL
Sbjct: 388  VGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIGRRFGVIECDPL 447

Query: 180  VRQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQK 359
            V++G+ERTARHMVIPY+PML+PP KW GYDKGA+LFLPSYVMRTHGA+QQREAVK+ P+ 
Sbjct: 448  VKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPRN 507

Query: 360  QIGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAEL 539
            Q+ PVFEAL+TLG+ KWR+NKRL  VVDR+WA GG  A LV+R+DVPLPE+P TEDEA+L
Sbjct: 508  QLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQL 567

Query: 540  RNWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLN 719
            R W+W        NSERHS RCD+ELKLAVARKMK EDGF+YPHNLDFRGRAYPMHPYLN
Sbjct: 568  RKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLN 627

Query: 720  HLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIF 899
            HLGSDLCRGILEFAEGRPLG SGL WLKIHLANLF AGGVDKLS+EGRI FTE++LD+IF
Sbjct: 628  HLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLF-AGGVDKLSHEGRITFTENHLDDIF 686

Query: 900  DSADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYA 1079
            DSADRPLEG +WWL AEDPFQ LA C+NLSEALRSSSPETTISHIPVHQDGSCNGLQHYA
Sbjct: 687  DSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYA 746

Query: 1080 ALGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNW 1259
            ALGRD+LGA AVNLVAGEKPADVYSGIA RV +IM+ DA+KDPA   + LRA++LI  N 
Sbjct: 747  ALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILI--NQ 804

Query: 1260 VNRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEM 1439
            V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKER+   ++ E FG ACYAAK+TLTALGEM
Sbjct: 805  VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITLTALGEM 864

Query: 1440 FEAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRET 1619
            F+AARSIMSWLGDCAK+IA +N PVRWTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRET
Sbjct: 865  FQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRET 924

Query: 1620 DKVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRIL 1799
            + +MVKRQ+TAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHACDVDEMNR+L
Sbjct: 925  ETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRLL 984

Query: 1800 REKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            REKFV+LYE PILENLL SFQ+SFP LEFPPLPERGDF+L+EVLESPYFFN
Sbjct: 985  REKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035


>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
            gi|462422319|gb|EMJ26582.1| hypothetical protein
            PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score = 1090 bits (2818), Expect = 0.0
 Identities = 518/650 (79%), Positives = 583/650 (89%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VG RLI+LL+ +AYIQPP+DQ+ DGPPDIRPAF H L+T+ +D QK SRRYG+IECDP+V
Sbjct: 360  VGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRYGVIECDPIV 419

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+GME+TARHMV+PYMPML+PP  W GYD+GAYLFLPSYVMRTHGAKQQRE VK+TP+KQ
Sbjct: 420  RKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRTPRKQ 479

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + PVFEALDTLG  KWRVNKR+LGV+DR+WASGG+ A LV+R+DVPLPEEP TEDEAE+R
Sbjct: 480  LEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIR 539

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       ENSERHS RCD+ELKLA +RKMK E+GFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 540  KWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 599

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSD+CRGILEF+EGR LGKSGLRWLKIHLANL+ AGGVDKLS++ R AFTE+++D IFD
Sbjct: 600  LGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLY-AGGVDKLSFDDRAAFTENHVDEIFD 658

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLA C+NL EALRS SPETTIS++PVHQDGSCNGLQHYAA
Sbjct: 659  SADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQHYAA 718

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAAAVNLV G+KPADVYSGIA RV +IM+ DA+KDPA + N L A+LLI  N V
Sbjct: 719  LGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLI--NQV 776

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTY+GARDQIK+RLKER    ++   F  ACYAA+ TLTALGEMF
Sbjct: 777  DRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTLTALGEMF 836

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            EAARSIMSWLG+CAKVIA +N PVRW TPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD
Sbjct: 837  EAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 896

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHACD+DEMNRILR
Sbjct: 897  KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNRILR 956

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELYE PILENLL  FQ+SFPTL FPPLP+RGDF+L++VLESPYFFN
Sbjct: 957  EKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006


>emb|CDP00493.1| unnamed protein product [Coffea canephora]
          Length = 808

 Score = 1088 bits (2814), Expect = 0.0
 Identities = 520/650 (80%), Positives = 589/650 (90%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VG RLI++++++AYIQPP+DQ  DGPPDIRPAF HTL+TV+   Q+ SRRYG+IECDPLV
Sbjct: 164  VGCRLIQIMMETAYIQPPVDQFEDGPPDIRPAFVHTLKTVET--QRGSRRYGVIECDPLV 221

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+G+ERTA+HMVIPYMPML+PP  W GYD+GAYLFLPSY+MRTHGAKQQREA+++ P++Q
Sbjct: 222  RKGLERTAKHMVIPYMPMLVPPLNWTGYDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQ 281

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + PVF+ALDTLG  KWRVNKR+LGV+DR+WASGG+ A LV+RDD+PLPEEP TEDE E+R
Sbjct: 282  LEPVFQALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEREIR 341

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       ENSERHS RCD+ELKLAVARKMK E+GF+YPHNLDFRGRAYPMHP+LNH
Sbjct: 342  KWKWKVNNVKKENSERHSQRCDIELKLAVARKMKDEEGFFYPHNLDFRGRAYPMHPHLNH 401

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLG SGL WLKIHLAN++  GGVDKLS+EGR AF E++L++IFD
Sbjct: 402  LGSDLCRGILEFAEGRPLGNSGLNWLKIHLANVYG-GGVDKLSHEGRAAFAENHLEDIFD 460

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AED FQCLA CMNLSEALRS SPETT+SH+P+HQDGSCNGLQHYAA
Sbjct: 461  SADRPLEGRRWWLNAEDSFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAA 520

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAAAVNLVAGEKPADVYSGIA RV +IMQ DA +DPA+D NVLRA+LLI  N V
Sbjct: 521  LGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAARDPASDPNVLRARLLI--NQV 578

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTYIGARDQIK+RLKER    EEAE F  ACYAAK TLTALGEMF
Sbjct: 579  DRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEEEAELFSAACYAAKTTLTALGEMF 638

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            EAARSIMSWLGDCAKVIA++N PVRWTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETD
Sbjct: 639  EAARSIMSWLGDCAKVIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETD 698

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC+ AGLNFAGVHDSYWTHACDVD+MN+ILR
Sbjct: 699  KVMVKRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILR 758

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            +KFVELYE PILE+LL +FQ+SFP L+FPPLPERGDF+L+EVLESPYFFN
Sbjct: 759  QKFVELYEAPILEDLLDNFQKSFPKLKFPPLPERGDFDLREVLESPYFFN 808


>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
            X2 [Oryza brachyantha]
          Length = 839

 Score = 1087 bits (2812), Expect = 0.0
 Identities = 519/650 (79%), Positives = 589/650 (90%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VGSRLIEL++++AYIQPP  Q ADGPPDIRPAF H +RTV K+ QK SRRYG+I+CDPLV
Sbjct: 193  VGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAKEQQKSSRRYGVIKCDPLV 252

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            RQG++RTA+HMVIPYMPMLIPP  W GYDKGA+LFLPSYVMRTHGA+QQREAVK+ P++Q
Sbjct: 253  RQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQ 312

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            +  VFEALDTLG  KWRVNKR+L +VDR+W+SGG+ A LV+R DV LPE+P TEDEA+L+
Sbjct: 313  MQSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVALPEKPDTEDEAKLK 372

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             WRW       ENSERHS RCD+ELKLAVARKMK E+GFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 373  KWRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 432

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANL+ AGGVDKLSY+GRIAFTE++L++IFD
Sbjct: 433  LGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLY-AGGVDKLSYDGRIAFTENHLEDIFD 491

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLAVC+NL+EALRS SPET ISHIPVHQDGSCNGLQHYAA
Sbjct: 492  SADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAA 551

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGA AVNLVAGEKPADVY+GIA RV EIM+ DA KDPA D +  RA++L+++  V
Sbjct: 552  LGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPDAARARMLVDQ--V 609

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTY+GAR+QIK+RLKERD  G+++E F  +CYAAKVTLTALGEMF
Sbjct: 610  DRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSASCYAAKVTLTALGEMF 669

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            +AARSIM+WLGDCAK+IA +N PV+WTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETD
Sbjct: 670  QAARSIMNWLGDCAKIIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETD 729

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACKR GLNFAGVHDSYWTHACDVD MN+ILR
Sbjct: 730  KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILR 789

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELY+ PILENLL SF++SFP L+FPPLPERGDF+LK+VL SPYFFN
Sbjct: 790  EKFVELYDTPILENLLGSFEKSFPELKFPPLPERGDFDLKDVLGSPYFFN 839


>ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Elaeis
            guineensis]
          Length = 1036

 Score = 1087 bits (2811), Expect = 0.0
 Identities = 525/650 (80%), Positives = 588/650 (90%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VGSRLIELLV++AYIQPPI+QLAD PPDIRPAF+H LR V+K+ +KISRRYG IECDPLV
Sbjct: 390  VGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRNVQKEQKKISRRYGFIECDPLV 449

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            RQG++RTARHMVIPYMPML+PP  W  YDKGA+LFLPSYVMRTHG++QQR AVK+ P++Q
Sbjct: 450  RQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFLPSYVMRTHGSRQQRAAVKRAPREQ 509

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            +  VFEALDTLG+ KWRVNKR+L +VDR+W+SGG+ A LV+RDD PLPE+P TED AE+R
Sbjct: 510  MQLVFEALDTLGNTKWRVNKRVLNIVDRIWSSGGRLANLVDRDDNPLPEKPETEDGAEIR 569

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       ENSERHS RCD+E+KLAVARKMK E+GFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 570  KWKWKLKAVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 629

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLGKSGL WLKIHLANL+ AGGVDKLSY+GRIAFTE++LD+IFD
Sbjct: 630  LGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLY-AGGVDKLSYDGRIAFTENHLDDIFD 688

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLAVC+NL+EALRSSSPE+TISHIPVHQDGSCNGLQHYAA
Sbjct: 689  SADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQDGSCNGLQHYAA 748

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGA +VNLVAGEKPADVYSGIA RVREIMQ+DAQKDPA D N   A+LLI  N V
Sbjct: 749  LGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAQKDPAMDPNASHARLLI--NQV 806

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTY+GAR+QIK+RLKER    ++ E F  +CYAAK TLTALGEMF
Sbjct: 807  DRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLESFRASCYAAKTTLTALGEMF 866

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            +AARSIM WLGDCAKVIA +N  VRWTTPLGLPVVQPYR+LGRH+IKTSLQVL+LQRETD
Sbjct: 867  QAARSIMCWLGDCAKVIASENQAVRWTTPLGLPVVQPYRKLGRHIIKTSLQVLSLQRETD 926

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            K+MVKRQ+TAFPPNFVHSLDGSHMMMTA+ACKRAGLNFAGVHDSYWTHACDVDEMNRILR
Sbjct: 927  KIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILR 986

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            +KFVELYE PILENL  SFQ+SFP+L FPPLPERGDF+LK+VLES YFFN
Sbjct: 987  DKFVELYEIPILENLRESFQQSFPSLGFPPLPERGDFDLKDVLESTYFFN 1036


>ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Prunus mume]
          Length = 1006

 Score = 1087 bits (2811), Expect = 0.0
 Identities = 518/650 (79%), Positives = 582/650 (89%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VG RLI+LL+ +AYIQPP+DQ+ DGPPDIRPAF H L+T+ KD QK SRRYG+IECDPLV
Sbjct: 360  VGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITKDTQKTSRRYGVIECDPLV 419

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+GM++TARHMV+PYMPML+PP  W GYD+GAYLFLPSYVMRTHGAKQQRE VK+TP+KQ
Sbjct: 420  RKGMDKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRTPRKQ 479

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + PVFEALDTLG  KWRVNKR+LGV+DR+WASGG+ A LV+R+DVPLPEEP TEDEAE+R
Sbjct: 480  LEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIR 539

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       ENSERHS RCD+ELKLA +RKMK E+GFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 540  KWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 599

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSD+CRGILEF+EGR LGKSGLRWLKIHLANL+ AGGVDKLS++ R AFTE+++D IFD
Sbjct: 600  LGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLY-AGGVDKLSFDDRAAFTENHVDEIFD 658

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLA C+NL EALRS SPETTIS++PVHQDGSCNGLQHYAA
Sbjct: 659  SADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQHYAA 718

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAAAVNLV G+KPADVYSGIA RV +IM+ DA+KDPA + N L A+LLI  N V
Sbjct: 719  LGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLI--NQV 776

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTY+GAR+QIK+RLKER    ++   F  ACYAA+ TLTALGEMF
Sbjct: 777  DRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGSIADDTALFVAACYAARTTLTALGEMF 836

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            EAARSIMSWLG+CAKVIA +N PVRW TPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD
Sbjct: 837  EAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 896

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHACD+DEMNRILR
Sbjct: 897  KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNRILR 956

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELYE PILENLL  FQ SFPTL FPPLP+RGDF+L++VLESPYFFN
Sbjct: 957  EKFVELYEAPILENLLEGFQRSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006


>ref|XP_009627611.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Nicotiana
            tomentosiformis]
          Length = 1002

 Score = 1087 bits (2810), Expect = 0.0
 Identities = 517/650 (79%), Positives = 590/650 (90%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VG RLI++L+++AYIQPP DQL DGPPDIRPAF HTL+TV+    K SRRYG+I+CDPLV
Sbjct: 358  VGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVET--MKGSRRYGVIQCDPLV 415

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+G+++TARHMVIPYMPML+PP  W+GYDKG YLFLPSY+MRTHGAKQQREAVK+ P+KQ
Sbjct: 416  RKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQ 475

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + PVF+ALDTLG+ KWRVN+++LG+VDR+WASGG+ A LV+R+DVPLPE P TEDEAE+R
Sbjct: 476  LEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAEIR 535

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       EN ERHS RCD+ELKLAVARKMK EDGFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 536  KWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 595

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLG SGLRWLKIHLAN++  GGVDKLSYEGR+AF+E++L++IFD
Sbjct: 596  LGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYG-GGVDKLSYEGRVAFSENHLEDIFD 654

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SA+RPLEG +WWL AEDPFQCLA C+N++EALRS SPET IS++P+HQDGSCNGLQHYAA
Sbjct: 655  SAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAA 714

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAAAVNLVAG+KPADVYSGIA RV +IM+ DA KDPA D NV+RA+LLI  N V
Sbjct: 715  LGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLI--NQV 772

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTYIGARDQIKKRLKER    ++ E F  ACYAAK TLTALGEMF
Sbjct: 773  DRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMF 832

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            EAARSIMSWLGDCAK+IA++NHPVRWTTPLGLPVVQPYR+LGRHLIKTSLQ+LTLQRETD
Sbjct: 833  EAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETD 892

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHACDVD+MN+ILR
Sbjct: 893  KVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILR 952

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELY+ PILENLL SFQ+SFP L+FPPLPERGDF+L+EVLESPYFFN
Sbjct: 953  EKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
            [Nicotiana tabacum]
          Length = 1002

 Score = 1087 bits (2810), Expect = 0.0
 Identities = 517/650 (79%), Positives = 590/650 (90%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VG RLI++L+++AYIQPP DQL DGPPDIRPAF HTL+TV+    K SRRYG+I+CDPLV
Sbjct: 358  VGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVET--MKGSRRYGVIQCDPLV 415

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+G+++TARHMVIPYMPML+PP  W+GYDKG YLFLPSY+MRTHGAKQQREAVK+ P+KQ
Sbjct: 416  RKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQ 475

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + PVF+ALDTLG+ KWRVN+++LG+VDR+WASGG+ A LV+R+DVPLPE P TEDEAE+R
Sbjct: 476  LEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAEIR 535

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       EN ERHS RCD+ELKLAVARKMK EDGFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 536  KWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 595

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLG SGLRWLKIHLAN++  GGVDKLSYEGR+AF+E++L++IFD
Sbjct: 596  LGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYG-GGVDKLSYEGRVAFSENHLEDIFD 654

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SA+RPLEG +WWL AEDPFQCLA C+N++EALRS SPET IS++P+HQDGSCNGLQHYAA
Sbjct: 655  SAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAA 714

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAAAVNLVAG+KPADVYSGIA RV +IM+ DA KDPA D NV+RA+LLI  N V
Sbjct: 715  LGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLI--NQV 772

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTYIGARDQIKKRLKER    ++ E F  ACYAAK TLTALGEMF
Sbjct: 773  DRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMF 832

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            EAARSIMSWLGDCAK+IA++NHPVRWTTPLGLPVVQPYR+LGRHLIKTSLQ+LTLQRETD
Sbjct: 833  EAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETD 892

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHACDVD+MN+ILR
Sbjct: 893  KVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILR 952

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELY+ PILENLL SFQ+SFP L+FPPLPERGDF+L+EVLESPYFFN
Sbjct: 953  EKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
          Length = 715

 Score = 1087 bits (2810), Expect = 0.0
 Identities = 517/650 (79%), Positives = 590/650 (90%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VG RLI++L+++AYIQPP DQL DGPPDIRPAF HTL+TV+    K SRRYG+I+CDPLV
Sbjct: 71   VGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVET--MKGSRRYGVIQCDPLV 128

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+G+++TARHMVIPYMPML+PP  W+GYDKG YLFLPSY+MRTHGAKQQREAVK+ P+KQ
Sbjct: 129  RKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQ 188

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + PVF+ALDTLG+ KWRVN+++LG+VDR+WASGG+ A LV+R+DVPLPE P TEDEAE+R
Sbjct: 189  LEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAEIR 248

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       EN ERHS RCD+ELKLAVARKMK EDGFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 249  KWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 308

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLG SGLRWLKIHLAN++  GGVDKLSYEGR+AF+E++L++IFD
Sbjct: 309  LGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYG-GGVDKLSYEGRVAFSENHLEDIFD 367

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SA+RPLEG +WWL AEDPFQCLA C+N++EALRS SPET IS++P+HQDGSCNGLQHYAA
Sbjct: 368  SAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAA 427

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAAAVNLVAG+KPADVYSGIA RV +IM+ DA KDPA D NV+RA+LLI  N V
Sbjct: 428  LGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLI--NQV 485

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTYIGARDQIKKRLKER    ++ E F  ACYAAK TLTALGEMF
Sbjct: 486  DRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMF 545

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            EAARSIMSWLGDCAK+IA++NHPVRWTTPLGLPVVQPYR+LGRHLIKTSLQ+LTLQRETD
Sbjct: 546  EAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETD 605

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHACDVD+MN+ILR
Sbjct: 606  KVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILR 665

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELY+ PILENLL SFQ+SFP L+FPPLPERGDF+L+EVLESPYFFN
Sbjct: 666  EKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 715


>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score = 1085 bits (2805), Expect = 0.0
 Identities = 521/650 (80%), Positives = 588/650 (90%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VGSRLIEL + +A+IQPP  Q +DG PDIRPAF+H +RTV K+ QK SRRYG+I+CDPLV
Sbjct: 330  VGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRTVAKEQQKSSRRYGVIKCDPLV 389

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            RQG++RTA+HMVIPYMPMLIPP  W GYDKGA+LFLPSYVMRTHGA+QQREAVK+ P++Q
Sbjct: 390  RQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQ 449

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            +  VFEAL+TLG  KWRVNKR+L +VDR+W+SGG+ A LV+R DVPLPE+P TEDE  ++
Sbjct: 450  MQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVPLPEKPDTEDETLIK 509

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
            NW+W       ENSERHS RCD+ELKLAVARKMK E+GFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 510  NWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 569

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLGKSGL WLKIHLANL+ AGGVDKLSY+GR+AFTE++L+ IFD
Sbjct: 570  LGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLY-AGGVDKLSYDGRVAFTENHLEEIFD 628

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SADRPLEG +WWL AEDPFQCLAVCMNL+EALRSSSPETTISHIPVHQDGSCNGLQHYAA
Sbjct: 629  SADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAA 688

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGA AVNLVAGEKPADVY+GIA RV EIM+ DAQKDP+ D +V RA+L++++  V
Sbjct: 689  LGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQKDPSIDPDVARARLIVDQ--V 746

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTY+GARDQIK+RLKER    +EAE FG +CYAAKVTLTALGEMF
Sbjct: 747  DRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELFGASCYAAKVTLTALGEMF 806

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            +AAR IM+WLGDCAKVIA +N PVRWTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETD
Sbjct: 807  QAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETD 866

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACKR GLNFAGVHDSYWTHACDVD MN+ILR
Sbjct: 867  KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILR 926

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELY+ PILENLL SF++SFP L+FPPLPERGDF++KEVLESPYFFN
Sbjct: 927  EKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVLESPYFFN 976


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score = 1085 bits (2805), Expect = 0.0
 Identities = 516/650 (79%), Positives = 590/650 (90%)
 Frame = +3

Query: 3    VGSRLIELLVQSAYIQPPIDQLADGPPDIRPAFKHTLRTVKKDGQKISRRYGMIECDPLV 182
            VG RLI++L+++AYIQPP DQL DGPPDIRPAF HTL+TV+    K SRRYG+I+CDPLV
Sbjct: 358  VGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVET--MKGSRRYGVIQCDPLV 415

Query: 183  RQGMERTARHMVIPYMPMLIPPAKWIGYDKGAYLFLPSYVMRTHGAKQQREAVKQTPQKQ 362
            R+G+++TARHMVIPYMPML+PP  W+GYDKG YLFLPSY+MRTHGAKQQREAVK+ P+KQ
Sbjct: 416  RKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQ 475

Query: 363  IGPVFEALDTLGDIKWRVNKRLLGVVDRVWASGGKDAGLVERDDVPLPEEPATEDEAELR 542
            + PVF+ALDTLG+ KWRVN+++LG+V+R+WASGG+ A LV+R+DVPLPE P TEDEAE+R
Sbjct: 476  LEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDVPLPEAPDTEDEAEIR 535

Query: 543  NWRWXXXXXXXENSERHSHRCDLELKLAVARKMKAEDGFYYPHNLDFRGRAYPMHPYLNH 722
             W+W       EN ERHS RCD+ELKLAVARKMK EDGFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 536  KWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 595

Query: 723  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAAGGVDKLSYEGRIAFTESNLDNIFD 902
            LGSDLCRGILEFAEGRPLG SGLRWLKIHLAN++  GGVDKLSYEGR+AF+E++L++IFD
Sbjct: 596  LGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYG-GGVDKLSYEGRVAFSENHLEDIFD 654

Query: 903  SADRPLEGNKWWLKAEDPFQCLAVCMNLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 1082
            SA+RPLEG +WWL AEDPFQCLA C+N++EALRS SPET IS++P+HQDGSCNGLQHYAA
Sbjct: 655  SAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAA 714

Query: 1083 LGRDELGAAAVNLVAGEKPADVYSGIADRVREIMQEDAQKDPAADSNVLRAKLLIERNWV 1262
            LGRD+LGAAAVNLVAG+KPADVYSGIA RV +IM+ DA KDPA D NV+RA+LLI  N V
Sbjct: 715  LGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLI--NQV 772

Query: 1263 NRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDPSGEEAEQFGLACYAAKVTLTALGEMF 1442
            +RKLVKQTVMTSVYGVTYIGARDQIKKRLKER    ++ E F  ACYAAK TLTALGEMF
Sbjct: 773  DRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMF 832

Query: 1443 EAARSIMSWLGDCAKVIALKNHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 1622
            EAARSIMSWLGDCAK+IA++NHPVRWTTPLGLPVVQPYR+LGRHLIKTSLQ+LTLQRETD
Sbjct: 833  EAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETD 892

Query: 1623 KVMVKRQKTAFPPNFVHSLDGSHMMMTALACKRAGLNFAGVHDSYWTHACDVDEMNRILR 1802
            KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHACDVD+MN+ILR
Sbjct: 893  KVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILR 952

Query: 1803 EKFVELYEQPILENLLASFQESFPTLEFPPLPERGDFNLKEVLESPYFFN 1952
            EKFVELY+ PILENLL SFQ+SFP L+FPPLPERGDF+L+EVLESPYFFN
Sbjct: 953  EKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002