BLASTX nr result

ID: Papaver30_contig00039956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00039956
         (476 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010255160.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08
emb|CAN69936.1| hypothetical protein VITISV_038780 [Vitis vinifera]    57   5e-06

>ref|XP_010255160.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
           chloroplastic isoform X1 [Nelumbo nucifera]
          Length = 1161

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 39/99 (39%), Positives = 56/99 (56%)
 Frame = -2

Query: 409 QVPSYTAFLRESVRERLHTFYEESQSEMKSMPSLKEFKAIFPRISKAHINNASSLLEPTT 230
           QV +Y  F R S RE +HTFYEE+QS ++S+ +    K + P IS    +N SSLL  T 
Sbjct: 336 QVSTYNGFFRPSFREEIHTFYEENQSGVRSISNFSSLKTVPPHISLNSNSNFSSLLR-TN 394

Query: 229 TLSREELTLNGSHEKTGFLRGEVPISSTKGRGPSRKRKN 113
            LS  E++  G H  T +   ++P+S  K  G   +RK+
Sbjct: 395 MLSGAEVS-EGLHNTTDYHERKMPLSCYK-EGSCHRRKD 431


>emb|CAN69936.1| hypothetical protein VITISV_038780 [Vitis vinifera]
          Length = 1206

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 32/99 (32%), Positives = 50/99 (50%)
 Frame = -2

Query: 409 QVPSYTAFLRESVRERLHTFYEESQSEMKSMPSLKEFKAIFPRISKAHINNASSLLEPTT 230
           ++ S+T   R+++RE L+TFYE  QS MK MP+    K +    S    N  S  +   T
Sbjct: 288 EIISFTGIFRDTIREELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNAT 347

Query: 229 TLSREELTLNGSHEKTGFLRGEVPISSTKGRGPSRKRKN 113
           +    EL+   SH    ++ G++ +S  K  G S KR +
Sbjct: 348 S-KEAELSAQNSHSSADYVEGKMSLSCYK-EGSSGKRNB 384


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