BLASTX nr result
ID: Papaver30_contig00039750
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00039750
(2420 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 100 1e-55
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 100 1e-55
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 98 2e-53
ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isof... 107 6e-51
gb|ABA95357.2| retrotransposon protein, putative, unclassified [... 88 2e-50
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 89 2e-50
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e... 92 4e-50
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 90 8e-50
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ... 105 1e-49
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group] 81 2e-49
ref|XP_008655231.1| PREDICTED: uncharacterized protein LOC100382... 95 4e-49
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 87 2e-48
gb|ABA97403.1| retrotransposon protein, putative, unclassified [... 97 4e-48
gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyp... 85 8e-47
gb|ABF94845.1| retrotransposon protein, putative, unclassified [... 82 4e-46
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 92 7e-46
emb|CAE04934.2| OSJNBa0017P10.11 [Oryza sativa Japonica Group] 85 3e-45
gb|AAP52367.1| retrotransposon protein, putative, unclassified [... 77 2e-43
gb|AAM01152.2|AC113336_4 Putative retroelement [Oryza sativa Jap... 77 3e-43
dbj|BAG90661.1| unnamed protein product [Oryza sativa Japonica G... 76 3e-43
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 99.8 bits (247), Expect(4) = 1e-55
Identities = 43/76 (56%), Positives = 55/76 (72%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ R K F+WP MK V QF+ C VCQ NK +H+ PAGLLQPL +P+ +W HI+MDF+E
Sbjct: 468 YQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVE 527
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S K VI V+VD
Sbjct: 528 GLPKSEGKDVIWVIVD 543
Score = 79.3 bits (194), Expect(4) = 1e-55
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = -3
Query: 591 KYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGVTTH 412
KY+HFIPLSHPFTA + +FL + +KLHGLP+ I+SDRD+I S W+E+F+ GV H
Sbjct: 547 KYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGVKLH 606
Score = 72.0 bits (175), Expect(4) = 1e-55
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = -3
Query: 1296 VKIVQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDK 1117
++ ++KW+ + II D SLK+ EQR++ +Q K L+KL+ DY I+YKKG +
Sbjct: 310 LEALKKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKLLSYDYKIEYKKGQEN 369
Query: 1116 KSADALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESD 988
K+ADALSR+ N+ +I P W ++ SY +D
Sbjct: 370 KAADALSRMQQLNA--------LTTTVIVPQWITEVAASYSTD 404
Score = 37.7 bits (86), Expect(4) = 1e-55
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Frame = -2
Query: 943 PPYFIYKHGILRYKGILFVGSGNDI--------NASPIGGHSGIVGTSVELRHIF 803
PPY + K GILRYK + VG+GN + + S +GGHSG T ++ +F
Sbjct: 422 PPYTL-KGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLF 475
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 99.8 bits (247), Expect(4) = 1e-55
Identities = 43/76 (56%), Positives = 55/76 (72%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ R K F+WP MK V QF+ C VCQ NK +H+ PAGLLQPL +P+ +W HI+MDF+E
Sbjct: 247 YQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVE 306
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S K VI V+VD
Sbjct: 307 GLPKSEGKDVIWVIVD 322
Score = 79.3 bits (194), Expect(4) = 1e-55
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = -3
Query: 591 KYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGVTTH 412
KY+HFIPLSHPFTA + +FL + +KLHGLP+ I+SDRD+I S W+E+F+ GV H
Sbjct: 326 KYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGVKLH 385
Score = 72.0 bits (175), Expect(4) = 1e-55
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = -3
Query: 1296 VKIVQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDK 1117
++ ++KW+ + II D SLK+ EQR++ +Q K L+KL+ DY I+YKKG +
Sbjct: 89 LEALKKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKLLSYDYKIEYKKGQEN 148
Query: 1116 KSADALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESD 988
K+ADALSR+ N+ +I P W ++ SY +D
Sbjct: 149 KAADALSRMQQLNA--------LTTTVIVPQWITEVAASYSTD 183
Score = 37.7 bits (86), Expect(4) = 1e-55
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Frame = -2
Query: 943 PPYFIYKHGILRYKGILFVGSGNDI--------NASPIGGHSGIVGTSVELRHIF 803
PPY + K GILRYK + VG+GN + + S +GGHSG T ++ +F
Sbjct: 201 PPYTL-KGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLF 254
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 97.8 bits (242), Expect(4) = 2e-53
Identities = 42/76 (55%), Positives = 53/76 (69%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ RAK F+WP MK D+ ++ C VCQ NK +H+ GLL PL IP+ +W HISMDFIE
Sbjct: 913 YQRAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIE 972
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S K VI V+VD
Sbjct: 973 GLPKSDNKDVIWVIVD 988
Score = 73.9 bits (180), Expect(4) = 2e-53
Identities = 37/103 (35%), Positives = 59/103 (57%)
Frame = -3
Query: 1296 VKIVQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDK 1117
++ ++KW+ + II D SLK+ EQR++ +Q K L+KL+ DY I+YKKG +
Sbjct: 754 LEALKKWKHYFLGTSLIIRTDQASLKYINEQRLTEGIQHKLLIKLLSYDYKIEYKKGKEN 813
Query: 1116 KSADALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESD 988
K+ADALSR+P+ +I P W +++ SY +D
Sbjct: 814 KAADALSRIPS-------VAQLFSTTIIVPTWITEILASYATD 849
Score = 71.2 bits (173), Expect(4) = 2e-53
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -3
Query: 591 KYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGVTTH 412
KY+HF+ LSHPFTA + +F+ +K HGLP+ I+SDRD+I SQ W+++F+ GV H
Sbjct: 992 KYAHFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDRIFTSQTWKDVFEKAGVKLH 1051
Score = 38.5 bits (88), Expect(4) = 2e-53
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Frame = -2
Query: 943 PPYFIYKHGILRYKGILFVGSGNDINA--------SPIGGHSGIVGTSVELRHIF 803
PPY + GILRYK L+VG+G D+ A S +GGHSG T + +F
Sbjct: 867 PPYTLTS-GILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLF 920
Score = 98.2 bits (243), Expect = 3e-17
Identities = 49/149 (32%), Positives = 75/149 (50%)
Frame = -2
Query: 2077 DFPKFDGTNPRDWVRKCEHYFLLHKIEDSQKVYLASVHFDDKVEPWFFDYQQGKTNIPWE 1898
DFP F+G P W+RK E YF L++ + KV LA VH + + W ++ W
Sbjct: 291 DFPTFEGDYPESWIRKAEKYFSLYQTPEEDKVLLAEVHISGRADQWIESSAVPTASLSWP 350
Query: 1897 SFVMDLCVQFEDVAHDSHVDSFNKLSQTTTVEDYFDQFERLKTHMLAHNPNLTENYFVLS 1718
F +C +F + ++F L Q +V+ Y D+FE + NP LTE+YF+
Sbjct: 351 EFKTMVCQRFAAKSKIEITETFRNLKQYGSVDSYIDKFEETMALVKRSNPTLTEDYFLDY 410
Query: 1717 FIKGLKKEIRHPVQTCKPETTSRAFYLAR 1631
FI GLK I+ P+++ + A+ AR
Sbjct: 411 FISGLKGHIKRPLKSLSIYSLVTAYEHAR 439
>ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Zea mays]
gi|670423336|ref|XP_008652482.1| PREDICTED: transposon
Tf2-1 polyprotein isoform X1 [Zea mays]
Length = 1567
Score = 87.8 bits (216), Expect(4) = 6e-51
Identities = 43/76 (56%), Positives = 52/76 (68%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ R K F W +K+DV QF+ C VCQ K +H GLLQPL IP SWQ +SMDFIE
Sbjct: 1142 YQRVKKLFLWNGLKADVEQFVRQCHVCQQAKHEHCKYPGLLQPLPIPQSSWQDLSMDFIE 1201
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S+ +VILVVVD
Sbjct: 1202 GLPKSNGYSVILVVVD 1217
Score = 79.0 bits (193), Expect(4) = 6e-51
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = -3
Query: 597 LAKYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGVT 418
L KY+HF+ + HPFTA +A F S + KLHG P +I+SDRDK+ S FWQELFK G
Sbjct: 1219 LTKYAHFLAVKHPFTASHIAHLFFSQVVKLHGFPHTIVSDRDKVFTSTFWQELFKLSGTQ 1278
Query: 417 THKQITNKLYPAS 379
H +++ +P S
Sbjct: 1279 LH--LSSAYHPQS 1289
Score = 76.6 bits (187), Expect(4) = 6e-51
Identities = 40/100 (40%), Positives = 60/100 (60%)
Frame = -3
Query: 1287 VQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDKKSA 1108
V+KWR +LS F+I DH+SL H +Q ++T +Q+K + KL G + ++YKKG + K+A
Sbjct: 986 VEKWRCYLSRGPFVIRTDHRSLCHLQDQTLATDMQKKAMTKLAGLQFSVQYKKGAENKAA 1045
Query: 1107 DALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESD 988
DALSR+ N E + + P W Q++ SYE D
Sbjct: 1046 DALSRV-AHNMELS------AISATTPVWLQEITNSYELD 1078
Score = 29.6 bits (65), Expect(4) = 6e-51
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Frame = -2
Query: 934 FIYKHGILRYKGILFVGSG--------NDINASPIGGHSGIVGTSVELRHIF 803
F K+G++ L VG + +ASP+GGHSGI T ++ +F
Sbjct: 1098 FELKNGLIYKNNRLVVGQNVGLQTKLISAFHASPLGGHSGIQATYQRVKKLF 1149
Score = 107 bits (266), Expect = 7e-20
Identities = 74/272 (27%), Positives = 119/272 (43%), Gaps = 1/272 (0%)
Frame = -2
Query: 2086 PKFDFPKFDGTNPRDWVRKCEHYFLLHKIEDSQKVYLASVHFDDKVEPWFFDYQQGKTNI 1907
PK+DFP F+G R W+ CE YFLL++I + +V AS+H + W+ ++ +
Sbjct: 162 PKWDFPVFEGEEARVWIDNCEAYFLLYQIPEEFRVSAASLHLKGRAAHWYQSFRDSVGFV 221
Query: 1906 PWESFVMDLCVQFEDVAHDSHVDSFNKLSQTTTVEDYFDQFERLKTHMLAHNPNLTENYF 1727
W F +++ +F+ H + L QT TV +Y QFE+L + + ++E +
Sbjct: 222 DWIQFKLEIRNEFDLTTHSDRMLELLTLRQTGTVLEYKTQFEKLVYCIRLFDKAVSETFL 281
Query: 1726 VLSFIKGLKKEIRHPVQTCKPETTSRAFYLARMQQSYVTNQVQNPKTISKKRPPSTSHCS 1547
V F+ GLK E++ V+ P+T + A LA +S + H +
Sbjct: 282 VTQFVLGLKHELKVGVEMQFPKTVAMAAQLALKHESL-----------------HSRHTA 324
Query: 1546 NSSQSVKPTLSIPSSMDKPTISSSKPFVAHPHTTIKTAPDTAPIRRSKLTPGQIK-ARRD 1370
+ ++V P + T S + + A Q+K RR
Sbjct: 325 GTRKAVGVKGVPPVGFKEGTESQGELWKAK----------------------QLKDYRRA 362
Query: 1369 KGLCYNCDEYYRPDHICKTPQQLICKNCAKVE 1274
GLC+ C E Y P H CK P Q + NC +E
Sbjct: 363 NGLCFKCGEKYMPGHKCKVPVQPLL-NCISLE 393
>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2811
Score = 88.2 bits (217), Expect(4) = 2e-50
Identities = 41/76 (53%), Positives = 51/76 (67%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ R K F WP M+ DV +F+ CD+CQ K +H GLLQPL +P QSWQ I+MDFIE
Sbjct: 2364 YQRVKQLFSWPGMRKDVQEFVQHCDICQRAKSEHVKYPGLLQPLEVPSQSWQVITMDFIE 2423
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S ILV+VD
Sbjct: 2424 GLPKSASFDCILVIVD 2439
Score = 75.9 bits (185), Expect(4) = 2e-50
Identities = 40/100 (40%), Positives = 57/100 (57%)
Frame = -3
Query: 1287 VQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDKKSA 1108
+ WR +L ++F+I DH+SL QR+ST Q+K L KL+G Y I YKKG++ +A
Sbjct: 2206 IDHWRSYLQHDEFVIRTDHRSLSFLTNQRLSTPWQQKALTKLLGLRYKICYKKGLENGAA 2265
Query: 1107 DALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESD 988
DALSR + E + + P W Q+LI Y+SD
Sbjct: 2266 DALSRRQSDGLE-----EVSAISICLPDWLQELIDGYQSD 2300
Score = 75.9 bits (185), Expect(4) = 2e-50
Identities = 32/72 (44%), Positives = 51/72 (70%)
Frame = -3
Query: 594 AKYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGVTT 415
+K++HF+PL HPFTA VA+ F+ +I +HGLP +I+SDRD++ S W+ELF+ G T
Sbjct: 2442 SKFAHFLPLKHPFTAFGVAQLFMEHIHSIHGLPQAIVSDRDRVFTSSLWKELFRRAG--T 2499
Query: 414 HKQITNKLYPAS 379
++++ +P S
Sbjct: 2500 QLRMSSSYHPQS 2511
Score = 31.6 bits (70), Expect(4) = 2e-50
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Frame = -2
Query: 943 PPYFIYKHGILRYKGILFVGSGN--------DINASPIGGHSGIVGTSVELRHIFS 800
P F ++GIL +K +++G +++ + +GGHSGI+ T ++ +FS
Sbjct: 2317 PSNFEVQNGILYFKHRIWIGHNKLLQQKILANLHTAAVGGHSGILVTYQRVKQLFS 2372
Score = 85.1 bits (209), Expect = 3e-13
Identities = 77/307 (25%), Positives = 122/307 (39%), Gaps = 2/307 (0%)
Frame = -2
Query: 2215 VVPPPPSGDDCFTQPTKIDGSIPGSNSDSNPGIVKNQGTFHPTPKFDFPKFDGTNPRDWV 2036
+VPPP G ++ + G + +G H PK DFP+FDG++P++W
Sbjct: 1516 LVPPPGKGTHSLPFSPRVHPNFSEFVGREESGGSEGRGYNHRLPKLDFPQFDGSDPQNWR 1575
Query: 2035 RKCEHYFLLHKIEDSQKVYLASVHFDDKVEPWFFDYQQGKTNIPWESFVMDLCVQFEDVA 1856
+CEHYF ++ V +A+++F + W + W F + +F+
Sbjct: 1576 LRCEHYFGVYGTHPDLWVRVATIYFIGRAASWLRSSRAHLLCGNWGVFCDTVDRKFDRNR 1635
Query: 1855 HDSHVDSFNKLSQTTTVEDYFDQFERLKTHMLAHNPNL-TENYFVLSFIKGLKKEIRHPV 1679
H V ++L Q +V +Y+++F+ L + +L ++P L T N+F K KK H
Sbjct: 1636 HLQLVRQIDQLKQLGSVNEYYERFDDLWSQLLVYDPTLSTVNFFPSLVSKDGKKLGDH-- 1693
Query: 1678 QTCKPETTSRAFYLARMQQSYVTNQVQNPKTISKKRPPSTSHCSNSSQSVKPTLSIPSSM 1499
AR++ +Y P + PP H K T +P
Sbjct: 1694 -------------AARIKSAY-------PLPLP---PPKFVHAGKGDD--KRTAEVPK-- 1726
Query: 1498 DKPTISSSKPFVAHPHTTIKTAPDTAPIRRSKLTPGQIKA-RRDKGLCYNCDEYYRPDHI 1322
+SS VA +KA RR +GLCY C E + P H
Sbjct: 1727 ---VANSSDKLVA------------------------LKAYRRAQGLCYVCAEKWSPTHK 1759
Query: 1321 CKTPQQL 1301
C QL
Sbjct: 1760 CSGSVQL 1766
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 88.6 bits (218), Expect(4) = 2e-50
Identities = 40/76 (52%), Positives = 49/76 (64%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ R K F+WP +K V +I C CQ K +H GLL PL +PD +W HI+MDFIE
Sbjct: 1213 YHRIKQLFYWPGLKKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIE 1272
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S K VILVVVD
Sbjct: 1273 GLPKSQGKDVILVVVD 1288
Score = 80.5 bits (197), Expect(4) = 2e-50
Identities = 43/110 (39%), Positives = 60/110 (54%)
Frame = -3
Query: 1296 VKIVQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDK 1117
++ ++KWR ++ II D QSLK M QR+ +Q K L+KLM DY+I+YK G +
Sbjct: 1052 LEALKKWRHYILGGSLIIKTDQQSLKFMMSQRLVEGIQHKLLLKLMEFDYVIEYKSGKEN 1111
Query: 1116 KSADALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESDVV*HNRL 967
ADALSR P E + ++ P W QD+ SYE D+ H L
Sbjct: 1112 LVADALSRSPNLKEE-----QCLPITVVVPEWVQDIKRSYEEDIFAHKIL 1156
Score = 67.0 bits (162), Expect(4) = 2e-50
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = -3
Query: 597 LAKYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFK 433
L KY+HF+ LSHP+T V + F+ I KLHG+P I++DRD++ S F+QE+FK
Sbjct: 1290 LTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFK 1344
Score = 35.0 bits (79), Expect(4) = 2e-50
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Frame = -2
Query: 937 YFIYKHGILRYKGILFVGSGNDI--------NASPIGGHSGIVGTSVELRHIF 803
++ + G+L+YKG ++VG +I +AS GGHSGI T ++ +F
Sbjct: 1168 HYKLESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHRIKQLF 1220
Score = 78.2 bits (191), Expect = 3e-11
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Frame = -2
Query: 2086 PKFDFPKFDGTNPRDWVRKCEHYFLLHKIEDSQKVYLASVHFDDKVEPWFFDYQQGKTNI 1907
P+ + F G +P DW+++CE +F + Q V LA H + WF I
Sbjct: 230 PRLEISLFTGEDPVDWLKQCEKFFEITGTPVDQWVNLAVAHLYGRAAKWFRGVGLPWQVI 289
Query: 1906 PWESFVMDLCVQFEDVAHDSHVDSFNKLSQT-TTVEDYFDQFERLKTHMLAHNPNLTENY 1730
W + +C +F V+ F + Q TVE Y D+FE + +P L E Y
Sbjct: 290 TWPQWCAMVCTRFSTANTHEAVELFQNVKQYGMTVEQYIDKFEEYMDLVRRDHPYLQEPY 349
Query: 1729 FVLSFIKGLKKEIRHPVQTCKPETTSRAFYLAR 1631
F FI GL+ +I+H V KP+ +++ A+
Sbjct: 350 FTSCFISGLRGDIKHDVCGQKPQGLLESYWYAK 382
>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 592
Score = 91.7 bits (226), Expect(4) = 4e-50
Identities = 43/76 (56%), Positives = 53/76 (69%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ R K F WP+MK +V +F+ DVCQ N +H GLLQP+ IP+ +W HISMDFIE
Sbjct: 323 YQRLKLIFHWPRMKQEVEEFVKLYDVCQKNNCEHVPYPGLLQPIPIPEMAWTHISMDFIE 382
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S K VILVVVD
Sbjct: 383 GLPKSEDKEVILVVVD 398
Score = 75.9 bits (185), Expect(4) = 4e-50
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = -3
Query: 591 KYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGV 421
KYSHFI LSHPFT V K F+ +FK HGLPS II++RD + S WQ+LFK LGV
Sbjct: 402 KYSHFIALSHPFTVQHVVKVFVDNVFKHHGLPSVIITNRDMVFTSHLWQDLFKTLGV 458
Score = 65.5 bits (158), Expect(4) = 4e-50
Identities = 32/103 (31%), Positives = 59/103 (57%)
Frame = -3
Query: 1296 VKIVQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDK 1117
++ ++ W+ + + + II D QSLK+ EQ + +Q K L+KL+G +Y ++YK+G +
Sbjct: 164 LEAIKMWKHYFAGSTLIIRTDQQSLKYMQEQIIIEGVQHKLLVKLLGYNYKVEYKRGREN 223
Query: 1116 KSADALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESD 988
K+ DALSR+ ++ + + P W +++ SYE D
Sbjct: 224 KATDALSRVRYNDQ-------VVAISAVTPVWILEVLASYEGD 259
Score = 37.4 bits (85), Expect(4) = 4e-50
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Frame = -2
Query: 940 PYFIYKHGILRYKGILFVGSGNDI--------NASPIGGHSGIVGTSVELRHIF 803
P + K+GILRYKG L++GS + + S +GGHSG T L+ IF
Sbjct: 277 PNYSLKNGILRYKGRLYIGSNTGLKRQLLVTFHDSALGGHSGGRVTYQRLKLIF 330
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 90.1 bits (222), Expect(4) = 8e-50
Identities = 40/76 (52%), Positives = 52/76 (68%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ R K+ F+WP +K V FI C +CQ K +H GLL PL +PD +W HI+MDF+E
Sbjct: 1188 YHRIKSLFYWPGLKKAVEGFIRECPICQVTKAEHIHIPGLLDPLEVPDMAWAHITMDFVE 1247
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S+ K VILVVVD
Sbjct: 1248 GLPKSNGKDVILVVVD 1263
Score = 76.6 bits (187), Expect(4) = 8e-50
Identities = 43/110 (39%), Positives = 63/110 (57%)
Frame = -3
Query: 1296 VKIVQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDK 1117
++ ++KWR ++ ++ II D QSLK M QR+ +Q K L+KLM DY I+YK G +
Sbjct: 1029 LEALKKWRHYVLGSRLIIKTDQQSLKFMMNQRLVEGIQHKLLLKLMEYDYSIEYKAGKEN 1088
Query: 1116 KSADALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESDVV*HNRL 967
ADALSR+P + +C + + P W +D+ SYE DV H L
Sbjct: 1089 LVADALSRIPPA-EQCQ------AITTVIPEWVRDIQRSYEGDVQAHKIL 1131
Score = 67.8 bits (164), Expect(4) = 8e-50
Identities = 29/59 (49%), Positives = 44/59 (74%)
Frame = -3
Query: 597 LAKYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGV 421
L KY+HFI ++HP+T V + F++ I +LHG+P +II+DRD+I SQ +QE+FK + V
Sbjct: 1265 LTKYAHFIAMAHPYTVEQVVELFMNNIHRLHGMPMAIITDRDRIFTSQLFQEIFKSMKV 1323
Score = 34.7 bits (78), Expect(4) = 8e-50
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Frame = -2
Query: 919 GILRYKGILFVGSGNDI--------NASPIGGHSGIVGTSVELRHIF 803
G+LRYKG ++VG +I ++S GGHSG+ T ++ +F
Sbjct: 1149 GLLRYKGRIYVGENTEIREELIRSYHSSAFGGHSGMRATYHRIKSLF 1195
Score = 77.4 bits (189), Expect = 6e-11
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 1/195 (0%)
Frame = -2
Query: 2212 VPPPPSGDDCFTQPTKIDGSIPGSNSDSNPGIVKNQGTFHPTPKFDFPKFDGTNPRDWVR 2033
V P +G F Q I G G + I+K P+ + P F G +P DW++
Sbjct: 171 VNPGNTGVHIFDQQRNILGGHMGDGNHYAEAIIKG-------PRLEIPLFSGEDPIDWLK 223
Query: 2032 KCEHYFLLHKIEDSQKVYLASVHFDDKVEPWFFDYQQGKTNIPWESFVMDLCVQFEDVAH 1853
+CE ++ + Q V LA H K W+ I W + + +F
Sbjct: 224 QCEKFYEISGTPAEQWVNLAIAHLQGKAMKWYRGIGIPWQLITWPQWCAMVSTRFSAADT 283
Query: 1852 DSHVDSFNKLSQ-TTTVEDYFDQFERLKTHMLAHNPNLTENYFVLSFIKGLKKEIRHPVQ 1676
V+ F + Q TVE Y D+FE + +P L E Y FI GL+ +I+H V
Sbjct: 284 HEAVELFQNVKQYNQTVEQYIDKFEEYVDLVRREHPYLQEQYLNSCFIGGLRGDIKHDVC 343
Query: 1675 TCKPETTSRAFYLAR 1631
KP+ +++ +
Sbjct: 344 GHKPQGLLESYWYTK 358
>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1548
Score = 80.9 bits (198), Expect(4) = 1e-49
Identities = 42/76 (55%), Positives = 47/76 (61%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ R K F W +K V +FI C VCQ K +H GLLQPL IP +WQ ISMDFIE
Sbjct: 1124 YHRVKKLFVWKGLKHSVEEFIQQCVVCQKAKHEHCSSPGLLQPLPIPTGAWQDISMDFIE 1183
Query: 647 GLPQSHKKTVILVVVD 600
GLP S VILVVVD
Sbjct: 1184 GLPLSKGSDVILVVVD 1199
Score = 78.6 bits (192), Expect(4) = 1e-49
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = -3
Query: 591 KYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGVTTH 412
KY+HF+PL HPFTA+ VA +LS + L+G+P SI+SDRDKI S FWQ LFK + +
Sbjct: 1203 KYAHFLPLKHPFTAVQVADNYLSKVASLYGMPKSIVSDRDKIFTSHFWQHLFKRFAIPLN 1262
Query: 411 KQITNKLYPAS 379
+T +P S
Sbjct: 1263 --LTTAYHPQS 1271
Score = 75.5 bits (184), Expect(4) = 1e-49
Identities = 39/100 (39%), Positives = 56/100 (56%)
Frame = -3
Query: 1287 VQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDKKSA 1108
+ KWR +L F+I DHQSL H +Q + + LQRK + KL+G Y +YK+G + KSA
Sbjct: 968 IDKWRPYLLRGPFVIRTDHQSLCHLDDQLLGSELQRKAMTKLIGLQYKFQYKRGAENKSA 1027
Query: 1107 DALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESD 988
DALSR+ + + QP W Q+++ SY D
Sbjct: 1028 DALSRV-------GHFFSLQAISIAQPVWVQEVVNSYVVD 1060
Score = 33.5 bits (75), Expect(4) = 1e-49
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Frame = -2
Query: 958 LINPVPPYFIYKHGILRYKGILFVGSGNDINA--------SPIGGHSGIVGTSVELRHIF 803
+++P F HG+++ KG +++G+ + ++ S IGGHSG++ T ++ +F
Sbjct: 1072 IMSPNASGFSLVHGLIKKKGRIWLGANSALHTKIISSFHDSAIGGHSGVMATYHRVKKLF 1131
Score = 105 bits (262), Expect = 2e-19
Identities = 78/304 (25%), Positives = 129/304 (42%), Gaps = 7/304 (2%)
Frame = -2
Query: 2209 PPPPSGDDCFTQPTKIDGSIPGSNSDSNPGIVKNQGTFHPTPKFDFPKFDGTNPRDWVRK 2030
PPPP +P ++ S S S+ + Q T PK DFP+FDGT+ R W+
Sbjct: 112 PPPPPPPPFGRRPPQVSSSPSLSASEGGDSAPRRQWT----PKMDFPRFDGTDVRVWLDN 167
Query: 2029 CEHYFLLHKIEDSQKVYLASVHFDDKVEPWFFDYQQGKTNIPWESFVMDLCVQFEDVAHD 1850
CE YF ++I + +V AS++ W+ ++ WES + +FE
Sbjct: 168 CETYFGFYQITEGFQVSAASLNMIGDAANWYQAWKLETGWHNWESLKTAVLNEFEVNLES 227
Query: 1849 SHVDSFNKLSQTTTVEDYFDQFERLKTHMLAHNPNLTENYFVLSFIKGLKKEIRHPVQTC 1670
+D L+QT +V +Y +F +L + ++P L++ + + F+ GLK E+R VQ
Sbjct: 228 VKMDELLLLTQTGSVTEYRSKFNQLVYQLRLYDPLLSDTFLIRHFLLGLKDELRSAVQAQ 287
Query: 1669 KPETTSRAFYLARMQQSYVTNQVQNPKTISKKRPPSTSHCSNSSQSVKPTLSIPSSMDKP 1490
+P + S+A+ +A +S T +KK H +++ T
Sbjct: 288 QPTSVSQAYLVALAHESAQLG------TGTKK-----GHYKKEHVAIRGT---------- 326
Query: 1489 TISSSKPFVAHPHTTIKTAPDTAPIRRSKLTPGQI-------KARRDKGLCYNCDEYYRP 1331
+ KL PG++ + RR +GLC+ C E Y P
Sbjct: 327 -------------------------DKLKLAPGELWKAQQLKEYRRAQGLCFKCGEKYAP 361
Query: 1330 DHIC 1319
H+C
Sbjct: 362 GHVC 365
>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
Length = 933
Score = 81.3 bits (199), Expect(4) = 2e-49
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ R K+ F WP MK V + +++C VC K D S GLLQPL +PD +WQ ISMDFIE
Sbjct: 482 YKRIKSLFSWPHMKLTVQKQLASCAVCLQAKPDRSKYPGLLQPLPVPDGAWQIISMDFIE 541
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S+ + ILVVVD
Sbjct: 542 GLPKSYHQDCILVVVD 557
Score = 80.5 bits (197), Expect(4) = 2e-49
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = -3
Query: 594 AKYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGVTT 415
+KY+HF+PLSHPF+AL VAK F+ ++KLHGLP IISDRDKI S W++LF G
Sbjct: 560 SKYAHFMPLSHPFSALDVAKVFMLNVYKLHGLPQIIISDRDKIFTSALWEQLFLRSGTKL 619
Query: 414 HKQITNKLYPAS 379
H +++ +P S
Sbjct: 620 H--LSSAYHPQS 629
Score = 68.2 bits (165), Expect(4) = 2e-49
Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Frame = -3
Query: 1287 VQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDKKSA 1108
V WR +L +F+I DH SL H EQR+ T Q+K KL G + I Y+KG +A
Sbjct: 324 VDHWRPYLQFQEFLIITDHHSLMHLTEQRLHTPWQQKAFTKLSGLQFQIVYRKGKHNAAA 383
Query: 1107 DALSR-LPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESD 988
DALSR +P SE + P W QD++ Y+ D
Sbjct: 384 DALSRHVPEETSE------FLGISTCSPVWLQDILHGYDQD 418
Score = 38.1 bits (87), Expect(4) = 2e-49
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Frame = -2
Query: 961 LLINPVP-PYFIYKHGILRYKGILFVGSGNDINA--------SPIGGHSGIVGTSVELRH 809
L +NP P++ G++++KG ++VG+ ++I SP+GGHSG T ++
Sbjct: 428 LAVNPSSYPHYSLSKGLIKHKGKVWVGNNSNIQQQIISALHDSPLGGHSGFPVTYKRIKS 487
Query: 808 IFS 800
+FS
Sbjct: 488 LFS 490
>ref|XP_008655231.1| PREDICTED: uncharacterized protein LOC100382585 isoform X1 [Zea mays]
Length = 1543
Score = 81.6 bits (200), Expect(4) = 4e-49
Identities = 36/72 (50%), Positives = 55/72 (76%)
Frame = -3
Query: 594 AKYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGVTT 415
+K+ HF+PLSHP+TA SVA+ FLS+I++LHG P++I+SDRD I S FW++LF+ G T
Sbjct: 1285 SKFGHFVPLSHPYTAHSVAQLFLSHIYRLHGFPAAIVSDRDPIFTSAFWRQLFQLAG--T 1342
Query: 414 HKQITNKLYPAS 379
++++ +P S
Sbjct: 1343 ELRLSSSYHPQS 1354
Score = 75.1 bits (183), Expect(4) = 4e-49
Identities = 37/76 (48%), Positives = 46/76 (60%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+SR K+ F W MKS V F+ C +C K D + G LQPL +P +W ISMDF+E
Sbjct: 1207 YSRVKSIFAWKNMKSFVRSFVQQCQICLQAKPDRAAYPGKLQPLPVPPSAWHTISMDFVE 1266
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S ILVVVD
Sbjct: 1267 GLPRSGSWDCILVVVD 1282
Score = 70.1 bits (170), Expect(4) = 4e-49
Identities = 41/116 (35%), Positives = 63/116 (54%)
Frame = -3
Query: 1335 GLITFAKHHNN*FVKIVQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMG 1156
GL T+ K + VQ+WR +L +F+I DH+SL EQR+ T Q K KL+G
Sbjct: 1041 GLSTYEKEY-----LAVQQWRAYLQHQKFVIITDHKSLSQLNEQRLHTPWQHKVFTKLLG 1095
Query: 1155 SDYIIKYKKGMDKKSADALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESD 988
Y ++Y+ G + ++ADALSR +E N + ++ P W D+ +Y+SD
Sbjct: 1096 LQYRVQYRPGTENRAADALSRY--GPAEIN------AVSVVIPQWLTDIQQTYDSD 1143
Score = 40.0 bits (92), Expect(4) = 4e-49
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Frame = -2
Query: 985 RVAQQIA*LLINPVP-PYFIYKHGILRYKGILFVGSGNDINA--------SPIGGHSGIV 833
+ + +A L I+P +F K G++RYK L++G + A SPIGGHSG+
Sbjct: 1145 KTKELVAKLAIDPAAVAHFSLKDGLIRYKNRLWIGEDPHLQAKIVSALHSSPIGGHSGVP 1204
Query: 832 GTSVELRHIFS 800
T ++ IF+
Sbjct: 1205 VTYSRVKSIFA 1215
Score = 95.1 bits (235), Expect = 3e-16
Identities = 67/262 (25%), Positives = 110/262 (41%)
Frame = -2
Query: 2086 PKFDFPKFDGTNPRDWVRKCEHYFLLHKIEDSQKVYLASVHFDDKVEPWFFDYQQGKTNI 1907
PK +FP FDGT P+ W ++CE YF ++ E V ++++HF W + ++
Sbjct: 229 PKLNFPTFDGTYPKLWQKRCEDYFEMYATETFVWVKVSTMHFVGAAARWLQSIEPRLPSM 288
Query: 1906 PWESFVMDLCVQFEDVAHDSHVDSFNKLSQTTTVEDYFDQFERLKTHMLAHNPNLTENYF 1727
W F + +F H+ + + QT+TV+DY D+F L ++ + Y+
Sbjct: 289 SWRQFCQAIHDRFGREQHELVIRKLFHIKQTSTVQDYVDRFSELVDLLVTYEHTTDPLYY 348
Query: 1726 VLSFIKGLKKEIRHPVQTCKPETTSRAFYLARMQQSYVTNQVQNPKTISKKRPPSTSHCS 1547
+ FI GL+ +I+ + +P A LA +Q++ S +RP S
Sbjct: 349 TMKFIDGLRDDIKSVILVQRPGDLDTACSLALLQEA----------GDSSRRPDPVHGDS 398
Query: 1546 NSSQSVKPTLSIPSSMDKPTISSSKPFVAHPHTTIKTAPDTAPIRRSKLTPGQIKARRDK 1367
+ + ++P S P + KT AP SK+ + RR
Sbjct: 399 SYAGRSSWKSAVPQSARWDPSRGLAP------ESSKTPTQPAPTIDSKVASLR-SYRRAS 451
Query: 1366 GLCYNCDEYYRPDHICKTPQQL 1301
GLC C E + H C QL
Sbjct: 452 GLCQYCAEKWNKGHKCSPTVQL 473
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 87.0 bits (214), Expect(4) = 2e-48
Identities = 41/74 (55%), Positives = 49/74 (66%)
Frame = -1
Query: 821 RAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIEGL 642
R K F+W M+ +V +FI C CQ K +H GLL PL IPD +W HI+MDFIEGL
Sbjct: 1079 RIKMLFYWHGMRGEVERFIRECPTCQITKSEHVHIPGLLNPLEIPDMAWTHITMDFIEGL 1138
Query: 641 PQSHKKTVILVVVD 600
P+S K VILVVVD
Sbjct: 1139 PKSQGKDVILVVVD 1152
Score = 77.4 bits (189), Expect(4) = 2e-48
Identities = 43/110 (39%), Positives = 63/110 (57%)
Frame = -3
Query: 1296 VKIVQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDK 1117
++ ++KWR ++ ++ II D QSLK M QR+ +Q K L+KLM DY I+YK G +
Sbjct: 914 LEALKKWRHYVLGSKLIIKTDQQSLKFMMGQRLVEGIQHKLLLKLMEYDYTIEYKSGKEN 973
Query: 1116 KSADALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESDVV*HNRL 967
ADALSRLP + + + ++ P W D+ SYE+DV H L
Sbjct: 974 LVADALSRLPQKEAVAD---RCHPMTVVIPEWIVDIQRSYENDVQAHKIL 1020
Score = 65.5 bits (158), Expect(4) = 2e-48
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = -3
Query: 597 LAKYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGV 421
L KY+HFI L+HP+ V + F++ I KLHG+P II+DRD+I S +QE+FK + V
Sbjct: 1154 LTKYAHFIALAHPYDVEQVVEAFMNNIHKLHGMPMVIITDRDRIFTSSLFQEIFKAMKV 1212
Score = 35.0 bits (79), Expect(4) = 2e-48
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Frame = -2
Query: 919 GILRYKGILFVGSGNDI--------NASPIGGHSGIVGTSVELRHIF 803
G+L+YKG ++VG DI ++S GGHSG+ T ++ +F
Sbjct: 1038 GLLKYKGRIYVGEATDIRRQLITTYHSSSFGGHSGMRATHHRIKMLF 1084
Score = 83.2 bits (204), Expect = 1e-12
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Frame = -2
Query: 2086 PKFDFPKFDGTNPRDWVRKCEHYFLLHKIEDSQKVYLASVHFDDKVEPWFFDYQQGKTNI 1907
P+ + P F G +P DW+++CE +F + Q V LA H + + WF I
Sbjct: 96 PRLEIPLFSGEDPIDWLKQCEKFFEITGTPLDQWVNLAVAHLNGRALKWFGGIGLPWQVI 155
Query: 1906 PWESFVMDLCVQFEDVAHDSHVDSFNKLSQ-TTTVEDYFDQFERLKTHMLAHNPNLTENY 1730
W + +C +F + ++ F + Q TTVE Y D+FE + +P L E Y
Sbjct: 156 AWPQWCSMVCTRFSAASEHEAIELFQNVKQFGTTVEQYIDKFEDYVDLVKRDHPYLQEQY 215
Query: 1729 FVLSFIKGLKKEIRHPVQTCKPETTSRAFYLA---RMQQSYVTNQVQNP 1592
FI GL+ +I++ V KP+ ++ A +M ++ N+ QNP
Sbjct: 216 LTSCFIGGLRADIKYDVCGQKPQGLLETYWAANARKMVGNFNRNRNQNP 264
>gb|ABA97403.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 562
Score = 97.4 bits (241), Expect(4) = 4e-48
Identities = 41/76 (53%), Positives = 53/76 (69%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ RAK F+WP MK D+ ++ C VCQ NK +H+ GLL PL +P+ +W HISMDFIE
Sbjct: 326 YQRAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPVPEMAWTHISMDFIE 385
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S K VI V+VD
Sbjct: 386 GLPKSDNKDVIWVIVD 401
Score = 69.3 bits (168), Expect(4) = 4e-48
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = -3
Query: 591 KYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGVTTH 412
KY+HF+ LSHPFTA + +F+ +K HGLP+ I+SDRD I SQ W+++F+ GV H
Sbjct: 405 KYAHFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDIIFTSQTWKDVFEKAGVKLH 464
Score = 59.7 bits (143), Expect(4) = 4e-48
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = -3
Query: 1236 DHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDKKSADALSRLPTSNSECNXXX 1057
D SLK+ EQR++ +Q K L+KL+ +Y I+YKKG + K+ADALSR+P
Sbjct: 187 DQASLKYINEQRLTKGIQHKLLIKLLNYNYKIEYKKGKENKAADALSRIP-------FVA 239
Query: 1056 XXXXLMLIQPHWDQDLITSYESD 988
+I P W +++ SY +D
Sbjct: 240 QWFSTTIIVPTWIIEILASYATD 262
Score = 37.0 bits (84), Expect(4) = 4e-48
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Frame = -2
Query: 940 PYFIYKHGILRYKGILFVGSGNDINA--------SPIGGHSGIVGTSVELRHIF 803
P + GILRYK L+VG+G D+ A S +GGHSG T + +F
Sbjct: 280 PSYTLTGGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLF 333
>gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyprotein [Oryza sativa Japonica
Group] gi|108706266|gb|ABF94061.1| retrotransposon
protein, putative, unclassified, expressed [Oryza sativa
Japonica Group]
Length = 1159
Score = 84.7 bits (208), Expect(4) = 8e-47
Identities = 45/100 (45%), Positives = 61/100 (61%)
Frame = -3
Query: 1287 VQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDKKSA 1108
V KWR +L FII DH+SL H +Q + T LQ+K + KLMG Y +YK+G+D A
Sbjct: 144 VDKWRCYLQRGPFIIKTDHKSLCHLDDQILGTELQQKAMTKLMGLQYSFQYKRGVDNIVA 203
Query: 1107 DALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESD 988
DALSR+P+S+ C L ++QP W Q++I SY D
Sbjct: 204 DALSRMPSSSQFC-------ALSVVQPIWIQEVINSYTVD 236
Score = 82.0 bits (201), Expect(4) = 8e-47
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ R K F WP +K DV F+ C VCQ K +H GLL PL IP ++WQ ISMDFIE
Sbjct: 300 YHRFKKLFAWPGLKLDVENFVKQCQVCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIE 359
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S ILVVVD
Sbjct: 360 GLPRSDGYNAILVVVD 375
Score = 61.6 bits (148), Expect(4) = 8e-47
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = -3
Query: 591 KYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELF 436
KY+ FIPL HPFTA VA +FK G+P SI+SDRD++ S+FW LF
Sbjct: 379 KYADFIPLRHPFTASQVAHLVDKTVFKTQGIPRSIVSDRDRLFTSKFWTTLF 430
Score = 30.8 bits (68), Expect(4) = 8e-47
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 8/48 (16%)
Frame = -2
Query: 919 GILRYKGILFVGSGNDIN--------ASPIGGHSGIVGTSVELRHIFS 800
GI+R++ +++GS ++ AS +GGHSGI T + +F+
Sbjct: 261 GIIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHRFKKLFA 308
>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 937
Score = 82.4 bits (202), Expect(4) = 4e-46
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ R K F WP +K DV F+ C VCQ K +H GLL PL IP ++WQ ISMDFIE
Sbjct: 516 YHRIKKLFAWPGLKLDVENFVKQCQVCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIE 575
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S ILVVVD
Sbjct: 576 GLPRSDGYNAILVVVD 591
Score = 77.4 bits (189), Expect(4) = 4e-46
Identities = 41/100 (41%), Positives = 58/100 (58%)
Frame = -3
Query: 1287 VQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDKKSA 1108
V KWR +L FII H+ L H +Q + T LQ+K + KLMG Y +YK+G++ A
Sbjct: 360 VDKWRCYLQRGPFIIKTYHKILCHLDDQILGTELQQKAMTKLMGLQYSFQYKRGVNNIVA 419
Query: 1107 DALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESD 988
DALSR+P+S+ C ++QP W Q++I SY D
Sbjct: 420 DALSRMPSSSQFC-------AFSVVQPIWIQEMINSYTVD 452
Score = 65.5 bits (158), Expect(4) = 4e-46
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = -3
Query: 591 KYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELF 436
KY++FIPL HPFTA VA +FK HG+P SI+SDRD++ S+FW LF
Sbjct: 595 KYANFIPLRHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFTSKFWTTLF 646
Score = 31.6 bits (70), Expect(4) = 4e-46
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 8/48 (16%)
Frame = -2
Query: 919 GILRYKGILFVGSGNDIN--------ASPIGGHSGIVGTSVELRHIFS 800
GI+R++ +++GS ++ AS +GGHSGI T ++ +F+
Sbjct: 477 GIIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHRIKKLFA 524
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 92.0 bits (227), Expect(3) = 7e-46
Identities = 51/111 (45%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = -1
Query: 929 LQAWHS-TI*GHTLCGFR**Y*CFTHRGTFRYSGHFSRAKTYFFWPKMKSDVIQFISTCD 753
+QA+HS T GH CG R + R K F+WP +K V I C
Sbjct: 539 IQAYHSSTFGGH--CGIR---------------ATYQRIKKLFYWPGLKKGVENHIRNCP 581
Query: 752 VCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIEGLPQSHKKTVILVVVD 600
VCQ K +H GLL PL +PD +W HISMDF+EGLP+S K VILVVVD
Sbjct: 582 VCQVTKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKGKDVILVVVD 632
Score = 75.5 bits (184), Expect(3) = 7e-46
Identities = 40/110 (36%), Positives = 61/110 (55%)
Frame = -3
Query: 1296 VKIVQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDK 1117
++ +++WR ++ + +I D QSLK+ M QR+ +Q K L+KLM +Y I+YK G +
Sbjct: 393 LEALKRWRHYVLGGELVIKTDQQSLKYMMNQRLVEGIQHKLLLKLMEYNYTIEYKAGREN 452
Query: 1116 KSADALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESDVV*HNRL 967
ADALSR P + E + ++ P W D+ SYE DV H L
Sbjct: 453 LVADALSRSPKNKEEVT--ELCAAIAVVVPEWILDIKRSYEEDVQAHKLL 500
Score = 68.2 bits (165), Expect(3) = 7e-46
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -3
Query: 597 LAKYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFK 433
L KY+HFI LSHP+T V + F+ I KLHG+P +I++DRD++ S F+QE+FK
Sbjct: 634 LTKYAHFIALSHPYTVEEVVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVFK 688
>emb|CAE04934.2| OSJNBa0017P10.11 [Oryza sativa Japonica Group]
Length = 1012
Score = 84.7 bits (208), Expect(4) = 3e-45
Identities = 37/62 (59%), Positives = 48/62 (77%)
Frame = -3
Query: 594 AKYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFKCLGVTT 415
+KY+HFIPL HPFT SVA+EF+++++KLHGLP +IISDRD+I SQ W+ LF G
Sbjct: 616 SKYAHFIPLYHPFTTASVAQEFMTHVYKLHGLPRTIISDRDRIFTSQLWEFLFTKSGTKL 675
Query: 414 HK 409
HK
Sbjct: 676 HK 677
Score = 82.4 bits (202), Expect(4) = 3e-45
Identities = 38/76 (50%), Positives = 50/76 (65%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+ RAK F WP MK ++ + C VC +K D + GLLQPL +P+ +WQ +S+DFIE
Sbjct: 538 YRRAKALFAWPSMKKMILSLLKQCQVCLQSKPDRAKYPGLLQPLPVPEGAWQVVSLDFIE 597
Query: 647 GLPQSHKKTVILVVVD 600
GLP+SH ILVVVD
Sbjct: 598 GLPKSHGFNCILVVVD 613
Score = 49.7 bits (117), Expect(4) = 3e-45
Identities = 27/74 (36%), Positives = 41/74 (55%)
Frame = -3
Query: 1209 EQRMSTTLQRKQLMKLMGSDYIIKYKKGMDKKSADALSRLPTSNSECNXXXXXXXLMLIQ 1030
+QR+ T+ Q+K KLMG Y ++Y+KG+ +ADALSR T S + +
Sbjct: 406 DQRLHTSWQQKAFTKLMGLQYKVRYRKGISNAAADALSRNDTIPSS-----EVLAVSVCT 460
Query: 1029 PHWDQDLITSYESD 988
P W Q+++ YE D
Sbjct: 461 PLWLQEVVKGYEPD 474
Score = 37.0 bits (84), Expect(4) = 3e-45
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Frame = -2
Query: 979 AQQIA*LLINPVP-PYFIYKHGILRYKGILFVGSG--------NDINASPIGGHSGIVGT 827
+Q +A L+++P +F G+LRYKG +++G+ +++++S +GGHSGI T
Sbjct: 478 SQILAELVVHPTARKHFTLSQGLLRYKGRIWIGNNTQLQHIIIDELHSSFMGGHSGIPVT 537
Query: 826 SVELRHIFS 800
+ +F+
Sbjct: 538 YRRAKALFA 546
>gb|AAP52367.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 415
Score = 77.4 bits (189), Expect(4) = 2e-43
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
++R KT F W ++K+ V ++ C+VCQ K +H +GLLQ L +P Q+W +S+DFIE
Sbjct: 170 YNRVKTLFSWSRLKNYVQTYVQGCEVCQKAKSEHCKLSGLLQTLPVPLQAWSTVSLDFIE 229
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S K IL VVD
Sbjct: 230 GLPKSGKFDTILAVVD 245
Score = 72.8 bits (177), Expect(4) = 2e-43
Identities = 36/95 (37%), Positives = 56/95 (58%)
Frame = -3
Query: 1287 VQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDKKSA 1108
V +WR +L + F I DH++L H EQ++ T++Q+K +KLMG Y IKYKKG++ +A
Sbjct: 15 VDRWRSYLQHSVFTIVTDHRNLTHLTEQKLVTSMQQKAFLKLMGLQYKIKYKKGLENTAA 74
Query: 1107 DALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLIT 1003
DALSR + + +IQ +++D T
Sbjct: 75 DALSRQVEEDQHSMSISVPRWMEIIQEGYEKDEAT 109
Score = 66.2 bits (160), Expect(4) = 2e-43
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = -3
Query: 591 KYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFK 433
K++ FI LSHPFTAL+VA+ F+ ++++ G+P IISDRD++ S WQELF+
Sbjct: 249 KFAKFIALSHPFTALTVAQAFIQNVYEMFGMPRVIISDRDRMFTSALWQELFR 301
Score = 31.6 bits (70), Expect(4) = 2e-43
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Frame = -2
Query: 934 FIYKHGILRYKGILFVGSGND--------INASPIGGHSGIVGTSVELRHIFS 800
F GI+R+ G +++G + +++S +GGHSGI T ++ +FS
Sbjct: 126 FQLMQGIIRHNGKIWLGQHEEAKQAVLLALHSSGVGGHSGITATYNRVKTLFS 178
>gb|AAM01152.2|AC113336_4 Putative retroelement [Oryza sativa Japonica Group]
Length = 575
Score = 77.4 bits (189), Expect(4) = 3e-43
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
++R KT F W ++K+ V ++ C+VCQ K +H +GLLQ L +P Q+W +S+DFIE
Sbjct: 270 YNRVKTLFSWSRLKNYVQTYVQGCEVCQKAKSEHCKLSGLLQTLPVPLQAWSTVSLDFIE 329
Query: 647 GLPQSHKKTVILVVVD 600
GLP+S K IL VVD
Sbjct: 330 GLPKSGKFDTILAVVD 345
Score = 71.6 bits (174), Expect(4) = 3e-43
Identities = 35/95 (36%), Positives = 56/95 (58%)
Frame = -3
Query: 1287 VQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDKKSA 1108
+ +WR +L + F I DH++L H EQ++ T++Q+K +KLMG Y IKYKKG++ +A
Sbjct: 115 MDRWRSYLQHSVFTIVTDHRNLTHLTEQKLVTSMQQKAFLKLMGLQYKIKYKKGLENTAA 174
Query: 1107 DALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLIT 1003
DALSR + + +IQ +++D T
Sbjct: 175 DALSRQVEEDQHSMSISVPRWMEIIQEGYEKDEAT 209
Score = 66.2 bits (160), Expect(4) = 3e-43
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = -3
Query: 591 KYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFK 433
K++ FI LSHPFTAL+VA+ F+ ++++ G+P IISDRD++ S WQELF+
Sbjct: 349 KFAKFIALSHPFTALTVAQAFIQNVYEMFGMPRVIISDRDRMFTSALWQELFR 401
Score = 31.6 bits (70), Expect(4) = 3e-43
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Frame = -2
Query: 934 FIYKHGILRYKGILFVGSGND--------INASPIGGHSGIVGTSVELRHIFS 800
F GI+R+ G +++G + +++S +GGHSGI T ++ +FS
Sbjct: 226 FQLMQGIIRHNGKIWLGQHEEAKQAVLLALHSSGVGGHSGITATYNRVKTLFS 278
>dbj|BAG90661.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737344|dbj|BAG96273.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 459
Score = 76.3 bits (186), Expect(4) = 3e-43
Identities = 36/76 (47%), Positives = 48/76 (63%)
Frame = -1
Query: 827 FSRAKTYFFWPKMKSDVIQFISTCDVCQCNKGDHSFPAGLLQPLLIPDQSWQHISMDFIE 648
+SR + F WP +K V QF+S C +C+ K + GLLQPL +P+ +W +S+DFIE
Sbjct: 193 YSRVRRLFAWPGLKQAVRQFVSNCSICKQAKAERVRYPGLLQPLPVPEHAWVTVSLDFIE 252
Query: 647 GLPQSHKKTVILVVVD 600
GLP S ILVVVD
Sbjct: 253 GLPSSAGFDCILVVVD 268
Score = 68.6 bits (166), Expect(4) = 3e-43
Identities = 36/101 (35%), Positives = 55/101 (54%)
Frame = -3
Query: 1287 VQKWRQHLSSNQFIIHRDHQSLKHFMEQRMSTTLQRKQLMKLMGSDYIIKYKKGMDKKSA 1108
V WR +L +FII D +SL H +QR+ T+ Q++ L KL+G Y + YKKG++ K+A
Sbjct: 35 VDHWRSYLQFGEFIIRTDQRSLIHLDDQRLVTSWQQRALTKLLGLSYRLVYKKGLENKAA 94
Query: 1107 DALSRLPTSNSECNXXXXXXXLMLIQPHWDQDLITSYESDV 985
D LSR N + P W +++ Y+SD+
Sbjct: 95 DVLSR-----CRSNEVYQLSTVSSCVPSWLEEVQKGYDSDI 130
Score = 65.1 bits (157), Expect(4) = 3e-43
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = -3
Query: 594 AKYSHFIPLSHPFTALSVAKEFLSYIFKLHGLPSSIISDRDKIVISQFWQELFK 433
+KY+HF+ L HPFTA VA +L+ ++KL+GLP IISDR +I S W ELF+
Sbjct: 271 SKYAHFLALVHPFTAFDVALAYLNNVYKLYGLPHHIISDRVRIFTSALWTELFQ 324
Score = 37.0 bits (84), Expect(4) = 3e-43
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Frame = -2
Query: 979 AQQIA*LLINPVP-PYFIYKHGILRYKGILFVGSGNDI--------NASPIGGHSGIVGT 827
+Q +A +L++P P + K+GIL Y ++++G+ +++ + S +GGHSGI T
Sbjct: 133 SQLLAKVLLSPSQFPSYSLKNGILYYMRLIWLGANSELQLKILSAFHCSAVGGHSGIQVT 192
Query: 826 SVELRHIFS 800
+R +F+
Sbjct: 193 YSRVRRLFA 201