BLASTX nr result

ID: Papaver30_contig00039625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00039625
         (1348 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009356323.1| PREDICTED: mediator of RNA polymerase II tra...    74   4e-10
ref|XP_009356316.1| PREDICTED: mediator of RNA polymerase II tra...    74   4e-10
ref|XP_011021763.1| PREDICTED: mediator of RNA polymerase II tra...    73   6e-10
ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu...    73   6e-10
ref|XP_009336608.1| PREDICTED: mediator of RNA polymerase II tra...    72   1e-09
ref|XP_009336607.1| PREDICTED: mediator of RNA polymerase II tra...    72   1e-09
ref|XP_009336606.1| PREDICTED: mediator of RNA polymerase II tra...    72   1e-09
ref|XP_009336605.1| PREDICTED: mediator of RNA polymerase II tra...    72   1e-09
gb|AGM20684.1| PFT [Populus tomentosa]                                 72   1e-09
ref|XP_011655762.1| PREDICTED: mediator of RNA polymerase II tra...    70   3e-09
gb|KGN52054.1| hypothetical protein Csa_5G608420 [Cucumis sativus]     70   3e-09
ref|XP_008446563.1| PREDICTED: mediator of RNA polymerase II tra...    70   3e-09
ref|XP_008243186.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...    70   4e-09
gb|KDO70072.1| hypothetical protein CISIN_1g003284mg [Citrus sin...    70   4e-09
gb|KDO70071.1| hypothetical protein CISIN_1g003284mg [Citrus sin...    70   4e-09
gb|KDO70070.1| hypothetical protein CISIN_1g003284mg [Citrus sin...    70   4e-09
gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sin...    70   4e-09
gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sin...    70   4e-09
emb|CBI27055.3| unnamed protein product [Vitis vinifera]               70   4e-09
ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II tra...    70   4e-09

>ref|XP_009356323.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X2 [Pyrus x bretschneideri]
           gi|694311125|ref|XP_009356332.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 25-like isoform
           X2 [Pyrus x bretschneideri]
           gi|694311127|ref|XP_009356340.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 25-like isoform
           X2 [Pyrus x bretschneideri]
          Length = 839

 Score = 73.6 bits (179), Expect = 4e-10
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWTRD D+FLHWLSA+PFSGGGF DAA+ EGL+EALM+
Sbjct: 71  SGWTRDVDLFLHWLSAIPFSGGGFSDAAIAEGLSEALMM 109


>ref|XP_009356316.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X1 [Pyrus x bretschneideri]
          Length = 846

 Score = 73.6 bits (179), Expect = 4e-10
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWTRD D+FLHWLSA+PFSGGGF DAA+ EGL+EALM+
Sbjct: 71  SGWTRDVDLFLHWLSAIPFSGGGFSDAAIAEGLSEALMM 109


>ref|XP_011021763.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Populus euphratica]
          Length = 857

 Score = 72.8 bits (177), Expect = 6e-10
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWTRD D+FLHWLSA+PF+GGGF DAA+ EGL+EALM+
Sbjct: 71  SGWTRDVDIFLHWLSAIPFAGGGFNDAAIAEGLSEALMM 109


>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
           gi|550332870|gb|EEE88812.2| hypothetical protein
           POPTR_0008s11650g [Populus trichocarpa]
          Length = 896

 Score = 72.8 bits (177), Expect = 6e-10
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWTRD D+FLHWLSA+PF+GGGF DAA+ EGL+EALM+
Sbjct: 71  SGWTRDVDIFLHWLSAIPFAGGGFNDAAIAEGLSEALMM 109


>ref|XP_009336608.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X4 [Pyrus x bretschneideri]
           gi|694417031|ref|XP_009336609.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 25-like isoform
           X4 [Pyrus x bretschneideri]
          Length = 626

 Score = 72.0 bits (175), Expect = 1e-09
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWTRD D+FLHWLSA+PFSGGGF DAA+ EGL+EA+M+
Sbjct: 15  SGWTRDVDLFLHWLSAIPFSGGGFGDAAIAEGLSEAIMM 53


>ref|XP_009336607.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X3 [Pyrus x bretschneideri]
          Length = 657

 Score = 72.0 bits (175), Expect = 1e-09
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWTRD D+FLHWLSA+PFSGGGF DAA+ EGL+EA+M+
Sbjct: 71  SGWTRDVDLFLHWLSAIPFSGGGFGDAAIAEGLSEAIMM 109


>ref|XP_009336606.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X2 [Pyrus x bretschneideri]
          Length = 658

 Score = 72.0 bits (175), Expect = 1e-09
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWTRD D+FLHWLSA+PFSGGGF DAA+ EGL+EA+M+
Sbjct: 71  SGWTRDVDLFLHWLSAIPFSGGGFGDAAIAEGLSEAIMM 109


>ref|XP_009336605.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X1 [Pyrus x bretschneideri]
          Length = 682

 Score = 72.0 bits (175), Expect = 1e-09
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWTRD D+FLHWLSA+PFSGGGF DAA+ EGL+EA+M+
Sbjct: 71  SGWTRDVDLFLHWLSAIPFSGGGFGDAAIAEGLSEAIMM 109


>gb|AGM20684.1| PFT [Populus tomentosa]
          Length = 889

 Score = 72.0 bits (175), Expect = 1e-09
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWTRD D+FL WLSA+PF+GGGF DAA+GEGL+EALM+
Sbjct: 93  SGWTRDVDIFLQWLSAIPFAGGGFNDAAIGEGLSEALMM 131


>ref|XP_011655762.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
           [Cucumis sativus]
          Length = 886

 Score = 70.5 bits (171), Expect = 3e-09
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           +GWTRD D+F+ WLSA+PFSGGGF DAA+ EGLAEALM+
Sbjct: 71  TGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMM 109


>gb|KGN52054.1| hypothetical protein Csa_5G608420 [Cucumis sativus]
          Length = 680

 Score = 70.5 bits (171), Expect = 3e-09
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           +GWTRD D+F+ WLSA+PFSGGGF DAA+ EGLAEALM+
Sbjct: 71  TGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMM 109


>ref|XP_008446563.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
           [Cucumis melo]
          Length = 843

 Score = 70.5 bits (171), Expect = 3e-09
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           +GWTRD D+F+ WLSA+PFSGGGF DAA+ EGLAEALM+
Sbjct: 71  TGWTRDVDIFMQWLSAIPFSGGGFSDAAIAEGLAEALMM 109


>ref|XP_008243186.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
           transcription subunit 25 [Prunus mume]
          Length = 868

 Score = 70.1 bits (170), Expect = 4e-09
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWTRD D+FL WLSA+PFSGGGF DAA+ EGL+EALM+
Sbjct: 71  SGWTRDLDLFLQWLSAIPFSGGGFSDAAIAEGLSEALMM 109


>gb|KDO70072.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 619

 Score = 70.1 bits (170), Expect = 4e-09
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWT+D D+FLHWLS +PF+GGGF DAA+ EGL+EALM+
Sbjct: 71  SGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMM 109


>gb|KDO70071.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 601

 Score = 70.1 bits (170), Expect = 4e-09
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWT+D D+FLHWLS +PF+GGGF DAA+ EGL+EALM+
Sbjct: 71  SGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMM 109


>gb|KDO70070.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 818

 Score = 70.1 bits (170), Expect = 4e-09
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWT+D D+FLHWLS +PF+GGGF DAA+ EGL+EALM+
Sbjct: 55  SGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMM 93


>gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 834

 Score = 70.1 bits (170), Expect = 4e-09
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWT+D D+FLHWLS +PF+GGGF DAA+ EGL+EALM+
Sbjct: 71  SGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMM 109


>gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 833

 Score = 70.1 bits (170), Expect = 4e-09
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -3

Query: 380 SGWTRDADVFLHWLSAVPFSGGGFIDAAVGEGLAEALMV 264
           SGWT+D D+FLHWLS +PF+GGGF DAA+ EGL+EALM+
Sbjct: 70  SGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMM 108


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score = 70.1 bits (170), Expect = 4e-09
 Identities = 39/86 (45%), Positives = 50/86 (58%)
 Frame = -3

Query: 521 HFCLRRLLGKQ*EH*YHSLPFSMFVDCLKLCLRLTINGVF*SSIGL*SGWTRDADVFLHW 342
           +FC   L G++       L   MF            +G + S +   SGWTRD D+FL W
Sbjct: 34  YFCGNELAGQKPSSSNFELSLVMF----------NAHGSYCSCLVQRSGWTRDVDLFLQW 83

Query: 341 LSAVPFSGGGFIDAAVGEGLAEALMV 264
           LSA+PF+GGGF DAA+ EGLAEALM+
Sbjct: 84  LSALPFAGGGFNDAAIAEGLAEALMM 109


>ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
           [Vitis vinifera]
          Length = 827

 Score = 70.1 bits (170), Expect = 4e-09
 Identities = 39/86 (45%), Positives = 50/86 (58%)
 Frame = -3

Query: 521 HFCLRRLLGKQ*EH*YHSLPFSMFVDCLKLCLRLTINGVF*SSIGL*SGWTRDADVFLHW 342
           +FC   L G++       L   MF            +G + S +   SGWTRD D+FL W
Sbjct: 34  YFCGNELAGQKPSSSNFELSLVMF----------NAHGSYCSCLVQRSGWTRDVDLFLQW 83

Query: 341 LSAVPFSGGGFIDAAVGEGLAEALMV 264
           LSA+PF+GGGF DAA+ EGLAEALM+
Sbjct: 84  LSALPFAGGGFNDAAIAEGLAEALMM 109


Top