BLASTX nr result

ID: Papaver30_contig00038534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00038534
         (564 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010259556.1| PREDICTED: putative E3 ubiquitin-protein lig...    47   4e-10
ref|XP_010649586.1| PREDICTED: putative E3 ubiquitin-protein lig...    46   7e-10
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]    45   2e-09
ref|XP_010938388.1| PREDICTED: putative E3 ubiquitin-protein lig...    46   6e-07

>ref|XP_010259556.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Nelumbo
           nucifera]
          Length = 1406

 Score = 47.0 bits (110), Expect(2) = 4e-10
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
 Frame = -1

Query: 450 SLEDETQTLNPAGAHHRSPCKESS--SMPINSTSSKHSNLSEDGNCWTKFHNGTQLHPPH 277
           +L  ET  L+  G    SP +  S  SM   ST +++ +  E G     + +  +++P  
Sbjct: 285 TLYGETHKLH-WGCSVASPMENESRDSMYGKSTGTRYMDSIEHGTSRRIYQDLGKVYPLD 343

Query: 276 YHEHIIDETADTARASTLTAKQTSPPHERD---------EIYSRDTERSLQIKNIQDMLE 124
             EH IDE  D A  ST ++++ +   + D         EI  R+ + SL +K +QDMLE
Sbjct: 344 LQEHNIDEMVDKAMVSTFSSEKRNTHLQDDSRNLLKKLKEIGDREIKMSLGVKCLQDMLE 403

Query: 123 E--XXXXXXXXSLNDFPEEGDASEAELDDIQSSLRII 19
           E          S +D  EE D+ E ++D  + S RI+
Sbjct: 404 ESQSATPTSVYSFSDSDEESDSKE-KMDISEISDRIV 439



 Score = 43.9 bits (102), Expect(2) = 4e-10
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = -3

Query: 544 DKMMKQQARRYKSWLMYYQIMSYGESTKL 458
           D+  +Q ARRYK+WLMYYQ+  YGE+ KL
Sbjct: 265 DEATRQLARRYKNWLMYYQVTLYGETHKL 293


>ref|XP_010649586.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-2 isoform X1
           [Vitis vinifera]
          Length = 1356

 Score = 46.2 bits (108), Expect(2) = 7e-10
 Identities = 23/60 (38%), Positives = 33/60 (55%)
 Frame = -3

Query: 559 DNFSSDKMMKQQARRYKSWLMYYQIMSYGESTKLRRIPGRRNTNFKSCRSSPPITVQGKF 380
           D     + +++ A+RYKSWLMYYQ+M YGE+ +    PG  N        SP  ++ G F
Sbjct: 200 DEGKPGEAIRETAKRYKSWLMYYQVMQYGETPQR---PGGYNDILSPVDQSPYNSITGTF 256



 Score = 43.9 bits (102), Expect(2) = 7e-10
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
 Frame = -1

Query: 363 STSSKHSNLSEDGNCWTK-FHNGTQLHPPHYHEHIIDETADTARAS---TLTAKQTSPPH 196
           S+S+K S+    GN   + + N  ++HP    E IID T D A+AS   T         +
Sbjct: 273 SSSTKSSSSIAHGNTSLQTYRNFQKVHPLDPQESIIDSTGDKAKASRDNTEIQDYRKALN 332

Query: 195 ERDEIYSRDTERSLQIKNIQDMLEE--XXXXXXXXSLNDFPEEGDASEAELDDIQSSL 28
             D++  +D +RS  IK +QD+L E          S +D       SEA  D+ QSS+
Sbjct: 333 NSDQVSRQDIKRSSNIKCLQDILMESQSDTPTSDDSFDDNDSADGDSEAYADETQSSM 390


>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
          Length = 1378

 Score = 44.7 bits (104), Expect(2) = 2e-09
 Identities = 23/59 (38%), Positives = 32/59 (54%)
 Frame = -3

Query: 559 DNFSSDKMMKQQARRYKSWLMYYQIMSYGESTKLRRIPGRRNTNFKSCRSSPPITVQGK 383
           D     + +++ A+RYKSWLMYYQ+M YGE+ +    PG  N        SP  +  GK
Sbjct: 200 DEGKPGEAIRETAKRYKSWLMYYQVMQYGETPQR---PGGYNDILSPVDQSPYNSXYGK 255



 Score = 43.9 bits (102), Expect(2) = 2e-09
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
 Frame = -1

Query: 363 STSSKHSNLSEDGNCWTK-FHNGTQLHPPHYHEHIIDETADTARAS---TLTAKQTSPPH 196
           S+S+K S+    GN   + + N  ++HP    E IID T D A+AS   T         +
Sbjct: 256 SSSTKSSSSIAHGNTSLQTYRNFQKVHPLDPQESIIDSTGDKAKASRDNTEIQDYRKALN 315

Query: 195 ERDEIYSRDTERSLQIKNIQDMLEE--XXXXXXXXSLNDFPEEGDASEAELDDIQSSL 28
             D++  +D +RS  IK +QD+L E          S +D       SEA  D+ QSS+
Sbjct: 316 NSDQVSRQDIKRSSNIKCLQDILMESQSDTPTSDDSFDDNDSADGDSEAYADETQSSM 373


>ref|XP_010938388.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Elaeis
           guineensis]
          Length = 1382

 Score = 46.2 bits (108), Expect(2) = 6e-07
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = -3

Query: 544 DKMMKQQARRYKSWLMYYQIMSYGES 467
           D+  KQQ RRYK WLMYYQ++SYGE+
Sbjct: 237 DEAAKQQGRRYKDWLMYYQVVSYGET 262



 Score = 33.9 bits (76), Expect(2) = 6e-07
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
 Frame = -1

Query: 366 NSTSSKHSNLSEDGNCWTKFHNGTQLHPPHYHEHIIDETADTARASTLTAKQ-TSPPHER 190
           +S S++  N  E    W  F      +PP+  E+I  E    + A++   +  T P ++ 
Sbjct: 286 SSASTRCLNSLEQVPTWPSFQMAQMAYPPNSKENIEVEKIKASTANSEACEGFTKPKNDN 345

Query: 189 ------DEIYSRDTERSLQIKNIQDMLEE 121
                 DE +  +   S  I+ +QDMLEE
Sbjct: 346 SLLKNLDEGFHEEINESFDIRCLQDMLEE 374


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