BLASTX nr result
ID: Papaver30_contig00038368
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00038368
(2257 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002985109.1| hypothetical protein SELMODRAFT_121488 [Sela... 228 3e-62
ref|XP_002970788.1| hypothetical protein SELMODRAFT_94303 [Selag... 228 4e-62
ref|XP_010546323.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 227 2e-61
ref|XP_010546322.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 226 2e-61
gb|KQK23486.1| hypothetical protein BRADI_1g74120 [Brachypodium ... 223 5e-61
ref|XP_010229156.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 223 6e-61
ref|XP_008807898.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 226 7e-61
ref|XP_008807899.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 226 7e-61
ref|XP_008667755.1| PREDICTED: hypothetical protein isoform X1 [... 228 4e-60
ref|XP_008667757.1| PREDICTED: hypothetical protein isoform X2 [... 228 4e-60
gb|AIC82458.1| topoisomerase 3alpha [Cocos nucifera] 224 6e-60
ref|XP_010907414.1| PREDICTED: DNA topoisomerase 3-alpha [Elaeis... 224 1e-59
ref|XP_012081965.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 220 1e-59
ref|XP_012081967.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 220 1e-59
gb|KMZ73897.1| DNA topoisomerase [Zostera marina] 226 2e-59
ref|XP_002465810.1| hypothetical protein SORBIDRAFT_01g046210 [S... 224 2e-59
ref|XP_010025763.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 224 3e-59
ref|XP_010025764.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 224 3e-59
ref|XP_009355843.1| PREDICTED: DNA topoisomerase 3-alpha [Pyrus ... 221 5e-59
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric... 223 9e-59
>ref|XP_002985109.1| hypothetical protein SELMODRAFT_121488 [Selaginella moellendorffii]
gi|300147319|gb|EFJ13984.1| hypothetical protein
SELMODRAFT_121488 [Selaginella moellendorffii]
Length = 791
Score = 228 bits (582), Expect(2) = 3e-62
Identities = 164/496 (33%), Positives = 253/496 (51%), Gaps = 36/496 (7%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E V ++CL+VN L V R + I+ A + + N+SD
Sbjct: 113 VLWLDCDREGENIAYEVV-EVCLNVNRGLNVLRARFSAFIEREIQHAAQNLHRPNRNLSD 171
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSA--EIITGIVGDSISFGSCKTLLLNYAV-- 862
AV RQ+I +R+G S T+FQT L+K F E I +S+G C+ L + V
Sbjct: 172 AVDARQEIDLRIGASFTRFQTMLLKDRFVLPFDEHEKAI----LSYGPCQFPTLGFVVER 227
Query: 863 ----------NLWLEN---RTKTPKTSLRFIEGKHY-FKGVWTLFKTKVKHYVDTMINFY 1000
+ W N R++ S ++ G + + +++ V+ + T+ +
Sbjct: 228 YWQVQAHQPEDFWTINCVYRSENDSASFKWARGHLFDYVAAVAIYEMCVEEPLATV---F 284
Query: 1001 KCGGGYVSKC------RVGMIKNL*YFLRALSQD-------LYAGGLISYHRTKENLSDE 1141
G K V ++K FLR SQ+ LY G ISY RT+ + E
Sbjct: 285 SVTGRETRKNPPHPLNTVELVKRASRFLRLGSQETMKAAEELYQQGFISYPRTETDYFSE 344
Query: 1142 --ELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKN 1309
+L+R+V++Q HPVWG+YA L S + RH S G H PI P +F+ G E
Sbjct: 345 NTDLRRMVEEQTRHPVWGNYAHRLLDSRENLWRHPSNGGHDDKAHPPIHPTRFSDG-EPQ 403
Query: 1310 WRNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYE 1489
WRN+ K +++ + ++FLA +S+PA A + F++ G + + +L++Y YE
Sbjct: 404 WRNDH-KAVYELVVRHFLACVSQPAVGYATKAMIDIAGEQFSANGLMVTARNYLEVYRYE 462
Query: 1490 NLAGSELPRYEQKQD-CKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHI 1666
N A S LP ++ Q T T G P PP ++++DL++ MD+ GIGT AT+H HI
Sbjct: 463 NWAASTLPNFDLGQQFIPTRLTLDAGRTQP--PPLLSEADLIALMDKEGIGTDATMHDHI 520
Query: 1667 QGLIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERS 1846
+ L+D + T+D +T PT LG AL+ GY++M Y+ W LR M + M+A+ G +
Sbjct: 521 KKLLDRRYATKDAQT-RFCPTNLGEALVMGYDTMGYELWKPHLRSIMERDMKAVGDGIKV 579
Query: 1847 KNDVLNETLDNLKVWF 1894
K +VL L +K F
Sbjct: 580 KENVLETCLQQMKTCF 595
Score = 40.8 bits (94), Expect(2) = 3e-62
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +3
Query: 168 MAPRALIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVT 347
MA L VAEKP A+ +A+ LS+G+ + + + F Y+IG +P + +T
Sbjct: 1 MAVNVLNVAEKPSAAKEIAQILSHGDC----RSLSGHSVYNRIFHFNYMIGGQPCRMVMT 56
Query: 348 SANGHLEKMILKNQRGNLLNFYDRASVLIG--KDYVDLNAKRIAQRLKNEALDSQRLLLY 521
S +GHL ++ + Q + D A + + YV + I + L+ +A + Q L+L+
Sbjct: 57 SVSGHLMELDFEEQFRKWY-YCDPADLFQAPVRRYVPQDKLGIKRTLEEQARNCQWLVLW 115
>ref|XP_002970788.1| hypothetical protein SELMODRAFT_94303 [Selaginella moellendorffii]
gi|300161499|gb|EFJ28114.1| hypothetical protein
SELMODRAFT_94303 [Selaginella moellendorffii]
Length = 794
Score = 228 bits (581), Expect(2) = 4e-62
Identities = 164/496 (33%), Positives = 254/496 (51%), Gaps = 36/496 (7%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E V ++CL+VN L V R + I+ A + + N+SD
Sbjct: 113 VLWLDCDREGENIAYEVV-EVCLNVNRGLNVLRARFSAFIEREIQHAAQNLHRPNRNLSD 171
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSA--EIITGIVGDSISFGSCKTLLLNYAV-- 862
AV RQ+I +R+G S T+FQT L+K F E I +S+G C+ L + V
Sbjct: 172 AVDARQEIDLRIGASFTRFQTMLLKDRFVLPFDEHEKAI----LSYGPCQFPTLGFVVER 227
Query: 863 ----------NLWLEN---RTKTPKTSLRFIEGKHY-FKGVWTLFKTKVKHYVDTMINFY 1000
+ W N R++ S ++ G + + ++++ V+ + T+ +
Sbjct: 228 YWQVQAHQPEDFWTINCVYRSENDSASFKWTRGHLFDYVAAVSIYEMCVEEPLATV---F 284
Query: 1001 KCGGGYVSKC------RVGMIKNL*YFLRALSQD-------LYAGGLISYHRTKENLSDE 1141
G K V ++K FLR SQ+ LY G ISY RT+ + E
Sbjct: 285 SVTGRETRKNPPHPLNTVELVKRASRFLRFGSQETMKAAEELYQQGFISYPRTETDYFSE 344
Query: 1142 --ELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKN 1309
+L+R+V++Q HPVWG+YA L + RH S G H PI P +F+ G E
Sbjct: 345 NTDLRRMVEEQTRHPVWGNYAHRLVDPRENLWRHPSNGGHDDKAHPPIHPTRFSDG-EPQ 403
Query: 1310 WRNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYE 1489
WRN+ K +++ + ++FLA +S+PA A + F++ G + + +L++Y YE
Sbjct: 404 WRNDH-KAVYELVVRHFLACVSQPAVGYATKAMIDIAGEQFSANGLMVTARNYLEVYRYE 462
Query: 1490 NLAGSELPRYEQKQD-CKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHI 1666
N A S LP ++ Q T T G P PP ++++DL++ MD+ GIGT AT+H HI
Sbjct: 463 NWAASTLPNFDLGQQFIPTRLTLDAGRTQP--PPLLSEADLIALMDKEGIGTDATMHDHI 520
Query: 1667 QGLIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERS 1846
+ L+D + T+D +T PT LG AL+ GY++M Y+ W LR M + M+A+S G +
Sbjct: 521 KKLLDRRYATKDAQT-RFCPTNLGEALVMGYDTMGYELWKPHLRSIMERDMKAVSDGIKV 579
Query: 1847 KNDVLNETLDNLKVWF 1894
K +VL L +K F
Sbjct: 580 KENVLETCLQQMKTCF 595
Score = 40.8 bits (94), Expect(2) = 4e-62
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +3
Query: 168 MAPRALIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVT 347
MA L VAEKP A+ +A+ LS+G+ + + + F Y+IG +P + +T
Sbjct: 1 MAVNVLNVAEKPSAAKEIAQILSHGDC----RSLSGHSVYNRIFHFNYMIGGQPCRMVMT 56
Query: 348 SANGHLEKMILKNQRGNLLNFYDRASVLIG--KDYVDLNAKRIAQRLKNEALDSQRLLLY 521
S +GHL ++ + Q + D A + + YV + I + L+ +A + Q L+L+
Sbjct: 57 SVSGHLMELDFEEQFRKWY-YCDPADLFQAPVRRYVPQDKLGIKRTLEEQARNCQWLVLW 115
>ref|XP_010546323.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Tarenaya
hassleriana]
Length = 906
Score = 227 bits (578), Expect(2) = 2e-61
Identities = 171/540 (31%), Positives = 263/540 (48%), Gaps = 37/540 (6%)
Frame = +2
Query: 461 KEDCTKIEK*SFRFSTSALIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDD 640
K+D K + R S ++WLD D EGENI E + ++C +V NL++ R H L D
Sbjct: 101 KKDIKKTLEEEARRSDWLVLWLDCDREGENIAFEVI-EVCRAVRHNLVIRRAHFSALIDR 159
Query: 641 SIKAAMLKFFKIDTNMSDAVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS- 817
I A+ + + AV RQ+I +R+G S T+FQT L++ FS + GD
Sbjct: 160 EIHEAVQNLRDPNQLFAHAVDARQEIDLRIGASFTRFQTMLLRDRFSIDSM-----GDER 214
Query: 818 ---ISFGSCKTLLLNYAVNLWLENRTKTPKT------SLRFIEGKHYFK----------G 940
IS+G C+ L + V + E + P+ S R EG F
Sbjct: 215 SSVISYGPCQFPTLGFVVERYWEIQAHEPEEYWTINCSHRSEEGLATFNWMRGHLFDYAA 274
Query: 941 VWTLFKTKVKHYVDTMINF-----------YKCGGGYVSKCRVGMIKNL*YFLRALSQDL 1087
L++ V+ T++N Y + K + +++DL
Sbjct: 275 AAILYEMCVEEPTATVMNVPQPRERFKYPPYPLNTIELEKRASRYFRMSSEQTMKVAEDL 334
Query: 1088 YAGGLISYHRTKENL--SDEELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP 1261
Y G SY RT+ + S +L+ IVD+QV HP WG YA L + R+ G
Sbjct: 335 YQAGYTSYPRTETDSFSSRTDLRAIVDEQVRHPAWGSYAQRLLNPEEGLWRNPGNGGHDD 394
Query: 1262 --HTPIVPIKFTAGSEKNWRNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFT 1435
H PI P KF++G E NW + +++ + ++FLA +S+PA E+ F+
Sbjct: 395 KAHPPIHPTKFSSG-ESNWSRDHLN-VYELVVRHFLACVSQPAVGAETTVEIDIAGERFS 452
Query: 1436 SKGEKIITKGFLDIYNYENLAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLS 1615
+ G I+ K +LD+Y +E+ GS +P+YE+ Q T ++ S + PP ++++DLLS
Sbjct: 453 ASGRAILAKNYLDVYRFESWGGSVIPKYERGQQF-IPTTLTLDSAVTRPPPLLSEADLLS 511
Query: 1616 FMDRMGIGTPATVHTHIQGLIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDL 1795
MD+ GIGT AT+H HI+ L+D T+D T PT LG AL+ GY+ M Y+ W +L
Sbjct: 512 CMDKAGIGTDATMHDHIKKLLDRGYATKDTNT-RFCPTNLGEALVMGYDDMGYELWKPNL 570
Query: 1796 RDYMVQGMRAISSGERSKNDVLNETLDNLKVWF--RRILKGQLEIVRGVRTFLRTFLSNE 1969
R M M +S G+++K +VL L +K F R+ K +L G+ F R+ +NE
Sbjct: 571 RAIMEHDMNEVSVGQKTKAEVLETCLQQMKACFLDARVKKTKLLEAMGI-FFDRSNRTNE 629
Score = 39.7 bits (91), Expect(2) = 2e-61
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = +3
Query: 183 LIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTSANGH 362
L VAEKP VA+ VA LS GN+ + + +F YVI +P + +TS GH
Sbjct: 12 LNVAEKPSVAKSVAGILSRGNFRTREGRSRYNKI----FEFDYVINGQPCRMHMTSVTGH 67
Query: 363 LEKM 374
L ++
Sbjct: 68 LMEL 71
>ref|XP_010546322.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Tarenaya
hassleriana]
Length = 930
Score = 226 bits (577), Expect(2) = 2e-61
Identities = 167/529 (31%), Positives = 257/529 (48%), Gaps = 37/529 (6%)
Frame = +2
Query: 461 KEDCTKIEK*SFRFSTSALIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDD 640
K+D K + R S ++WLD D EGENI E + ++C +V NL++ R H L D
Sbjct: 101 KKDIKKTLEEEARRSDWLVLWLDCDREGENIAFEVI-EVCRAVRHNLVIRRAHFSALIDR 159
Query: 641 SIKAAMLKFFKIDTNMSDAVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS- 817
I A+ + + AV RQ+I +R+G S T+FQT L++ FS + GD
Sbjct: 160 EIHEAVQNLRDPNQLFAHAVDARQEIDLRIGASFTRFQTMLLRDRFSIDSM-----GDER 214
Query: 818 ---ISFGSCKTLLLNYAVNLWLENRTKTPKT------SLRFIEGKHYFK----------G 940
IS+G C+ L + V + E + P+ S R EG F
Sbjct: 215 SSVISYGPCQFPTLGFVVERYWEIQAHEPEEYWTINCSHRSEEGLATFNWMRGHLFDYAA 274
Query: 941 VWTLFKTKVKHYVDTMINF-----------YKCGGGYVSKCRVGMIKNL*YFLRALSQDL 1087
L++ V+ T++N Y + K + +++DL
Sbjct: 275 AAILYEMCVEEPTATVMNVPQPRERFKYPPYPLNTIELEKRASRYFRMSSEQTMKVAEDL 334
Query: 1088 YAGGLISYHRTKENL--SDEELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP 1261
Y G SY RT+ + S +L+ IVD+QV HP WG YA L + R+ G
Sbjct: 335 YQAGYTSYPRTETDSFSSRTDLRAIVDEQVRHPAWGSYAQRLLNPEEGLWRNPGNGGHDD 394
Query: 1262 --HTPIVPIKFTAGSEKNWRNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFT 1435
H PI P KF++G E NW + +++ + ++FLA +S+PA E+ F+
Sbjct: 395 KAHPPIHPTKFSSG-ESNWSRDHLN-VYELVVRHFLACVSQPAVGAETTVEIDIAGERFS 452
Query: 1436 SKGEKIITKGFLDIYNYENLAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLS 1615
+ G I+ K +LD+Y +E+ GS +P+YE+ Q T ++ S + PP ++++DLLS
Sbjct: 453 ASGRAILAKNYLDVYRFESWGGSVIPKYERGQQF-IPTTLTLDSAVTRPPPLLSEADLLS 511
Query: 1616 FMDRMGIGTPATVHTHIQGLIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDL 1795
MD+ GIGT AT+H HI+ L+D T+D T PT LG AL+ GY+ M Y+ W +L
Sbjct: 512 CMDKAGIGTDATMHDHIKKLLDRGYATKDTNT-RFCPTNLGEALVMGYDDMGYELWKPNL 570
Query: 1796 RDYMVQGMRAISSGERSKNDVLNETLDNLKVWF--RRILKGQLEIVRGV 1936
R M M +S G+++K +VL L +K F R+ K +L G+
Sbjct: 571 RAIMEHDMNEVSVGQKTKAEVLETCLQQMKACFLDARVKKTKLLEAMGI 619
Score = 39.7 bits (91), Expect(2) = 2e-61
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = +3
Query: 183 LIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTSANGH 362
L VAEKP VA+ VA LS GN+ + + +F YVI +P + +TS GH
Sbjct: 12 LNVAEKPSVAKSVAGILSRGNFRTREGRSRYNKI----FEFDYVINGQPCRMHMTSVTGH 67
Query: 363 LEKM 374
L ++
Sbjct: 68 LMEL 71
>gb|KQK23486.1| hypothetical protein BRADI_1g74120 [Brachypodium distachyon]
Length = 1060
Score = 223 bits (569), Expect(2) = 5e-61
Identities = 163/516 (31%), Positives = 254/516 (49%), Gaps = 39/516 (7%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E V +IC VN L + R L D I A+ + + +D
Sbjct: 212 VLWLDCDREGENIAYEVV-EICAGVNHCLNIWRARFSALIDREIHEAVQHLGRPNKLFAD 270
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS----ISFGSCKTLLLNYAV 862
AV RQ+I +R+G S T+FQT L+K F + + G+ +S+G C+ L + V
Sbjct: 271 AVDARQEIDLRIGASFTRFQTMLLKDAF-----VLDVSGEERNMVLSYGPCQFPTLGFIV 325
Query: 863 NLWLENRTKTPK---------------TSLRFIEGKHY-FKGVWTLFKTKVKHYVDTMIN 994
+ E + P+ S +I G + + +++ V+ + T+ N
Sbjct: 326 ERFWEIQAHEPEEFWTINCSHTSDEGTASFGWIRGHLFDYSSAIVIYEMCVQEPMATVQN 385
Query: 995 F----------YKCGGGYVSK-----CRVGMIKNL*YFLRALSQDLYAGGLISYHRTK-E 1126
Y + K CR+ + ++++LY G ISY RT+ +
Sbjct: 386 VRNQEKLKYPPYPLSTLELQKRASRCCRMSSEHTM-----KVAEELYQAGFISYPRTETD 440
Query: 1127 NLS-DEELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAG 1297
N S + +L I +QV HPVWG YA L ++ R+ S G H PI P KFTAG
Sbjct: 441 NFSPNTDLHAIAHEQVPHPVWGSYAQRLLNPEERLWRNPSNGGHDDKAHPPIHPTKFTAG 500
Query: 1298 SEKNWRNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDI 1477
E NW +++ K+++ + ++FLA S+PA E+ F + G ++ K +LD+
Sbjct: 501 -ESNW-SQDHHKVYELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDV 558
Query: 1478 YNYENLAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVH 1657
Y Y++ GS LP Y Q T ++ S + PP + ++DLLS MD+ GIGT AT+H
Sbjct: 559 YRYDSWGGSLLPTYTIGQQF-VPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMH 617
Query: 1658 THIQGLIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSG 1837
HI+ L+D T+D + PT LG AL+ GY+ M Y+ W LR M M+A+S G
Sbjct: 618 EHIKKLLDRCYATKDANS-RFSPTNLGEALVMGYDEMGYELWKPYLRAMMEADMKAVSIG 676
Query: 1838 ERSKNDVLNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
+SK +VL L +K F +++++ + TF
Sbjct: 677 TKSKLEVLEGCLQQMKACFLDARSNKVKLLDAMGTF 712
Score = 41.6 bits (96), Expect(2) = 5e-61
Identities = 36/115 (31%), Positives = 51/115 (44%)
Frame = +3
Query: 171 APRALIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTS 350
A R L VAEKP VA+ VA LS ++P + +F Y IG + + VTS
Sbjct: 101 AIRVLNVAEKPSVAKSVAEILSRRAMQSRPGRSRYNRI----FEFNYAIGGQACHMLVTS 156
Query: 351 ANGHLEKMILKNQRGNLLNFYDRASVLIGKDYVDLNAKRIAQRLKNEALDSQRLL 515
GHL + L+F DR D V+L + + + + LD +R L
Sbjct: 157 VTGHLME----------LDFDDRYRRWYSCDPVELFHAPVRKAVPQDKLDIKRTL 201
>ref|XP_010229156.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Brachypodium
distachyon]
Length = 969
Score = 223 bits (569), Expect(2) = 6e-61
Identities = 163/516 (31%), Positives = 254/516 (49%), Gaps = 39/516 (7%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E V +IC VN L + R L D I A+ + + +D
Sbjct: 121 VLWLDCDREGENIAYEVV-EICAGVNHCLNIWRARFSALIDREIHEAVQHLGRPNKLFAD 179
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS----ISFGSCKTLLLNYAV 862
AV RQ+I +R+G S T+FQT L+K F + + G+ +S+G C+ L + V
Sbjct: 180 AVDARQEIDLRIGASFTRFQTMLLKDAF-----VLDVSGEERNMVLSYGPCQFPTLGFIV 234
Query: 863 NLWLENRTKTPK---------------TSLRFIEGKHY-FKGVWTLFKTKVKHYVDTMIN 994
+ E + P+ S +I G + + +++ V+ + T+ N
Sbjct: 235 ERFWEIQAHEPEEFWTINCSHTSDEGTASFGWIRGHLFDYSSAIVIYEMCVQEPMATVQN 294
Query: 995 F----------YKCGGGYVSK-----CRVGMIKNL*YFLRALSQDLYAGGLISYHRTK-E 1126
Y + K CR+ + ++++LY G ISY RT+ +
Sbjct: 295 VRNQEKLKYPPYPLSTLELQKRASRCCRMSSEHTM-----KVAEELYQAGFISYPRTETD 349
Query: 1127 NLS-DEELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAG 1297
N S + +L I +QV HPVWG YA L ++ R+ S G H PI P KFTAG
Sbjct: 350 NFSPNTDLHAIAHEQVPHPVWGSYAQRLLNPEERLWRNPSNGGHDDKAHPPIHPTKFTAG 409
Query: 1298 SEKNWRNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDI 1477
E NW +++ K+++ + ++FLA S+PA E+ F + G ++ K +LD+
Sbjct: 410 -ESNW-SQDHHKVYELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDV 467
Query: 1478 YNYENLAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVH 1657
Y Y++ GS LP Y Q T ++ S + PP + ++DLLS MD+ GIGT AT+H
Sbjct: 468 YRYDSWGGSLLPTYTIGQQF-VPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMH 526
Query: 1658 THIQGLIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSG 1837
HI+ L+D T+D + PT LG AL+ GY+ M Y+ W LR M M+A+S G
Sbjct: 527 EHIKKLLDRCYATKDANS-RFSPTNLGEALVMGYDEMGYELWKPYLRAMMEADMKAVSIG 585
Query: 1838 ERSKNDVLNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
+SK +VL L +K F +++++ + TF
Sbjct: 586 TKSKLEVLEGCLQQMKACFLDARSNKVKLLDAMGTF 621
Score = 41.6 bits (96), Expect(2) = 6e-61
Identities = 36/115 (31%), Positives = 51/115 (44%)
Frame = +3
Query: 171 APRALIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTS 350
A R L VAEKP VA+ VA LS ++P + +F Y IG + + VTS
Sbjct: 10 AIRVLNVAEKPSVAKSVAEILSRRAMQSRPGRSRYNRI----FEFNYAIGGQACHMLVTS 65
Query: 351 ANGHLEKMILKNQRGNLLNFYDRASVLIGKDYVDLNAKRIAQRLKNEALDSQRLL 515
GHL + L+F DR D V+L + + + + LD +R L
Sbjct: 66 VTGHLME----------LDFDDRYRRWYSCDPVELFHAPVRKAVPQDKLDIKRTL 110
>ref|XP_008807898.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Phoenix dactylifera]
Length = 920
Score = 226 bits (577), Expect(2) = 7e-61
Identities = 158/511 (30%), Positives = 252/511 (49%), Gaps = 34/511 (6%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E V ++C S+N L V R H L D I A+ + + +D
Sbjct: 122 VLWLDCDREGENIAFE-VMEVCTSINHRLNVWRAHFSALIDREIHEAVQNLGRPNKLFAD 180
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS----ISFGSCKTLLLNYAV 862
AV RQ+I +R+G S T+FQT L++ F + GD +S+G C+ L + V
Sbjct: 181 AVDVRQEIDLRIGASFTRFQTMLLRDAF-----VLDFAGDDRNVVLSYGPCQFPTLGFIV 235
Query: 863 NLWLENRTKTPK---------------TSLRFIEGKHY-FKGVWTLFKTKVKHYVDTMIN 994
+ E ++ P+ T+ ++ G + + +++ V+ T++N
Sbjct: 236 ERYWEIQSHEPEEFWTINCSHTSDEGTTTFSWMRGHLFDYTSAVIVYEMCVEESTATVMN 295
Query: 995 F----------YKCGGGYVSKCRVGMIKNL*YFLRALSQDLYAGGLISYHRTKENLS--D 1138
Y + K + ++++LY G ISY RT+ + +
Sbjct: 296 VRNQEKLKYPPYPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGYISYPRTETDSFSVN 355
Query: 1139 EELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKNW 1312
+L IV +QVGHP WG YA L + R+ S G H PI P KF+AG E W
Sbjct: 356 TDLHAIVGEQVGHPAWGSYAQRLLDPEASLWRNPSNGGHNDKAHPPIHPTKFSAG-EPGW 414
Query: 1313 RNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYEN 1492
+++ +L++ + ++FLA +SKPA E+ F++ G II K +LD+Y +E+
Sbjct: 415 -SQDHNRLYELVVRHFLACVSKPAVGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFES 473
Query: 1493 LAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHIQG 1672
G+ LP Y Q T ++ S + P ++++DLLS MD+ GIGT AT+H HI+
Sbjct: 474 WGGTILPTYTIGQQF-IPTTLTLDSGVTRPPQLLSEADLLSCMDKAGIGTDATMHDHIKK 532
Query: 1673 LIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERSKN 1852
L+D T+D +T PT LG AL+ GY+ M Y+ W LR M M+A+S G + K+
Sbjct: 533 LLDRCYATKDSDT-RFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSIGSKRKS 591
Query: 1853 DVLNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
+VL L +K F ++++ + F
Sbjct: 592 EVLEGCLQQMKACFLDARLNRVKLFEAMELF 622
Score = 38.1 bits (87), Expect(2) = 7e-61
Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +3
Query: 177 RALIVAEKPEVAEFVARSLS--NGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTS 350
R L VAEKP VA+ VA LS G + ++ VF +F Y IG + + VTS
Sbjct: 11 RVLNVAEKPSVAKAVAEILSRRGGGFRSREGRSRYNR---VF-EFEYAIGPQLCHMLVTS 66
Query: 351 ANGHLEKMILKNQRGNLLNFYDRASVLIGKDYVDLNAKRIAQRLKNEALDSQRLL 515
GHL + L F DR D DL + + + + LD +R L
Sbjct: 67 VTGHLME----------LEFDDRFRKWHSCDPADLYHAAVRKHVPQDKLDIKRTL 111
>ref|XP_008807899.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Phoenix dactylifera]
Length = 917
Score = 226 bits (577), Expect(2) = 7e-61
Identities = 158/511 (30%), Positives = 252/511 (49%), Gaps = 34/511 (6%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E V ++C S+N L V R H L D I A+ + + +D
Sbjct: 122 VLWLDCDREGENIAFE-VMEVCTSINHRLNVWRAHFSALIDREIHEAVQNLGRPNKLFAD 180
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS----ISFGSCKTLLLNYAV 862
AV RQ+I +R+G S T+FQT L++ F + GD +S+G C+ L + V
Sbjct: 181 AVDVRQEIDLRIGASFTRFQTMLLRDAF-----VLDFAGDDRNVVLSYGPCQFPTLGFIV 235
Query: 863 NLWLENRTKTPK---------------TSLRFIEGKHY-FKGVWTLFKTKVKHYVDTMIN 994
+ E ++ P+ T+ ++ G + + +++ V+ T++N
Sbjct: 236 ERYWEIQSHEPEEFWTINCSHTSDEGTTTFSWMRGHLFDYTSAVIVYEMCVEESTATVMN 295
Query: 995 F----------YKCGGGYVSKCRVGMIKNL*YFLRALSQDLYAGGLISYHRTKENLS--D 1138
Y + K + ++++LY G ISY RT+ + +
Sbjct: 296 VRNQEKLKYPPYPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGYISYPRTETDSFSVN 355
Query: 1139 EELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKNW 1312
+L IV +QVGHP WG YA L + R+ S G H PI P KF+AG E W
Sbjct: 356 TDLHAIVGEQVGHPAWGSYAQRLLDPEASLWRNPSNGGHNDKAHPPIHPTKFSAG-EPGW 414
Query: 1313 RNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYEN 1492
+++ +L++ + ++FLA +SKPA E+ F++ G II K +LD+Y +E+
Sbjct: 415 -SQDHNRLYELVVRHFLACVSKPAVGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFES 473
Query: 1493 LAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHIQG 1672
G+ LP Y Q T ++ S + P ++++DLLS MD+ GIGT AT+H HI+
Sbjct: 474 WGGTILPTYTIGQQF-IPTTLTLDSGVTRPPQLLSEADLLSCMDKAGIGTDATMHDHIKK 532
Query: 1673 LIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERSKN 1852
L+D T+D +T PT LG AL+ GY+ M Y+ W LR M M+A+S G + K+
Sbjct: 533 LLDRCYATKDSDT-RFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSIGSKRKS 591
Query: 1853 DVLNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
+VL L +K F ++++ + F
Sbjct: 592 EVLEGCLQQMKACFLDARLNRVKLFEAMELF 622
Score = 38.1 bits (87), Expect(2) = 7e-61
Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +3
Query: 177 RALIVAEKPEVAEFVARSLS--NGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTS 350
R L VAEKP VA+ VA LS G + ++ VF +F Y IG + + VTS
Sbjct: 11 RVLNVAEKPSVAKAVAEILSRRGGGFRSREGRSRYNR---VF-EFEYAIGPQLCHMLVTS 66
Query: 351 ANGHLEKMILKNQRGNLLNFYDRASVLIGKDYVDLNAKRIAQRLKNEALDSQRLL 515
GHL + L F DR D DL + + + + LD +R L
Sbjct: 67 VTGHLME----------LEFDDRFRKWHSCDPADLYHAAVRKHVPQDKLDIKRTL 111
>ref|XP_008667755.1| PREDICTED: hypothetical protein isoform X1 [Zea mays]
gi|414864981|tpg|DAA43538.1| TPA: hypothetical protein
ZEAMMB73_751776 [Zea mays]
Length = 915
Score = 228 bits (582), Expect(2) = 4e-60
Identities = 169/524 (32%), Positives = 256/524 (48%), Gaps = 37/524 (7%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E ++ +C NS+L + R L D I ++ + + +D
Sbjct: 119 VLWLDCDREGENIAYEVID-VCTRANSHLNIWRARFSALIDREIHESVQHLGRPNKLFAD 177
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS----ISFGSCKTLLLNYAV 862
AV RQ+I +R+G S T+FQT L+K F + + GD +S+G C+ L + V
Sbjct: 178 AVDARQEIDLRIGASFTRFQTMLLKDAF-----VIDVTGDERSLVLSYGPCQFPTLGFIV 232
Query: 863 NLWLENRTKTPK---------------TSLRFIEGKHYFK-----GVWTLFKTKVKHYVD 982
+ E + P+ S +I G H F ++ + ++ V
Sbjct: 233 ERFWEIQAHEPEEFWTINCTHTSDEGTASFGWIRG-HLFDYSCAISIYEMCVSEPMATVQ 291
Query: 983 TMINFYKCGGGYVSKCRVGMIKNL*YFLRALSQ-------DLYAGGLISYHRTK-ENLS- 1135
+ N K V + K + R S+ +LY G ISY RT+ +N S
Sbjct: 292 NVRNQEKLKYPPYPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSP 351
Query: 1136 DEELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKN 1309
+ +L IV +QV HPVWG YA L ++ R+ S G H PI P KF+ G E+N
Sbjct: 352 NTDLHAIVREQVNHPVWGAYAQRLLNPEARLWRNPSNGGHDDKAHPPIHPTKFSEG-ERN 410
Query: 1310 WRNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYE 1489
W + T+ L++F+ ++FLA S+PA E+ F + G I+ K +LD+Y ++
Sbjct: 411 WSPDHTR-LYEFVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVILAKNYLDVYRFD 469
Query: 1490 NLAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHIQ 1669
+ G+ LP Y Q T ++ S + PP + ++DLLS MD+ GIGT AT+H HI+
Sbjct: 470 SWGGTLLPTYNIGQQF-VPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIK 528
Query: 1670 GLIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERSK 1849
L+D T+D T PT LG AL+ GY+ M Y+ W LR M M+++S G +SK
Sbjct: 529 KLLDRCYATKDENT-RFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSVGTKSK 587
Query: 1850 NDVLNETLDNLKVWF--RRILKGQLEIVRGVRTFLRTFLSNETQ 1975
++VL L +K F R+ K +L G NETQ
Sbjct: 588 SEVLESCLQQMKACFLDARVKKAKLLDAMGTFFARSNRPINETQ 631
Score = 33.9 bits (76), Expect(2) = 4e-60
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 APRALIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTS 350
A R L VAEKP VA+ VA LS + ++ + +F Y I + VTS
Sbjct: 8 AIRVLNVAEKPSVAKAVAEILSRRSAQSRAGRSQYNRI----FEFNYAINGRACHMLVTS 63
Query: 351 ANGHLEKMILKNQRGNLLNFYDRASVLIG--KDYVDLNAKRIAQRLKNEALDSQRLLLY 521
GHL ++ + R + D A + + V + + I Q L+ EA Q L+L+
Sbjct: 64 VTGHLMELEF-DDRFRRWHSCDPAELFHAPVRKSVPQDKQAIKQTLEEEARRCQWLVLW 121
>ref|XP_008667757.1| PREDICTED: hypothetical protein isoform X2 [Zea mays]
Length = 913
Score = 228 bits (582), Expect(2) = 4e-60
Identities = 169/524 (32%), Positives = 256/524 (48%), Gaps = 37/524 (7%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E ++ +C NS+L + R L D I ++ + + +D
Sbjct: 119 VLWLDCDREGENIAYEVID-VCTRANSHLNIWRARFSALIDREIHESVQHLGRPNKLFAD 177
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS----ISFGSCKTLLLNYAV 862
AV RQ+I +R+G S T+FQT L+K F + + GD +S+G C+ L + V
Sbjct: 178 AVDARQEIDLRIGASFTRFQTMLLKDAF-----VIDVTGDERSLVLSYGPCQFPTLGFIV 232
Query: 863 NLWLENRTKTPK---------------TSLRFIEGKHYFK-----GVWTLFKTKVKHYVD 982
+ E + P+ S +I G H F ++ + ++ V
Sbjct: 233 ERFWEIQAHEPEEFWTINCTHTSDEGTASFGWIRG-HLFDYSCAISIYEMCVSEPMATVQ 291
Query: 983 TMINFYKCGGGYVSKCRVGMIKNL*YFLRALSQ-------DLYAGGLISYHRTK-ENLS- 1135
+ N K V + K + R S+ +LY G ISY RT+ +N S
Sbjct: 292 NVRNQEKLKYPPYPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSP 351
Query: 1136 DEELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKN 1309
+ +L IV +QV HPVWG YA L ++ R+ S G H PI P KF+ G E+N
Sbjct: 352 NTDLHAIVREQVNHPVWGAYAQRLLNPEARLWRNPSNGGHDDKAHPPIHPTKFSEG-ERN 410
Query: 1310 WRNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYE 1489
W + T+ L++F+ ++FLA S+PA E+ F + G I+ K +LD+Y ++
Sbjct: 411 WSPDHTR-LYEFVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVILAKNYLDVYRFD 469
Query: 1490 NLAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHIQ 1669
+ G+ LP Y Q T ++ S + PP + ++DLLS MD+ GIGT AT+H HI+
Sbjct: 470 SWGGTLLPTYNIGQQF-VPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIK 528
Query: 1670 GLIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERSK 1849
L+D T+D T PT LG AL+ GY+ M Y+ W LR M M+++S G +SK
Sbjct: 529 KLLDRCYATKDENT-RFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSVGTKSK 587
Query: 1850 NDVLNETLDNLKVWF--RRILKGQLEIVRGVRTFLRTFLSNETQ 1975
++VL L +K F R+ K +L G NETQ
Sbjct: 588 SEVLESCLQQMKACFLDARVKKAKLLDAMGTFFARSNRPINETQ 631
Score = 33.9 bits (76), Expect(2) = 4e-60
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 APRALIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTS 350
A R L VAEKP VA+ VA LS + ++ + +F Y I + VTS
Sbjct: 8 AIRVLNVAEKPSVAKAVAEILSRRSAQSRAGRSQYNRI----FEFNYAINGRACHMLVTS 63
Query: 351 ANGHLEKMILKNQRGNLLNFYDRASVLIG--KDYVDLNAKRIAQRLKNEALDSQRLLLY 521
GHL ++ + R + D A + + V + + I Q L+ EA Q L+L+
Sbjct: 64 VTGHLMELEF-DDRFRRWHSCDPAELFHAPVRKSVPQDKQAIKQTLEEEARRCQWLVLW 121
>gb|AIC82458.1| topoisomerase 3alpha [Cocos nucifera]
Length = 916
Score = 224 bits (571), Expect(2) = 6e-60
Identities = 156/511 (30%), Positives = 252/511 (49%), Gaps = 34/511 (6%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E V ++C S+N L V R H L + I+ A+ + + +D
Sbjct: 122 VLWLDCDREGENIAFEVV-EVCTSINHRLNVWRAHFSALIEREIREAVQNLGRPNKLFAD 180
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS----ISFGSCKTLLLNYAV 862
AV RQ+I +R+G S T+FQT L++ F + GD +S+G C+ L + V
Sbjct: 181 AVDVRQEIDLRIGASFTRFQTMLLRDAF-----VLDFAGDDRNVVLSYGPCQFPTLGFIV 235
Query: 863 NLWLENRTKTPK---------------TSLRFIEGKHY-FKGVWTLFKTKVKHYVDTMIN 994
+ E ++ P+ + ++ G + + +++ V+ T++N
Sbjct: 236 ERYWEIQSHEPEEFWTINCSHTSDEGTAAFSWMRGHLFDYTSAVIVYEMCVEEPTATVMN 295
Query: 995 F----------YKCGGGYVSKCRVGMIKNL*YFLRALSQDLYAGGLISYHRTKENLSDE- 1141
Y + K + ++++LY G ISY RT+ + E
Sbjct: 296 VRNQEKLKYPPYPLNTVELQKRASRYFRMSSEHTMKVAEELYQAGYISYPRTETDKFSEN 355
Query: 1142 -ELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKNW 1312
+L IV +QVGHP WG YA L ++ R+ G H PI P KF+AG E W
Sbjct: 356 TDLHAIVGEQVGHPAWGSYAQRLLDPEARLWRNPGNGGHDDKAHPPIHPTKFSAG-EPRW 414
Query: 1313 RNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYEN 1492
+++ +L++ + ++FLA +S+PA E+ F++ G II K +LD+Y +E+
Sbjct: 415 -SQDHNRLYELVVRHFLACVSQPAVGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFES 473
Query: 1493 LAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHIQG 1672
G+ LP Y Q T ++ S + PP ++++DLLS MD+ GIGT AT+H HI+
Sbjct: 474 WGGTILPTYTIGQQF-VPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKK 532
Query: 1673 LIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERSKN 1852
L+D T+D T PT LG AL+ GY+ M Y+ W LR M M+A+S G + K
Sbjct: 533 LLDRCYATKDSNT-RFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSMGTKRKF 591
Query: 1853 DVLNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
+VL L +K F +++++ + F
Sbjct: 592 EVLEGCLQQMKACFLDAKLNRVKLLEAMGLF 622
Score = 37.4 bits (85), Expect(2) = 6e-60
Identities = 36/113 (31%), Positives = 49/113 (43%)
Frame = +3
Query: 177 RALIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTSAN 356
R L VAEKP VA+ V+ LS G + + VF +F Y IG + VTS
Sbjct: 11 RVLNVAEKPSVAKAVSEILSRGGGGFRSR-EGRSRYNRVF-EFEYAIGPHLCHMLVTSVT 68
Query: 357 GHLEKMILKNQRGNLLNFYDRASVLIGKDYVDLNAKRIAQRLKNEALDSQRLL 515
GHL + L+F DR D DL + + + + LD +R L
Sbjct: 69 GHLME----------LDFDDRFRKWHSCDPADLYDAPVRKYVPQDKLDIKRTL 111
>ref|XP_010907414.1| PREDICTED: DNA topoisomerase 3-alpha [Elaeis guineensis]
Length = 917
Score = 224 bits (570), Expect(2) = 1e-59
Identities = 165/511 (32%), Positives = 252/511 (49%), Gaps = 34/511 (6%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E V ++C S+N L V R H L D I A+ + + +D
Sbjct: 122 VLWLDCDREGENIAFE-VMEVCTSINHRLNVWRAHFSALIDREIHEAVQNLGRPNKLFAD 180
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS----ISFGSCKTLLLNYAV 862
AV RQ+I +R+G S T+FQT L++ F + GD +S+G C+ L + V
Sbjct: 181 AVDARQEIDLRIGASFTRFQTMLLRDAF-----VLDFAGDDRNVVLSYGPCQFPTLGFIV 235
Query: 863 NLWLENRTKTPK---------TSLRFIEGKHYFKGVWTLFKTKVKHY----------VDT 985
+ E ++ P+ TS + +G + + V Y V T
Sbjct: 236 ERYWEIQSHEPEEFWTINCSHTSDEGTAAFSWMRGHLFDYTSAVIAYEMCVEEPTATVMT 295
Query: 986 MINFYKCGGGYVSKCRVGMIKNL*YFLRA-------LSQDLYAGGLISYHRTK-ENLS-D 1138
+ N K V + K + R ++++LY G ISY RT+ +N S +
Sbjct: 296 VRNQEKLKYPPYPLSTVELQKRASRYFRMSAEHTMKVAEELYQAGYISYPRTETDNFSAN 355
Query: 1139 EELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKNW 1312
+L IV +QVGHP WG YA L ++ R+ S G H PI P KF AG E W
Sbjct: 356 TDLHAIVGEQVGHPAWGSYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFFAG-EPGW 414
Query: 1313 RNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYEN 1492
++ +L++ + ++FLA +S+PA E+ F + G II K +LD+Y +E+
Sbjct: 415 -SQNHNRLYELVVRHFLACVSQPAVGAETTVEIDIAGEQFFASGRVIIAKNYLDVYRFES 473
Query: 1493 LAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHIQG 1672
G+ LP Y Q T ++ S + PP ++++DLLS MD+ GIGT AT+H HI+
Sbjct: 474 WGGTILPTYTIGQQF-IPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKK 532
Query: 1673 LIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERSKN 1852
L+D T+D T PT LG AL+ GY+ M Y+ W LR M M+A+S G + K+
Sbjct: 533 LLDRCYATKDSNT-RFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSLGAKRKS 591
Query: 1853 DVLNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
+VL L +K F +++++ + F
Sbjct: 592 EVLEGCLQQMKACFLDARLNRVKLLEAMGLF 622
Score = 37.0 bits (84), Expect(2) = 1e-59
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = +3
Query: 177 RALIVAEKPEVAEFVARSLSN--GNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTS 350
R L VAEKP VA+ V+ LS G + ++ VF+ F Y IG + + VTS
Sbjct: 11 RVLNVAEKPSVAKAVSEILSRRGGGFRSREGRSRYNR---VFE-FEYAIGPQLCHMLVTS 66
Query: 351 ANGHLEKMILKNQRGNLLNFYDRASVLIGKDYVDLNAKRIAQRLKNEALDSQRLL 515
GHL + L+F DR D DL + + + + LD +R L
Sbjct: 67 VTGHLME----------LDFDDRFRKWHSCDPADLYDAPVRKNVPQDKLDIKRTL 111
>ref|XP_012081965.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Jatropha curcas]
gi|802678385|ref|XP_012081966.1| PREDICTED: DNA
topoisomerase 3-alpha isoform X1 [Jatropha curcas]
Length = 912
Score = 220 bits (560), Expect(2) = 1e-59
Identities = 157/509 (30%), Positives = 252/509 (49%), Gaps = 32/509 (6%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E V ++C + N L V R L D I A+ + SD
Sbjct: 115 ILWLDCDREGENIAFE-VMEVCRAANRYLTVRRARFSALIDREIHEAVQNLVSPNQCFSD 173
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFS--SAEIITGIVGDSISFGSCKTLLLNYAVNL 868
AV RQ+I +R+G S T+FQT L++ F +A+ +V +S+G C+ L + V
Sbjct: 174 AVDARQEIDLRIGASFTRFQTMLLRDKFDIDAAQDDRNLV---LSYGPCQFPTLGFIVER 230
Query: 869 WLENRTKTPKTSLRFIEGKHYFKGVWTL--FKTKVKHYVDTMINFYKC---GGGYVSKCR 1033
+ E ++ P+ +G+ T + + Y ++ + C V+K +
Sbjct: 231 YWEIQSHEPEEFWTLNCSHKSDEGIATFNWMRGHLFDYTSAVVLYEMCVQEPTATVTKVQ 290
Query: 1034 --------------VGMIKNL*YFLRALSQ-------DLYAGGLISYHRTKENL--SDEE 1144
+ + K + R S+ DLY G ISY RT+ + S +
Sbjct: 291 QQEKNKYPPYPLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSSRTD 350
Query: 1145 LKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKNWRN 1318
L+ IV +Q HP+WG YA L + R+ S+ G H PI P KF+AG E W +
Sbjct: 351 LQTIVQEQQPHPIWGSYAQRLLDHGEGLWRNPSSGGHDDKAHPPIHPTKFSAG-ETGW-S 408
Query: 1319 EETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYENLA 1498
++ ++++ + ++FLA +S+PA E+ F++ G I+ K +LD+Y +E+
Sbjct: 409 QDHHRVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVILAKNYLDVYRFESWG 468
Query: 1499 GSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHIQGLI 1678
GS +P Y + T ++ S + PP ++++DLLS MD+ GIGT AT+H HI+ L+
Sbjct: 469 GSMIPTYLHGEQF-IPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLL 527
Query: 1679 DNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERSKNDV 1858
D T+D T PT LG AL+ GY+ M Y+ W +LR M MR +S G +SK +V
Sbjct: 528 DRFYATKDPNT-RFSPTNLGEALVMGYDDMGYELWKPNLRSTMEGDMRRVSMGHKSKTEV 586
Query: 1859 LNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
L L +K F +++++ + F
Sbjct: 587 LETCLQQMKACFLDARINKIKLLEAMAVF 615
Score = 40.4 bits (93), Expect(2) = 1e-59
Identities = 34/111 (30%), Positives = 48/111 (43%)
Frame = +3
Query: 183 LIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTSANGH 362
L VAEKP VA+ VA LS +F+ FTYVI +P + +TS GH
Sbjct: 5 LNVAEKPSVAKSVATILSRNQQHGLRVREGRSRYNKIFE-FTYVINGQPCHMLMTSVTGH 63
Query: 363 LEKMILKNQRGNLLNFYDRASVLIGKDYVDLNAKRIAQRLKNEALDSQRLL 515
L + L F DR D DL + + + + + +D +R L
Sbjct: 64 LME----------LEFEDRFRKWHSCDPADLFSAPVRKFVPEDKIDIKRTL 104
>ref|XP_012081967.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Jatropha curcas]
Length = 857
Score = 220 bits (560), Expect(2) = 1e-59
Identities = 157/509 (30%), Positives = 252/509 (49%), Gaps = 32/509 (6%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E V ++C + N L V R L D I A+ + SD
Sbjct: 115 ILWLDCDREGENIAFE-VMEVCRAANRYLTVRRARFSALIDREIHEAVQNLVSPNQCFSD 173
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFS--SAEIITGIVGDSISFGSCKTLLLNYAVNL 868
AV RQ+I +R+G S T+FQT L++ F +A+ +V +S+G C+ L + V
Sbjct: 174 AVDARQEIDLRIGASFTRFQTMLLRDKFDIDAAQDDRNLV---LSYGPCQFPTLGFIVER 230
Query: 869 WLENRTKTPKTSLRFIEGKHYFKGVWTL--FKTKVKHYVDTMINFYKC---GGGYVSKCR 1033
+ E ++ P+ +G+ T + + Y ++ + C V+K +
Sbjct: 231 YWEIQSHEPEEFWTLNCSHKSDEGIATFNWMRGHLFDYTSAVVLYEMCVQEPTATVTKVQ 290
Query: 1034 --------------VGMIKNL*YFLRALSQ-------DLYAGGLISYHRTKENL--SDEE 1144
+ + K + R S+ DLY G ISY RT+ + S +
Sbjct: 291 QQEKNKYPPYPLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSSRTD 350
Query: 1145 LKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKNWRN 1318
L+ IV +Q HP+WG YA L + R+ S+ G H PI P KF+AG E W +
Sbjct: 351 LQTIVQEQQPHPIWGSYAQRLLDHGEGLWRNPSSGGHDDKAHPPIHPTKFSAG-ETGW-S 408
Query: 1319 EETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYENLA 1498
++ ++++ + ++FLA +S+PA E+ F++ G I+ K +LD+Y +E+
Sbjct: 409 QDHHRVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVILAKNYLDVYRFESWG 468
Query: 1499 GSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHIQGLI 1678
GS +P Y + T ++ S + PP ++++DLLS MD+ GIGT AT+H HI+ L+
Sbjct: 469 GSMIPTYLHGEQF-IPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLL 527
Query: 1679 DNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERSKNDV 1858
D T+D T PT LG AL+ GY+ M Y+ W +LR M MR +S G +SK +V
Sbjct: 528 DRFYATKDPNT-RFSPTNLGEALVMGYDDMGYELWKPNLRSTMEGDMRRVSMGHKSKTEV 586
Query: 1859 LNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
L L +K F +++++ + F
Sbjct: 587 LETCLQQMKACFLDARINKIKLLEAMAVF 615
Score = 40.4 bits (93), Expect(2) = 1e-59
Identities = 34/111 (30%), Positives = 48/111 (43%)
Frame = +3
Query: 183 LIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTSANGH 362
L VAEKP VA+ VA LS +F+ FTYVI +P + +TS GH
Sbjct: 5 LNVAEKPSVAKSVATILSRNQQHGLRVREGRSRYNKIFE-FTYVINGQPCHMLMTSVTGH 63
Query: 363 LEKMILKNQRGNLLNFYDRASVLIGKDYVDLNAKRIAQRLKNEALDSQRLL 515
L + L F DR D DL + + + + + +D +R L
Sbjct: 64 LME----------LEFEDRFRKWHSCDPADLFSAPVRKFVPEDKIDIKRTL 104
>gb|KMZ73897.1| DNA topoisomerase [Zostera marina]
Length = 945
Score = 226 bits (576), Expect(2) = 2e-59
Identities = 154/492 (31%), Positives = 239/492 (48%), Gaps = 32/492 (6%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E ++ +C +VN NL + R L D I ++ + + +D
Sbjct: 121 ILWLDCDREGENIAFEVID-VCTAVNHNLNIWRARFSALIDREIHQSVQNLGRPNKYFAD 179
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDSISFGSCKTLLLNYAVNLWL 874
AV RQ+I +R+G S T+FQT L+K F+ ++ +S+G C+ L + V +
Sbjct: 180 AVDARQEIDLRIGASFTRFQTMLLKDSFA-LDVPDETRNVVLSYGPCQFPTLGFIVERYW 238
Query: 875 ENRTKTPKTSLRFIEGKHYFKGVWTLFKTK---------------------------VKH 973
E ++ P+ I H G FK K VKH
Sbjct: 239 EIQSHEPE-DFWTINCSHVIDGATASFKWKRDRLFDFACSIVIYEICVEEPTATVKTVKH 297
Query: 974 YVDTMINFYKCGGGYVSKCRVGMIKNL*YFLRALSQDLYAGGLISYHRTKENLS--DEEL 1147
Y + K + +++DLY G ISY RT+ + + +L
Sbjct: 298 QEKLKYPPYPLSTIEIQKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSVNTDL 357
Query: 1148 KRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKNWRNE 1321
IV Q H +WG YA+ L ++ R+ G H PI P +FT+G E W +
Sbjct: 358 HAIVQQQTAHQIWGSYAELLLNPEARLWRNPGNGGHDDKAHPPIHPTQFTSG-ESRW-SP 415
Query: 1322 ETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYENLAG 1501
+ K+++ + ++FLA +S+PA ++ F+ G II K +LD+Y ++N G
Sbjct: 416 DHHKIYELVTRHFLACVSQPAVGAETIVDIDIAGEQFSVSGRTIIAKNYLDVYRFDNWGG 475
Query: 1502 SELPRYEQKQD-CKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHIQGLI 1678
S +P Y+ Q T T GS P PP +++SDLLS MD+ GIGT AT+H HI+ L+
Sbjct: 476 SIIPTYQTGQQFLPTTLTLDPGSTRP--PPLLSESDLLSCMDKAGIGTDATMHDHIKKLL 533
Query: 1679 DNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERSKNDV 1858
D + + +D+ T PT LG AL+ GY+ M Y+ W DLR M M+ +S G ++KN
Sbjct: 534 DRRYVIKDQNT-RFSPTNLGEALVMGYDDMGYELWKPDLRSTMEDDMKLVSLGTKTKNHA 592
Query: 1859 LNETLDNLKVWF 1894
L +L+ ++ F
Sbjct: 593 LRTSLEKMEACF 604
Score = 33.9 bits (76), Expect(2) = 2e-59
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Frame = +3
Query: 183 LIVAEKPEVAEFVARSLS--NGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTSAN 356
L VAEKP VA+ V+ LS G Y A+P VF +F I + + TS
Sbjct: 12 LNVAEKPSVAKAVSEILSRGGGGYRARPGRSCYNR---VF-EFDLTIKRQQCHMLFTSVT 67
Query: 357 GHLEKMILKNQRGNLLNFYDRASVLIG--KDYVDLNAKRIAQRLKNEALDSQRLLLY 521
GHL ++ + R N D + + YV + I + L+ EA+ Q L+L+
Sbjct: 68 GHLMELDF-DDRYRKWNSCDPTDLYHAPVRKYVPQDKLDIKRTLEEEAMKCQWLILW 123
>ref|XP_002465810.1| hypothetical protein SORBIDRAFT_01g046210 [Sorghum bicolor]
gi|241919664|gb|EER92808.1| hypothetical protein
SORBIDRAFT_01g046210 [Sorghum bicolor]
Length = 860
Score = 224 bits (572), Expect(2) = 2e-59
Identities = 161/512 (31%), Positives = 251/512 (49%), Gaps = 35/512 (6%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E ++ +C NS+L + R L D I ++ + + +D
Sbjct: 119 VLWLDCDREGENIAYEVID-VCTGANSHLNIWRARFSALIDREIHESVQHLGRPNKLFAD 177
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS----ISFGSCKTLLLNYAV 862
AV RQ+I +R+G S T+FQT L+K F + + GD +S+G C+ L + V
Sbjct: 178 AVDARQEIDLRIGASFTRFQTMLLKDAF-----VINVTGDDRNLVLSYGPCQFPTLGFIV 232
Query: 863 NLWLENRTKTPK---------------TSLRFIEGKHYFK-----GVWTLFKTKVKHYVD 982
+ E + P+ S +I G H F ++ + ++ V
Sbjct: 233 ERFWEIQAHEPEEFWTINCTHTSDEGTASFGWIRG-HLFDYSCAISIYEMCVSEPMATVQ 291
Query: 983 TMINFYKCGGGYVSKCRVGMIKNL*YFLRALSQ-------DLYAGGLISYHRTK-ENLS- 1135
+ N K V + K + R S+ +LY G ISY RT+ +N S
Sbjct: 292 NVRNQEKLKYPPYPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSP 351
Query: 1136 DEELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKN 1309
+ +L IV +QV HPVWG YA L ++ R+ S G H PI P KF+ G E+N
Sbjct: 352 NTDLHAIVREQVNHPVWGAYAQRLLNPEARLWRNPSNGGHDDKAHPPIHPTKFSEG-ERN 410
Query: 1310 WRNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYE 1489
W + + L++ + ++FLA S+PA E+ F + G I+ K +LD+Y ++
Sbjct: 411 WSPDHIR-LYELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVILAKNYLDVYRFD 469
Query: 1490 NLAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHIQ 1669
+ G+ LP Y Q T ++ S + PP + ++DLLS MD+ GIGT AT+H HI+
Sbjct: 470 SWGGTLLPTYNIGQQF-VPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIK 528
Query: 1670 GLIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERSK 1849
L+D T+D T PT LG AL+ GY+ M Y+ W LR M M+++S G +SK
Sbjct: 529 KLLDRCYATKDENT-RFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSMGTKSK 587
Query: 1850 NDVLNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
++VL L +K F + +++ + TF
Sbjct: 588 SEVLESCLQQMKACFLDARVNKAKLLDAMGTF 619
Score = 35.0 bits (79), Expect(2) = 2e-59
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 APRALIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTS 350
A R L VAEKP VA+ VA LS + ++ + +F Y I + VTS
Sbjct: 8 AIRVLNVAEKPSVAKAVAEILSRRSMQSRAGRSQYNRI----FEFNYAINGRACHMLVTS 63
Query: 351 ANGHLEKMILKNQRGNLLNFYDRASVLIG--KDYVDLNAKRIAQRLKNEALDSQRLLLY 521
GHL ++ ++R + D A + + V + + I Q L+ EA Q L+L+
Sbjct: 64 VTGHLMELEF-DERFRRWHSCDPAELFHAPVRKSVPQDKQAIKQTLEEEARRCQWLVLW 121
>ref|XP_010025763.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Eucalyptus grandis]
gi|629096505|gb|KCW62500.1| hypothetical protein
EUGRSUZ_H05141 [Eucalyptus grandis]
Length = 915
Score = 224 bits (572), Expect(2) = 3e-59
Identities = 163/514 (31%), Positives = 255/514 (49%), Gaps = 37/514 (7%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E ++ C + N NL + R L + I ++ + + +D
Sbjct: 119 VLWLDCDREGENIAFEVIDT-CTAANCNLTIKRARFSALIEREIHDSVQNLVEPNRWFAD 177
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS---ISFGSCKTLLLNYAVN 865
AV RQ+I +R+G S T+FQT L++ F +I D +S+G C+ L + V
Sbjct: 178 AVDARQEIDLRIGASFTRFQTMLLRDAF----VIDSAADDRNLVLSYGPCQFPTLGFVVE 233
Query: 866 LWLENRTKTPKT------SLRFIEGKHYFKGVWTLFKTKVKHYVDTMINFYKC------- 1006
+ E ++ P+ S + EG F WT + + Y +I + C
Sbjct: 234 RFWEIQSHEPEEFWIINCSHKSEEGIATFN--WT--RGHLFDYTCAVIIYEMCVEEPPAT 289
Query: 1007 --GGGYVSKCR--------VGMIKNL*YFLRALSQ-------DLYAGGLISYHRTK-ENL 1132
G K + + + K + R S+ +LY G ISY RT+ +N
Sbjct: 290 VAGVRQQEKYKYPPHPLSTIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNF 349
Query: 1133 SDE-ELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSE 1303
S +L IV +Q GHPVWG YA L + + R+ S G H PI P KF+ G E
Sbjct: 350 SARTDLHAIVQEQRGHPVWGSYAQRLLDPSSGLWRNPSNGGHDDKAHPPIHPTKFSGG-E 408
Query: 1304 KNWRNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYN 1483
+NW +++ +L++ + ++FLA +S+PA E+ F + G II K +LD+Y
Sbjct: 409 RNW-SQDHHRLYELVVRHFLACVSQPAVGAETTVEIDIAGEQFAASGRVIIAKNYLDVYR 467
Query: 1484 YENLAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTH 1663
+E+ GS +P Y Q T ++ S + PP ++++DLL+ MD+ GIGT AT+H H
Sbjct: 468 FESWGGSVIPTYVPGQQF-IPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDH 526
Query: 1664 IQGLIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGER 1843
I+ L+D T+D + M PT LG AL+ GY+ M YK W +LR M MRA+S G +
Sbjct: 527 IKKLLDRFYATKD-QNMRFSPTNLGEALVMGYDDMGYKLWKPNLRSMMEFDMRAVSEGAK 585
Query: 1844 SKNDVLNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
+K +VL L +K F + +++ + F
Sbjct: 586 TKAEVLETCLQQMKACFLDARSNKQKLMEAMAVF 619
Score = 34.7 bits (78), Expect(2) = 3e-59
Identities = 35/115 (30%), Positives = 47/115 (40%)
Frame = +3
Query: 171 APRALIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTS 350
A L VAEKP VA+ VA LS G + + +F Y I + + VTS
Sbjct: 7 AINVLNVAEKPSVAKSVATLLSRGQ---GMRVREGRSRYNKIFEFDYGIRGQRCRMLVTS 63
Query: 351 ANGHLEKMILKNQRGNLLNFYDRASVLIGKDYVDLNAKRIAQRLKNEALDSQRLL 515
GHL + L F DR D DL A + + + + LD +R L
Sbjct: 64 VTGHLME----------LEFEDRFRKWHSCDPADLYAAPVRKSVPQDKLDIKRTL 108
>ref|XP_010025764.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Eucalyptus grandis]
gi|629096506|gb|KCW62501.1| hypothetical protein
EUGRSUZ_H05141 [Eucalyptus grandis]
Length = 914
Score = 224 bits (572), Expect(2) = 3e-59
Identities = 163/514 (31%), Positives = 255/514 (49%), Gaps = 37/514 (7%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E ++ C + N NL + R L + I ++ + + +D
Sbjct: 119 VLWLDCDREGENIAFEVIDT-CTAANCNLTIKRARFSALIEREIHDSVQNLVEPNRWFAD 177
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS---ISFGSCKTLLLNYAVN 865
AV RQ+I +R+G S T+FQT L++ F +I D +S+G C+ L + V
Sbjct: 178 AVDARQEIDLRIGASFTRFQTMLLRDAF----VIDSAADDRNLVLSYGPCQFPTLGFVVE 233
Query: 866 LWLENRTKTPKT------SLRFIEGKHYFKGVWTLFKTKVKHYVDTMINFYKC------- 1006
+ E ++ P+ S + EG F WT + + Y +I + C
Sbjct: 234 RFWEIQSHEPEEFWIINCSHKSEEGIATFN--WT--RGHLFDYTCAVIIYEMCVEEPPAT 289
Query: 1007 --GGGYVSKCR--------VGMIKNL*YFLRALSQ-------DLYAGGLISYHRTK-ENL 1132
G K + + + K + R S+ +LY G ISY RT+ +N
Sbjct: 290 VAGVRQQEKYKYPPHPLSTIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNF 349
Query: 1133 SDE-ELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSE 1303
S +L IV +Q GHPVWG YA L + + R+ S G H PI P KF+ G E
Sbjct: 350 SARTDLHAIVQEQRGHPVWGSYAQRLLDPSSGLWRNPSNGGHDDKAHPPIHPTKFSGG-E 408
Query: 1304 KNWRNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYN 1483
+NW +++ +L++ + ++FLA +S+PA E+ F + G II K +LD+Y
Sbjct: 409 RNW-SQDHHRLYELVVRHFLACVSQPAVGAETTVEIDIAGEQFAASGRVIIAKNYLDVYR 467
Query: 1484 YENLAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTH 1663
+E+ GS +P Y Q T ++ S + PP ++++DLL+ MD+ GIGT AT+H H
Sbjct: 468 FESWGGSVIPTYVPGQQF-IPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDH 526
Query: 1664 IQGLIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGER 1843
I+ L+D T+D + M PT LG AL+ GY+ M YK W +LR M MRA+S G +
Sbjct: 527 IKKLLDRFYATKD-QNMRFSPTNLGEALVMGYDDMGYKLWKPNLRSMMEFDMRAVSEGAK 585
Query: 1844 SKNDVLNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
+K +VL L +K F + +++ + F
Sbjct: 586 TKAEVLETCLQQMKACFLDARSNKQKLMEAMAVF 619
Score = 34.7 bits (78), Expect(2) = 3e-59
Identities = 35/115 (30%), Positives = 47/115 (40%)
Frame = +3
Query: 171 APRALIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTS 350
A L VAEKP VA+ VA LS G + + +F Y I + + VTS
Sbjct: 7 AINVLNVAEKPSVAKSVATLLSRGQ---GMRVREGRSRYNKIFEFDYGIRGQRCRMLVTS 63
Query: 351 ANGHLEKMILKNQRGNLLNFYDRASVLIGKDYVDLNAKRIAQRLKNEALDSQRLL 515
GHL + L F DR D DL A + + + + LD +R L
Sbjct: 64 VTGHLME----------LEFEDRFRKWHSCDPADLYAAPVRKSVPQDKLDIKRTL 108
>ref|XP_009355843.1| PREDICTED: DNA topoisomerase 3-alpha [Pyrus x bretschneideri]
Length = 972
Score = 221 bits (563), Expect(2) = 5e-59
Identities = 157/510 (30%), Positives = 253/510 (49%), Gaps = 33/510 (6%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E + ++C +VN +L + R LT+ I A+ + +D
Sbjct: 121 VLWLDCDREGENIAFEVI-EVCTAVNRHLTIRRARFSALTERDIYNAVQNLVNANKFFAD 179
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLFSSAEIITGIVGDS---ISFGSCKTLLLNYAVN 865
AV RQ+I +R+G S T+FQT L++ F +I D +S+G C+ L + V
Sbjct: 180 AVDARQEIDLRIGASFTRFQTMLLRDAF----VIDSTASDRNLVLSYGPCQFPTLGFVVE 235
Query: 866 LWLENRTKTPKTSLRFIEGKHYFKGVWTL--FKTKVKHYVDTMINFYKC---GGGYVSKC 1030
+ E ++ P+ +G T + + Y ++ + C V+K
Sbjct: 236 RYWEIQSHEPEEFWTINCSHKSDEGTATFHWMRGHLFDYACAVVIYEMCVEEPTATVTKV 295
Query: 1031 R--------------VGMIKNL*YFLRALSQ-------DLYAGGLISYHRTKENLSDE-- 1141
R + + + + R S+ +LY G ISY RT+ + E
Sbjct: 296 RQQEKLKKPPNPLNTIQLEQRASIYFRMSSEHTMKVAEELYQAGFISYPRTETDGFSERT 355
Query: 1142 ELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTAGSEKNWR 1315
+L IV++Q HP WG YA L + + ++ S G H PI P KF++G E W
Sbjct: 356 DLHAIVEEQQRHPGWGSYAQRLLDPASGLWKNPSNGGHDDKAHPPIHPTKFSSG-ESGW- 413
Query: 1316 NEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLDIYNYENL 1495
+++ +L++ + ++FLA +S+PA E+ F++ G I+ K +LD+Y +E+
Sbjct: 414 SQDHHRLYELVVRHFLACVSQPAVGAETTVEIDIAGELFSASGRVILAKNYLDVYRFESW 473
Query: 1496 AGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATVHTHIQGL 1675
GS LP YE Q T ++ S + PP ++++DLLS MD+ GIGT AT+H HI+ L
Sbjct: 474 GGSLLPTYEFGQQF-VPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKL 532
Query: 1676 IDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISSGERSKND 1855
+D T+D +M PT LG AL+ GY+ M YK W LR M + M+A+S G +SK +
Sbjct: 533 LDRFYATKD-SSMRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGAKSKAE 591
Query: 1856 VLNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
VL L +K F ++++ + F
Sbjct: 592 VLETCLQQMKACFLDARLNKVKLFEAMSVF 621
Score = 37.4 bits (85), Expect(2) = 5e-59
Identities = 35/113 (30%), Positives = 47/113 (41%)
Frame = +3
Query: 177 RALIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTSAN 356
R L VAEKP VA+ VA LS GN + + +F Y I P + VTS
Sbjct: 9 RVLNVAEKPSVAKSVATLLS-GNQGQGLRVREGRSRYNKIYEFNYSINGRPCHMIVTSVT 67
Query: 357 GHLEKMILKNQRGNLLNFYDRASVLIGKDYVDLNAKRIAQRLKNEALDSQRLL 515
GHL + L F DR D L + +++ + LD +R L
Sbjct: 68 GHLME----------LEFEDRFRKWHACDPALLFTAPVHKKVPEDKLDIKRTL 110
>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
gi|223533243|gb|EEF34998.1| prokaryotic DNA
topoisomerase, putative, partial [Ricinus communis]
Length = 833
Score = 223 bits (569), Expect(2) = 9e-59
Identities = 164/517 (31%), Positives = 247/517 (47%), Gaps = 40/517 (7%)
Frame = +2
Query: 515 LIWLDMDEEGENICCEEVNKICLSVNSNLMVDRVHCVKLTDDSIKAAMLKFFKIDTNMSD 694
++WLD D EGENI E V+ +C S N L V R L D I A + SD
Sbjct: 115 ILWLDCDREGENIAFEVVD-VCRSANRYLTVRRARFSALIDREIHEAAQNLVSPNQWFSD 173
Query: 695 AVAFRQDIGIRVGFSCTQFQTNLIKGLF--SSAEIITGIVGDSISFGSCKTLLLNYAVNL 868
AV RQ+I +R+G S T+FQT L++ F SA+ +V +S+G C+ L + V
Sbjct: 174 AVDARQEIDLRIGASFTRFQTLLLRDKFVIDSAQDDRNLV---LSYGPCQFPTLGFIVER 230
Query: 869 WLENRTKTPK---------TSLRFIEGKHYFKG-------------------------VW 946
+ E ++ + TS+ I + +G V
Sbjct: 231 YWEIQSHESEEFWTINCSHTSVEGIANFSWMRGHLFDYTSAVILYELCVLEPTATVTKVQ 290
Query: 947 TLFKTKVKHYVDTMINFYKCGGGYVSKCRVGMIKNL*YFLRALSQDLYAGGLISYHRTKE 1126
K K Y + I K Y +K +++DLY G ISY RT+
Sbjct: 291 QKEKQKYPPYPLSTIELEKRASRYFHMSSEQTMK--------VAEDLYQSGFISYPRTET 342
Query: 1127 N--LSDEELKRIVDDQVGHPVWGDYADELSRSMTKMKRHASTQGVGP--HTPIVPIKFTA 1294
+ S +L IV DQ HP+WG YA L T + R+ ST G H PI P KF+
Sbjct: 343 DGFSSRTDLHTIVRDQQAHPIWGSYAQRLLDPGTGLWRNPSTGGHDDKAHPPIHPTKFSP 402
Query: 1295 GSEKNWRNEETKKLFQFINKYFLASLSKPASIKTFDAEMMFGATSFTSKGEKIITKGFLD 1474
G E W +++ ++++ + ++FLA +S+PA E+ F++ G I+ K +LD
Sbjct: 403 G-ETGW-SQDHHRVYELVVRHFLACVSQPAVGAETTVEIDIAGEQFSASGRVILAKNYLD 460
Query: 1475 IYNYENLAGSELPRYEQKQDCKTAPTFSVGSPIPMSPPHVTDSDLLSFMDRMGIGTPATV 1654
+Y +E+ GS +P Y Q T ++ S + PP +++SDLLS MD+ GIGT AT+
Sbjct: 461 VYRFESWGGSMIPTYVHGQQFMPT-TLTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATM 519
Query: 1655 HTHIQGLIDNKLITRDRETMEIEPTALGVALICGYNSMEYKAWSRDLRDYMVQGMRAISS 1834
H HI+ L+D T+D T PT LG AL+ GY+ M Y+ W +LR M M+ +S
Sbjct: 520 HDHIKKLLDRFYATKDANT-RFSPTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSM 578
Query: 1835 GERSKNDVLNETLDNLKVWFRRILKGQLEIVRGVRTF 1945
G +SK +VL L +K F +++++ + F
Sbjct: 579 GHKSKAEVLETCLQQMKTCFLDARINKVKLLEAMAVF 615
Score = 34.3 bits (77), Expect(2) = 9e-59
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = +3
Query: 183 LIVAEKPEVAEFVARSLSNGNYTAKPKXXXXXXLPDVFQDFTYVIGEEPWEIAVTSANGH 362
L VAEKP VA+ VA LS +F+ F YVI + + VTS GH
Sbjct: 5 LNVAEKPSVAKSVATILSRNQQHGLRVREGQSRYNKIFE-FNYVINGQNCHMLVTSVTGH 63
Query: 363 LEKMILKNQRGNLLNFYDRASVLIG--KDYVDLNAKRIAQRLKNEALDSQRLLLY 521
L ++ + R + D A + + +V + I + L+ EA Q L+L+
Sbjct: 64 LMELEF-DDRFRKWHSCDPADLYHAPVRKFVPEDKTNIKRTLEEEARRCQWLILW 117