BLASTX nr result
ID: Papaver30_contig00038338
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00038338
(3924 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008244613.1| PREDICTED: putative ribonuclease H protein A... 226 2e-55
ref|XP_008233458.1| PREDICTED: putative ribonuclease H protein A... 222 2e-54
ref|XP_008245529.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 221 4e-54
ref|XP_010673168.1| PREDICTED: uncharacterized protein LOC104889... 216 1e-52
ref|XP_008378657.1| PREDICTED: putative ribonuclease H protein A... 215 3e-52
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 214 4e-52
ref|XP_008367096.1| PREDICTED: putative ribonuclease H protein A... 213 1e-51
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 213 1e-51
ref|XP_009375083.1| PREDICTED: uncharacterized protein LOC103963... 208 4e-50
ref|XP_008225175.1| PREDICTED: putative ribonuclease H protein A... 207 5e-50
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 206 1e-49
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 206 1e-49
ref|XP_008226782.1| PREDICTED: putative ribonuclease H protein A... 206 2e-49
ref|XP_008352230.1| PREDICTED: putative ribonuclease H protein A... 200 1e-47
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo... 199 1e-47
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 199 1e-47
ref|XP_008385035.1| PREDICTED: putative ribonuclease H protein A... 199 2e-47
ref|XP_007210228.1| hypothetical protein PRUPE_ppa015539mg [Prun... 198 3e-47
ref|XP_010054376.1| PREDICTED: uncharacterized protein LOC104442... 198 4e-47
ref|XP_008346916.1| PREDICTED: putative ribonuclease H protein A... 197 7e-47
>ref|XP_008244613.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 930
Score = 226 bits (575), Expect = 2e-55
Identities = 155/572 (27%), Positives = 260/572 (45%), Gaps = 18/572 (3%)
Frame = +1
Query: 2218 WSRQQNSK--GILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQ 2391
W R +N+ I ++I ++ GW+ +++ + + V +++ + M F+ P+ T
Sbjct: 304 WGRSKNAALGYIKERIRKKIDGWKLNSLSLAGKEVPLKVVATAVPAFPMTCFRFPEGTCN 363
Query: 2392 QMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHN 2571
Q++ +WW N + SW+K+ + K+ GGLG + LSN+N A +AK SW + N
Sbjct: 364 QINSDLASFWWGNNEESAGIHWKSWKKLCLAKKVGGLGFRDLSNFNLALIAKQSWRIILN 423
Query: 2572 QDALYGRILKGKYFPFFDLQYYPPADTKNSR--WLWQSLCYGLQIIMENAK*QVGDGSTI 2745
+A + +ILK +YFP D TK SR W W S G + +M+ A+ Q+ G+
Sbjct: 424 PEAAWVKILKARYFPTTDFL----NATKGSRPSWAWVSFLEGRKAMMKEARFQIFSGANT 479
Query: 2746 NIWTANWIPSMASA-LQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILT 2922
NIW WIPS S ++ + Q V EL++ W ++ + ++ + SI
Sbjct: 480 NIWNDVWIPSCESGPVKTLQPIPPQAPQLVQELMDKQNHTWKLDSISTFINNDILQSI-- 537
Query: 2923 NLIQLDH---PDTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVSLN-----LSQSFWLKFW 3078
I + H PD L+W + ++G +T S Y A+ + + S N +S+ W W
Sbjct: 538 RCIPIGHSSRPDRLVWPWNSSGSYTVKSGYHRFHARQNTDIASHNHSSHFVSEGVWKTIW 597
Query: 3079 KLKMPYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQA 3258
K++ K ++FLW+ L ++ + LF+ +D C +C G E V+H+L CP+ Q
Sbjct: 598 KVETLPKIKLFLWRALSGYISTRLALFKRKIATDPICPICE-GFEESVEHILFLCPWTQL 656
Query: 3259 VWRKSLPQYFSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVI 3438
VW S Y + ST WI+ I RCK +
Sbjct: 657 VWFGSNLSYKVDPRRISTFDRWIEG-IISIPGTSRTDGDFLLSFLSFLCWEIWKARCKFV 715
Query: 3439 FSNLNPNPNTVI----HQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVL 3606
F+ ++P+P VI S Y++V N +HH R W P + +
Sbjct: 716 FNGVSPDPRLVITHARDACSEYLAVVSKVDARGNLSPVHHVQGTR------WSKPGPNYV 769
Query: 3607 KVNIDASFNPQSLIAGLSI-TRNYARQYVVGKGAIKRAINVHQAEAWALLEAMDMASTHG 3783
K N+D S+ P ++ + I +RN + + G + ++ AEA A L A+ +A G
Sbjct: 770 KFNLDGSWLPGTMKGSIGIVSRNSSGDWCGGLASPLSCVSSLSAEAAAALCALHLAKNRG 829
Query: 3784 WTQVIFETDNLNIXXXXXXXXXXXXWQSLPIL 3879
+VI ETD + W LP++
Sbjct: 830 NMKVILETDCKVLLDGISGNHDNNSWAILPLI 861
>ref|XP_008233458.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 811
Score = 222 bits (566), Expect = 2e-54
Identities = 145/553 (26%), Positives = 250/553 (45%), Gaps = 10/553 (1%)
Frame = +1
Query: 2251 DKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMDKIQRKYWWNN 2430
+++ + GW+ T++ + + +V +++ Y M F+ P+ T +++ +WW N
Sbjct: 194 ERVKKMIAGWKQNTLSMAGKEVLIKSVATAIPAYPMTCFRFPEGTCNEINSDLANFWWGN 253
Query: 2431 YNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDALYGRILKGKY 2610
+ + SW+K+ V K+ GGLG + LS++N A LAK +W + N +++ +IL+ +Y
Sbjct: 254 STEGNGLHWKSWKKLGVSKKSGGLGFRDLSSFNLALLAKQAWRIVQNPQSIWAQILQARY 313
Query: 2611 FPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTANWI-PSMASA 2787
FP + S W W SL G ++ AK Q+ +G+T NIW NWI S +
Sbjct: 314 FP--HCNFLQAKKGSRSSWAWASLIEGRDALLMEAKFQIFNGATTNIWKDNWISASNSGV 371
Query: 2788 LQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD-HPDTLIWH 2964
++ + + Q V E+++ WN++L+ E +N I + I L PD L+W
Sbjct: 372 IKPTCPVPITAPQLVCEIMDKPNHSWNLDLIADCLDRETINLIRSTPISLSPRPDRLVWP 431
Query: 2965 FTTAGIFTNSSTY-KMLCAKDSP----NDVSLNLSQSFWLKFWKLKMPYKFQIFLWKGLH 3129
+ G F+ S Y + +K+ P S ++ W W +K K + FLW+ +
Sbjct: 432 WNPNGSFSVRSGYHRFHTSKNGPLLQHTYSSHSVDAKVWKVIWNIKTLPKIKHFLWRAIS 491
Query: 3130 NALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKSLPQYFSSIVQHS 3309
A++ + LFR ++ C +CN E V+H+L CP+ VW S+ Y +
Sbjct: 492 GAISSRLALFRRKLVTNPLCPICNC-FEESVEHILFLCPWTHPVWFGSVFSYRIIPNAFT 550
Query: 3310 TLLSWIQSW-QIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSNLNPNPNTVIHQIS 3486
TL W+ I D+P RC +F NP+P VI + +
Sbjct: 551 TLDRWLHDMLSIPDTP--HEDFLHRFSLLSFLCWEIWKARCDFVFKGTNPDPRLVIKRAN 608
Query: 3487 -YYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDASFNPQSLIAGLS- 3660
Y +T S S ++ W PPP + +K+N D +++P + +
Sbjct: 609 DSYSEFWEANTCFSRLSGSRTSPSSPYVGRDRWLPPPANAIKINFDGAWSPGTSHGSIGV 668
Query: 3661 ITRNYARQYVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQVIFETDNLNIXXXXXX 3840
I R+ + G + + AEA A L A+ A T +++V+FE+D+
Sbjct: 669 IARDDCGTWRGGTASPISCNSALVAEAAAALYAVSYAITRDFSKVVFESDSKVFVDSILG 728
Query: 3841 XXXXXXWQSLPIL 3879
W LPIL
Sbjct: 729 NHGNYSWTILPIL 741
>ref|XP_008245529.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103343662
[Prunus mume]
Length = 1725
Score = 221 bits (563), Expect = 4e-54
Identities = 151/563 (26%), Positives = 241/563 (42%), Gaps = 8/563 (1%)
Frame = +1
Query: 2245 ILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMDKIQRKYWW 2424
+ DKI ++QGW+ ++Q R + +V ++ Y M VF P+ Q++D I +WW
Sbjct: 792 VKDKILGKIQGWKHGLLSQAGREVLIKSVAQAVPSYPMSVFLFPNGFCQEIDSILANFWW 851
Query: 2425 NNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDALYGRILKG 2604
+ + SW+ + +PK GG+G ++L ++N A LAK W + A + ++LK
Sbjct: 852 GQSQQSNKIHWISWKDLGMPKNEGGMGFRNLKDFNVALLAKQGWRMVTEPQAFWAQLLKS 911
Query: 2605 KYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTANWIPSMAS 2784
KYFP D + S W W SL G IIM A+ QV DGS +++WT WIP
Sbjct: 912 KYFPNCD--FLRAGKGAKSSWAWSSLLVGRNIIMNGARWQVLDGSRVHLWTDKWIPGCTE 969
Query: 2785 ALQHWDELHLHDLQ-WVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD--HPDTL 2955
L DL+ V +I+ + +WN+ + +F S I+ + D D L
Sbjct: 970 HALQPSHLSQVDLEAKVETIIDCHSREWNLEAIGGMF-SPNAAKIIKAMPLGDGWEKDRL 1028
Query: 2956 IWHFTTAGIFTNSSTYKMLCAKDSPNDV----SLNLSQSFWLKFWKLKMPYKFQIFLWKG 3123
IW G +T S Y M+ V S L ++ W W +M K F W+
Sbjct: 1029 IWPLNQTGSYTVKSGYNMIHMAHLDTSVRPSSSRILDKALWKLIWGSQMVPKLMNFWWRL 1088
Query: 3124 LHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKSLPQYFSSIVQ 3303
+ L + LFR + C +C E V+HL L C + + VW Y +
Sbjct: 1089 VRGCLPTRDALFRRHLGTSPLCPICGE-FPESVEHLFLLCNWVRPVWFGGPLNYRINRQS 1147
Query: 3304 HSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSNLNPNPNTVIHQI 3483
+++ W+ ++ S RC IF +++ P +
Sbjct: 1148 ITSMSDWLMQ-ILKFSQGLGYDRKWLISQIFYSCWSIWKSRCSAIFDDISVCPRNTLLVA 1206
Query: 3484 SYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDASFNPQSLIAGLS- 3660
++ +L L + + + W PPP V K+NIDAS+ +L AGL
Sbjct: 1207 KKLMNDFNLVGCPHGDAILEEDIDDGHRVVR-WSPPPTSVYKINIDASWVSCTLQAGLGV 1265
Query: 3661 ITRNYARQYVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQVIFETDNLNIXXXXXX 3840
+ RN A ++ G + A + +AEA A L+ + +A G+ V+FE+D+ +
Sbjct: 1266 VVRNSAGIFMGGCCGPRLASSAIEAEAHAALKGVKLAVERGFPNVVFESDSKELVQSVKG 1325
Query: 3841 XXXXXXWQSLPILRKCMNQCWEF 3909
W PIL C F
Sbjct: 1326 NILKGRWMIYPILSAIRRHCSSF 1348
Score = 70.1 bits (170), Expect = 2e-08
Identities = 52/203 (25%), Positives = 80/203 (39%), Gaps = 21/203 (10%)
Frame = +1
Query: 1597 MKIFCWNCQGIGNPHTRDYLKFCLHQYEPDIFFLSETKA*PNNMR--------------- 1731
M WNCQG+G+ T L+ + P I FL ETK N +
Sbjct: 1 MSYLAWNCQGLGSDLTIRSLRETIKGKRPSIVFLMETKQKQNRLTRLARDVGFDHEGSSG 60
Query: 1732 -FYLSHTR----YPHYWFYPAIGLSGGIALAWKNGVDVEIMHTTSDTIFAIIHTHDHNSD 1896
++LS + H + +G SGG+ L W + V VE+ + I + +
Sbjct: 61 GYHLSRLARDVGFDHEVYADPVGTSGGLCLWWDDRVQVEVTICSKYLIDSWVTEQGSGVR 120
Query: 1897 FLVTFMYGAYNVVDNNNQWQYLLDMHSSVDLPWALLGDLNFXXXXXXXXXXXXXXXXXNN 2076
F +++YG+ + W +L + SV PW +GD N
Sbjct: 121 FRASWVYGSPYRDEKEACWGWLDSVLGSVVFPWLCIGDFNDMLWDFEKRGGRRLDNNRRR 180
Query: 2077 II-NFVQQLGLIDLGYVGSDSTW 2142
+ F+ + L+DLGY GS TW
Sbjct: 181 YLQEFLDKKELVDLGYQGSSFTW 203
>ref|XP_010673168.1| PREDICTED: uncharacterized protein LOC104889608 [Beta vulgaris subsp.
vulgaris]
Length = 1712
Score = 216 bits (550), Expect = 1e-52
Identities = 147/541 (27%), Positives = 257/541 (47%), Gaps = 7/541 (1%)
Frame = +1
Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
S+Q GI+D+++ +LQGW+ K +++ + + TV+ ++ Y M V++ P + ++ +
Sbjct: 1121 SKQHLFSGIMDRVWKKLQGWKEKLLSRAGKEVLLKTVIQAIPTYVMGVYRFPVAIVKSIH 1180
Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
K+WW + + SW+ M PK GG+G + LS +N A L + +W L +D+
Sbjct: 1181 SAMAKFWWGSKGDRRPMYWKSWESMCNPKCLGGMGFRDLSVFNEALLGRQAWRLIQCEDS 1240
Query: 2581 LYGRILKGKYFP---FFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINI 2751
L ++LK KY+P F D P + W+S+ ++ E +VG+G+TINI
Sbjct: 1241 LLSKVLKAKYYPSSSFLDASLGPVGS-----YSWRSIWGSKSLVKEGILWRVGNGATINI 1295
Query: 2752 WTANWIPSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLI 2931
W W+ + S + + L++V +LI+ + +W+ N++ +LF + + +IL +
Sbjct: 1296 WDDPWVLNGES--RFISSGRVERLKYVCDLIDFGSMEWDANVVNELFNEQDIQAILAVPL 1353
Query: 2932 --QLDHPDTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVSLNLSQSFWLKFWKLKMPYKFQ 3105
+L H D + W FT G ++ + Y + ++ +L+L W+ W L++ K +
Sbjct: 1354 SERLPH-DRVAWAFTKDGRYSVKTAYMVGKSR------NLDLFHRAWVTIWGLQVSPKVR 1406
Query: 3106 IFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKSLPQY 3285
FLWK N+L V+A L TSD C +C G E + H LLHC + VW +
Sbjct: 1407 HFLWKICSNSLPVRAILKHRHITSDDTCPLCLEG-PETISHALLHCSKVREVWEMA---G 1462
Query: 3286 FSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSNLNPNPN 3465
+S + + SW+ SW R KV+F + PN
Sbjct: 1463 LTSKLPNGDGASWLDSWD-----EWQEVEKDSLVALSYVAYYVWHRRNKVVFEDW-CRPN 1516
Query: 3466 TVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKN-TWRPPPMDVLKVNIDASFNPQS 3642
+ ++ + + + S ++ S++ +NA + W+PPP +K+N DAS
Sbjct: 1517 EQVAALAMRAAADY----NEYSQHIYGSVAGQNARSSKVWQPPPAGCVKLNADASIGDDG 1572
Query: 3643 LIAGLSITRNYARQYV-VGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQVIFETDNLN 3819
+ + RN + + +K V AE AL A+ +A +H VIFETD L
Sbjct: 1573 WVGMGVVARNEVGEVLFAASRRVKAWWPVEVAEGKALCLAIKLARSHDLQNVIFETDCLT 1632
Query: 3820 I 3822
I
Sbjct: 1633 I 1633
>ref|XP_008378657.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 653
Score = 215 bits (547), Expect = 3e-52
Identities = 146/574 (25%), Positives = 256/574 (44%), Gaps = 16/574 (2%)
Frame = +1
Query: 2218 WSRQQNS--KGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQ 2391
W R + + + ++ +LQGW+ T++Q R + V ++ Y M +FK P S
Sbjct: 9 WGRSKKAGLAYVKGRLLDKLQGWKKSTLSQAGREILIKAVAQAIPAYPMNLFKFPVSFCN 68
Query: 2392 QMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHN 2571
+MD + K+WW ++ + S +++ K GGLGL + +N A LAK W L
Sbjct: 69 EMDALITKFWWGQKLGENRIHWVSRERLGRSKEEGGLGLXSFTIFNDALLAKQCWRLISE 128
Query: 2572 QDALYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINI 2751
+ L+ +LK +YFP + + + W+W SL G +I+ A Q+ DG+ +
Sbjct: 129 PNTLWALVLKARYFP--NXSFLDAKXGXRASWVWASLLXGREILRAGAHWQIMDGNDTRV 186
Query: 2752 WTANWIPSM-ASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNL 2928
W WIP + + + V LI + +W+++ L+ +V +IL +L
Sbjct: 187 WVDRWIPPIPLGRPSPLGSVQVSKNLKVKSLICPVSGEWDLDFLKPFLADSEVEAIL-DL 245
Query: 2929 IQLDH--PDTLIWHFTTAGIFTNSSTY-------KMLCAKDSPNDVSLNLSQSFWLKFWK 3081
D D L+W F G ++ S Y ++ C + + +++ + W WK
Sbjct: 246 XTGDPMLKDRLVWPFDKRGSYSVKSGYYWSLNRSQVRCQQPTR---LVSIPSTLWKNVWK 302
Query: 3082 LKMPYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAV 3261
LK+P K + FLWK LH AL L+ S+ C +CN+ E ++HL L CP+ + V
Sbjct: 303 LKVPPKIRTFLWKTLHAALATMKNLYIRRSSPSPTCPLCNS-FDESIEHLFLFCPWVEVV 361
Query: 3262 WRKSLPQYFSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIF 3441
W + Q S+ SW+ ++ RC F
Sbjct: 362 WFGGRLNLRPNRQQVSSXASWLXQMGAAEN-GSXEVRIDRISYIAFTCWHIWKSRCDFQF 420
Query: 3442 SNLNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNID 3621
+N P+ V+ +S +S + + +S +L + S+ + +K W P V+K+N+D
Sbjct: 421 NNQVIYPSRVVAAVSRSVSDYQGTILRQSSRSLLNHSSLGDGVK--WXHPDHGVIKINVD 478
Query: 3622 ASFNPQSLIAGLSITRNYARQ----YVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWT 3789
A++ +S G+ T AR ++ +A AEA A+L ++ ++GW
Sbjct: 479 ANWEAKS---GVGFTGVVARDEQGCFLAASRQKIKATGATMAEALAILHGCNLGVSNGWN 535
Query: 3790 QVIFETDNLNIXXXXXXXXXXXXWQSLPILRKCM 3891
+ E+D+ + W + P+LRKC+
Sbjct: 536 SICVESDSYDAISCLWDPALKGNWDAFPVLRKCL 569
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 214 bits (546), Expect = 4e-52
Identities = 150/545 (27%), Positives = 241/545 (44%), Gaps = 13/545 (2%)
Frame = +1
Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
SR + + ++I+ R+QGW+ K +++ + + V ++ + M F++ Q+
Sbjct: 1016 SRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQIS 1075
Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
K+ KYWW+N + + SW K+ +PK GGLG + + +N A LAK W L + D+
Sbjct: 1076 KMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDS 1135
Query: 2581 LYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTA 2760
L R+L+ KYFP D + P T N + W+S+ GL+++ +VGDGS INIW
Sbjct: 1136 LCSRVLRAKYFPLGDC--FRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWAD 1193
Query: 2761 NWIPSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD 2940
WIP S + + + V ELI+ W+ +LL Q F E V +I + + ++
Sbjct: 1194 PWIPRGWSR-KPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE 1252
Query: 2941 HPDTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVSLN----------LSQSFWLKFWKLKM 3090
D L WHF G FT S YK+ ++ S N FW K WKL +
Sbjct: 1253 MEDVLAWHFDARGCFTVKSAYKV--QREMERRASRNGCPGVSNWESGDDDFWKKLWKLGV 1310
Query: 3091 PYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRK 3270
P K + FLW+ HN L ++A L D +CV+C +ED HL C + VW+
Sbjct: 1311 PGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGR-YNEDAGHLFFKCKPVKKVWQA 1369
Query: 3271 -SLPQYFSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSN 3447
+L + S + Q ++ + +QS + R +V
Sbjct: 1370 LNLEELRSMLEQQTSGKNVLQSIYCRPE--------NERTSAIVCLWQWWKERNEVREGG 1421
Query: 3448 LNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDAS 3627
+ +P + H I V + S R WR PP++ +K+N D +
Sbjct: 1422 IPRSPAELSHLIMSQAGEFVRMNVKEK--------SPRTGECAVWRRPPLNFVKINTDGA 1473
Query: 3628 FNPQSLIAGLSITRNYARQYVVGKGAIKRAI--NVHQAEAWALLEAMDMASTHGWTQVIF 3801
++ G V+ GA A + AE A A+ AS G +++
Sbjct: 1474 YSSNMKQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIEL 1533
Query: 3802 ETDNL 3816
ETD++
Sbjct: 1534 ETDSM 1538
>ref|XP_008367096.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 924
Score = 213 bits (541), Expect = 1e-51
Identities = 138/571 (24%), Positives = 247/571 (43%), Gaps = 23/571 (4%)
Frame = +1
Query: 2245 ILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMDKIQRKYWW 2424
+ D++ ++QGW+ T++ + + V+ ++ Y M +FK P + ++D I +WW
Sbjct: 315 VKDRVLEKVQGWKQSTLSSAGKEVLIKAVIQAIPAYPMNIFKFPANFCNELDSIISNFWW 374
Query: 2425 NNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDALYGRILKG 2604
+ + + S M +PK GGLG + ++N A LAK W L H++ +L+ R++K
Sbjct: 375 GHNGNKRRIHWVSKNIMGLPKAEGGLGFRSFRDFNDALLAKQCWRLLHDKHSLWARVMKA 434
Query: 2605 KYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTANWIPSM-- 2778
+YFP + + W W SL G ++++ + Q+ +G + +W W+P++
Sbjct: 435 RYFP--HCSFLDAKRGGRASWAWSSLLSGRDLLLBESHWQIFNGKXVRVWLDRWLPTLPV 492
Query: 2779 ASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD-HPDTL 2955
L D + + VS L+ W+I+ L+ ++ + +I I + D L
Sbjct: 493 GHPLPRGD-VQVSRNTPVSXLLSPEXDGWDIDFLKPFISAXEFVAIQETQIGVPCLDDRL 551
Query: 2956 IWHFTTAGIFTNSSTYKMLCAK-----DSPNDVSLNLSQSFWLKFWKLKMPYKFQIFLWK 3120
+W F G++T S Y + AK + + S+ + W W L P K ++FLWK
Sbjct: 552 VWPFDRXGLYTVKSGYHCVHAKREQRVNFGSSSSVTVPGKLWKAIWNLNTPPKLRVFLWK 611
Query: 3121 GLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKSLPQYFSSIV 3300
+HNAL A LFR + C +C E ++HL L CP+ + +W F ++
Sbjct: 612 TVHNALATLAGLFRRLVAPSPLCPICQI-HEETIEHLFLLCPWVEVIW-------FGGML 663
Query: 3301 QHSTLLSWIQSWQ------IQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSNLNPNP 3462
H + S I SW + RC +F N + NP
Sbjct: 664 SHRIIRSSISSWVNWLVNITNTTLNSKAEMXRVLSYVAFTCWHIWKSRCNFLFQNGSINP 723
Query: 3463 NTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKN-------TWRPPPMDVLKVNID 3621
V+ I DT V + +R ++ N W PP +K+N+D
Sbjct: 724 RNVLAAI---------DTSVSAFSEASRNKVIRPSMPNPAAQVPARWCLPPPPFVKINVD 774
Query: 3622 ASFNPQSLIAGLS--ITRNYARQYVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQV 3795
AS+ +G S + R+ A ++ + A + EA A+ ++ G+ +
Sbjct: 775 ASWE-XGTXSGFSGVVVRDSAGTFIAARRGCFAAHSAAVXEAIAIRHGCELGVAMGFNLI 833
Query: 3796 IFETDNLNIXXXXXXXXXXXXWQSLPILRKC 3888
+ E+D+ + W++ P+L KC
Sbjct: 834 VIESDSQDSISYLMGKTSNGRWEAFPVLTKC 864
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 213 bits (541), Expect = 1e-51
Identities = 149/545 (27%), Positives = 241/545 (44%), Gaps = 13/545 (2%)
Frame = +1
Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
SR + + ++I+ R+QGW+ K +++ + + V ++ + M F++ Q+
Sbjct: 989 SRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQIS 1048
Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
K+ KYWW+N + + SW K+ +PK GGLG + + +N A LAK W L + D+
Sbjct: 1049 KMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDS 1108
Query: 2581 LYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTA 2760
L R+L+ KYFP D + P T N + W+S+ GL+++ ++GDGS INIW
Sbjct: 1109 LCSRVLRAKYFPLGDC--FRPKQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWAD 1166
Query: 2761 NWIPSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD 2940
WIP S + + + V ELI+ W+ +LL Q F E V +I + + ++
Sbjct: 1167 PWIPRGWSR-KPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE 1225
Query: 2941 HPDTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVSLN----------LSQSFWLKFWKLKM 3090
D L WHF G FT S YK+ ++ S N FW K WKL +
Sbjct: 1226 MEDVLAWHFDARGCFTVKSAYKV--QREMERRASRNGCPGVSNWESGDDDFWKKLWKLGV 1283
Query: 3091 PYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRK 3270
P K + FLW+ HN L ++A L D +CV+C +ED HL C + VW+
Sbjct: 1284 PGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGR-YNEDAGHLFFKCKPVKKVWQA 1342
Query: 3271 -SLPQYFSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSN 3447
+L + S + Q ++ + +QS + R +V
Sbjct: 1343 LNLEELRSMLEQQTSGKNVLQSIYCRPE--------IERTSAIVCLWQWWKERNEVREGG 1394
Query: 3448 LNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDAS 3627
+ +P + H I V + S R WR PP++ +K+N D +
Sbjct: 1395 IPRSPAELSHLIMSQAGEFVRMNVKEK--------SPRTGECAVWRRPPLNFVKINTDGA 1446
Query: 3628 FNPQSLIAGLSITRNYARQYVVGKGAIKRAI--NVHQAEAWALLEAMDMASTHGWTQVIF 3801
++ G V+ GA A + AE A A+ AS G +++
Sbjct: 1447 YSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIEL 1506
Query: 3802 ETDNL 3816
ETD++
Sbjct: 1507 ETDSM 1511
>ref|XP_009375083.1| PREDICTED: uncharacterized protein LOC103963932 [Pyrus x
bretschneideri]
Length = 1815
Score = 208 bits (529), Expect = 4e-50
Identities = 145/582 (24%), Positives = 255/582 (43%), Gaps = 27/582 (4%)
Frame = +1
Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
S+++ + ++ +LQGW+ T+++ + + V+ ++ Y M +FK P + +++D
Sbjct: 1198 SKKRGLAYVKGRVMEKLQGWKQNTLSRAGKEVLIKAVIQAIPAYPMCIFKFPGAVCKELD 1257
Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
+ +WW H + S + +PK GGLG ++ +N A LAK W L D+
Sbjct: 1258 ALVAGFWWGCKEGAHKIHWVSKGVLGLPKDMGGLGFRNFQEFNEALLAKQCWRLITEPDS 1317
Query: 2581 LYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTA 2760
L+ +++K +YFP + + + W W SL G ++ E + Q+ G + +W
Sbjct: 1318 LWAKVIKARYFPHSSI--WDAKKGGRASWAWSSLICGRGLVREGSHWQILGGQEVRVWQD 1375
Query: 2761 NWIPSMASALQHWD---ELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSI-LTNL 2928
W+PS+ L H + ++ + VS LI + +WNIN L+ + E + +I T L
Sbjct: 1376 RWLPSL--PLGHPEPVGQVAVTPSLRVSALICPESGRWNINFLQPFISEEAMQAIEETPL 1433
Query: 2929 IQLDHPDTLIWHFTTAGIFTNSSTY-----KMLCAKDSPNDVSLNLSQSFWLKFWKLKMP 3093
L D LIW + G ++ S Y + L +D + ++FW WKL++P
Sbjct: 1434 GDLSRKDRLIWDTSKNGAYSVKSGYRWLQGRSLVRRDLRRPSVRGVPKAFWKGIWKLEVP 1493
Query: 3094 YKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVW--- 3264
K + FLW +HN L + LFR S+ C +C E ++H+ L C + + +W
Sbjct: 1494 PKLRHFLWLTVHNCLPTRDALFRRRSSQTSTCPIC-CCHDETIEHIFLSCSWVEPIWFGG 1552
Query: 3265 -------RKSLPQY-------FSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXX 3402
R SLP + FS + +S + W QS+ +
Sbjct: 1553 ALGYKMDRPSLPSWSDWIQGVFSPNLCNSGDIMWRQSYIV------------------FT 1594
Query: 3403 XXXXXXXRCKVIFSNLNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTW 3582
RC +F + NP V+ IS +V + RN+ W
Sbjct: 1595 CWCIWKARCDFVFKEVPINPLKVLAAISE--AVRSFISAKAKDGERGGGEGRRNSQVTRW 1652
Query: 3583 RPPPMDVLKVNIDASFNPQSLIAGLS-ITRNYARQYVVGKGAIKRAINVHQAEAWALLEA 3759
P +K+N+DAS++ S + + I R+ ++V A + AEA+ALL
Sbjct: 1653 CAPTYPFVKINVDASWSKASKMGFVGVIVRDMESKFVAAARHPINAPSAAAAEAYALLHG 1712
Query: 3760 MDMASTHGWTQVIFETDNLNIXXXXXXXXXXXXWQSLPILRK 3885
+ + G VI E+D+L+ W++ P+L +
Sbjct: 1713 CRLGAELGVRYVILESDSLDAIKCLSSSLSMGSWEAYPVLAR 1754
Score = 82.4 bits (202), Expect = 3e-12
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Frame = +1
Query: 1594 SMKIFCWNCQGIGNPHTRDYLKFCLHQYEPDIFFLSETKA*PNNMRFYLSHTRYPHYWFY 1773
+M WNC+G+G+ T L + + P + FLSETK + + Y H +
Sbjct: 435 AMSYIFWNCRGLGSNTTVRALHGLIRKKRPSMIFLSETKMKDHRILGVRRRLGYVHGFDV 494
Query: 1774 PAIGLSGGIALAWKNGVDVEIMHTTSDTIFAIIHTHDHNSDFLVTFMYGAYNVVDNNNQW 1953
IG +GG++L W++ ++V I+ ++ TI A++ T +YG V+ N W
Sbjct: 495 SPIGSAGGLSLWWEDNLEVNIIFSSKHTIDAVMRIKGQTHWSRFTGVYGTPYRVEKNLFW 554
Query: 1954 QYLLDMHSSVDLPWALLGDLN-FXXXXXXXXXXXXXXXXXNNIINFVQQLGLIDLGYVGS 2130
+++++ + D+PW GD N F + F+ LIDLG+ G
Sbjct: 555 EWMVNYFTPTDIPWICGGDFNEFLWDHEKSGGVEVLYNRPRFLEEFLSSSQLIDLGFNGP 614
Query: 2131 DSTW 2142
TW
Sbjct: 615 AFTW 618
>ref|XP_008225175.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 583
Score = 207 bits (528), Expect = 5e-50
Identities = 140/518 (27%), Positives = 232/518 (44%), Gaps = 10/518 (1%)
Frame = +1
Query: 2356 MQVFKIPDSTIQQMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAA 2535
M F+ P+ T +++ +WW N + + SW+K+ V K+ GGLG + LS++N A
Sbjct: 1 MTCFRFPEGTCNEINSDLANFWWGNSTEGNGLHWKSWKKLGVSKKSGGLGFRDLSSFNLA 60
Query: 2536 FLAKMSWNLTHNQDALYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENA 2715
LAK +W + N +++ +IL+ +YFP + S W W SL G ++ A
Sbjct: 61 LLAKQAWRIVQNPQSIWAQILQARYFP--HCNFLQAKKGSRSSWAWASLIEGRDALLMEA 118
Query: 2716 K*QVGDGSTINIWTANWI-PSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLF 2892
K Q+ +G+T NIW NWI S + ++ + + Q V E+++ WN++L+
Sbjct: 119 KFQIFNGATTNIWKDNWISASNSGVIKPTCPVPITAPQLVCEIMDKPNHSWNLDLIADCL 178
Query: 2893 TSEQVNSILTNLIQLD-HPDTLIWHFTTAGIFTNSSTY-KMLCAKDSP----NDVSLNLS 3054
E +N I + I L PD L+W + G F+ S Y + +K+ P S ++
Sbjct: 179 DRETINLIRSTPISLSPRPDRLVWPWNPDGSFSVRSGYHRFHTSKNGPLLQHTYSSHSVD 238
Query: 3055 QSFWLKFWKLKMPYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLL 3234
W W +K K + FLW+ + A++ + LFR ++ C +CN E V+H+L
Sbjct: 239 AKVWKVIWNIKTLPKIKHFLWRAISGAISSRLALFRRKLVTNPLCPICNC-FEESVEHIL 297
Query: 3235 LHCPFAQAVWRKSLPQYFSSIVQHSTLLSWIQSW-QIQDSPXXXXXXXXXXXXXXXXXXX 3411
CP+ VW S+ Y +TL W+ I D+P
Sbjct: 298 FLCPWTHPVWFGSVFSYRIIPNAFTTLDRWLHDMLSIPDTP--HEDFLHRFSLLSFLCWE 355
Query: 3412 XXXXRCKVIFSNLNPNPNTVIHQIS-YYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRP 3588
RC +F NP+P VI + + Y +T S S ++ W P
Sbjct: 356 IWKARCDFVFKGTNPDPRLVIKRANDSYSEFWEANTCFSRLSGSRTSPSSPYVGRDRWLP 415
Query: 3589 PPMDVLKVNIDASFNPQSLIAGLS-ITRNYARQYVVGKGAIKRAINVHQAEAWALLEAMD 3765
PP + +K+N D +++P + + I R+ + G + + AEA A L A+
Sbjct: 416 PPANAIKINFDGAWSPGTSHGSIGVIARDDCGTWRGGTASPISCNSALVAEAAAALYAVS 475
Query: 3766 MASTHGWTQVIFETDNLNIXXXXXXXXXXXXWQSLPIL 3879
A T +++V+FE+D+ W LPIL
Sbjct: 476 YAITRDFSKVVFESDSKVFVDSILGNHGNYSWTILPIL 513
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 206 bits (524), Expect = 1e-49
Identities = 117/374 (31%), Positives = 183/374 (48%), Gaps = 10/374 (2%)
Frame = +1
Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
SR + + ++I+ R+QGW+ K +++ + + V + + M F++ Q+
Sbjct: 961 SRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQIS 1020
Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
K+ KYWW+N + + SW K+ +PK GGLG + + +N A LAK W L + D+
Sbjct: 1021 KMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDS 1080
Query: 2581 LYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTA 2760
L R+L+ KYFP D + P T N + W+S+ GL+++ +VGDGS INIW
Sbjct: 1081 LCSRVLRAKYFPLGDC--FRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWAD 1138
Query: 2761 NWIPSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD 2940
WIP S + + + V ELI+ W+ +LL Q F E V +I + + ++
Sbjct: 1139 PWIPRGWSR-KPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE 1197
Query: 2941 HPDTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVSLN----------LSQSFWLKFWKLKM 3090
D L WHF G FT S YK+ ++ S N FW K WKL +
Sbjct: 1198 MEDVLAWHFDARGCFTVKSAYKV--QREMERRASRNGCPGVSNWESGDDDFWKKLWKLGV 1255
Query: 3091 PYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRK 3270
P K + FLW+ HN L ++A L D +CV+C +ED HL C + VW+
Sbjct: 1256 PGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGR-YNEDAGHLFFKCKPVKKVWQA 1314
Query: 3271 SLPQYFSSIVQHST 3312
+ S+++ T
Sbjct: 1315 LNLEELRSMLEQQT 1328
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 206 bits (524), Expect = 1e-49
Identities = 117/374 (31%), Positives = 183/374 (48%), Gaps = 10/374 (2%)
Frame = +1
Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
SR + + ++I+ R+QGW+ K +++ + + V + + M F++ Q+
Sbjct: 957 SRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQIS 1016
Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
K+ KYWW+N + + SW K+ +PK GGLG + + +N A LAK W L + D+
Sbjct: 1017 KMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDS 1076
Query: 2581 LYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTA 2760
L R+L+ KYFP D + P T N + W+S+ GL+++ +VGDGS INIW
Sbjct: 1077 LCSRVLRAKYFPLGDC--FRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWAD 1134
Query: 2761 NWIPSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD 2940
WIP S + + + V ELI+ W+ +LL Q F E V +I + + ++
Sbjct: 1135 PWIPRGWSR-KPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE 1193
Query: 2941 HPDTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVSLN----------LSQSFWLKFWKLKM 3090
D L WHF G FT S YK+ ++ S N FW K WKL +
Sbjct: 1194 MEDVLAWHFDARGCFTVKSAYKV--QREMERRASRNGCPGVSNWESGDDDFWKKLWKLGV 1251
Query: 3091 PYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRK 3270
P K + FLW+ HN L ++A L D +CV+C +ED HL C + VW+
Sbjct: 1252 PGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGR-YNEDAGHLFFKCKPVKKVWQA 1310
Query: 3271 SLPQYFSSIVQHST 3312
+ S+++ T
Sbjct: 1311 LNLEELRSMLEQQT 1324
>ref|XP_008226782.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 963
Score = 206 bits (523), Expect = 2e-49
Identities = 138/564 (24%), Positives = 243/564 (43%), Gaps = 10/564 (1%)
Frame = +1
Query: 2218 WSRQQNSK--GILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQ 2391
W R + + I D++ +++GW+ +++ + + V +++ Y M FK P S
Sbjct: 338 WGRSKRAALDYIKDRVRRKIEGWKQSSLSLAGKEILLKAVATAIPAYPMSCFKFPASVCS 397
Query: 2392 QMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHN 2571
++ ++WW N + +W+ + K GGLG +H S++N A LAK SW + N
Sbjct: 398 DINGEMTRFWWKNGEEGSKIHWKAWESLCKSKDEGGLGFRHFSSFNIALLAKQSWRILQN 457
Query: 2572 QDALYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINI 2751
+A + RILK +Y+P D + + W W SL G ++++++ Q+ DG NI
Sbjct: 458 PNASWVRILKARYYP--DCDFLKAKKGSRASWAWSSLLEGRDALIKDSRCQIFDGKNTNI 515
Query: 2752 WTANWIPSMASALQHWDELHLHDL-QWVSELIELSAAQWNINLLRQLFTSEQVNSI-LTN 2925
W W+P + E+ Q V E++E W + L++ + I
Sbjct: 516 WKDIWLPPPHDGIIKVREIVPPSAPQQVYEIMEKETHSWKLELIKPYVQPRTLEIIRCCT 575
Query: 2926 LIQLDHPDTLIWHFTTAGIFTNSSTYKMLCAKDS-----PNDVSLNLSQSFWLKFWKLKM 3090
+ + D ++W +TT G ++ S Y+ + ++ S S ++ + W+ WK++
Sbjct: 576 IANTERQDKMVWPWTTNGAYSVKSRYRRIHSRCSYLIHATGSTSHSIPKEVWVCIWKIES 635
Query: 3091 PYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRK 3270
K ++FLW+ L NA++ + L+R C +C E ++HLL CP+ VW
Sbjct: 636 LPKIKMFLWRVLSNAISTRWNLYRRKILDSPVCPICGM-EEETIEHLLFLCPWTNVVWFG 694
Query: 3271 SLPQYFSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSNL 3450
+ Y + S++ W++ I RC IF +
Sbjct: 695 APLNYKVDLRGFSSVDRWLKG-VINFQGVSKREVQFLLTSISFICWEIWKTRCNFIFKSN 753
Query: 3451 NPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDASF 3630
+ +P I + LD V + + V N L WRPP + +K+N D ++
Sbjct: 754 HIDPRLTIDRAMQNCR-EFLDAKVKSHVPFGDASVVPNILAQGWRPPMSNYVKINFDGAW 812
Query: 3631 NPQSLIAGLSITRNYARQYVVGKGAIKRAINVH-QAEAWALLEAMDMASTHGWTQVIFET 3807
S +AGL + A G A N+ AEA A L A+ A H +T +I ET
Sbjct: 813 KKDSHLAGLGVVARDAIGSFCGGLATPFHCNLALVAEAAAGLCALKFALNHNFTNIILET 872
Query: 3808 DNLNIXXXXXXXXXXXXWQSLPIL 3879
++ + W P+L
Sbjct: 873 NSKILVEGVRGGGKNGVWAIQPLL 896
>ref|XP_008352230.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 775
Score = 200 bits (508), Expect = 1e-47
Identities = 140/573 (24%), Positives = 244/573 (42%), Gaps = 15/573 (2%)
Frame = +1
Query: 2218 WSRQQNS--KGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQ 2391
W R + + + ++ +LQGW+ T++Q R + V ++ Y M +FK P S
Sbjct: 89 WGRSKKAGLAYVKGRLLDKLQGWKKSTLSQAGREILIKAVAQAIPAYPMNLFKFPVSFCN 148
Query: 2392 QMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHN 2571
+MD + K WW ++ + S +++ K GGLGL+ S N A LAK W L
Sbjct: 149 EMDALIAKXWWGQKLGENRIHWVSXERLGRSKEEGGLGLRSFSIXNDALLAKQCWRLISE 208
Query: 2572 QDALYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINI 2751
+ L+ +LK +YFP + + + W+W SL +I+ A Q+ DG+ +
Sbjct: 209 PNTLWALVLKARYFP--NCSFLDAKKGGRASWVWASLLAXREILRAGAHWQIMDGNDTRV 266
Query: 2752 WTANWIPSMASALQH-WDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNL 2928
W WIP + + + V LI + +W+++ L+ +V IL
Sbjct: 267 WVDRWIPPIPLGRPSPLGSVXVSKNLKVKSLICPVSGEWDLDFLKPFLADSEVEXILD-- 324
Query: 2929 IQLDHP---DTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVS----LNLSQSFWLKFWKLK 3087
+ P D L+W F G ++ S Y + +++ + W WKLK
Sbjct: 325 LHTGDPTLKDRLVWPFEKRGSYSVKSGYYWSLNRSQVRCQQSIRLVSIPSTLWKTVWKLK 384
Query: 3088 MPYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWR 3267
+P K + F+WK LH AL L+ S+ C +CN+ E ++HL L CP + VW
Sbjct: 385 VPPKIRTFMWKTLHAALATMKNLYIRRSSPSPTCXLCNS-FDESIEHLFLFCPXVEVVWF 443
Query: 3268 KSLPQYFSSIVQHSTLLSW-IQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFS 3444
+ Q S+ SW +Q + ++ RC+ F+
Sbjct: 444 GGRLNLRPNRQQVSSWASWLVQMGEAENGSAEVRIDRISYIAFTCWHXWKS--RCEFQFN 501
Query: 3445 NLNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDA 3624
N P+ V+ + + + +S +L + S+ + W PP V+K+N+ A
Sbjct: 502 NQVIYPSRVVAXVXRSVXDYQGTIFRXSSRSLLNQXSLGAGVX--WSPPDHGVIKINVXA 559
Query: 3625 SFNPQSLIAGLSITRNYARQ----YVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQ 3792
S+ +S G+ T AR ++ + AEA A++ ++ ++GW
Sbjct: 560 SWEAKS---GVGFTGVVARDEQGCFLAASRHKIKXTGAXMAEALAIMHGCNLGVSNGWNS 616
Query: 3793 VIFETDNLNIXXXXXXXXXXXXWQSLPILRKCM 3891
+ E+D+ + W + P+LRKC+
Sbjct: 617 ICVESDSYDAISCLRDPAKKGNWDAFPVLRKCL 649
>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
Length = 560
Score = 199 bits (507), Expect = 1e-47
Identities = 107/351 (30%), Positives = 183/351 (52%), Gaps = 10/351 (2%)
Frame = +1
Query: 2251 DKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMDKIQRKYWWNN 2430
D+I+ R+QGW+ K +++ + + V ++ + M F + +Q+ K+ +YWW+N
Sbjct: 9 DRIWQRIQGWKEK-LSRTGKEVLIKAVAQAIPTFAMGCFDLTKDICEQISKMIARYWWSN 67
Query: 2431 YNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDALYGRILKGKY 2610
++ + SW+K+ PK GGLG + + +N A LAK W L N ++L ++LK KY
Sbjct: 68 QEKENKMHWLSWEKLTEPKWAGGLGFRDIHAFNLAMLAKQGWRLIQNPESLCAQVLKAKY 127
Query: 2611 FPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTANWIPSMASAL 2790
+P ++ + N + W+S+C GL + + +VG+G+ INIW+ WIPS
Sbjct: 128 YPSGNI--FSAKKCANMSYTWRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPS-DHTR 184
Query: 2791 QHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLDHPDTLIWHFT 2970
+ + + V ELI+ S W++ LL Q F E VN I T + ++ D L WH+
Sbjct: 185 RPITPRGRNLVTRVEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMDDMLAWHYD 244
Query: 2971 TAGIFTNSSTYKMLCAKDSP----NDVSLNLS------QSFWLKFWKLKMPYKFQIFLWK 3120
G+F+ S YK+ +D S LS + +W K WK+++P K + F+W+
Sbjct: 245 EKGLFSVKSAYKV--QRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWR 302
Query: 3121 GLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKS 3273
HN L ++ L + D +C++CN +ED HL C + VW+++
Sbjct: 303 FSHNILALRVNLQQRGMDLDSRCIICNR-MNEDAGHLFFKCKKVKKVWQEN 352
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 199 bits (507), Expect = 1e-47
Identities = 107/351 (30%), Positives = 183/351 (52%), Gaps = 10/351 (2%)
Frame = +1
Query: 2251 DKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMDKIQRKYWWNN 2430
D+I+ R+QGW+ K +++ + + V ++ + M F + +Q+ K+ +YWW+N
Sbjct: 902 DRIWQRIQGWKEK-LSRTGKEVLIKAVAQAIPTFAMGCFDLTKDICEQISKMIARYWWSN 960
Query: 2431 YNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDALYGRILKGKY 2610
++ + SW+K+ PK GGLG + + +N A LAK W L N ++L ++LK KY
Sbjct: 961 QEKENKMHWLSWEKLTEPKWAGGLGFRDIHAFNLAMLAKQGWRLIQNPESLCAQVLKAKY 1020
Query: 2611 FPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTANWIPSMASAL 2790
+P ++ + N + W+S+C GL + + +VG+G+ INIW+ WIPS
Sbjct: 1021 YPSGNI--FSAKKCANMSYTWRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPS-DHTR 1077
Query: 2791 QHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLDHPDTLIWHFT 2970
+ + + V ELI+ S W++ LL Q F E VN I T + ++ D L WH+
Sbjct: 1078 RPITPRGRNLVTRVEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMDDMLAWHYD 1137
Query: 2971 TAGIFTNSSTYKMLCAKDSP----NDVSLNLS------QSFWLKFWKLKMPYKFQIFLWK 3120
G+F+ S YK+ +D S LS + +W K WK+++P K + F+W+
Sbjct: 1138 EKGLFSVKSAYKV--QRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWR 1195
Query: 3121 GLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKS 3273
HN L ++ L + D +C++CN +ED HL C + VW+++
Sbjct: 1196 FSHNILALRVNLQQRGMDLDSRCIICNR-MNEDAGHLFFKCKKVKKVWQEN 1245
>ref|XP_008385035.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 992
Score = 199 bits (506), Expect = 2e-47
Identities = 140/573 (24%), Positives = 245/573 (42%), Gaps = 15/573 (2%)
Frame = +1
Query: 2218 WSRQQNS--KGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQ 2391
W R + + + ++ +LQGW+ T++Q R + V ++ Y M +FK P S
Sbjct: 373 WGRSKKAGLAYVKGRLLDKLQGWKKSTLSQXGREILIKXVAQAIPAYPMNLFKFPVSFCN 432
Query: 2392 QMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHN 2571
+MD + K WW ++ + S +++ K GLGL+ S N A LAK W L
Sbjct: 433 EMDALIAKXWWGXXLGENRIHWVSXERLGRSKEEXGLGLRSFSIXNDALLAKQCWRLIXE 492
Query: 2572 QDALYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINI 2751
+ L+ +LK +YFP + + + W+W SL +I+ A Q+ DG+ +
Sbjct: 493 PNTLWALVLKARYFP--NCSFLDAKKGGRASWVWASLLAXREILRAGAHWQIMDGNDTRV 550
Query: 2752 WTANWIPSMASALQH-WDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNL 2928
W WIP + + + V LI + +W+++ L+ +V IL
Sbjct: 551 WVDRWIPPIPLGRPSPLGSVXVSKNLKVKSLICPVSGEWDLDFLKPFLADSEVEXILD-- 608
Query: 2929 IQLDHP---DTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVS----LNLSQSFWLKFWKLK 3087
+ P D L+W F G ++ S Y + +++ + W WKLK
Sbjct: 609 LHTGDPTLKDRLVWPFEKRGSYSVKSGYYWSLNRSQVRCQQSIRLVSIPSTLWKTVWKLK 668
Query: 3088 MPYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWR 3267
+P K + F+WK LH AL L+ S+ C +CN+ E ++HL L CP + VW
Sbjct: 669 VPPKIRTFMWKTLHAALATMKNLYIRRSSPSPTCXLCNS-FDESIEHLFLFCPXVEVVWF 727
Query: 3268 KSLPQYFSSIVQHSTLLSW-IQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFS 3444
+ Q S+ SW +Q + ++ RC+ F+
Sbjct: 728 GGRLNLRPNRQQVSSWASWLVQMGEAENGSAEVRIDRISYIAFTCWHXWKS--RCEFQFN 785
Query: 3445 NLNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDA 3624
N P+ V+ + + + +S +L + S+ ++ W PP V+K+N+ A
Sbjct: 786 NQVIYPSRVVAXVXRSVXDYQGTIFRXSSRSLLNQSSLGAGVQ--WSPPDHGVIKINVXA 843
Query: 3625 SFNPQSLIAGLSITRNYARQ----YVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQ 3792
S+ +S G+ T AR ++ +A AEA A++ ++ ++GW
Sbjct: 844 SWEAKS---GVGFTGVVARDEQGCFLAASRHKIKATGAXMAEALAIMHGCNLGVSNGWNS 900
Query: 3793 VIFETDNLNIXXXXXXXXXXXXWQSLPILRKCM 3891
+ E+D+ + W + P+LRKC+
Sbjct: 901 ICVESDSYDAISCLRDPAKKGNWDAFPVLRKCL 933
>ref|XP_007210228.1| hypothetical protein PRUPE_ppa015539mg [Prunus persica]
gi|462405963|gb|EMJ11427.1| hypothetical protein
PRUPE_ppa015539mg [Prunus persica]
Length = 787
Score = 198 bits (504), Expect = 3e-47
Identities = 110/357 (30%), Positives = 179/357 (50%), Gaps = 9/357 (2%)
Frame = +1
Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
SR+Q + ++I+ ++QGW++K ++ + + V ++ +Y M F IP ++
Sbjct: 355 SRRQCFNSLKERIWKKIQGWKAKLLSFAGKEILLKVVAQAVPIYMMNCFLIPKCLCDEIQ 414
Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
++ YWW + Q + SW K+ +PK+ GGLG ++L +N A LAK W L ++
Sbjct: 415 QVMAHYWWGEQDGQRKIHWLSWNKLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNS 474
Query: 2581 LYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTA 2760
L RILK +YF + + ++WQSLC +I + ++ ++G+G ++ IW
Sbjct: 475 LVARILKARYFK--NCSILEAQIGHSPSYIWQSLCKARVLIEKGSRWRIGNGHSVRIWGD 532
Query: 2761 NWIPSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD 2940
W+P+ S + D V+ LI QW NLL+ F++E+VN I +
Sbjct: 533 RWLPNSESFQVSSPQAEGFDEAKVNSLINPVTVQWKENLLQAWFSAEEVNCIRNIPLSFR 592
Query: 2941 H-PDTLIWHFTTAGIFTNSSTYKM---LCAKDSPNDVSLN-----LSQSFWLKFWKLKMP 3093
H PD LIWHF G +T S +++ + + +D ++N + W K WK ++P
Sbjct: 593 HPPDILIWHFERDGQYTVRSGHEVARRVLLRQDGDDTNMNGGPIVACEQVWKKIWKARVP 652
Query: 3094 YKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVW 3264
K IF+W+ L N L K L + CV C G E V H+LL CP A A W
Sbjct: 653 PKVLIFIWRALLNILPTKDNLIHRSISELGGCVFC--GAEETVAHVLLRCPMAIASW 707
>ref|XP_010054376.1| PREDICTED: uncharacterized protein LOC104442671 [Eucalyptus grandis]
Length = 1509
Score = 198 bits (503), Expect = 4e-47
Identities = 149/572 (26%), Positives = 238/572 (41%), Gaps = 17/572 (2%)
Frame = +1
Query: 2245 ILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMDKIQRKYWW 2424
IL ++ +++GW+ +++ + + TV+ ++ Y M VFKIP S + ++K ++WW
Sbjct: 905 ILGRVNSKMEGWKENLISKGGKEVLIKTVVQAIPQYVMSVFKIPISICKSIEKKIARFWW 964
Query: 2425 NNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDALYGRILKG 2604
N + + W +K K GGLG + L +N A L K +W L +L+ ++ K
Sbjct: 965 QNDCRKAGIHWKQWDVLKYTKALGGLGFRDLVAFNKAMLGKQAWRLIQQPSSLWSKLFKA 1024
Query: 2605 KYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTANWIP-SMA 2781
YFP D +Y W WQSL ++I+ N + VGDG INI W+P +
Sbjct: 1025 IYFPAQDFRYAHKG--VRPSWGWQSLLSSREVILPNLQWSVGDGKNINIREDRWLPRGIV 1082
Query: 2782 SALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSIL-----TNLIQLDHP 2946
+ +E L V+EL+ ++ WN+ L + + IL NL Q
Sbjct: 1083 GGPANREEPSL-----VAELLVQNSNHWNLATLNNFYDEQTTAEILRIPVRRNLTQ---- 1133
Query: 2947 DTLIWHFTTAGIFTNSSTY-----KMLCAKDSPNDVSLNLSQSFWLKFWKLKMPYKFQIF 3111
D L+W TT G +T S Y +C S W W +K+P K ++F
Sbjct: 1134 DKLVWTETTNGQYTIRSAYHSVRKASICKLTRQASSSYQQPPQLWKCIWSVKLPPKLKVF 1193
Query: 3112 LWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKSLPQYFS 3291
W HNAL K LFR T D C +C E ++HL L CP+ A+W S P
Sbjct: 1194 FWSVCHNALPTKENLFRRRITPDPICPLCTLNQPESIEHLFLLCPWTTAIW--SHPTI-- 1249
Query: 3292 SIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSNLNPNPNTV 3471
+I +T + I W + R IFS P+P
Sbjct: 1250 NIHIDTTTVRRIDEWIV--DRILHKKSKPDLELFIAVCWQVWKARNGAIFSKHQPDP--- 1304
Query: 3472 IHQISYYISVHHLDTVVDNSHTLHHSLSVRNA----LKNTWRPPPMDVLKVNIDASFNPQ 3639
+ VH V ++ HSL + L + W+PP L++NID ++
Sbjct: 1305 ------HFGVHAAFAQVRSAAICDHSLMTKPKQSVDLGHFWQPPAPGTLRINIDGAYTSG 1358
Query: 3640 SLIAGLS-ITRNYARQYVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQVIFETD-N 3813
++ I R+ + G +A + Q EA AL+ A+ G E D +
Sbjct: 1359 HTEGSIAFICRDKSGCLQEGLTRSVQAASALQTEAQALIFALCHLLQQGKMSTSLEIDSD 1418
Query: 3814 LNIXXXXXXXXXXXXWQSLPILRKCMNQCWEF 3909
+ W+ P++ + ++ C +F
Sbjct: 1419 CLLLVDALNNQQEPPWEIRPLVYEAVDLCRQF 1450
>ref|XP_008346916.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 1007
Score = 197 bits (500), Expect(2) = 7e-47
Identities = 137/546 (25%), Positives = 237/546 (43%), Gaps = 13/546 (2%)
Frame = +1
Query: 2218 WSRQQNS--KGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQ 2391
W R +N + +I +LQGW+ T+++ + + V+ ++ Y M +FK P
Sbjct: 370 WGRXKNRGLAYVKGRIAGKLQGWKQSTLSKAGKEVLIKAVVQAIPAYPMNIFKFPAVVCD 429
Query: 2392 QMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHN 2571
+D + +WW + S + + +PK GG+G K +N A LAK W L
Sbjct: 430 DLDALVAGFWWGKAGGGGKIHWVSKEVLGLPKNIGGMGFKSFKEFNDALLAKQCWRLICE 489
Query: 2572 QDALYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINI 2751
++L+ R++K +YFP + + + W W SL G +I++ Q+ G + +
Sbjct: 490 PNSLWARVIKARYFP--HCSFLEASKGGRASWAWSSLLSGRDVILQGTHWQILGGEDVRV 547
Query: 2752 WTANWIPSMASALQHWDELH----LHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSI- 2916
W W+PS+ L H L +L+ V +L + +W++N L+ T + +I
Sbjct: 548 WVDRWLPSL--LLGHPVPLGXVAVTRNLR-VCKLFCPLSREWDLNFLQPFXTDVEXETIR 604
Query: 2917 LTNLIQLDHPDTLIWHFTTAGIFTNSSTY-----KMLCAKDSPNDVSLNLSQSFWLKFWK 3081
T + D LIW + G ++ S Y + LC +DS + ++ + W WK
Sbjct: 605 ATPIGDSSRRDRLIWAASKNGRYSVKSGYRWIQSRSLCLRDSRLPHARSVPEELWKCLWK 664
Query: 3082 LKMPYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAV 3261
+++P K + FLW LHNAL K LF+ +++ C +C E H+ L CP+ + V
Sbjct: 665 IEVPPKIRHFLWSSLHNALATKVNLFKRGASNSPICPIC-LCDDESTVHIFLLCPWVKHV 723
Query: 3262 WRKSLPQYFSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIF 3441
W + Y S+ W+Q+ + RC +F
Sbjct: 724 WFGGVLSYKVDGXAISSWFLWLQA-IFSSNFGAPDDGMWVRSCVAFTCWFIWKARCDFVF 782
Query: 3442 SNLNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNID 3621
+ + P+ V+ IS + L + + W PP K+N+D
Sbjct: 783 NXVKIIPSRVVXAISSAMDSFLAAGRSXEVCGLRXGVGQASXPVVCWTPPDPPFSKINVD 842
Query: 3622 ASFNPQSLIAGLS-ITRNYARQYVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQVI 3798
AS+ SL+ + + R+ Q++ +A N AEA ALL + T G ++VI
Sbjct: 843 ASWCRMSLVGFVGVVVRSAEGQFIAAARYSIKASNAAAAEALALLHGCKLGVTLGLSEVI 902
Query: 3799 FETDNL 3816
E+D+L
Sbjct: 903 IESDSL 908
Score = 21.9 bits (45), Expect(2) = 7e-47
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 2147 KHLFDL---FGQASVQVISMQKYTIFFGLDS 2230
+HL L + AS Q ++MQK +++FG ++
Sbjct: 310 RHLVKLLRDYCDASGQEVNMQKSSMYFGANT 340