BLASTX nr result

ID: Papaver30_contig00038338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00038338
         (3924 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008244613.1| PREDICTED: putative ribonuclease H protein A...   226   2e-55
ref|XP_008233458.1| PREDICTED: putative ribonuclease H protein A...   222   2e-54
ref|XP_008245529.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   221   4e-54
ref|XP_010673168.1| PREDICTED: uncharacterized protein LOC104889...   216   1e-52
ref|XP_008378657.1| PREDICTED: putative ribonuclease H protein A...   215   3e-52
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   214   4e-52
ref|XP_008367096.1| PREDICTED: putative ribonuclease H protein A...   213   1e-51
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   213   1e-51
ref|XP_009375083.1| PREDICTED: uncharacterized protein LOC103963...   208   4e-50
ref|XP_008225175.1| PREDICTED: putative ribonuclease H protein A...   207   5e-50
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   206   1e-49
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   206   1e-49
ref|XP_008226782.1| PREDICTED: putative ribonuclease H protein A...   206   2e-49
ref|XP_008352230.1| PREDICTED: putative ribonuclease H protein A...   200   1e-47
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...   199   1e-47
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...   199   1e-47
ref|XP_008385035.1| PREDICTED: putative ribonuclease H protein A...   199   2e-47
ref|XP_007210228.1| hypothetical protein PRUPE_ppa015539mg [Prun...   198   3e-47
ref|XP_010054376.1| PREDICTED: uncharacterized protein LOC104442...   198   4e-47
ref|XP_008346916.1| PREDICTED: putative ribonuclease H protein A...   197   7e-47

>ref|XP_008244613.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 930

 Score =  226 bits (575), Expect = 2e-55
 Identities = 155/572 (27%), Positives = 260/572 (45%), Gaps = 18/572 (3%)
 Frame = +1

Query: 2218 WSRQQNSK--GILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQ 2391
            W R +N+    I ++I  ++ GW+  +++   +   +  V +++  + M  F+ P+ T  
Sbjct: 304  WGRSKNAALGYIKERIRKKIDGWKLNSLSLAGKEVPLKVVATAVPAFPMTCFRFPEGTCN 363

Query: 2392 QMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHN 2571
            Q++     +WW N       +  SW+K+ + K+ GGLG + LSN+N A +AK SW +  N
Sbjct: 364  QINSDLASFWWGNNEESAGIHWKSWKKLCLAKKVGGLGFRDLSNFNLALIAKQSWRIILN 423

Query: 2572 QDALYGRILKGKYFPFFDLQYYPPADTKNSR--WLWQSLCYGLQIIMENAK*QVGDGSTI 2745
             +A + +ILK +YFP  D        TK SR  W W S   G + +M+ A+ Q+  G+  
Sbjct: 424  PEAAWVKILKARYFPTTDFL----NATKGSRPSWAWVSFLEGRKAMMKEARFQIFSGANT 479

Query: 2746 NIWTANWIPSMASA-LQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILT 2922
            NIW   WIPS  S  ++    +     Q V EL++     W ++ +     ++ + SI  
Sbjct: 480  NIWNDVWIPSCESGPVKTLQPIPPQAPQLVQELMDKQNHTWKLDSISTFINNDILQSI-- 537

Query: 2923 NLIQLDH---PDTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVSLN-----LSQSFWLKFW 3078
              I + H   PD L+W + ++G +T  S Y    A+ + +  S N     +S+  W   W
Sbjct: 538  RCIPIGHSSRPDRLVWPWNSSGSYTVKSGYHRFHARQNTDIASHNHSSHFVSEGVWKTIW 597

Query: 3079 KLKMPYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQA 3258
            K++   K ++FLW+ L   ++ +  LF+    +D  C +C  G  E V+H+L  CP+ Q 
Sbjct: 598  KVETLPKIKLFLWRALSGYISTRLALFKRKIATDPICPICE-GFEESVEHILFLCPWTQL 656

Query: 3259 VWRKSLPQYFSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVI 3438
            VW  S   Y     + ST   WI+   I                           RCK +
Sbjct: 657  VWFGSNLSYKVDPRRISTFDRWIEG-IISIPGTSRTDGDFLLSFLSFLCWEIWKARCKFV 715

Query: 3439 FSNLNPNPNTVI----HQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVL 3606
            F+ ++P+P  VI       S Y++V        N   +HH    R      W  P  + +
Sbjct: 716  FNGVSPDPRLVITHARDACSEYLAVVSKVDARGNLSPVHHVQGTR------WSKPGPNYV 769

Query: 3607 KVNIDASFNPQSLIAGLSI-TRNYARQYVVGKGAIKRAINVHQAEAWALLEAMDMASTHG 3783
            K N+D S+ P ++   + I +RN +  +  G  +    ++   AEA A L A+ +A   G
Sbjct: 770  KFNLDGSWLPGTMKGSIGIVSRNSSGDWCGGLASPLSCVSSLSAEAAAALCALHLAKNRG 829

Query: 3784 WTQVIFETDNLNIXXXXXXXXXXXXWQSLPIL 3879
              +VI ETD   +            W  LP++
Sbjct: 830  NMKVILETDCKVLLDGISGNHDNNSWAILPLI 861


>ref|XP_008233458.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 811

 Score =  222 bits (566), Expect = 2e-54
 Identities = 145/553 (26%), Positives = 250/553 (45%), Gaps = 10/553 (1%)
 Frame = +1

Query: 2251 DKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMDKIQRKYWWNN 2430
            +++   + GW+  T++   +   + +V +++  Y M  F+ P+ T  +++     +WW N
Sbjct: 194  ERVKKMIAGWKQNTLSMAGKEVLIKSVATAIPAYPMTCFRFPEGTCNEINSDLANFWWGN 253

Query: 2431 YNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDALYGRILKGKY 2610
                +  +  SW+K+ V K+ GGLG + LS++N A LAK +W +  N  +++ +IL+ +Y
Sbjct: 254  STEGNGLHWKSWKKLGVSKKSGGLGFRDLSSFNLALLAKQAWRIVQNPQSIWAQILQARY 313

Query: 2611 FPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTANWI-PSMASA 2787
            FP     +        S W W SL  G   ++  AK Q+ +G+T NIW  NWI  S +  
Sbjct: 314  FP--HCNFLQAKKGSRSSWAWASLIEGRDALLMEAKFQIFNGATTNIWKDNWISASNSGV 371

Query: 2788 LQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD-HPDTLIWH 2964
            ++    + +   Q V E+++     WN++L+      E +N I +  I L   PD L+W 
Sbjct: 372  IKPTCPVPITAPQLVCEIMDKPNHSWNLDLIADCLDRETINLIRSTPISLSPRPDRLVWP 431

Query: 2965 FTTAGIFTNSSTY-KMLCAKDSP----NDVSLNLSQSFWLKFWKLKMPYKFQIFLWKGLH 3129
            +   G F+  S Y +   +K+ P       S ++    W   W +K   K + FLW+ + 
Sbjct: 432  WNPNGSFSVRSGYHRFHTSKNGPLLQHTYSSHSVDAKVWKVIWNIKTLPKIKHFLWRAIS 491

Query: 3130 NALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKSLPQYFSSIVQHS 3309
             A++ +  LFR    ++  C +CN    E V+H+L  CP+   VW  S+  Y       +
Sbjct: 492  GAISSRLALFRRKLVTNPLCPICNC-FEESVEHILFLCPWTHPVWFGSVFSYRIIPNAFT 550

Query: 3310 TLLSWIQSW-QIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSNLNPNPNTVIHQIS 3486
            TL  W+     I D+P                       RC  +F   NP+P  VI + +
Sbjct: 551  TLDRWLHDMLSIPDTP--HEDFLHRFSLLSFLCWEIWKARCDFVFKGTNPDPRLVIKRAN 608

Query: 3487 -YYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDASFNPQSLIAGLS- 3660
              Y      +T          S S     ++ W PPP + +K+N D +++P +    +  
Sbjct: 609  DSYSEFWEANTCFSRLSGSRTSPSSPYVGRDRWLPPPANAIKINFDGAWSPGTSHGSIGV 668

Query: 3661 ITRNYARQYVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQVIFETDNLNIXXXXXX 3840
            I R+    +  G  +     +   AEA A L A+  A T  +++V+FE+D+         
Sbjct: 669  IARDDCGTWRGGTASPISCNSALVAEAAAALYAVSYAITRDFSKVVFESDSKVFVDSILG 728

Query: 3841 XXXXXXWQSLPIL 3879
                  W  LPIL
Sbjct: 729  NHGNYSWTILPIL 741


>ref|XP_008245529.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103343662
            [Prunus mume]
          Length = 1725

 Score =  221 bits (563), Expect = 4e-54
 Identities = 151/563 (26%), Positives = 241/563 (42%), Gaps = 8/563 (1%)
 Frame = +1

Query: 2245 ILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMDKIQRKYWW 2424
            + DKI  ++QGW+   ++Q  R   + +V  ++  Y M VF  P+   Q++D I   +WW
Sbjct: 792  VKDKILGKIQGWKHGLLSQAGREVLIKSVAQAVPSYPMSVFLFPNGFCQEIDSILANFWW 851

Query: 2425 NNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDALYGRILKG 2604
                  +  +  SW+ + +PK  GG+G ++L ++N A LAK  W +     A + ++LK 
Sbjct: 852  GQSQQSNKIHWISWKDLGMPKNEGGMGFRNLKDFNVALLAKQGWRMVTEPQAFWAQLLKS 911

Query: 2605 KYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTANWIPSMAS 2784
            KYFP  D  +        S W W SL  G  IIM  A+ QV DGS +++WT  WIP    
Sbjct: 912  KYFPNCD--FLRAGKGAKSSWAWSSLLVGRNIIMNGARWQVLDGSRVHLWTDKWIPGCTE 969

Query: 2785 ALQHWDELHLHDLQ-WVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD--HPDTL 2955
                   L   DL+  V  +I+  + +WN+  +  +F S     I+  +   D    D L
Sbjct: 970  HALQPSHLSQVDLEAKVETIIDCHSREWNLEAIGGMF-SPNAAKIIKAMPLGDGWEKDRL 1028

Query: 2956 IWHFTTAGIFTNSSTYKMLCAKDSPNDV----SLNLSQSFWLKFWKLKMPYKFQIFLWKG 3123
            IW     G +T  S Y M+        V    S  L ++ W   W  +M  K   F W+ 
Sbjct: 1029 IWPLNQTGSYTVKSGYNMIHMAHLDTSVRPSSSRILDKALWKLIWGSQMVPKLMNFWWRL 1088

Query: 3124 LHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKSLPQYFSSIVQ 3303
            +   L  +  LFR    +   C +C     E V+HL L C + + VW      Y  +   
Sbjct: 1089 VRGCLPTRDALFRRHLGTSPLCPICGE-FPESVEHLFLLCNWVRPVWFGGPLNYRINRQS 1147

Query: 3304 HSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSNLNPNPNTVIHQI 3483
             +++  W+    ++ S                        RC  IF +++  P   +   
Sbjct: 1148 ITSMSDWLMQ-ILKFSQGLGYDRKWLISQIFYSCWSIWKSRCSAIFDDISVCPRNTLLVA 1206

Query: 3484 SYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDASFNPQSLIAGLS- 3660
               ++  +L         L   +   + +   W PPP  V K+NIDAS+   +L AGL  
Sbjct: 1207 KKLMNDFNLVGCPHGDAILEEDIDDGHRVVR-WSPPPTSVYKINIDASWVSCTLQAGLGV 1265

Query: 3661 ITRNYARQYVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQVIFETDNLNIXXXXXX 3840
            + RN A  ++ G    + A +  +AEA A L+ + +A   G+  V+FE+D+  +      
Sbjct: 1266 VVRNSAGIFMGGCCGPRLASSAIEAEAHAALKGVKLAVERGFPNVVFESDSKELVQSVKG 1325

Query: 3841 XXXXXXWQSLPILRKCMNQCWEF 3909
                  W   PIL      C  F
Sbjct: 1326 NILKGRWMIYPILSAIRRHCSSF 1348



 Score = 70.1 bits (170), Expect = 2e-08
 Identities = 52/203 (25%), Positives = 80/203 (39%), Gaps = 21/203 (10%)
 Frame = +1

Query: 1597 MKIFCWNCQGIGNPHTRDYLKFCLHQYEPDIFFLSETKA*PNNMR--------------- 1731
            M    WNCQG+G+  T   L+  +    P I FL ETK   N +                
Sbjct: 1    MSYLAWNCQGLGSDLTIRSLRETIKGKRPSIVFLMETKQKQNRLTRLARDVGFDHEGSSG 60

Query: 1732 -FYLSHTR----YPHYWFYPAIGLSGGIALAWKNGVDVEIMHTTSDTIFAIIHTHDHNSD 1896
             ++LS       + H  +   +G SGG+ L W + V VE+   +   I + +        
Sbjct: 61   GYHLSRLARDVGFDHEVYADPVGTSGGLCLWWDDRVQVEVTICSKYLIDSWVTEQGSGVR 120

Query: 1897 FLVTFMYGAYNVVDNNNQWQYLLDMHSSVDLPWALLGDLNFXXXXXXXXXXXXXXXXXNN 2076
            F  +++YG+    +    W +L  +  SV  PW  +GD N                    
Sbjct: 121  FRASWVYGSPYRDEKEACWGWLDSVLGSVVFPWLCIGDFNDMLWDFEKRGGRRLDNNRRR 180

Query: 2077 II-NFVQQLGLIDLGYVGSDSTW 2142
             +  F+ +  L+DLGY GS  TW
Sbjct: 181  YLQEFLDKKELVDLGYQGSSFTW 203


>ref|XP_010673168.1| PREDICTED: uncharacterized protein LOC104889608 [Beta vulgaris subsp.
            vulgaris]
          Length = 1712

 Score =  216 bits (550), Expect = 1e-52
 Identities = 147/541 (27%), Positives = 257/541 (47%), Gaps = 7/541 (1%)
 Frame = +1

Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
            S+Q    GI+D+++ +LQGW+ K +++  +   + TV+ ++  Y M V++ P + ++ + 
Sbjct: 1121 SKQHLFSGIMDRVWKKLQGWKEKLLSRAGKEVLLKTVIQAIPTYVMGVYRFPVAIVKSIH 1180

Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
                K+WW +   +      SW+ M  PK  GG+G + LS +N A L + +W L   +D+
Sbjct: 1181 SAMAKFWWGSKGDRRPMYWKSWESMCNPKCLGGMGFRDLSVFNEALLGRQAWRLIQCEDS 1240

Query: 2581 LYGRILKGKYFP---FFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINI 2751
            L  ++LK KY+P   F D    P        + W+S+     ++ E    +VG+G+TINI
Sbjct: 1241 LLSKVLKAKYYPSSSFLDASLGPVGS-----YSWRSIWGSKSLVKEGILWRVGNGATINI 1295

Query: 2752 WTANWIPSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLI 2931
            W   W+ +  S  +      +  L++V +LI+  + +W+ N++ +LF  + + +IL   +
Sbjct: 1296 WDDPWVLNGES--RFISSGRVERLKYVCDLIDFGSMEWDANVVNELFNEQDIQAILAVPL 1353

Query: 2932 --QLDHPDTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVSLNLSQSFWLKFWKLKMPYKFQ 3105
              +L H D + W FT  G ++  + Y +  ++      +L+L    W+  W L++  K +
Sbjct: 1354 SERLPH-DRVAWAFTKDGRYSVKTAYMVGKSR------NLDLFHRAWVTIWGLQVSPKVR 1406

Query: 3106 IFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKSLPQY 3285
             FLWK   N+L V+A L     TSD  C +C  G  E + H LLHC   + VW  +    
Sbjct: 1407 HFLWKICSNSLPVRAILKHRHITSDDTCPLCLEG-PETISHALLHCSKVREVWEMA---G 1462

Query: 3286 FSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSNLNPNPN 3465
             +S + +    SW+ SW                             R KV+F +    PN
Sbjct: 1463 LTSKLPNGDGASWLDSWD-----EWQEVEKDSLVALSYVAYYVWHRRNKVVFEDW-CRPN 1516

Query: 3466 TVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKN-TWRPPPMDVLKVNIDASFNPQS 3642
              +  ++   +  +     + S  ++ S++ +NA  +  W+PPP   +K+N DAS     
Sbjct: 1517 EQVAALAMRAAADY----NEYSQHIYGSVAGQNARSSKVWQPPPAGCVKLNADASIGDDG 1572

Query: 3643 LIAGLSITRNYARQYV-VGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQVIFETDNLN 3819
             +    + RN   + +      +K    V  AE  AL  A+ +A +H    VIFETD L 
Sbjct: 1573 WVGMGVVARNEVGEVLFAASRRVKAWWPVEVAEGKALCLAIKLARSHDLQNVIFETDCLT 1632

Query: 3820 I 3822
            I
Sbjct: 1633 I 1633


>ref|XP_008378657.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 653

 Score =  215 bits (547), Expect = 3e-52
 Identities = 146/574 (25%), Positives = 256/574 (44%), Gaps = 16/574 (2%)
 Frame = +1

Query: 2218 WSRQQNS--KGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQ 2391
            W R + +    +  ++  +LQGW+  T++Q  R   +  V  ++  Y M +FK P S   
Sbjct: 9    WGRSKKAGLAYVKGRLLDKLQGWKKSTLSQAGREILIKAVAQAIPAYPMNLFKFPVSFCN 68

Query: 2392 QMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHN 2571
            +MD +  K+WW     ++  +  S +++   K  GGLGL   + +N A LAK  W L   
Sbjct: 69   EMDALITKFWWGQKLGENRIHWVSRERLGRSKEEGGLGLXSFTIFNDALLAKQCWRLISE 128

Query: 2572 QDALYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINI 2751
             + L+  +LK +YFP  +  +        + W+W SL  G +I+   A  Q+ DG+   +
Sbjct: 129  PNTLWALVLKARYFP--NXSFLDAKXGXRASWVWASLLXGREILRAGAHWQIMDGNDTRV 186

Query: 2752 WTANWIPSM-ASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNL 2928
            W   WIP +          + +     V  LI   + +W+++ L+      +V +IL +L
Sbjct: 187  WVDRWIPPIPLGRPSPLGSVQVSKNLKVKSLICPVSGEWDLDFLKPFLADSEVEAIL-DL 245

Query: 2929 IQLDH--PDTLIWHFTTAGIFTNSSTY-------KMLCAKDSPNDVSLNLSQSFWLKFWK 3081
               D    D L+W F   G ++  S Y       ++ C + +     +++  + W   WK
Sbjct: 246  XTGDPMLKDRLVWPFDKRGSYSVKSGYYWSLNRSQVRCQQPTR---LVSIPSTLWKNVWK 302

Query: 3082 LKMPYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAV 3261
            LK+P K + FLWK LH AL     L+   S+    C +CN+   E ++HL L CP+ + V
Sbjct: 303  LKVPPKIRTFLWKTLHAALATMKNLYIRRSSPSPTCPLCNS-FDESIEHLFLFCPWVEVV 361

Query: 3262 WRKSLPQYFSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIF 3441
            W         +  Q S+  SW+      ++                        RC   F
Sbjct: 362  WFGGRLNLRPNRQQVSSXASWLXQMGAAEN-GSXEVRIDRISYIAFTCWHIWKSRCDFQF 420

Query: 3442 SNLNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNID 3621
            +N    P+ V+  +S  +S +    +  +S +L +  S+ + +K  W  P   V+K+N+D
Sbjct: 421  NNQVIYPSRVVAAVSRSVSDYQGTILRQSSRSLLNHSSLGDGVK--WXHPDHGVIKINVD 478

Query: 3622 ASFNPQSLIAGLSITRNYARQ----YVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWT 3789
            A++  +S   G+  T   AR     ++       +A     AEA A+L   ++  ++GW 
Sbjct: 479  ANWEAKS---GVGFTGVVARDEQGCFLAASRQKIKATGATMAEALAILHGCNLGVSNGWN 535

Query: 3790 QVIFETDNLNIXXXXXXXXXXXXWQSLPILRKCM 3891
             +  E+D+ +             W + P+LRKC+
Sbjct: 536  SICVESDSYDAISCLWDPALKGNWDAFPVLRKCL 569


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  214 bits (546), Expect = 4e-52
 Identities = 150/545 (27%), Positives = 241/545 (44%), Gaps = 13/545 (2%)
 Frame = +1

Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
            SR +    + ++I+ R+QGW+ K +++  +   +  V  ++  + M  F++      Q+ 
Sbjct: 1016 SRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQIS 1075

Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
            K+  KYWW+N    +  +  SW K+ +PK  GGLG + +  +N A LAK  W L  + D+
Sbjct: 1076 KMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDS 1135

Query: 2581 LYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTA 2760
            L  R+L+ KYFP  D   + P  T N  + W+S+  GL+++      +VGDGS INIW  
Sbjct: 1136 LCSRVLRAKYFPLGDC--FRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWAD 1193

Query: 2761 NWIPSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD 2940
             WIP   S  +       + +  V ELI+     W+ +LL Q F  E V +I +  + ++
Sbjct: 1194 PWIPRGWSR-KPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE 1252

Query: 2941 HPDTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVSLN----------LSQSFWLKFWKLKM 3090
              D L WHF   G FT  S YK+   ++     S N              FW K WKL +
Sbjct: 1253 MEDVLAWHFDARGCFTVKSAYKV--QREMERRASRNGCPGVSNWESGDDDFWKKLWKLGV 1310

Query: 3091 PYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRK 3270
            P K + FLW+  HN L ++A L       D +CV+C    +ED  HL   C   + VW+ 
Sbjct: 1311 PGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGR-YNEDAGHLFFKCKPVKKVWQA 1369

Query: 3271 -SLPQYFSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSN 3447
             +L +  S + Q ++  + +QS   +                          R +V    
Sbjct: 1370 LNLEELRSMLEQQTSGKNVLQSIYCRPE--------NERTSAIVCLWQWWKERNEVREGG 1421

Query: 3448 LNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDAS 3627
            +  +P  + H I           V +         S R      WR PP++ +K+N D +
Sbjct: 1422 IPRSPAELSHLIMSQAGEFVRMNVKEK--------SPRTGECAVWRRPPLNFVKINTDGA 1473

Query: 3628 FNPQSLIAGLSITRNYARQYVVGKGAIKRAI--NVHQAEAWALLEAMDMASTHGWTQVIF 3801
            ++      G           V+  GA   A   +   AE  A   A+  AS  G +++  
Sbjct: 1474 YSSNMKQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIEL 1533

Query: 3802 ETDNL 3816
            ETD++
Sbjct: 1534 ETDSM 1538


>ref|XP_008367096.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 924

 Score =  213 bits (541), Expect = 1e-51
 Identities = 138/571 (24%), Positives = 247/571 (43%), Gaps = 23/571 (4%)
 Frame = +1

Query: 2245 ILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMDKIQRKYWW 2424
            + D++  ++QGW+  T++   +   +  V+ ++  Y M +FK P +   ++D I   +WW
Sbjct: 315  VKDRVLEKVQGWKQSTLSSAGKEVLIKAVIQAIPAYPMNIFKFPANFCNELDSIISNFWW 374

Query: 2425 NNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDALYGRILKG 2604
             +   +   +  S   M +PK  GGLG +   ++N A LAK  W L H++ +L+ R++K 
Sbjct: 375  GHNGNKRRIHWVSKNIMGLPKAEGGLGFRSFRDFNDALLAKQCWRLLHDKHSLWARVMKA 434

Query: 2605 KYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTANWIPSM-- 2778
            +YFP     +        + W W SL  G  ++++ +  Q+ +G  + +W   W+P++  
Sbjct: 435  RYFP--HCSFLDAKRGGRASWAWSSLLSGRDLLLBESHWQIFNGKXVRVWLDRWLPTLPV 492

Query: 2779 ASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD-HPDTL 2955
               L   D + +     VS L+      W+I+ L+   ++ +  +I    I +    D L
Sbjct: 493  GHPLPRGD-VQVSRNTPVSXLLSPEXDGWDIDFLKPFISAXEFVAIQETQIGVPCLDDRL 551

Query: 2956 IWHFTTAGIFTNSSTYKMLCAK-----DSPNDVSLNLSQSFWLKFWKLKMPYKFQIFLWK 3120
            +W F   G++T  S Y  + AK     +  +  S+ +    W   W L  P K ++FLWK
Sbjct: 552  VWPFDRXGLYTVKSGYHCVHAKREQRVNFGSSSSVTVPGKLWKAIWNLNTPPKLRVFLWK 611

Query: 3121 GLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKSLPQYFSSIV 3300
             +HNAL   A LFR +      C +C     E ++HL L CP+ + +W       F  ++
Sbjct: 612  TVHNALATLAGLFRRLVAPSPLCPICQI-HEETIEHLFLLCPWVEVIW-------FGGML 663

Query: 3301 QHSTLLSWIQSWQ------IQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSNLNPNP 3462
             H  + S I SW          +                        RC  +F N + NP
Sbjct: 664  SHRIIRSSISSWVNWLVNITNTTLNSKAEMXRVLSYVAFTCWHIWKSRCNFLFQNGSINP 723

Query: 3463 NTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKN-------TWRPPPMDVLKVNID 3621
              V+  I         DT V        +  +R ++ N        W  PP   +K+N+D
Sbjct: 724  RNVLAAI---------DTSVSAFSEASRNKVIRPSMPNPAAQVPARWCLPPPPFVKINVD 774

Query: 3622 ASFNPQSLIAGLS--ITRNYARQYVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQV 3795
            AS+      +G S  + R+ A  ++  +     A +    EA A+    ++    G+  +
Sbjct: 775  ASWE-XGTXSGFSGVVVRDSAGTFIAARRGCFAAHSAAVXEAIAIRHGCELGVAMGFNLI 833

Query: 3796 IFETDNLNIXXXXXXXXXXXXWQSLPILRKC 3888
            + E+D+ +             W++ P+L KC
Sbjct: 834  VIESDSQDSISYLMGKTSNGRWEAFPVLTKC 864


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  213 bits (541), Expect = 1e-51
 Identities = 149/545 (27%), Positives = 241/545 (44%), Gaps = 13/545 (2%)
 Frame = +1

Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
            SR +    + ++I+ R+QGW+ K +++  +   +  V  ++  + M  F++      Q+ 
Sbjct: 989  SRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQIS 1048

Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
            K+  KYWW+N    +  +  SW K+ +PK  GGLG + +  +N A LAK  W L  + D+
Sbjct: 1049 KMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDS 1108

Query: 2581 LYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTA 2760
            L  R+L+ KYFP  D   + P  T N  + W+S+  GL+++      ++GDGS INIW  
Sbjct: 1109 LCSRVLRAKYFPLGDC--FRPKQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWAD 1166

Query: 2761 NWIPSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD 2940
             WIP   S  +       + +  V ELI+     W+ +LL Q F  E V +I +  + ++
Sbjct: 1167 PWIPRGWSR-KPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE 1225

Query: 2941 HPDTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVSLN----------LSQSFWLKFWKLKM 3090
              D L WHF   G FT  S YK+   ++     S N              FW K WKL +
Sbjct: 1226 MEDVLAWHFDARGCFTVKSAYKV--QREMERRASRNGCPGVSNWESGDDDFWKKLWKLGV 1283

Query: 3091 PYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRK 3270
            P K + FLW+  HN L ++A L       D +CV+C    +ED  HL   C   + VW+ 
Sbjct: 1284 PGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGR-YNEDAGHLFFKCKPVKKVWQA 1342

Query: 3271 -SLPQYFSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSN 3447
             +L +  S + Q ++  + +QS   +                          R +V    
Sbjct: 1343 LNLEELRSMLEQQTSGKNVLQSIYCRPE--------IERTSAIVCLWQWWKERNEVREGG 1394

Query: 3448 LNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDAS 3627
            +  +P  + H I           V +         S R      WR PP++ +K+N D +
Sbjct: 1395 IPRSPAELSHLIMSQAGEFVRMNVKEK--------SPRTGECAVWRRPPLNFVKINTDGA 1446

Query: 3628 FNPQSLIAGLSITRNYARQYVVGKGAIKRAI--NVHQAEAWALLEAMDMASTHGWTQVIF 3801
            ++      G           V+  GA   A   +   AE  A   A+  AS  G +++  
Sbjct: 1447 YSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIEL 1506

Query: 3802 ETDNL 3816
            ETD++
Sbjct: 1507 ETDSM 1511


>ref|XP_009375083.1| PREDICTED: uncharacterized protein LOC103963932 [Pyrus x
            bretschneideri]
          Length = 1815

 Score =  208 bits (529), Expect = 4e-50
 Identities = 145/582 (24%), Positives = 255/582 (43%), Gaps = 27/582 (4%)
 Frame = +1

Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
            S+++    +  ++  +LQGW+  T+++  +   +  V+ ++  Y M +FK P +  +++D
Sbjct: 1198 SKKRGLAYVKGRVMEKLQGWKQNTLSRAGKEVLIKAVIQAIPAYPMCIFKFPGAVCKELD 1257

Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
             +   +WW      H  +  S   + +PK  GGLG ++   +N A LAK  W L    D+
Sbjct: 1258 ALVAGFWWGCKEGAHKIHWVSKGVLGLPKDMGGLGFRNFQEFNEALLAKQCWRLITEPDS 1317

Query: 2581 LYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTA 2760
            L+ +++K +YFP   +  +       + W W SL  G  ++ E +  Q+  G  + +W  
Sbjct: 1318 LWAKVIKARYFPHSSI--WDAKKGGRASWAWSSLICGRGLVREGSHWQILGGQEVRVWQD 1375

Query: 2761 NWIPSMASALQHWD---ELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSI-LTNL 2928
             W+PS+   L H +   ++ +     VS LI   + +WNIN L+   + E + +I  T L
Sbjct: 1376 RWLPSL--PLGHPEPVGQVAVTPSLRVSALICPESGRWNINFLQPFISEEAMQAIEETPL 1433

Query: 2929 IQLDHPDTLIWHFTTAGIFTNSSTY-----KMLCAKDSPNDVSLNLSQSFWLKFWKLKMP 3093
              L   D LIW  +  G ++  S Y     + L  +D        + ++FW   WKL++P
Sbjct: 1434 GDLSRKDRLIWDTSKNGAYSVKSGYRWLQGRSLVRRDLRRPSVRGVPKAFWKGIWKLEVP 1493

Query: 3094 YKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVW--- 3264
             K + FLW  +HN L  +  LFR  S+    C +C     E ++H+ L C + + +W   
Sbjct: 1494 PKLRHFLWLTVHNCLPTRDALFRRRSSQTSTCPIC-CCHDETIEHIFLSCSWVEPIWFGG 1552

Query: 3265 -------RKSLPQY-------FSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXX 3402
                   R SLP +       FS  + +S  + W QS+ +                    
Sbjct: 1553 ALGYKMDRPSLPSWSDWIQGVFSPNLCNSGDIMWRQSYIV------------------FT 1594

Query: 3403 XXXXXXXRCKVIFSNLNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTW 3582
                   RC  +F  +  NP  V+  IS   +V    +              RN+    W
Sbjct: 1595 CWCIWKARCDFVFKEVPINPLKVLAAISE--AVRSFISAKAKDGERGGGEGRRNSQVTRW 1652

Query: 3583 RPPPMDVLKVNIDASFNPQSLIAGLS-ITRNYARQYVVGKGAIKRAINVHQAEAWALLEA 3759
              P    +K+N+DAS++  S +  +  I R+   ++V        A +   AEA+ALL  
Sbjct: 1653 CAPTYPFVKINVDASWSKASKMGFVGVIVRDMESKFVAAARHPINAPSAAAAEAYALLHG 1712

Query: 3760 MDMASTHGWTQVIFETDNLNIXXXXXXXXXXXXWQSLPILRK 3885
              + +  G   VI E+D+L+             W++ P+L +
Sbjct: 1713 CRLGAELGVRYVILESDSLDAIKCLSSSLSMGSWEAYPVLAR 1754



 Score = 82.4 bits (202), Expect = 3e-12
 Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
 Frame = +1

Query: 1594 SMKIFCWNCQGIGNPHTRDYLKFCLHQYEPDIFFLSETKA*PNNMRFYLSHTRYPHYWFY 1773
            +M    WNC+G+G+  T   L   + +  P + FLSETK   + +        Y H +  
Sbjct: 435  AMSYIFWNCRGLGSNTTVRALHGLIRKKRPSMIFLSETKMKDHRILGVRRRLGYVHGFDV 494

Query: 1774 PAIGLSGGIALAWKNGVDVEIMHTTSDTIFAIIHTHDHNSDFLVTFMYGAYNVVDNNNQW 1953
              IG +GG++L W++ ++V I+ ++  TI A++           T +YG    V+ N  W
Sbjct: 495  SPIGSAGGLSLWWEDNLEVNIIFSSKHTIDAVMRIKGQTHWSRFTGVYGTPYRVEKNLFW 554

Query: 1954 QYLLDMHSSVDLPWALLGDLN-FXXXXXXXXXXXXXXXXXNNIINFVQQLGLIDLGYVGS 2130
            +++++  +  D+PW   GD N F                   +  F+    LIDLG+ G 
Sbjct: 555  EWMVNYFTPTDIPWICGGDFNEFLWDHEKSGGVEVLYNRPRFLEEFLSSSQLIDLGFNGP 614

Query: 2131 DSTW 2142
              TW
Sbjct: 615  AFTW 618


>ref|XP_008225175.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 583

 Score =  207 bits (528), Expect = 5e-50
 Identities = 140/518 (27%), Positives = 232/518 (44%), Gaps = 10/518 (1%)
 Frame = +1

Query: 2356 MQVFKIPDSTIQQMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAA 2535
            M  F+ P+ T  +++     +WW N    +  +  SW+K+ V K+ GGLG + LS++N A
Sbjct: 1    MTCFRFPEGTCNEINSDLANFWWGNSTEGNGLHWKSWKKLGVSKKSGGLGFRDLSSFNLA 60

Query: 2536 FLAKMSWNLTHNQDALYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENA 2715
             LAK +W +  N  +++ +IL+ +YFP     +        S W W SL  G   ++  A
Sbjct: 61   LLAKQAWRIVQNPQSIWAQILQARYFP--HCNFLQAKKGSRSSWAWASLIEGRDALLMEA 118

Query: 2716 K*QVGDGSTINIWTANWI-PSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLF 2892
            K Q+ +G+T NIW  NWI  S +  ++    + +   Q V E+++     WN++L+    
Sbjct: 119  KFQIFNGATTNIWKDNWISASNSGVIKPTCPVPITAPQLVCEIMDKPNHSWNLDLIADCL 178

Query: 2893 TSEQVNSILTNLIQLD-HPDTLIWHFTTAGIFTNSSTY-KMLCAKDSP----NDVSLNLS 3054
              E +N I +  I L   PD L+W +   G F+  S Y +   +K+ P       S ++ 
Sbjct: 179  DRETINLIRSTPISLSPRPDRLVWPWNPDGSFSVRSGYHRFHTSKNGPLLQHTYSSHSVD 238

Query: 3055 QSFWLKFWKLKMPYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLL 3234
               W   W +K   K + FLW+ +  A++ +  LFR    ++  C +CN    E V+H+L
Sbjct: 239  AKVWKVIWNIKTLPKIKHFLWRAISGAISSRLALFRRKLVTNPLCPICNC-FEESVEHIL 297

Query: 3235 LHCPFAQAVWRKSLPQYFSSIVQHSTLLSWIQSW-QIQDSPXXXXXXXXXXXXXXXXXXX 3411
              CP+   VW  S+  Y       +TL  W+     I D+P                   
Sbjct: 298  FLCPWTHPVWFGSVFSYRIIPNAFTTLDRWLHDMLSIPDTP--HEDFLHRFSLLSFLCWE 355

Query: 3412 XXXXRCKVIFSNLNPNPNTVIHQIS-YYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRP 3588
                RC  +F   NP+P  VI + +  Y      +T          S S     ++ W P
Sbjct: 356  IWKARCDFVFKGTNPDPRLVIKRANDSYSEFWEANTCFSRLSGSRTSPSSPYVGRDRWLP 415

Query: 3589 PPMDVLKVNIDASFNPQSLIAGLS-ITRNYARQYVVGKGAIKRAINVHQAEAWALLEAMD 3765
            PP + +K+N D +++P +    +  I R+    +  G  +     +   AEA A L A+ 
Sbjct: 416  PPANAIKINFDGAWSPGTSHGSIGVIARDDCGTWRGGTASPISCNSALVAEAAAALYAVS 475

Query: 3766 MASTHGWTQVIFETDNLNIXXXXXXXXXXXXWQSLPIL 3879
             A T  +++V+FE+D+               W  LPIL
Sbjct: 476  YAITRDFSKVVFESDSKVFVDSILGNHGNYSWTILPIL 513


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  206 bits (524), Expect = 1e-49
 Identities = 117/374 (31%), Positives = 183/374 (48%), Gaps = 10/374 (2%)
 Frame = +1

Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
            SR +    + ++I+ R+QGW+ K +++  +   +  V   +  + M  F++      Q+ 
Sbjct: 961  SRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQIS 1020

Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
            K+  KYWW+N    +  +  SW K+ +PK  GGLG + +  +N A LAK  W L  + D+
Sbjct: 1021 KMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDS 1080

Query: 2581 LYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTA 2760
            L  R+L+ KYFP  D   + P  T N  + W+S+  GL+++      +VGDGS INIW  
Sbjct: 1081 LCSRVLRAKYFPLGDC--FRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWAD 1138

Query: 2761 NWIPSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD 2940
             WIP   S  +       + +  V ELI+     W+ +LL Q F  E V +I +  + ++
Sbjct: 1139 PWIPRGWSR-KPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE 1197

Query: 2941 HPDTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVSLN----------LSQSFWLKFWKLKM 3090
              D L WHF   G FT  S YK+   ++     S N              FW K WKL +
Sbjct: 1198 MEDVLAWHFDARGCFTVKSAYKV--QREMERRASRNGCPGVSNWESGDDDFWKKLWKLGV 1255

Query: 3091 PYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRK 3270
            P K + FLW+  HN L ++A L       D +CV+C    +ED  HL   C   + VW+ 
Sbjct: 1256 PGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGR-YNEDAGHLFFKCKPVKKVWQA 1314

Query: 3271 SLPQYFSSIVQHST 3312
               +   S+++  T
Sbjct: 1315 LNLEELRSMLEQQT 1328


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  206 bits (524), Expect = 1e-49
 Identities = 117/374 (31%), Positives = 183/374 (48%), Gaps = 10/374 (2%)
 Frame = +1

Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
            SR +    + ++I+ R+QGW+ K +++  +   +  V   +  + M  F++      Q+ 
Sbjct: 957  SRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQIS 1016

Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
            K+  KYWW+N    +  +  SW K+ +PK  GGLG + +  +N A LAK  W L  + D+
Sbjct: 1017 KMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDS 1076

Query: 2581 LYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTA 2760
            L  R+L+ KYFP  D   + P  T N  + W+S+  GL+++      +VGDGS INIW  
Sbjct: 1077 LCSRVLRAKYFPLGDC--FRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWAD 1134

Query: 2761 NWIPSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD 2940
             WIP   S  +       + +  V ELI+     W+ +LL Q F  E V +I +  + ++
Sbjct: 1135 PWIPRGWSR-KPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE 1193

Query: 2941 HPDTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVSLN----------LSQSFWLKFWKLKM 3090
              D L WHF   G FT  S YK+   ++     S N              FW K WKL +
Sbjct: 1194 MEDVLAWHFDARGCFTVKSAYKV--QREMERRASRNGCPGVSNWESGDDDFWKKLWKLGV 1251

Query: 3091 PYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRK 3270
            P K + FLW+  HN L ++A L       D +CV+C    +ED  HL   C   + VW+ 
Sbjct: 1252 PGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGR-YNEDAGHLFFKCKPVKKVWQA 1310

Query: 3271 SLPQYFSSIVQHST 3312
               +   S+++  T
Sbjct: 1311 LNLEELRSMLEQQT 1324


>ref|XP_008226782.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 963

 Score =  206 bits (523), Expect = 2e-49
 Identities = 138/564 (24%), Positives = 243/564 (43%), Gaps = 10/564 (1%)
 Frame = +1

Query: 2218 WSRQQNSK--GILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQ 2391
            W R + +    I D++  +++GW+  +++   +   +  V +++  Y M  FK P S   
Sbjct: 338  WGRSKRAALDYIKDRVRRKIEGWKQSSLSLAGKEILLKAVATAIPAYPMSCFKFPASVCS 397

Query: 2392 QMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHN 2571
             ++    ++WW N       +  +W+ +   K  GGLG +H S++N A LAK SW +  N
Sbjct: 398  DINGEMTRFWWKNGEEGSKIHWKAWESLCKSKDEGGLGFRHFSSFNIALLAKQSWRILQN 457

Query: 2572 QDALYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINI 2751
             +A + RILK +Y+P  D  +        + W W SL  G   ++++++ Q+ DG   NI
Sbjct: 458  PNASWVRILKARYYP--DCDFLKAKKGSRASWAWSSLLEGRDALIKDSRCQIFDGKNTNI 515

Query: 2752 WTANWIPSMASALQHWDELHLHDL-QWVSELIELSAAQWNINLLRQLFTSEQVNSI-LTN 2925
            W   W+P     +    E+      Q V E++E     W + L++       +  I    
Sbjct: 516  WKDIWLPPPHDGIIKVREIVPPSAPQQVYEIMEKETHSWKLELIKPYVQPRTLEIIRCCT 575

Query: 2926 LIQLDHPDTLIWHFTTAGIFTNSSTYKMLCAKDS-----PNDVSLNLSQSFWLKFWKLKM 3090
            +   +  D ++W +TT G ++  S Y+ + ++ S         S ++ +  W+  WK++ 
Sbjct: 576  IANTERQDKMVWPWTTNGAYSVKSRYRRIHSRCSYLIHATGSTSHSIPKEVWVCIWKIES 635

Query: 3091 PYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRK 3270
              K ++FLW+ L NA++ +  L+R        C +C     E ++HLL  CP+   VW  
Sbjct: 636  LPKIKMFLWRVLSNAISTRWNLYRRKILDSPVCPICGM-EEETIEHLLFLCPWTNVVWFG 694

Query: 3271 SLPQYFSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSNL 3450
            +   Y   +   S++  W++   I                           RC  IF + 
Sbjct: 695  APLNYKVDLRGFSSVDRWLKG-VINFQGVSKREVQFLLTSISFICWEIWKTRCNFIFKSN 753

Query: 3451 NPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDASF 3630
            + +P   I +         LD  V +      +  V N L   WRPP  + +K+N D ++
Sbjct: 754  HIDPRLTIDRAMQNCR-EFLDAKVKSHVPFGDASVVPNILAQGWRPPMSNYVKINFDGAW 812

Query: 3631 NPQSLIAGLSITRNYARQYVVGKGAIKRAINVH-QAEAWALLEAMDMASTHGWTQVIFET 3807
               S +AGL +    A     G  A     N+   AEA A L A+  A  H +T +I ET
Sbjct: 813  KKDSHLAGLGVVARDAIGSFCGGLATPFHCNLALVAEAAAGLCALKFALNHNFTNIILET 872

Query: 3808 DNLNIXXXXXXXXXXXXWQSLPIL 3879
            ++  +            W   P+L
Sbjct: 873  NSKILVEGVRGGGKNGVWAIQPLL 896


>ref|XP_008352230.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 775

 Score =  200 bits (508), Expect = 1e-47
 Identities = 140/573 (24%), Positives = 244/573 (42%), Gaps = 15/573 (2%)
 Frame = +1

Query: 2218 WSRQQNS--KGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQ 2391
            W R + +    +  ++  +LQGW+  T++Q  R   +  V  ++  Y M +FK P S   
Sbjct: 89   WGRSKKAGLAYVKGRLLDKLQGWKKSTLSQAGREILIKAVAQAIPAYPMNLFKFPVSFCN 148

Query: 2392 QMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHN 2571
            +MD +  K WW     ++  +  S +++   K  GGLGL+  S  N A LAK  W L   
Sbjct: 149  EMDALIAKXWWGQKLGENRIHWVSXERLGRSKEEGGLGLRSFSIXNDALLAKQCWRLISE 208

Query: 2572 QDALYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINI 2751
             + L+  +LK +YFP  +  +        + W+W SL    +I+   A  Q+ DG+   +
Sbjct: 209  PNTLWALVLKARYFP--NCSFLDAKKGGRASWVWASLLAXREILRAGAHWQIMDGNDTRV 266

Query: 2752 WTANWIPSMASALQH-WDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNL 2928
            W   WIP +          + +     V  LI   + +W+++ L+      +V  IL   
Sbjct: 267  WVDRWIPPIPLGRPSPLGSVXVSKNLKVKSLICPVSGEWDLDFLKPFLADSEVEXILD-- 324

Query: 2929 IQLDHP---DTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVS----LNLSQSFWLKFWKLK 3087
            +    P   D L+W F   G ++  S Y     +           +++  + W   WKLK
Sbjct: 325  LHTGDPTLKDRLVWPFEKRGSYSVKSGYYWSLNRSQVRCQQSIRLVSIPSTLWKTVWKLK 384

Query: 3088 MPYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWR 3267
            +P K + F+WK LH AL     L+   S+    C +CN+   E ++HL L CP  + VW 
Sbjct: 385  VPPKIRTFMWKTLHAALATMKNLYIRRSSPSPTCXLCNS-FDESIEHLFLFCPXVEVVWF 443

Query: 3268 KSLPQYFSSIVQHSTLLSW-IQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFS 3444
                    +  Q S+  SW +Q  + ++                         RC+  F+
Sbjct: 444  GGRLNLRPNRQQVSSWASWLVQMGEAENGSAEVRIDRISYIAFTCWHXWKS--RCEFQFN 501

Query: 3445 NLNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDA 3624
            N    P+ V+  +   +  +       +S +L +  S+   +   W PP   V+K+N+ A
Sbjct: 502  NQVIYPSRVVAXVXRSVXDYQGTIFRXSSRSLLNQXSLGAGVX--WSPPDHGVIKINVXA 559

Query: 3625 SFNPQSLIAGLSITRNYARQ----YVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQ 3792
            S+  +S   G+  T   AR     ++       +      AEA A++   ++  ++GW  
Sbjct: 560  SWEAKS---GVGFTGVVARDEQGCFLAASRHKIKXTGAXMAEALAIMHGCNLGVSNGWNS 616

Query: 3793 VIFETDNLNIXXXXXXXXXXXXWQSLPILRKCM 3891
            +  E+D+ +             W + P+LRKC+
Sbjct: 617  ICVESDSYDAISCLRDPAKKGNWDAFPVLRKCL 649


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score =  199 bits (507), Expect = 1e-47
 Identities = 107/351 (30%), Positives = 183/351 (52%), Gaps = 10/351 (2%)
 Frame = +1

Query: 2251 DKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMDKIQRKYWWNN 2430
            D+I+ R+QGW+ K +++  +   +  V  ++  + M  F +     +Q+ K+  +YWW+N
Sbjct: 9    DRIWQRIQGWKEK-LSRTGKEVLIKAVAQAIPTFAMGCFDLTKDICEQISKMIARYWWSN 67

Query: 2431 YNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDALYGRILKGKY 2610
               ++  +  SW+K+  PK  GGLG + +  +N A LAK  W L  N ++L  ++LK KY
Sbjct: 68   QEKENKMHWLSWEKLTEPKWAGGLGFRDIHAFNLAMLAKQGWRLIQNPESLCAQVLKAKY 127

Query: 2611 FPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTANWIPSMASAL 2790
            +P  ++  +      N  + W+S+C GL  + +    +VG+G+ INIW+  WIPS     
Sbjct: 128  YPSGNI--FSAKKCANMSYTWRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPS-DHTR 184

Query: 2791 QHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLDHPDTLIWHFT 2970
            +       + +  V ELI+ S   W++ LL Q F  E VN I T  + ++  D L WH+ 
Sbjct: 185  RPITPRGRNLVTRVEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMDDMLAWHYD 244

Query: 2971 TAGIFTNSSTYKMLCAKDSP----NDVSLNLS------QSFWLKFWKLKMPYKFQIFLWK 3120
              G+F+  S YK+   +D         S  LS      + +W K WK+++P K + F+W+
Sbjct: 245  EKGLFSVKSAYKV--QRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWR 302

Query: 3121 GLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKS 3273
              HN L ++  L +     D +C++CN   +ED  HL   C   + VW+++
Sbjct: 303  FSHNILALRVNLQQRGMDLDSRCIICNR-MNEDAGHLFFKCKKVKKVWQEN 352


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score =  199 bits (507), Expect = 1e-47
 Identities = 107/351 (30%), Positives = 183/351 (52%), Gaps = 10/351 (2%)
 Frame = +1

Query: 2251 DKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMDKIQRKYWWNN 2430
            D+I+ R+QGW+ K +++  +   +  V  ++  + M  F +     +Q+ K+  +YWW+N
Sbjct: 902  DRIWQRIQGWKEK-LSRTGKEVLIKAVAQAIPTFAMGCFDLTKDICEQISKMIARYWWSN 960

Query: 2431 YNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDALYGRILKGKY 2610
               ++  +  SW+K+  PK  GGLG + +  +N A LAK  W L  N ++L  ++LK KY
Sbjct: 961  QEKENKMHWLSWEKLTEPKWAGGLGFRDIHAFNLAMLAKQGWRLIQNPESLCAQVLKAKY 1020

Query: 2611 FPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTANWIPSMASAL 2790
            +P  ++  +      N  + W+S+C GL  + +    +VG+G+ INIW+  WIPS     
Sbjct: 1021 YPSGNI--FSAKKCANMSYTWRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPS-DHTR 1077

Query: 2791 QHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLDHPDTLIWHFT 2970
            +       + +  V ELI+ S   W++ LL Q F  E VN I T  + ++  D L WH+ 
Sbjct: 1078 RPITPRGRNLVTRVEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMDDMLAWHYD 1137

Query: 2971 TAGIFTNSSTYKMLCAKDSP----NDVSLNLS------QSFWLKFWKLKMPYKFQIFLWK 3120
              G+F+  S YK+   +D         S  LS      + +W K WK+++P K + F+W+
Sbjct: 1138 EKGLFSVKSAYKV--QRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWR 1195

Query: 3121 GLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKS 3273
              HN L ++  L +     D +C++CN   +ED  HL   C   + VW+++
Sbjct: 1196 FSHNILALRVNLQQRGMDLDSRCIICNR-MNEDAGHLFFKCKKVKKVWQEN 1245


>ref|XP_008385035.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 992

 Score =  199 bits (506), Expect = 2e-47
 Identities = 140/573 (24%), Positives = 245/573 (42%), Gaps = 15/573 (2%)
 Frame = +1

Query: 2218 WSRQQNS--KGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQ 2391
            W R + +    +  ++  +LQGW+  T++Q  R   +  V  ++  Y M +FK P S   
Sbjct: 373  WGRSKKAGLAYVKGRLLDKLQGWKKSTLSQXGREILIKXVAQAIPAYPMNLFKFPVSFCN 432

Query: 2392 QMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHN 2571
            +MD +  K WW     ++  +  S +++   K   GLGL+  S  N A LAK  W L   
Sbjct: 433  EMDALIAKXWWGXXLGENRIHWVSXERLGRSKEEXGLGLRSFSIXNDALLAKQCWRLIXE 492

Query: 2572 QDALYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINI 2751
             + L+  +LK +YFP  +  +        + W+W SL    +I+   A  Q+ DG+   +
Sbjct: 493  PNTLWALVLKARYFP--NCSFLDAKKGGRASWVWASLLAXREILRAGAHWQIMDGNDTRV 550

Query: 2752 WTANWIPSMASALQH-WDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNL 2928
            W   WIP +          + +     V  LI   + +W+++ L+      +V  IL   
Sbjct: 551  WVDRWIPPIPLGRPSPLGSVXVSKNLKVKSLICPVSGEWDLDFLKPFLADSEVEXILD-- 608

Query: 2929 IQLDHP---DTLIWHFTTAGIFTNSSTYKMLCAKDSPNDVS----LNLSQSFWLKFWKLK 3087
            +    P   D L+W F   G ++  S Y     +           +++  + W   WKLK
Sbjct: 609  LHTGDPTLKDRLVWPFEKRGSYSVKSGYYWSLNRSQVRCQQSIRLVSIPSTLWKTVWKLK 668

Query: 3088 MPYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWR 3267
            +P K + F+WK LH AL     L+   S+    C +CN+   E ++HL L CP  + VW 
Sbjct: 669  VPPKIRTFMWKTLHAALATMKNLYIRRSSPSPTCXLCNS-FDESIEHLFLFCPXVEVVWF 727

Query: 3268 KSLPQYFSSIVQHSTLLSW-IQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFS 3444
                    +  Q S+  SW +Q  + ++                         RC+  F+
Sbjct: 728  GGRLNLRPNRQQVSSWASWLVQMGEAENGSAEVRIDRISYIAFTCWHXWKS--RCEFQFN 785

Query: 3445 NLNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNIDA 3624
            N    P+ V+  +   +  +       +S +L +  S+   ++  W PP   V+K+N+ A
Sbjct: 786  NQVIYPSRVVAXVXRSVXDYQGTIFRXSSRSLLNQSSLGAGVQ--WSPPDHGVIKINVXA 843

Query: 3625 SFNPQSLIAGLSITRNYARQ----YVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQ 3792
            S+  +S   G+  T   AR     ++       +A     AEA A++   ++  ++GW  
Sbjct: 844  SWEAKS---GVGFTGVVARDEQGCFLAASRHKIKATGAXMAEALAIMHGCNLGVSNGWNS 900

Query: 3793 VIFETDNLNIXXXXXXXXXXXXWQSLPILRKCM 3891
            +  E+D+ +             W + P+LRKC+
Sbjct: 901  ICVESDSYDAISCLRDPAKKGNWDAFPVLRKCL 933


>ref|XP_007210228.1| hypothetical protein PRUPE_ppa015539mg [Prunus persica]
            gi|462405963|gb|EMJ11427.1| hypothetical protein
            PRUPE_ppa015539mg [Prunus persica]
          Length = 787

 Score =  198 bits (504), Expect = 3e-47
 Identities = 110/357 (30%), Positives = 179/357 (50%), Gaps = 9/357 (2%)
 Frame = +1

Query: 2221 SRQQNSKGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMD 2400
            SR+Q    + ++I+ ++QGW++K ++   +   +  V  ++ +Y M  F IP     ++ 
Sbjct: 355  SRRQCFNSLKERIWKKIQGWKAKLLSFAGKEILLKVVAQAVPIYMMNCFLIPKCLCDEIQ 414

Query: 2401 KIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDA 2580
            ++   YWW   + Q   +  SW K+ +PK+ GGLG ++L  +N A LAK  W L    ++
Sbjct: 415  QVMAHYWWGEQDGQRKIHWLSWNKLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNS 474

Query: 2581 LYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTA 2760
            L  RILK +YF   +          +  ++WQSLC    +I + ++ ++G+G ++ IW  
Sbjct: 475  LVARILKARYFK--NCSILEAQIGHSPSYIWQSLCKARVLIEKGSRWRIGNGHSVRIWGD 532

Query: 2761 NWIPSMASALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSILTNLIQLD 2940
             W+P+  S      +    D   V+ LI     QW  NLL+  F++E+VN I    +   
Sbjct: 533  RWLPNSESFQVSSPQAEGFDEAKVNSLINPVTVQWKENLLQAWFSAEEVNCIRNIPLSFR 592

Query: 2941 H-PDTLIWHFTTAGIFTNSSTYKM---LCAKDSPNDVSLN-----LSQSFWLKFWKLKMP 3093
            H PD LIWHF   G +T  S +++   +  +   +D ++N       +  W K WK ++P
Sbjct: 593  HPPDILIWHFERDGQYTVRSGHEVARRVLLRQDGDDTNMNGGPIVACEQVWKKIWKARVP 652

Query: 3094 YKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVW 3264
             K  IF+W+ L N L  K  L     +    CV C  G  E V H+LL CP A A W
Sbjct: 653  PKVLIFIWRALLNILPTKDNLIHRSISELGGCVFC--GAEETVAHVLLRCPMAIASW 707


>ref|XP_010054376.1| PREDICTED: uncharacterized protein LOC104442671 [Eucalyptus grandis]
          Length = 1509

 Score =  198 bits (503), Expect = 4e-47
 Identities = 149/572 (26%), Positives = 238/572 (41%), Gaps = 17/572 (2%)
 Frame = +1

Query: 2245 ILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQQMDKIQRKYWW 2424
            IL ++  +++GW+   +++  +   + TV+ ++  Y M VFKIP S  + ++K   ++WW
Sbjct: 905  ILGRVNSKMEGWKENLISKGGKEVLIKTVVQAIPQYVMSVFKIPISICKSIEKKIARFWW 964

Query: 2425 NNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHNQDALYGRILKG 2604
             N   +   +   W  +K  K  GGLG + L  +N A L K +W L     +L+ ++ K 
Sbjct: 965  QNDCRKAGIHWKQWDVLKYTKALGGLGFRDLVAFNKAMLGKQAWRLIQQPSSLWSKLFKA 1024

Query: 2605 KYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINIWTANWIP-SMA 2781
             YFP  D +Y          W WQSL    ++I+ N +  VGDG  INI    W+P  + 
Sbjct: 1025 IYFPAQDFRYAHKG--VRPSWGWQSLLSSREVILPNLQWSVGDGKNINIREDRWLPRGIV 1082

Query: 2782 SALQHWDELHLHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSIL-----TNLIQLDHP 2946
                + +E  L     V+EL+  ++  WN+  L   +  +    IL      NL Q    
Sbjct: 1083 GGPANREEPSL-----VAELLVQNSNHWNLATLNNFYDEQTTAEILRIPVRRNLTQ---- 1133

Query: 2947 DTLIWHFTTAGIFTNSSTY-----KMLCAKDSPNDVSLNLSQSFWLKFWKLKMPYKFQIF 3111
            D L+W  TT G +T  S Y       +C        S       W   W +K+P K ++F
Sbjct: 1134 DKLVWTETTNGQYTIRSAYHSVRKASICKLTRQASSSYQQPPQLWKCIWSVKLPPKLKVF 1193

Query: 3112 LWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAVWRKSLPQYFS 3291
             W   HNAL  K  LFR   T D  C +C     E ++HL L CP+  A+W  S P    
Sbjct: 1194 FWSVCHNALPTKENLFRRRITPDPICPLCTLNQPESIEHLFLLCPWTTAIW--SHPTI-- 1249

Query: 3292 SIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIFSNLNPNPNTV 3471
            +I   +T +  I  W +                           R   IFS   P+P   
Sbjct: 1250 NIHIDTTTVRRIDEWIV--DRILHKKSKPDLELFIAVCWQVWKARNGAIFSKHQPDP--- 1304

Query: 3472 IHQISYYISVHHLDTVVDNSHTLHHSLSVRNA----LKNTWRPPPMDVLKVNIDASFNPQ 3639
                  +  VH     V ++    HSL  +      L + W+PP    L++NID ++   
Sbjct: 1305 ------HFGVHAAFAQVRSAAICDHSLMTKPKQSVDLGHFWQPPAPGTLRINIDGAYTSG 1358

Query: 3640 SLIAGLS-ITRNYARQYVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQVIFETD-N 3813
                 ++ I R+ +     G     +A +  Q EA AL+ A+      G      E D +
Sbjct: 1359 HTEGSIAFICRDKSGCLQEGLTRSVQAASALQTEAQALIFALCHLLQQGKMSTSLEIDSD 1418

Query: 3814 LNIXXXXXXXXXXXXWQSLPILRKCMNQCWEF 3909
              +            W+  P++ + ++ C +F
Sbjct: 1419 CLLLVDALNNQQEPPWEIRPLVYEAVDLCRQF 1450


>ref|XP_008346916.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 1007

 Score =  197 bits (500), Expect(2) = 7e-47
 Identities = 137/546 (25%), Positives = 237/546 (43%), Gaps = 13/546 (2%)
 Frame = +1

Query: 2218 WSRQQNS--KGILDKIYHRLQGWQSKTVNQEWRTTQVNTVLSSMGMYQMQVFKIPDSTIQ 2391
            W R +N     +  +I  +LQGW+  T+++  +   +  V+ ++  Y M +FK P     
Sbjct: 370  WGRXKNRGLAYVKGRIAGKLQGWKQSTLSKAGKEVLIKAVVQAIPAYPMNIFKFPAVVCD 429

Query: 2392 QMDKIQRKYWWNNYNTQHAPNLFSWQKMKVPKRYGGLGLKHLSNYNAAFLAKMSWNLTHN 2571
             +D +   +WW         +  S + + +PK  GG+G K    +N A LAK  W L   
Sbjct: 430  DLDALVAGFWWGKAGGGGKIHWVSKEVLGLPKNIGGMGFKSFKEFNDALLAKQCWRLICE 489

Query: 2572 QDALYGRILKGKYFPFFDLQYYPPADTKNSRWLWQSLCYGLQIIMENAK*QVGDGSTINI 2751
             ++L+ R++K +YFP     +   +    + W W SL  G  +I++    Q+  G  + +
Sbjct: 490  PNSLWARVIKARYFP--HCSFLEASKGGRASWAWSSLLSGRDVILQGTHWQILGGEDVRV 547

Query: 2752 WTANWIPSMASALQHWDELH----LHDLQWVSELIELSAAQWNINLLRQLFTSEQVNSI- 2916
            W   W+PS+   L H   L       +L+ V +L    + +W++N L+   T  +  +I 
Sbjct: 548  WVDRWLPSL--LLGHPVPLGXVAVTRNLR-VCKLFCPLSREWDLNFLQPFXTDVEXETIR 604

Query: 2917 LTNLIQLDHPDTLIWHFTTAGIFTNSSTY-----KMLCAKDSPNDVSLNLSQSFWLKFWK 3081
             T +      D LIW  +  G ++  S Y     + LC +DS    + ++ +  W   WK
Sbjct: 605  ATPIGDSSRRDRLIWAASKNGRYSVKSGYRWIQSRSLCLRDSRLPHARSVPEELWKCLWK 664

Query: 3082 LKMPYKFQIFLWKGLHNALTVKARLFRHMSTSDQQCVVCNTGTSEDVDHLLLHCPFAQAV 3261
            +++P K + FLW  LHNAL  K  LF+  +++   C +C     E   H+ L CP+ + V
Sbjct: 665  IEVPPKIRHFLWSSLHNALATKVNLFKRGASNSPICPIC-LCDDESTVHIFLLCPWVKHV 723

Query: 3262 WRKSLPQYFSSIVQHSTLLSWIQSWQIQDSPXXXXXXXXXXXXXXXXXXXXXXXRCKVIF 3441
            W   +  Y       S+   W+Q+     +                        RC  +F
Sbjct: 724  WFGGVLSYKVDGXAISSWFLWLQA-IFSSNFGAPDDGMWVRSCVAFTCWFIWKARCDFVF 782

Query: 3442 SNLNPNPNTVIHQISYYISVHHLDTVVDNSHTLHHSLSVRNALKNTWRPPPMDVLKVNID 3621
            + +   P+ V+  IS  +              L   +   +     W PP     K+N+D
Sbjct: 783  NXVKIIPSRVVXAISSAMDSFLAAGRSXEVCGLRXGVGQASXPVVCWTPPDPPFSKINVD 842

Query: 3622 ASFNPQSLIAGLS-ITRNYARQYVVGKGAIKRAINVHQAEAWALLEAMDMASTHGWTQVI 3798
            AS+   SL+  +  + R+   Q++       +A N   AEA ALL    +  T G ++VI
Sbjct: 843  ASWCRMSLVGFVGVVVRSAEGQFIAAARYSIKASNAAAAEALALLHGCKLGVTLGLSEVI 902

Query: 3799 FETDNL 3816
             E+D+L
Sbjct: 903  IESDSL 908



 Score = 21.9 bits (45), Expect(2) = 7e-47
 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 2147 KHLFDL---FGQASVQVISMQKYTIFFGLDS 2230
            +HL  L   +  AS Q ++MQK +++FG ++
Sbjct: 310  RHLVKLLRDYCDASGQEVNMQKSSMYFGANT 340


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