BLASTX nr result

ID: Papaver30_contig00034067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00034067
         (503 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    58   3e-06
gb|KHN13479.1| hypothetical protein glysoja_029580, partial [Gly...    57   5e-06

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
 Frame = +1

Query: 10  IIKEIWMTAACATMKDLWFQINKQFFEEVKPNYNAFKWRIYKTIQEGSYRM---KGNKWS 180
           +++ +  +A    M  +W + N ++F+ V+   +     I   +   S+ +   KG    
Sbjct: 160 MVQHVMNSAIVHIMWSIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFMLDIVKGASSM 219

Query: 181 QDYDNHVLSFFKIGDRRIRYNCIKEISWTAPETDCILFCCAGISFGDPGKAGIGVTARDC 360
           QD+   +   F I  +  R N  +EI W  P   C+   C G   G P    IGV  R  
Sbjct: 220 QDFK--LARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRAS 277

Query: 361 KSQVLGTLIGGIGVSPTSIAGEY-AVLCALEWAAYMECSKIIIQSDSI 501
           ++   G     IG + T++  EY A + A+E A  +  + I I++DS+
Sbjct: 278 QTMFCGAFAQNIGYA-TALEAEYSACMFAIEKAKELHLTNIWIETDSV 324


>gb|KHN13479.1| hypothetical protein glysoja_029580, partial [Glycine soja]
          Length = 172

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 39/148 (26%), Positives = 65/148 (43%)
 Frame = +1

Query: 58  LWFQINKQFFEEVKPNYNAFKWRIYKTIQEGSYRMKGNKWSQDYDNHVLSFFKIGDRRIR 237
           +WF  N++ F     +++     I+  IQ   ++ KG+  +  ++  +L  F I     +
Sbjct: 14  IWFCRNEKIFNNKSMHFDQACNMIFSVIQLSGFKSKGSMSNFVHELSILKAFSINIHPCK 73

Query: 238 YNCIKEISWTAPETDCILFCCAGISFGDPGKAGIGVTARDCKSQVLGTLIGGIGVSPTSI 417
              IKE+ W AP+   I     G + G PG  G G   RD    + G     IG+  +  
Sbjct: 74  AKYIKEVLWRAPQLGTIKCNIDGFAHGSPGHVGSGGIFRDHWGGMPGCFSSYIGIQNSLF 133

Query: 418 AGEYAVLCALEWAAYMECSKIIIQSDSI 501
           A   A++ ALE A       + I+ DS+
Sbjct: 134 AKICAIILALEVAKDKGWLNLWIEYDSV 161