BLASTX nr result

ID: Papaver30_contig00032195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00032195
         (442 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010315461.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    69   1e-09
ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    67   4e-09
ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    67   4e-09
emb|CDP18669.1| unnamed protein product [Coffea canephora]             67   5e-09
gb|KMZ58649.1| DNA-directed RNA polymerase [Zostera marina]            65   2e-08

>ref|XP_010315461.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V
           subunit 1 [Solanum lycopersicum]
          Length = 1968

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 47/111 (42%), Positives = 58/111 (52%)
 Frame = +3

Query: 36  LDAKG*FP*EWYILQKLPVPPNFLSVPDIVDELLSNLYSKLLPIFFFIDCVYV*LLSFS* 215
           L AKG FP E YILQ LPVPPN LSVPDI D   +N+ S                     
Sbjct: 198 LSAKGYFPQEGYILQYLPVPPNCLSVPDISDG--NNIMS--------------------- 234

Query: 216 *TWQYIKSGNLFKDIFV*MLKKVLKLAEINKSSRSGPPNFKSHDVEAKELR 368
                        D  + ML+KVL+  +I KSSRSG PNF++H+VEA +L+
Sbjct: 235 ------------SDHSITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQ 273


>ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V
           subunit 1 [Nicotiana sylvestris]
          Length = 2055

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 46/111 (41%), Positives = 58/111 (52%)
 Frame = +3

Query: 36  LDAKG*FP*EWYILQKLPVPPNFLSVPDIVDELLSNLYSKLLPIFFFIDCVYV*LLSFS* 215
           L AKG FP + YILQ LPVPPN LSVPDI D   +N+ S                     
Sbjct: 197 LSAKGYFPQDGYILQYLPVPPNCLSVPDISDG--NNIMS--------------------- 233

Query: 216 *TWQYIKSGNLFKDIFV*MLKKVLKLAEINKSSRSGPPNFKSHDVEAKELR 368
                        D  + ML+KVL+  +I KSSRSG PNF++H+VEA +L+
Sbjct: 234 ------------SDHSITMLRKVLRQIDIIKSSRSGIPNFEAHEVEANDLQ 272


>ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V
           subunit 1 [Nicotiana tomentosiformis]
          Length = 1983

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 46/111 (41%), Positives = 58/111 (52%)
 Frame = +3

Query: 36  LDAKG*FP*EWYILQKLPVPPNFLSVPDIVDELLSNLYSKLLPIFFFIDCVYV*LLSFS* 215
           L AKG FP + YILQ LPVPPN LSVPDI D   +N+ S                     
Sbjct: 197 LSAKGYFPQDGYILQYLPVPPNCLSVPDISDG--NNIMS--------------------- 233

Query: 216 *TWQYIKSGNLFKDIFV*MLKKVLKLAEINKSSRSGPPNFKSHDVEAKELR 368
                        D  + ML+KVL+  +I KSSRSG PNF++H+VEA +L+
Sbjct: 234 ------------SDHSITMLRKVLRQIDIIKSSRSGIPNFEAHEVEANDLQ 272


>emb|CDP18669.1| unnamed protein product [Coffea canephora]
          Length = 1946

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 47/121 (38%), Positives = 60/121 (49%)
 Frame = +3

Query: 36  LDAKG*FP*EWYILQKLPVPPNFLSVPDIVDELLSNLYSKLLPIFFFIDCVYV*LLSFS* 215
           L AKG FP + YILQ LPVPPN LSVPDI D   +N+ S                     
Sbjct: 195 LSAKGYFPQDGYILQYLPVPPNCLSVPDISDG--TNVMS--------------------- 231

Query: 216 *TWQYIKSGNLFKDIFV*MLKKVLKLAEINKSSRSGPPNFKSHDVEAKELRNTFKLRVEL 395
                       KD  + +LK+ LK  E+ K+SRSG PNF+SH +EA +L+ +     E 
Sbjct: 232 ------------KDHSLSLLKRALKQIEVIKNSRSGMPNFESHQIEANDLQISVAQYFEF 279

Query: 396 R 398
           R
Sbjct: 280 R 280


>gb|KMZ58649.1| DNA-directed RNA polymerase [Zostera marina]
          Length = 2065

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 43/121 (35%), Positives = 56/121 (46%)
 Frame = +3

Query: 36  LDAKG*FP*EWYILQKLPVPPNFLSVPDIVDELLSNLYSKLLPIFFFIDCVYV*LLSFS* 215
           L AKG  P   YILQ +PVPPN L VPDI D                             
Sbjct: 201 LTAKGHIPQYGYILQSIPVPPNCLHVPDISDG---------------------------- 232

Query: 216 *TWQYIKSGNLFKDIFV*MLKKVLKLAEINKSSRSGPPNFKSHDVEAKELRNTFKLRVEL 395
                    ++  DI + MLKKVL   ++ K SRSGPPNF+SH +E+ +L+ +    + L
Sbjct: 233 -------KSSMCNDISIPMLKKVLNKVDLIKKSRSGPPNFESHMIESNDLQVSIAQYMRL 285

Query: 396 R 398
           R
Sbjct: 286 R 286


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