BLASTX nr result

ID: Papaver30_contig00029604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00029604
         (631 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010270055.1| PREDICTED: zinc finger CCCH domain-containin...    58   5e-06
ref|XP_010270053.1| PREDICTED: zinc finger CCCH domain-containin...    58   5e-06

>ref|XP_010270055.1| PREDICTED: zinc finger CCCH domain-containing protein 57 isoform X3
           [Nelumbo nucifera]
          Length = 345

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
 Frame = -3

Query: 137 MPDSWKVKIN--------ASPDNLQEAMWRLKIQAQNG--GVVANSSLYPDRPGE 3
           MPD+W+ + N        AS DNL+++MWRLKIQ  +   GV ANSS YPDRPGE
Sbjct: 1   MPDNWQAQNNGVSTSFNNASADNLEDSMWRLKIQPHDNQEGVAANSSPYPDRPGE 55


>ref|XP_010270053.1| PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X1
           [Nelumbo nucifera]
          Length = 450

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
 Frame = -3

Query: 137 MPDSWKVKIN--------ASPDNLQEAMWRLKIQAQNG--GVVANSSLYPDRPGE 3
           MPD+W+ + N        AS DNL+++MWRLKIQ  +   GV ANSS YPDRPGE
Sbjct: 1   MPDNWQAQNNGVSTSFNNASADNLEDSMWRLKIQPHDNQEGVAANSSPYPDRPGE 55


Top