BLASTX nr result

ID: Papaver30_contig00029491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00029491
         (1468 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN86556.1| papaver rhoeas pollen S [Papaver rhoeas]               78   2e-11
emb|CAN86557.1| papaver rhoeas pollen S [Papaver rhoeas]               61   2e-06

>emb|CAN86556.1| papaver rhoeas pollen S [Papaver rhoeas]
          Length = 192

 Score = 78.2 bits (191), Expect = 2e-11
 Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
 Frame = +2

Query: 650  RSGLVLKLFWLCSLLIRITGGATTIWMANRVFSV-YTTSSVILILGITSSLAIYSGGIIL 826
            RSG V+ LF     L  + G +  I     +F+  YT   +I+++ + +   I  G I L
Sbjct: 3    RSGSVVTLFQFVGGLCTLLGVSVAI---KAIFAQDYTLKDLIILIVLVALSIILGGPITL 59

Query: 827  FKQLLTEFVKHQQG-KEERRWFVVICIMGLCEGFLDENTILPFIIISIVSMFTICILTNG 1003
                L   V H+    E+++W V      +C+  L    +LP  I S +S   IC++  G
Sbjct: 60   TCVKLLGLVLHRLSFSEDQKWVVAFGTAAICDVLLVPKNMLPMTIFSFLSSIMICVVAVG 119

Query: 1004 WDYDRTGVSDGLAVTYALRMVLFLTNSEPALHLITCGLTLAFVVTSKFTEPPLE 1165
            WD DR+G+++G  V +   ++++L   +    L+ CG  L   V +KFTE   E
Sbjct: 120  WDCDRSGMTEGFLVGFGKLLLVYLIKQDFTFSLL-CGSVLCLAVVAKFTEGKAE 172


>emb|CAN86557.1| papaver rhoeas pollen S [Papaver rhoeas]
          Length = 193

 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 2/170 (1%)
 Frame = +2

Query: 650  RSGLVLKLFWLCSLLIRITGGATTIWMANRVFSVYTTSSVILILGITSSLAIYSGGIIL- 826
            R  +V+ +F   +  + + G A  I     +   YT   +I+ + +  ++A+  G  I  
Sbjct: 3    RHAIVVHVFQFLAGFVTLFGSALAIRTV--ISHPYTLQDLIIFI-LLFAIAVLVGKYITI 59

Query: 827  -FKQLLTEFVKHQQGKEERRWFVVICIMGLCEGFLDENTILPFIIISIVSMFTICILTNG 1003
             + +LL   ++H    E ++W V      +C+ FL    + P   I  +S   IC++  G
Sbjct: 60   TYLKLLGWVLQHLTVTENQKWVVAFGTTAVCDVFLVTTNMTPVTSICFLSSIMICVVAAG 119

Query: 1004 WDYDRTGVSDGLAVTYALRMVLFLTNSEPALHLITCGLTLAFVVTSKFTE 1153
            WD DR+G+++G  + +  +++L     E     +  G  L   + +KFTE
Sbjct: 120  WDRDRSGMTEGFLIGFG-KLLLVNLIREDCTASVMYGSVLFLAIVAKFTE 168


Top